Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G18940 |
| fragaria_vesca | FvH4_5g16250 FvH4_5g27360 FvH4_5g27360 FvH4_5g27360 FvH4_5g27360 FvH4_5g27360 |
| malus_domestica | MD10G1085900.v1.1 |
| prunus_persica | Prupe.8G110200_v2.0.a1 Prupe.8G110200_v2.0.a1 |
| pyrus_communis | pycom10g06750 |
| rosa_chinensis | RchiOBHm_Chr6g0260971 RchiOBHm_Chr6g0261021 |
| rosa_laevigata | RLG00000014468 RLG00000014472 RLG00000014474 RLG00000018640 |
| rosa_multiflora | Rmu_sc0003337.1_g000013 Rmu_sc0003337.1_g000027 Rmu_sc0005816.1_g000016 Rmu_sc0005816.1_g000028 |
| rosa_roxburghii | Rroxscaffold_7G00207570 Rroxscaffold_7G00207610 |
| rosa_rugosa | Rorug02G0235400 Rorug05G0593600 Rorug05G0593700 Rorug05G0593800 Rorug05G0593900 Rorug05G0594000 Rorug05G0594100 Rorug05G0594200 Rorug05G0594300 |
| rosa_samantha | Rh6AG113500 Rh6AG113800 Rh6BG107300 Rh6CG104500 Rh6DG095300 |
| rosa_wichuraiana | Rw6G009650 Rw6G009680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 645 |
| Acc16I | TGCGCA | 1 cut(s) | 2665 |
| Acc36I | ACCTGC | 1 cut(s) | 401 |
| Acc65I | GGTACC | 1 cut(s) | 1523 |
| AccB1I | GGYRCC | 2 cut(s) | 1523, 3140 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 307, 403, 491 |
| AccI | GTMKAC | 3 cut(s) | 367, 1488, 2891 |
| AccII | CGCG | 1 cut(s) | 525 |
| AccIII | TCCGGA | 1 cut(s) | 2737 |
| AciI | CCGC | 9 cut(s) | 211, 214, 217, 312, 734, 1162, 1295, 1889, 1931 |
| AcsI | RAATTY | 3 cut(s) | 358, 998, 1433 |
| AcuI | CTGAAG | 2 cut(s) | 2580, 2802 |
| AcvI | CACGTG | 1 cut(s) | 1673 |
| AfaI | GTAC | 9 cut(s) | 36, 391, 683, 1525, 1669, 1941, 2395, 2457, 2993 |
| AfeI | AGCGCT | 1 cut(s) | 438 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 307, 403, 491, 1023, 1367, 1545, 3178 |
| AflIII | ACRYGT | 2 cut(s) | 1418, 1670 |
| AjnI | CCWGG | 5 cut(s) | 1352, 1410, 1726, 1860, 2218 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1714, 1746 |
| Alw21I | GWGCWC | 2 cut(s) | 1036, 1142 |
| Alw26I | GTCTC | 7 cut(s) | 30, 596, 598, 610, 631, 803, 944 |
| Ama87I | CYCGRG | 1 cut(s) | 3222 |
| Aor13HI | TCCGGA | 1 cut(s) | 2737 |
| Aor51HI | AGCGCT | 1 cut(s) | 438 |
| AoxI | GGCC | 5 cut(s) | 493, 966, 1863, 2035, 2279 |
| ApaI | GGGCCC | 1 cut(s) | 2039 |
| ApeKI | GCWGC | 8 cut(s) | 65, 512, 847, 850, 1424, 1974, 1997, 3046 |
| ApoI | RAATTY | 3 cut(s) | 358, 998, 1433 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 267, 1395 |
