Rorug05G0594000

Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0002770
Physical Location & Seq
Forward (+)
79214776 .. 79217469
2694 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0594000.1

Sequence Viewer

Length: 2694 bp
ATGGGGTTATCATCTCTATGTTTAGCATTTCTGTCAATATTTATCCTTTCAAAACTTGTCTTGTCACATCTTGTGGTGGCTGACGTTTTGCAGTCATTTACTCCTCCTTGCCATGATGACGAGATCTCTGCCTTGCTGCAATTTAAGCAAAGTTTTGTCATTAACATGTCTGCTTCAGATTATGAAGGTGCTTATCCAAAATTTTTTTCATGGAAATCAAACAGCAATTGTTGCTCATGGGACGGGGTCGATTGTGATGAGGAGACTCGTCATGTGATTGGACTTGATCTTAGTAGCAGTCGTCTCTATGGCTCTATCAACTCCAACAGCACCCTCTTCCGCCTTGTTCATCTTGAGAGCCTCAACCTTGCTGACAATCATTTCGATTCTCAAATTCCTCCTACTGTTAGGAACTTTCCAAAGCTCAGGTATCTCAACCTCTCTTACTCTGCCTTTTCTGGTCAAGTCCCGCGTGAAGTTTCACAATTGACGAAGTTGTTATCCCTTGATCTATCTCACAATGGGGATATGTTTTTGAATGAAAAATTGTTAAGAAGCCTAGCTCAAAATTTAACTGGCCTAGAAACACTCGATCTTTCTTTCATTAATATATCATCCACAGTACCTAATACCTTGTCCAATTTGTCACATTTGACATCCCTCGTCCTAAATTCATGCGGCCTGTTCGGCAAATTACCATTTTCTCTTGGTAATCTCAGACATCTCATCTTTTTGGAGCTTTCAGATAATCAGTTCAATGGCCAGATTCCTTCTTCATTTGCGAATCTTACCCAACTCACATATCTTTCACTTGGGGAGAACCATATTAATGGCACTATCCCATGTTTTCTCGGAAATCTTACCCAGCTTGCAACACTTCGTCTTAATTCAAATCAATTATCTGGTCCAATCCTATCTAGTCTAGGTAATCTTGGCAAACTTACTGTTCTAGATCTTAATTTCAATAAATTTCAAAGAGAGATTCCTGAGTCATTATTCAATGTAGCAAGTCTCAAGAGACTTTTTCTAGCTCATAATAATCTCAGTGGTACAGTGGAGTTCCTCAAACTTCTTAAGCTACCAAATTTAAAGCGGGTAGATCTATCTGGTAGCAACTTGGATGTGATCACTGAAACCAGAACTATGAATGCATCTAGCATTCCAAGGTTAGAGCATCTAGGGTTGAGTTCTTGCAACATAAAAGAGTTCCCAAATTTCCTAAGATATCAAGATACATTAAGGTACTTGAACCTTTCTTGGAACGGAATGCATGGCCAAGTACCGAAATGGATGTGGAACACAAGCAGAGAGTCTTTGCGGTTTTTGGACATTTCTCATAACCTCCTTTCAGGCTTTGACCAGCCTCCGGTTGTCCTTCCCTGGGTTAAACTTCGTGGGCTAGATCTTTCGTTCAACAGGCTTAGTGGGCCATTGTTGGTACCTCCGTTACAATACATCCAATTCTATCACATTTCAAACAACAAATTGACTGGAGAAATTTCACCTTTGATTTGTAATGCGAGTATTCTTATTTCCCTTGATGTGTCAAATAACCATTTGAGTGGTATGCTGCCGCAGTGTCTAGAAAACTTTAGTTGTCTTATAGTTTTAAGTGCTGGAAACAATTATTTTCATGGCACTCTTCCTCATATAGGCACCAATGGAAGCCATTTGAGAATGATTGATGTCAGTCGTAACCAACTGCAGGGGAAATTACCGAGGTCATTGGCGAATTGTTTGAAGCTCGAGTCTCTAGTTCTGTCGAGCAATAAGTTCGATGATGTATTCCCCGTTTGGTTGGGAGCTCTTTCAGAATTAAAAGTTTTGGCAATGAGGAATAGTGGGTTCCACGGTGCTATTCCGAGACATCAAAGCAATCATGATGGTTTCCCCGATTTGCGCATCCTTGATCTGTCTCAAAATAATTTTACCGGTCAGTTTGCATTTGAATTCATCCTCTATGGAGAATCAATGAGAGGTATCCATCTAAACGGATCGGAGTACATGACAGCATTTAGATTCACGATTCATGAAAACCAGCATGATTGGTATCTTATAGCTAGGTACAGATTTGAGTACTCAATCACGCTGATGAATAAAGGTTTAGAGAGATACTTCCAAAAGGTTCGTGAAGACTTCATGGCCATCGATCTGTCGAGCAATAGATTTGACGGCAAGATTCCAGAATTTATTGGGAACCTAAAGGGGCTTCGCTCACTTAATGTATCCAATAACATTCTAACTAGCCGCATCCCACCATCCTTGGGAAACTTAACAAATCTTGAAGCTTTGGACCTTTCACATAACAACTTCTTGGGTGAGATCCCTCCATCACTGTTGCAGCTTTCATTCCTCCAAATTTTCAGCGTCTCGCACAACAATCTCACAGGTCGAATACCGGTTGGAAACCAGTTTAGTACCTTCGAAGTCACTTCATATGAGGGCAACCCAGGTTTGTGTGGAGTTCCATTGCCAAAGAAATGTTCACGTCCTGAACTTCGTCTACCTTCAACAGCAGAAGAAGAAGATGGAGTTGAATTGGATTGGAAATTTGCTGCGGCGGGGTTAGTGAGTGGGTTGGTGGTGGGAGTGGTTCTTGCAGACTTTGTGATCACGAGGTTCAGTGAGCGGTTCATTGAGATTGTTGCATTGCTGATCAGACTGATGAAAGGGATGAGAAGGCCCAGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAC2

Protein Analysis

897

Amino Acids

100.5

Weight (kDa)

6.96

Isoelectric Point (pI)

38.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 38 - 86 6.8e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 95 - 221 8.5e-08 Leucine-rich repeat region
LRR_8 PF13855 117 - 174 2.5e-07 Leucine rich repeat
LRR_14 PF23598 211 - 395 2.8e-18 Leucine-rich repeat region
LRR_8 PF13855 715 - 771 3.6e-07 Leucine rich repeat
LRR_4 PF12799 736 - 777 1.6e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1901
Acc65I GGTACC 1 cut(s) 1438
AccB1I GGYRCC 2 cut(s) 1438, 1655
AccBSI CCGCTC 1 cut(s) 2629
AccI GTMKAC 1 cut(s) 2503
AccII CGCG 1 cut(s) 472
AclWI GGATC 2 cut(s) 2002, 2317
AcoI YGGCCR 3 cut(s) 760, 1273, 2142
AcuI CTGAAG 1 cut(s) 159
AfaI GTAC 9 cut(s) 624, 1051, 1244, 1281, 1440, 2003, 2066, 2078, 2419
AfiI CCNNNNNNNGG 5 cut(s) 1366, 1381, 1652, 1705, 2264
AflII CTTAAG 1 cut(s) 1073
AflIII ACRYGT 1 cut(s) 165
AgeI ACCGGT 2 cut(s) 1931, 2398
AjiI CACGTC 1 cut(s) 2489
AjnI CCWGG 2 cut(s) 1379, 2449
AjuI GAANNNNNNNTTGG 4 cut(s) 190, 222, 2467, 2499
Alw21I GWGCWC 1 cut(s) 1807
Alw26I GTCTC 8 cut(s) 257, 308, 1012, 1016, 1755, 1858, 1920, 2374
AlwI GGATC 2 cut(s) 2002, 2317
Ama87I CYCGRG 1 cut(s) 1745
AoxI GGCC 7 cut(s) 577, 679, 760, 1273, 1427, 2142, 2681
ApeKI GCWGC 4 cut(s) 136, 1570, 2341, 2555
ArsI GACNNNNNNTTYG 2 cut(s) 365, 397
AseI ATTAAT 2 cut(s) 606, 828
AsiGI ACCGGT 2 cut(s) 1931, 2398
Asp718I GGTACC 1 cut(s) 1438