| Asp718I | GGTACC | 1 cut(s) | 1523 |
| AspLEI | GCGC | 3 cut(s) | 439, 527, 2666 |
| AspS9I | GGNCC | 8 cut(s) | 290, 494, 647, 814, 1958, 2035, 2036, 2280 |
| AsuHPI | GGTGA | 6 cut(s) | 173, 418, 1615, 3095, 3178, 3239 |
| AsuII | TTCGAA | 2 cut(s) | 170, 2507 |
| AsuNHI | GCTAGC | 1 cut(s) | 1406 |
| AvaI | CYCGRG | 1 cut(s) | 3222 |
| AvaII | GGWCC | 4 cut(s) | 290, 647, 814, 1958 |
| AxyI | CCTNAGG | 1 cut(s) | 1101 |
| BaeGI | GKGCMC | 1 cut(s) | 2039 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1515, 1548 |
| BamHI | GGATCC | 1 cut(s) | 2398 |
| BanI | GGYRCC | 2 cut(s) | 1523, 3140 |
| BanII | GRGCYC | 2 cut(s) | 1036, 2039 |
| BauI | CACGAG | 1 cut(s) | 74 |
| BbrPI | CACGTG | 1 cut(s) | 1673 |
| BbsI | GAAGAC | 1 cut(s) | 1388 |
| Bbv12I | GWGCWC | 2 cut(s) | 1036, 1142 |
| BbvI | GCAGC | 8 cut(s) | 52, 499, 837, 859, 1436, 1986, 2009, 3033 |
| BceAI | ACGGC | 1 cut(s) | 2932 |
| BciT130I | CCWGG | 5 cut(s) | 1354, 1412, 1728, 1862, 2220 |
| BciVI | GTATCC | 2 cut(s) | 936, 1368 |
| BclI | TGATCA | 2 cut(s) | 1696, 1912 |
| BcoDI | GTCTC | 7 cut(s) | 30, 596, 598, 610, 631, 803, 944 |
| BfaI | CTAG | 5 cut(s) | 6, 1362, 1407, 2018, 2250 |
| BfmI | CTRYAG | 3 cut(s) | 1753, 1810, 2950 |
| BfoI | RGCGCY | 1 cut(s) | 440 |
| BfuAI | ACCTGC | 1 cut(s) | 401 |
| BfuI | GTATCC | 2 cut(s) | 936, 1368 |
| BglII | AGATCT | 3 cut(s) | 2014, 2305, 2732 |
| Bme1390I | CCNGG | 5 cut(s) | 1354, 1412, 1728, 1862, 2220 |
| Bme18I | GGWCC | 4 cut(s) | 290, 647, 814, 1958 |
| BmeT110I | CYCGRG | 1 cut(s) | 3222 |
| BmgT120I | GGNCC | 8 cut(s) | 290, 494, 647, 814, 1958, 2035, 2036, 2280 |
| BmiI | GGNNCC | 7 cut(s) | 816, 1525, 1724, 1775, 2037, 2400, 3142 |
| BmrFI | CCNGG | 5 cut(s) | 1354, 1412, 1728, 1862, 2220 |
| BmrI | ACTGGG | 4 cut(s) | 321, 1476, 2033, 3084 |
| BmsI | GCATC | 9 cut(s) | 136, 264, 721, 730, 759, 1206, 1309, 1331, 2777 |
| BmtI | GCTAGC | 1 cut(s) | 1410 |
| BmuI | ACTGGG | 4 cut(s) | 321, 1476, 2033, 3084 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1263, 2952 |
| BpiI | GAAGAC | 1 cut(s) | 1388 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 788, 820 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1457 |
| Bpu14I | TTCGAA | 2 cut(s) | 170, 2507 |
| BpuEI | CTTGAG | 2 cut(s) | 1436, 1778 |
| Bsa29I | ATCGAT | 1 cut(s) | 2703 |
| BsaAI | YACGTR | 1 cut(s) | 1673 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2013, 2190 |
| BsaI | GGTCTC | 2 cut(s) | 596, 598 |
| BsaJI | CCNNGG | 5 cut(s) | 490, 597, 1726, 2219, 2910 |
| BsaWI | WCCGGW | 2 cut(s) | 973, 2737 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2543, 2573 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 307, 403, 491, 1023, 1367, 1545, 3178 |
| Bse118I | RCCGGY | 1 cut(s) | 3178 |
| Bse1I | ACTGG | 8 cut(s) | 327, 848, 1482, 1592, 1948, 2039, 2120, 3079 |
| Bse21I | CCTNAGG | 1 cut(s) | 1101 |
| Bse3DI | GCAATG | 7 cut(s) | 1434, 1882, 1984, 2453, 2659, 2983, 3002 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2013, 2190 |
| BseAI | TCCGGA | 1 cut(s) | 2737 |
| BseBI | CCWGG | 5 cut(s) | 1354, 1412, 1728, 1862, 2220 |
| BseCI | ATCGAT | 1 cut(s) | 2703 |
| BseDI | CCNNGG | 5 cut(s) | 490, 597, 1726, 2219, 2910 |
| BseJI | GATNNNNATC | 2 cut(s) | 2013, 2190 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 307, 403, 491, 1023, 1367, 1545, 3178 |
| BseMI | GCAATG | 7 cut(s) | 1434, 1882, 1984, 2453, 2659, 2983, 3002 |
| BseMII | CTCAG | 7 cut(s) | 540, 1115, 1155, 1554, 2169, 2277, 2955 |
| BseNI | ACTGG | 8 cut(s) | 327, 848, 1482, 1592, 1948, 2039, 2120, 3079 |
| BseSI | GKGCMC | 1 cut(s) | 2039 |
| BseXI | GCAGC | 8 cut(s) | 52, 499, 837, 859, 1436, 1986, 2009, 3033 |
| BseYI | CCCAGC | 2 cut(s) | 1079, 1519 |
| BsgI | GTGCAG | 2 cut(s) | 1443, 2100 |
| Bsh1236I | CGCG | 1 cut(s) | 525 |
| BshFI | GGCC | 5 cut(s) | 495, 968, 1865, 2037, 2281 |
| BshNI | GGYRCC | 2 cut(s) | 1523, 3140 |
| BshVI | ATCGAT | 1 cut(s) | 2703 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1036, 1142 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3222 |
| BsiSI | CCGG | 3 cut(s) | 974, 2738, 3179 |
| BslFI | GGGAC | 1 cut(s) | 329 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 307, 403, 491, 1023, 1367, 1545, 3178 |
| BsmAI | GTCTC | 7 cut(s) | 30, 596, 598, 610, 631, 803, 944 |
| BsmBI | CGTCTC | 1 cut(s) | 803 |
| BsmFI | GGGAC | 1 cut(s) | 329 |
| BsmI | GAATGC | 3 cut(s) | 831, 1534, 2919 |
| BsnI | GGCC | 5 cut(s) | 495, 968, 1865, 2037, 2281 |
| Bso31I | GGTCTC | 2 cut(s) | 596, 598 |
| BsoBI | CYCGRG | 1 cut(s) | 3222 |
| Bsp119I | TTCGAA | 2 cut(s) | 170, 2507 |
| Bsp120I | GGGCCC | 1 cut(s) | 2035 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1036, 1142, 2039 |