AspLEI GCGC 1 cut(s) 1902
AspS9I GGNCC 4 cut(s) 905, 1427, 2293, 2682
AsuHPI GGTGA 2 cut(s) 1494, 2330
AsuII TTCGAA 1 cut(s) 2424
AvaI CYCGRG 1 cut(s) 1745
AvaII GGWCC 2 cut(s) 905, 2293
BaeI ACNNNNGTAYC 2 cut(s) 1430, 1463
BalI TGGCCA 3 cut(s) 762, 1275, 2144
BanI GGYRCC 2 cut(s) 1438, 1655
BanII GRGCYC 1 cut(s) 1807
BauI CACGAG 1 cut(s) 2614
BbsI GAAGAC 1 cut(s) 2139
Bbv12I GWGCWC 1 cut(s) 1807
BbvI GCAGC 4 cut(s) 123, 1557, 2353, 2542
BccI CCATC 6 cut(s) 1877, 1992, 2153, 2266, 2338, 2522
BceAI ACGGC 1 cut(s) 2188
BcgI CGANNNNNNTGC 4 cut(s) 110, 144, 1756, 1790
BciT130I CCWGG 2 cut(s) 1381, 2451
BciVI GTATCC 2 cut(s) 1991, 2236
BclI TGATCA 3 cut(s) 1125, 2610, 2655
BcoDI GTCTC 8 cut(s) 257, 308, 1012, 1016, 1755, 1858, 1920, 2374
BfmI CTRYAG 1 cut(s) 1703
BfrI CTTAAG 1 cut(s) 1073
BfuI GTATCC 2 cut(s) 1991, 2236
BglI GCCNNNNNGGC 1 cut(s) 687
BglII AGATCT 4 cut(s) 123, 952, 1099, 1402
BisI GCNGC 8 cut(s) 137, 679, 1571, 1574, 2248, 2342, 2556, 2559
BlsI GCNGC 8 cut(s) 138, 680, 1572, 1575, 2249, 2343, 2557, 2560
BmcAI AGTACT 1 cut(s) 2078
Bme1390I CCNGG 2 cut(s) 1381, 2451
Bme18I GGWCC 2 cut(s) 905, 2293
BmeT110I CYCGRG 1 cut(s) 1745
BmgBI CACGTC 1 cut(s) 2489
BmgT120I GGNCC 4 cut(s) 905, 1427, 2293, 2682
BmiI GGNNCC 4 cut(s) 1440, 1657, 1847, 2198
BmrFI CCNGG 2 cut(s) 1381, 2451
BmsI GCATC 4 cut(s) 1160, 1183, 1911, 2259
BpiI GAAGAC 1 cut(s) 2139
BpmI CTGGAG 1 cut(s) 1512
Bpu10I CCTNAGC 1 cut(s) 425
Bpu14I TTCGAA 1 cut(s) 2424
BpuEI CTTGAG 2 cut(s) 374, 998
Bsa29I ATCGAT 1 cut(s) 2148
BsaBI GATNNNNATC 1 cut(s) 2049
BsaJI CCNNGG 7 cut(s) 1163, 1379, 1380, 1718, 1849, 2262, 2449
BsaWI WCCGGW 3 cut(s) 1366, 1931, 2398
Bsc4I CCNNNNNNNGG 5 cut(s) 1366, 1381, 1652, 1705, 2264
Bse118I RCCGGY 2 cut(s) 1931, 2398
Bse1I ACTGG 3 cut(s) 580, 1495, 2410
Bse3DI GCAATG 3 cut(s) 1836, 2468, 2648
Bse8I GATNNNNATC 1 cut(s) 2049
BseBI CCWGG 2 cut(s) 1381, 2451
BseCI ATCGAT 1 cut(s) 2148
BseDI CCNNGG 7 cut(s) 1163, 1379, 1380, 1718, 1849, 2262, 2449
BseJI GATNNNNATC 1 cut(s) 2049
BseLI CCNNNNNNNGG 5 cut(s) 1366, 1381, 1652, 1705, 2264
BseMI GCAATG 3 cut(s) 1836, 2468, 2648
BseMII CTCAG 4 cut(s) 439, 730, 978, 1057
BseNI ACTGG 3 cut(s) 580, 1495, 2410
BseRI GAGGAG 2 cut(s) 93, 275
BseXI GCAGC 4 cut(s) 123, 1557, 2353, 2542