| Bsp13I | TCCGGA | 1 cut(s) | 2737 |
| Bsp1407I | TGTACA | 2 cut(s) | 34, 1939 |
| Bsp19I | CCATGG | 1 cut(s) | 490 |
| BspACI | CCGC | 9 cut(s) | 211, 214, 217, 312, 734, 1162, 1295, 1889, 1931 |
| BspANI | GGCC | 5 cut(s) | 495, 968, 1865, 2037, 2281 |
| BspCNI | CTCAG | 7 cut(s) | 541, 1114, 1154, 1555, 2170, 2276, 2956 |
| BspDI | ATCGAT | 1 cut(s) | 2703 |
| BspEI | TCCGGA | 1 cut(s) | 2737 |
| BspFNI | CGCG | 1 cut(s) | 525 |
| BspHI | TCATGA | 2 cut(s) | 1894, 2695 |
| BspLI | GGNNCC | 7 cut(s) | 816, 1525, 1724, 1775, 2037, 2400, 3142 |
| BspMAI | CTGCAG | 2 cut(s) | 1757, 1814 |
| BspMI | ACCTGC | 1 cut(s) | 401 |
| BspOI | GCTAGC | 1 cut(s) | 1410 |
| BspQI | GCTCTTC | 1 cut(s) | 3036 |
| BspT104I | TTCGAA | 2 cut(s) | 170, 2507 |
| BspT107I | GGYRCC | 2 cut(s) | 1523, 3140 |
| BspTNI | GGTCTC | 2 cut(s) | 596, 598 |
| BsrDI | GCAATG | 7 cut(s) | 1434, 1882, 1984, 2453, 2659, 2983, 3002 |
| BsrFI | RCCGGY | 1 cut(s) | 3178 |
| BsrGI | TGTACA | 2 cut(s) | 34, 1939 |
| BsrI | ACTGG | 8 cut(s) | 327, 848, 1482, 1592, 1948, 2039, 2120, 3079 |
| BssAI | RCCGGY | 1 cut(s) | 3178 |
| BssECI | CCNNGG | 5 cut(s) | 490, 597, 1726, 2219, 2910 |
| BssSI | CACGAG | 1 cut(s) | 74 |
| BssT1I | CCWWGG | 2 cut(s) | 490, 2910 |
| Bst2BI | CACGAG | 1 cut(s) | 74 |
| Bst2UI | CCWGG | 5 cut(s) | 1354, 1412, 1728, 1862, 2220 |
| Bst6I | CTCTTC | 2 cut(s) | 33, 3036 |
| BstAUI | TGTACA | 2 cut(s) | 34, 1939 |
| BstBAI | YACGTR | 1 cut(s) | 1673 |
| BstBI | TTCGAA | 2 cut(s) | 170, 2507 |
| BstC8I | GCNNGC | 5 cut(s) | 222, 1221, 1408, 1889, 2879 |
| BstDEI | CTNAG | 8 cut(s) | 549, 1101, 1141, 1457, 1563, 2178, 2263, 2964 |
| BstDSI | CCRYGG | 2 cut(s) | 490, 597 |
| BstEII | GGTNACC | 1 cut(s) | 2684 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1365 |
| BstFNI | CGCG | 1 cut(s) | 525 |
| BstH2I | RGCGCY | 1 cut(s) | 440 |
| BstHHI | GCGC | 3 cut(s) | 439, 527, 2666 |
| BstMAI | GTCTC | 7 cut(s) | 30, 596, 598, 610, 631, 803, 944 |
| BstNI | CCWGG | 5 cut(s) | 1354, 1412, 1728, 1862, 2220 |
| BstNSI | RCATGY | 5 cut(s) | 467, 760, 1422, 2093, 2130 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1263, 2952 |
| BstPI | GGTNACC | 1 cut(s) | 2684 |
| BstSCI | CCNGG | 5 cut(s) | 1352, 1410, 1726, 1860, 2218 |
| BstSFI | CTRYAG | 3 cut(s) | 1753, 1810, 2950 |
| BstSLI | GKGCMC | 1 cut(s) | 2039 |
| BstUI | CGCG | 1 cut(s) | 525 |