BseYI CCCAGC 1 cut(s) 864
Bsh1236I CGCG 1 cut(s) 472
BshFI GGCC 7 cut(s) 579, 681, 762, 1275, 1429, 2144, 2683
BshNI GGYRCC 2 cut(s) 1438, 1655
BshTI ACCGGT 2 cut(s) 1931, 2398
BshVI ATCGAT 1 cut(s) 2148
BsiHKAI GWGCWC 1 cut(s) 1807
BsiHKCI CYCGRG 1 cut(s) 1745
BsiSI CCGG 3 cut(s) 1367, 1932, 2399
BslFI GGGAC 2 cut(s) 254, 452
BslI CCNNNNNNNGG 5 cut(s) 1366, 1381, 1652, 1705, 2264
BsmAI GTCTC 8 cut(s) 257, 308, 1012, 1016, 1755, 1858, 1920, 2374
BsmBI CGTCTC 2 cut(s) 308, 2374
BsmFI GGGAC 2 cut(s) 254, 452
BsmI GAATGC 3 cut(s) 1153, 1158, 1272
BsnI GGCC 7 cut(s) 579, 681, 762, 1275, 1429, 2144, 2683
BsoBI CYCGRG 1 cut(s) 1745
Bsp119I TTCGAA 1 cut(s) 2424
Bsp1286I GDGCHC 1 cut(s) 1807
BspANI GGCC 7 cut(s) 579, 681, 762, 1275, 1429, 2144, 2683
BspCNI CTCAG 4 cut(s) 438, 729, 979, 1056
BspDI ATCGAT 1 cut(s) 2148
BspFNI CGCG 1 cut(s) 472
BspHI TCATGA 2 cut(s) 1879, 2029
BspLI GGNNCC 4 cut(s) 1440, 1657, 1847, 2198
BspMAI CTGCAG 1 cut(s) 1707
BspPI GGATC 2 cut(s) 2002, 2317
BspT104I TTCGAA 1 cut(s) 2424
BspT107I GGYRCC 2 cut(s) 1438, 1655
BspTI CTTAAG 1 cut(s) 1073
BsrBI CCGCTC 1 cut(s) 2629
BsrDI GCAATG 3 cut(s) 1836, 2468, 2648
BsrFI RCCGGY 2 cut(s) 1931, 2398
BsrI ACTGG 3 cut(s) 580, 1495, 2410
BssAI RCCGGY 2 cut(s) 1931, 2398
BssECI CCNNGG 7 cut(s) 1163, 1379, 1380, 1718, 1849, 2262, 2449
BssSI CACGAG 1 cut(s) 2614
BssT1I CCWWGG 2 cut(s) 1163, 2262
Bst2BI CACGAG 1 cut(s) 2614
Bst2UI CCWGG 2 cut(s) 1381, 2451
Bst4CI ACNGT 6 cut(s) 406, 622, 946, 1054, 1853, 2337
Bst6I CTCTTC 2 cut(s) 341, 1647
BstAFI CTTAAG 1 cut(s) 1073
BstAPI GCANNNNNTGC 1 cut(s) 231
BstBI TTCGAA 1 cut(s) 2424
BstC8I GCNNGC 1 cut(s) 870
BstDEI CTNAG 7 cut(s) 290, 425, 716, 987, 1043, 1220, 1421
BstDSI CCRYGG 1 cut(s) 1849
BstENI CCTNNNNNAGG 1 cut(s) 1650
BstFNI CGCG 1 cut(s) 472
BstHHI GCGC 1 cut(s) 1902
BstMAI GTCTC 8 cut(s) 257, 308, 1012, 1016, 1755, 1858, 1920, 2374
BstMWI GCNNNNNNNGC 4 cut(s) 145, 231, 687, 1426
BstNI CCWGG 2 cut(s) 1381, 2451
BstNSI RCATGY 1 cut(s) 169
BstSCI CCNGG 2 cut(s) 1379, 2449
BstSFI CTRYAG 1 cut(s) 1703
BstUI CGCG 1 cut(s) 472
BstV1I GCAGC 4 cut(s) 123, 1557, 2353, 2542
BstV2I GAAGAC 1 cut(s) 2139
BstX2I RGATCY 5 cut(s) 123, 952, 1099, 1402, 2322
BstXI CCANNNNNNTGG 2 cut(s) 830, 1562
BstYI RGATCY 5 cut(s) 123, 952, 1099, 1402, 2322
Bsu15I ATCGAT 1 cut(s) 2148
BsuI GTATCC 2 cut(s) 1991, 2236
BsuRI GGCC 7 cut(s) 579, 681, 762, 1275, 1429, 2144, 2683
BsuTUI ATCGAT 1 cut(s) 2148
BtgI CCRYGG 1 cut(s) 1849
BtrI CACGTC 1 cut(s) 2489
BtsI GCAGTG 1 cut(s) 1583
BtsIMutI CAGTG 6 cut(s) 1051, 1059, 1128, 1583, 2333, 2629
Cac8I GCNNGC 1 cut(s) 870
CciI TCATGA 2 cut(s) 1879, 2029
CfoI GCGC 1 cut(s) 1902
Cfr10I RCCGGY 2 cut(s) 1931, 2398
Cfr13I GGNCC 4 cut(s) 905, 1427, 2293, 2682
ClaI ATCGAT 1 cut(s) 2148
CseI GACGC 1 cut(s) 2356
Csp6I GTAC 9 cut(s) 623, 1050, 1243, 1280, 1439, 2002, 2065, 2077, 2418
CspAI ACCGGT 2 cut(s) 1931, 2398
CspCI CAANNNNNGTGG 2 cut(s) 2244, 2279
CviQI GTAC 9 cut(s) 623, 1050, 1243, 1280, 1439, 2002, 2065, 2077, 2418
DdeI CTNAG 7 cut(s) 290, 425, 716, 987, 1043, 1220, 1421
DraI TTTAAA 1 cut(s) 1089
EaeI YGGCCR 3 cut(s) 760, 1273, 2142
Eam1104I CTCTTC 2 cut(s) 341, 1647
EarI CTCTTC 2 cut(s) 341, 1647
EciI GGCGGA 1 cut(s) 329
Ecl136II GAGCTC 1 cut(s) 1805
Eco130I CCWWGG 2 cut(s) 1163, 2262
Eco24I GRGCYC 1 cut(s) 1807
Eco32I GATATC 1 cut(s) 1226
Eco47I GGWCC 2 cut(s) 905, 2293
Eco53kI GAGCTC 1 cut(s) 1805
Eco57I CTGAAG 1 cut(s) 159
Eco88I CYCGRG 1 cut(s) 1745
EcoICRI GAGCTC 1 cut(s) 1805
EcoNI CCTNNNNNAGG 1 cut(s) 1650
EcoRI GAATTC 1 cut(s) 1949
EcoRII CCWGG 2 cut(s) 1379, 2449
EcoRV GATATC 1 cut(s) 1226
EcoT14I CCWWGG 2 cut(s) 1163, 2262
EcoT22I ATGCAT 2 cut(s) 1153, 1272
EcoT38I GRGCYC 1 cut(s) 1807
ErhI CCWWGG 2 cut(s) 1163, 2262
Esp3I CGTCTC 2 cut(s) 308, 2374
FaqI GGGAC 2 cut(s) 254, 452
FauI CCCGC 3 cut(s) 477, 1086, 2554
FauNDI CATATG 1 cut(s) 2437
FbaI TGATCA 3 cut(s) 1125, 2610, 2655
FblI GTMKAC 1 cut(s) 2503
Fnu4HI GCNGC 8 cut(s) 137, 679, 1571, 1574, 2248, 2342, 2556, 2559
FriOI GRGCYC 1 cut(s) 1807
Fsp4HI GCNGC 8 cut(s) 137, 679, 1571, 1574, 2248, 2342, 2556, 2559
FspI TGCGCA 1 cut(s) 1901
GlaI GCGC 1 cut(s) 1901
GluI GCNGC 8 cut(s) 137, 679, 1571, 1574, 2248, 2342, 2556, 2559
GsaI CCCAGC 1 cut(s) 868
GsuI CTGGAG 1 cut(s) 1512
HaeIII GGCC 7 cut(s) 579, 681, 762, 1275, 1429, 2144, 2683
HapII CCGG 3 cut(s) 1367, 1932, 2399
HgaI GACGC 1 cut(s) 2356
HhaI GCGC 1 cut(s) 1902
Hin6I GCGC 1 cut(s) 1900
HinP1I GCGC 1 cut(s) 1900