| BstV1I | GCAGC | 8 cut(s) | 52, 499, 837, 859, 1436, 1986, 2009, 3033 |
| BstV2I | GAAGAC | 1 cut(s) | 1388 |
| BstX2I | RGATCY | 6 cut(s) | 553, 1060, 2014, 2305, 2398, 2732 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1955 |
| BstYI | RGATCY | 6 cut(s) | 553, 1060, 2014, 2305, 2398, 2732 |
| Bsu15I | ATCGAT | 1 cut(s) | 2703 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1101 |
| BsuI | GTATCC | 2 cut(s) | 936, 1368 |
| BsuRI | GGCC | 5 cut(s) | 495, 968, 1865, 2037, 2281 |
| BsuTUI | ATCGAT | 1 cut(s) | 2703 |
| BtgI | CCRYGG | 2 cut(s) | 490, 597 |
| BtgZI | GCGATG | 1 cut(s) | 2996 |
| BtsIMutI | CAGTG | 6 cut(s) | 621, 1142, 1149, 1489, 3102, 3193 |
| BveI | ACCTGC | 1 cut(s) | 401 |
| Cac8I | GCNNGC | 5 cut(s) | 222, 1221, 1408, 1889, 2879 |
| CciI | TCATGA | 2 cut(s) | 1894, 2695 |
| CfoI | GCGC | 3 cut(s) | 439, 527, 2666 |
| Cfr10I | RCCGGY | 1 cut(s) | 3178 |
| Cfr13I | GGNCC | 8 cut(s) | 290, 494, 647, 814, 1958, 2035, 2036, 2280 |
| ClaI | ATCGAT | 1 cut(s) | 2703 |
| CsiI | ACCWGGT | 1 cut(s) | 1352 |
| Csp6I | GTAC | 9 cut(s) | 35, 390, 682, 1524, 1668, 1940, 2394, 2456, 2992 |
| CviQI | GTAC | 9 cut(s) | 35, 390, 682, 1524, 1668, 1940, 2394, 2456, 2992 |
| DdeI | CTNAG | 8 cut(s) | 549, 1101, 1141, 1457, 1563, 2178, 2263, 2964 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 645 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 645 |
| Eam1104I | CTCTTC | 2 cut(s) | 33, 3036 |
| EarI | CTCTTC | 2 cut(s) | 33, 3036 |
| Ecl136II | GAGCTC | 1 cut(s) | 1034 |
| Eco130I | CCWWGG | 2 cut(s) | 490, 2910 |
| Eco147I | AGGCCT | 1 cut(s) | 1865 |
| Eco24I | GRGCYC | 2 cut(s) | 1036, 2039 |
| Eco31I | GGTCTC | 2 cut(s) | 596, 598 |
| Eco32I | GATATC | 1 cut(s) | 2701 |
| Eco47I | GGWCC | 4 cut(s) | 290, 647, 814, 1958 |
| Eco47III | AGCGCT | 1 cut(s) | 438 |
| Eco53kI | GAGCTC | 1 cut(s) | 1034 |
| Eco57I | CTGAAG | 2 cut(s) | 2580, 2802 |
| Eco72I | CACGTG | 1 cut(s) | 1673 |
| Eco81I | CCTNAGG | 1 cut(s) | 1101 |
| Eco88I | CYCGRG | 1 cut(s) | 3222 |
| Eco91I | GGTNACC | 1 cut(s) | 2684 |
| EcoICRI | GAGCTC | 1 cut(s) | 1034 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1365 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2035, 2280 |
| EcoO65I | GGTNACC | 1 cut(s) | 2684 |
| EcoRI | GAATTC | 1 cut(s) | 1433 |
| EcoRII | CCWGG | 5 cut(s) | 1352, 1410, 1726, 1860, 2218 |
| EcoRV | GATATC | 1 cut(s) | 2701 |
| EcoT14I | CCWWGG | 2 cut(s) | 490, 2910 |
| EcoT22I | ATGCAT | 2 cut(s) | 1177, 1324 |
| EcoT38I | GRGCYC | 2 cut(s) | 1036, 2039 |
| ErhI | CCWWGG | 2 cut(s) | 490, 2910 |
| Esp3I | CGTCTC | 1 cut(s) | 803 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2295, 2327 |
| FaqI | GGGAC | 1 cut(s) | 329 |
| FauI | CCCGC | 2 cut(s) | 1155, 1896 |
| FauNDI | CATATG | 2 cut(s) | 721, 1262 |
| FbaI | TGATCA | 2 cut(s) | 1696, 1912 |
| FblI | GTMKAC | 3 cut(s) | 367, 1488, 2891 |
| FriOI | GRGCYC | 2 cut(s) | 1036, 2039 |
| FspBI | CTAG | 5 cut(s) | 6, 1362, 1407, 2018, 2250 |
| FspI | TGCGCA | 1 cut(s) | 2665 |
| GlaI | GCGC | 3 cut(s) | 438, 526, 2665 |
| GsaI | CCCAGC | 2 cut(s) | 1083, 1523 |
| HaeII | RGCGCY | 1 cut(s) | 440 |
| HaeIII | GGCC | 5 cut(s) | 495, 968, 1865, 2037, 2281 |
| HapII | CCGG | 3 cut(s) | 974, 2738, 3179 |
| HhaI | GCGC | 3 cut(s) | 439, 527, 2666 |
| Hin6I | GCGC | 3 cut(s) | 437, 525, 2664 |
| HinP1I | GCGC | 3 cut(s) | 437, 525, 2664 |
| HincII | GTYRAC | 2 cut(s) | 368, 1268 |
| HindII | GTYRAC | 2 cut(s) | 368, 1268 |
| HindIII | AAGCTT | 3 cut(s) | 1153, 1454, 2592 |
| HpaII | CCGG | 3 cut(s) | 974, 2738, 3179 |
| HphI | GGTGA | 6 cut(s) | 173, 418, 1615, 3095, 3178, 3239 |
| Hpy99I | CGWCG | 3 cut(s) | 190, 714, 1214 |
| HpyAV | CCTTC | 9 cut(s) | 79, 86, 572, 1074, 1230, 1561, 1658, 2913, 3205 |
| HpyCH4IV | ACGT | 3 cut(s) | 684, 712, 1672 |
| HpyF3I | CTNAG | 8 cut(s) | 549, 1101, 1141, 1457, 1563, 2178, 2263, 2964 |
| HpySE526I | ACGT | 3 cut(s) | 684, 712, 1672 |
| HspAI | GCGC | 3 cut(s) | 437, 525, 2664 |
| Kpn2I | TCCGGA | 1 cut(s) | 2737 |
| KpnI | GGTACC | 1 cut(s) | 1527 |
| Ksp22I | TGATCA | 2 cut(s) | 1696, 1912 |
| LguI | GCTCTTC | 1 cut(s) | 3036 |
| LmnI | GCTCC | 3 cut(s) | 1884, 2443, 2656 |
| Lsp1109I | GCAGC | 8 cut(s) | 52, 499, 837, 859, 1436, 1986, 2009, 3033 |
| LweI | GCATC | 9 cut(s) | 136, 264, 721, 730, 759, 1206, 1309, 1331, 2777 |
| MabI | ACCWGGT | 1 cut(s) | 1352 |
| MaeI | CTAG | 5 cut(s) | 6, 1362, 1407, 2018, 2250 |
| MaeII | ACGT | 3 cut(s) | 684, 712, 1672 |
| MaeIII | GTNAC | 6 cut(s) | 101, 1681, 2223, 2684, 3188, 3199 |
| MflI | RGATCY | 6 cut(s) | 553, 1060, 2014, 2305, 2398, 2732 |
| MhlI | GDGCHC | 3 cut(s) | 1036, 1142, 2039 |
| MlyI | GAGTC | 3 cut(s) | 1000, 1640, 2975 |
| MmeI | TCCRAC | 2 cut(s) | 71, 209 |