HindIII AAGCTT 1 cut(s) 2286
HpaII CCGG 3 cut(s) 1367, 1932, 2399
HphI GGTGA 2 cut(s) 1494, 2330
Hpy166II GTNNAC 2 cut(s) 2486, 2504
Hpy188I TCNGA 8 cut(s) 178, 719, 745, 854, 1813, 1863, 1999, 2660
Hpy8I GTNNAC 2 cut(s) 2486, 2504
HpyAV CCTTC 6 cut(s) 179, 780, 1385, 2431, 2517, 2673
HpyCH4III ACNGT 6 cut(s) 406, 622, 946, 1054, 1853, 2337
HpyCH4IV ACGT 2 cut(s) 84, 2488
HpyF10VI GCNNNNNNNGC 4 cut(s) 145, 231, 687, 1426
HpyF3I CTNAG 7 cut(s) 290, 425, 716, 987, 1043, 1220, 1421
HpySE526I ACGT 2 cut(s) 84, 2488
HspAI GCGC 1 cut(s) 1900
KpnI GGTACC 1 cut(s) 1442
Ksp22I TGATCA 3 cut(s) 1125, 2610, 2655
LmnI GCTCC 2 cut(s) 736, 1802
Lsp1109I GCAGC 4 cut(s) 123, 1557, 2353, 2542
LweI GCATC 4 cut(s) 1160, 1183, 1911, 2259
MaeII ACGT 2 cut(s) 84, 2488
MaeIII GTNAC 5 cut(s) 63, 645, 1446, 1694, 2428
MbiI CCGCTC 1 cut(s) 2629
MboII GAAGA 7 cut(s) 328, 765, 1634, 2144, 2531, 2534, 2537
MfeI CAATTG 2 cut(s) 226, 485
MflI RGATCY 5 cut(s) 123, 952, 1099, 1402, 2322
MhlI GDGCHC 1 cut(s) 1807
MlsI TGGCCA 3 cut(s) 762, 1275, 2144
MluNI TGGCCA 3 cut(s) 762, 1275, 2144
MlyI GAGTC 4 cut(s) 259, 998, 1319, 1757
MmeI TCCRAC 2 cut(s) 348, 2383
Mox20I TGGCCA 3 cut(s) 762, 1275, 2144
Mph1103I ATGCAT 2 cut(s) 1153, 1272
MscI TGGCCA 3 cut(s) 762, 1275, 2144
MslI CAYNNNNRTG 5 cut(s) 16, 164, 828, 1560, 2090
Msp20I TGGCCA 3 cut(s) 762, 1275, 2144
MspCI CTTAAG 1 cut(s) 1073
MspI CCGG 3 cut(s) 1367, 1932, 2399
MspR9I CCNGG 2 cut(s) 1381, 2451
MunI CAATTG 2 cut(s) 226, 485
Mva1269I GAATGC 3 cut(s) 1153, 1158, 1272
MvaI CCWGG 2 cut(s) 1381, 2451
MvnI CGCG 1 cut(s) 472
MwoI GCNNNNNNNGC 4 cut(s) 145, 231, 687, 1426
NdeI CATATG 1 cut(s) 2437
NlaIV GGNNCC 4 cut(s) 1440, 1657, 1847, 2198
NmuCI GTSAC 3 cut(s) 63, 645, 2428
NsbI TGCGCA 1 cut(s) 1901
NsiI ATGCAT 2 cut(s) 1153, 1272
NspI RCATGY 1 cut(s) 169
NspV TTCGAA 1 cut(s) 2424
PaeR7I CTCGAG 1 cut(s) 1745
PagI TCATGA 2 cut(s) 1879, 2029
PasI CCCWGGG 1 cut(s) 1380
PciI ACATGT 1 cut(s) 165
PctI GAATGC 3 cut(s) 1153, 1158, 1272
PfeI GAWTC 8 cut(s) 386, 766, 784, 982, 1967, 2019, 2026, 2179
PflFI GACNNNGTC 1 cut(s) 245
PinAI ACCGGT 2 cut(s) 1931, 2398
PkrI GCNGC 8 cut(s) 138, 680, 1572, 1575, 2249, 2343, 2557, 2560
PleI GAGTC 4 cut(s) 259, 997, 1318, 1756