| Mph1103I | ATGCAT | 2 cut(s) | 1177, 1324 |
| MroI | TCCGGA | 1 cut(s) | 2737 |
| MroXI | GAANNNNTTC | 2 cut(s) | 267, 1395 |
| MslI | CAYNNNNRTG | 5 cut(s) | 755, 761, 2466, 2481, 2694 |
| MspA1I | CMGCKG | 1 cut(s) | 850 |
| MspI | CCGG | 3 cut(s) | 974, 2738, 3179 |
| MspR9I | CCNGG | 5 cut(s) | 1354, 1412, 1728, 1862, 2220 |
| Mva1269I | GAATGC | 3 cut(s) | 831, 1534, 2919 |
| MvaI | CCWGG | 5 cut(s) | 1354, 1412, 1728, 1862, 2220 |
| MvnI | CGCG | 1 cut(s) | 525 |
| NcoI | CCATGG | 1 cut(s) | 490 |
| NdeI | CATATG | 2 cut(s) | 721, 1262 |
| NheI | GCTAGC | 1 cut(s) | 1406 |
| NlaIV | GGNNCC | 7 cut(s) | 816, 1525, 1724, 1775, 2037, 2400, 3142 |
| NmuCI | GTSAC | 2 cut(s) | 101, 3188 |
| NsbI | TGCGCA | 1 cut(s) | 2665 |
| NsiI | ATGCAT | 2 cut(s) | 1177, 1324 |
| NspI | RCATGY | 5 cut(s) | 467, 760, 1422, 2093, 2130 |
| NspV | TTCGAA | 2 cut(s) | 170, 2507 |
| PaeR7I | CTCGAG | 1 cut(s) | 3222 |
| PagI | TCATGA | 2 cut(s) | 1894, 2695 |
| PceI | AGGCCT | 1 cut(s) | 1865 |
| PciI | ACATGT | 1 cut(s) | 1418 |
| PciSI | GCTCTTC | 1 cut(s) | 3036 |
| PctI | GAATGC | 3 cut(s) | 831, 1534, 2919 |
| PdmI | GAANNNNTTC | 2 cut(s) | 267, 1395 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 307, 403, 491 |
| PkrI | GCNGC | 6 cut(s) | 67, 213, 216, 219, 314, 514 |
| PleI | GAGTC | 3 cut(s) | 999, 1640, 2974 |
| PmaCI | CACGTG | 1 cut(s) | 1673 |
| PmlI | CACGTG | 1 cut(s) | 1673 |
| PpsI | GAGTC | 3 cut(s) | 999, 1640, 2974 |
| Ppu21I | YACGTR | 1 cut(s) | 1673 |
| PscI | ACATGT | 1 cut(s) | 1418 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1263, 2952 |
| Psp124BI | GAGCTC | 1 cut(s) | 1036 |
| Psp6I | CCWGG | 5 cut(s) | 1352, 1410, 1726, 1860, 2218 |
| PspCI | CACGTG | 1 cut(s) | 1673 |
| PspEI | GGTNACC | 1 cut(s) | 2684 |
| PspFI | CCCAGC | 2 cut(s) | 1079, 1519 |
| PspGI | CCWGG | 5 cut(s) | 1352, 1410, 1726, 1860, 2218 |
| PspN4I | GGNNCC | 7 cut(s) | 816, 1525, 1724, 1775, 2037, 2400, 3142 |
| PspOMI | GGGCCC | 1 cut(s) | 2035 |
| PspPI | GGNCC | 8 cut(s) | 290, 494, 647, 814, 1958, 2035, 2036, 2280 |
| PspXI | VCTCGAGB | 1 cut(s) | 3222 |
| PstI | CTGCAG | 2 cut(s) | 1757, 1814 |
| PsuI | RGATCY | 6 cut(s) | 553, 1060, 2014, 2305, 2398, 2732 |
| PvuII | CAGCTG | 1 cut(s) | 850 |
| RsaI | GTAC | 9 cut(s) | 36, 391, 683, 1525, 1669, 1941, 2395, 2457, 2993 |
| RsaNI | GTAC | 9 cut(s) | 35, 390, 682, 1524, 1668, 1940, 2394, 2456, 2992 |
| RseI | CAYNNNNRTG | 5 cut(s) | 755, 761, 2466, 2481, 2694 |
| SacI | GAGCTC | 1 cut(s) | 1036 |
| SalI | GTCGAC | 1 cut(s) | 366 |
| SapI | GCTCTTC | 1 cut(s) | 3036 |
| Sau96I | GGNCC | 8 cut(s) | 290, 494, 647, 814, 1958, 2035, 2036, 2280 |
| SchI | GAGTC | 3 cut(s) | 1000, 1640, 2975 |
| ScrFI | CCNGG | 5 cut(s) | 1354, 1412, 1728, 1862, 2220 |
| SduI | GDGCHC | 3 cut(s) | 1036, 1142, 2039 |
| SexAI | ACCWGGT | 1 cut(s) | 1352 |
| SfaNI | GCATC | 9 cut(s) | 136, 264, 721, 730, 759, 1206, 1309, 1331, 2777 |
| SfcI | CTRYAG | 3 cut(s) | 1753, 1810, 2950 |
| Sfr274I | CTCGAG | 1 cut(s) | 3222 |
| SfuI | TTCGAA | 2 cut(s) | 170, 2507 |
| SinI | GGWCC | 4 cut(s) | 290, 647, 814, 1958 |
| SlaI | CTCGAG | 1 cut(s) | 3222 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 755, 761, 2466, 2481, 2694 |
| SmlI | CTYRAG | 3 cut(s) | 1451, 1793, 3222 |
| SmoI | CTYRAG | 3 cut(s) | 1451, 1793, 3222 |
| SseBI | AGGCCT | 1 cut(s) | 1865 |
| SsiI | CCGC | 9 cut(s) | 211, 214, 217, 312, 734, 1162, 1295, 1889, 1931 |
| SspMI | CTAG | 5 cut(s) | 6, 1362, 1407, 2018, 2250 |
| SstI | GAGCTC | 1 cut(s) | 1036 |
| StuI | AGGCCT | 1 cut(s) | 1865 |
| StyD4I | CCNGG | 5 cut(s) | 1352, 1410, 1726, 1860, 2218 |
| StyI | CCWWGG | 2 cut(s) | 490, 2910 |
| TaiI | ACGT | 3 cut(s) | 687, 715, 1675 |
| TaqI | TCGA | 8 cut(s) | 83, 170, 201, 367, 709, 2507, 2703, 3223 |
| TatI | WGTACW | 2 cut(s) | 34, 1939 |
| TauI | GCSGC | 4 cut(s) | 214, 217, 220, 315 |
| TscAI | CASTG | 6 cut(s) | 628, 1142, 1149, 1489, 3109, 3193 |
| TseFI | GTSAC | 2 cut(s) | 101, 3188 |
| TseI | GCWGC | 8 cut(s) | 65, 512, 847, 850, 1424, 1974, 1997, 3046 |
| Tsp45I | GTSAC | 2 cut(s) | 101, 3188 |
| TspGWI | ACGGA | 5 cut(s) | 586, 619, 827, 2411, 2655 |
| TspRI | CASTG | 6 cut(s) | 628, 1142, 1149, 1489, 3109, 3193 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 307, 403, 491 |
| VpaK11BI | GGWCC | 4 cut(s) | 290, 647, 814, 1958 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1365 |
| XapI | RAATTY | 3 cut(s) | 358, 998, 1433 |
| XbaI | TCTAGA | 1 cut(s) | 2017 |
| XceI | RCATGY | 5 cut(s) | 467, 760, 1422, 2093, 2130 |
| XhoI | CTCGAG | 1 cut(s) | 3222 |
| XmiI | GTMKAC | 3 cut(s) | 367, 1488, 2891 |
| XmnI | GAANNNNTTC | 2 cut(s) | 267, 1395 |
| XspI | CTAG | 5 cut(s) | 6, 1362, 1407, 2018, 2250 |
| Zsp2I | ATGCAT | 2 cut(s) | 1177, 1324 |