PpsI GAGTC 4 cut(s) 259, 997, 1318, 1756
PscI ACATGT 1 cut(s) 165
PshBI ATTAAT 2 cut(s) 606, 828
Psp124BI GAGCTC 1 cut(s) 1807
Psp6I CCWGG 2 cut(s) 1379, 2449
PspFI CCCAGC 1 cut(s) 864
PspGI CCWGG 2 cut(s) 1379, 2449
PspN4I GGNNCC 4 cut(s) 1440, 1657, 1847, 2198
PspPI GGNCC 4 cut(s) 905, 1427, 2293, 2682
PspXI VCTCGAGB 1 cut(s) 1745
PsrI GAACNNNNNNTAC 2 cut(s) 2487, 2519
PstI CTGCAG 1 cut(s) 1707
PsuI RGATCY 5 cut(s) 123, 952, 1099, 1402, 2322
PsyI GACNNNGTC 1 cut(s) 245
RsaI GTAC 9 cut(s) 624, 1051, 1244, 1281, 1440, 2003, 2066, 2078, 2419
RsaNI GTAC 9 cut(s) 623, 1050, 1243, 1280, 1439, 2002, 2065, 2077, 2418
RseI CAYNNNNRTG 5 cut(s) 16, 164, 828, 1560, 2090
SacI GAGCTC 1 cut(s) 1807
SatI GCNGC 8 cut(s) 137, 679, 1571, 1574, 2248, 2342, 2556, 2559
Sau96I GGNCC 4 cut(s) 905, 1427, 2293, 2682
ScaI AGTACT 1 cut(s) 2078
SchI GAGTC 4 cut(s) 259, 998, 1319, 1757
ScrFI CCNGG 2 cut(s) 1381, 2451
SduI GDGCHC 1 cut(s) 1807
SfaNI GCATC 4 cut(s) 1160, 1183, 1911, 2259
SfcI CTRYAG 1 cut(s) 1703
Sfr274I CTCGAG 1 cut(s) 1745
SfuI TTCGAA 1 cut(s) 2424
SinI GGWCC 2 cut(s) 905, 2293
SlaI CTCGAG 1 cut(s) 1745
SmiMI CAYNNNNRTG 5 cut(s) 16, 164, 828, 1560, 2090
SmlI CTYRAG 4 cut(s) 353, 1013, 1073, 1745
SmoI CTYRAG 4 cut(s) 353, 1013, 1073, 1745
SspI AATATT 1 cut(s) 39
SstI GAGCTC 1 cut(s) 1807
StyD4I CCNGG 2 cut(s) 1379, 2449
StyI CCWWGG 2 cut(s) 1163, 2262
TaaI ACNGT 6 cut(s) 406, 622, 946, 1054, 1853, 2337
TaiI ACGT 2 cut(s) 87, 2491
TatI WGTACW 2 cut(s) 2001, 2076
TauI GCSGC 4 cut(s) 681, 1576, 2250, 2561
TfiI GAWTC 8 cut(s) 386, 766, 784, 982, 1967, 2019, 2026, 2179
TscAI CASTG 6 cut(s) 1051, 1059, 1135, 1583, 2340, 2629
TseFI GTSAC 3 cut(s) 63, 645, 2428
TseI GCWGC 4 cut(s) 136, 1570, 2341, 2555
Tsp45I GTSAC 3 cut(s) 63, 645, 2428
TspGWI ACGGA 3 cut(s) 1278, 1434, 2007
TspRI CASTG 6 cut(s) 1051, 1059, 1135, 1583, 2340, 2629
Tth111I GACNNNGTC 1 cut(s) 245
Vha464I CTTAAG 1 cut(s) 1073
VpaK11BI GGWCC 2 cut(s) 905, 2293
VspI ATTAAT 2 cut(s) 606, 828
XagI CCTNNNNNAGG 1 cut(s) 1650
XbaI TCTAGA 2 cut(s) 949, 1582
XceI RCATGY 1 cut(s) 169
XhoI CTCGAG 1 cut(s) 1745
XmiI GTMKAC 1 cut(s) 2503
ZrmI AGTACT 1 cut(s) 2078
Zsp2I ATGCAT 2 cut(s) 1153, 1272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.