rRNA-processing protein FCF1 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26530 AT2G46230 AT2G46230 |
| fragaria_vesca | FvH4_7g15670 |
| malus_domestica | MD01G1073500.v1.1 |
| prunus_persica | Prupe.2G181300_v2.0.a1 |
| pyrus_communis | pycom01g10270 pycom07g12640 |
| rosa_chinensis | RchiOBHm_Chr1g0326781 RchiOBHm_Chr1g0358391 RchiOBHm_Chr3g0464711 RchiOBHm_Chr4g0446551 RchiOBHm_Chr5g0018241 RchiOBHm_Chr5g0036481 RchiOBHm_Chr5g0047481 RchiOBHm_Chr7g0222481 RchiOBHm_Chr7g0242171 |
| rosa_laevigata | RLG00000002127 RLG00000005477 RLG00000009675 RLG00000021519 RLG00000021818 RLG00000027964 RLG00000029323 RLG00000030557 |
| rosa_multiflora | Rmu_sc0000429.1_g000008 Rmu_sc0001428.1_g000020 Rmu_sc0002144.1_g000032 |
| rosa_roxburghii | Rroxscaffold_3G00222870 Rroxscaffold_4G00285130 Rroxscaffold_4G00298010 Rroxscaffold_4G00309490 |
| rosa_rugosa | Rorug01G0261400 Rorug05G0537800 |
| rosa_samantha | Rh1AG242900 Rh1CG258900 Rh3BG136100 Rh3CG138700 Rh4CG046400 Rh4DG046100 Rh5BG567000 Rh7CG386300 |
| rosa_wichuraiana | Rw1G024530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 346 |
| AclI | AACGTT | 1 cut(s) | 63 |
| AcsI | RAATTY | 1 cut(s) | 448 |
| AfaI | GTAC | 1 cut(s) | 148 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 103 |
| AgsI | TTSAA | 3 cut(s) | 10, 52, 268 |
| AjiI | CACGTC | 1 cut(s) | 291 |
| AluBI | AGCT | 2 cut(s) | 181, 434 |
| AluI | AGCT | 2 cut(s) | 181, 434 |
| Alw21I | GWGCWC | 1 cut(s) | 296 |
| Alw44I | GTGCAC | 1 cut(s) | 292 |
| ApaLI | GTGCAC | 1 cut(s) | 292 |
| ApeKI | GCWGC | 2 cut(s) | 349, 431 |
| ApoI | RAATTY | 1 cut(s) | 448 |
| AsuC2I | CCSGG | 1 cut(s) | 25 |
| AsuNHI | GCTAGC | 1 cut(s) | 434 |
| BaeGI | GKGCMC | 1 cut(s) | 296 |
| Bbv12I | GWGCWC | 1 cut(s) | 296 |
| BbvI | GCAGC | 2 cut(s) | 336, 443 |
| BccI | CCATC | 1 cut(s) | 118 |
| BcnI | CCSGG | 1 cut(s) | 25 |
| BfaI | CTAG | 1 cut(s) | 435 |
| BfmI | CTRYAG | 1 cut(s) | 237 |
| BisI | GCNGC | 3 cut(s) | 347, 350, 432 |
| BlsI | GCNGC | 3 cut(s) | 348, 351, 433 |
| Bme1390I | CCNGG | 1 cut(s) | 25 |
| BmgBI | CACGTC | 1 cut(s) | 291 |
| BmrFI | CCNGG | 1 cut(s) | 25 |
| BmsI | GCATC | 1 cut(s) | 369 |
| BmtI | GCTAGC | 1 cut(s) | 438 |
| BpuMI | CCSGG | 1 cut(s) | 25 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 103 |
| BseGI | GGATG | 1 cut(s) | 360 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 103 |
| BseMII | CTCAG | 1 cut(s) | 227 |
| BseSI | GKGCMC | 1 cut(s) | 296 |
| BseXI | GCAGC | 2 cut(s) | 336, 443 |
| BsiHKAI | GWGCWC | 1 cut(s) | 296 |
| BsiSI | CCGG | 1 cut(s) | 24 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 103 |
| BsmI | GAATGC | 1 cut(s) | 383 |
| Bsp1286I | GDGCHC | 1 cut(s) | 296 |
| BspACI | CCGC | 1 cut(s) | 346 |
| BspCNI | CTCAG | 1 cut(s) | 226 |
| BspHI | TCATGA | 1 cut(s) | 250 |
| BspOI | GCTAGC | 1 cut(s) | 438 |
| Bst4CI | ACNGT | 1 cut(s) | 339 |
| Bst6I | CTCTTC | 3 cut(s) | 77, 110, 367 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 428 |
| BstC8I | GCNNGC | 1 cut(s) | 436 |
| BstDEI | CTNAG | 1 cut(s) | 213 |
| BstF5I | GGATG | 1 cut(s) | 360 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 428 |
| BstSCI | CCNGG | 1 cut(s) | 23 |
| BstSFI | CTRYAG | 1 cut(s) | 237 |
| BstSLI | GKGCMC | 1 cut(s) | 296 |
| BstV1I | GCAGC | 2 cut(s) | 336, 443 |
| BtrI | CACGTC | 1 cut(s) | 291 |
| BtsCI | GGATG | 1 cut(s) | 360 |
| BtsI | GCAGTG | 1 cut(s) | 294 |
| BtsIMutI | CAGTG | 1 cut(s) | 294 |
| Cac8I | GCNNGC | 1 cut(s) | 436 |
| CciI | TCATGA | 1 cut(s) | 250 |
| Csp6I | GTAC | 1 cut(s) | 147 |
| CviAII | CATG | 2 cut(s) | 251, 317 |
| CviJI | RGCY | 5 cut(s) | 56, 181, 349, 434, 438 |
| CviKI_1 | RGCY | 5 cut(s) | 56, 181, 349, 434, 438 |
| CviQI | GTAC | 1 cut(s) | 147 |
| DdeI | CTNAG | 1 cut(s) | 213 |
| Eam1104I | CTCTTC | 3 cut(s) | 77, 110, 367 |
| EarI | CTCTTC | 3 cut(s) | 77, 110, 367 |
| Eco32I | GATATC | 1 cut(s) | 89 |
| EcoRV | GATATC | 1 cut(s) | 89 |
| FaeI | CATG | 2 cut(s) | 254, 320 |
| FaiI | YATR | 8 cut(s) | 136, 138, 168, 230, 252, 282, 284, 318 |
| FatI | CATG | 2 cut(s) | 250, 316 |
| FauNDI | CATATG | 1 cut(s) | 136 |
| Fnu4HI | GCNGC | 3 cut(s) | 347, 350, 432 |
| FokI | GGATG | 1 cut(s) | 347 |
| Fsp4HI | GCNGC | 3 cut(s) | 347, 350, 432 |
| FspBI | CTAG | 1 cut(s) | 435 |
| GluI | GCNGC | 3 cut(s) | 347, 350, 432 |
| HapII | CCGG | 1 cut(s) | 24 |
| Hin1II | CATG | 2 cut(s) | 254, 320 |
| HincII | GTYRAC | 1 cut(s) | 61 |
| HindII | GTYRAC | 1 cut(s) | 61 |
| HinfI | GANTC | 1 cut(s) | 375 |
| HpaII | CCGG | 1 cut(s) | 24 |
| Hpy166II | GTNNAC | 4 cut(s) | 61, 147, 294, 407 |
| Hpy188I | TCNGA | 4 cut(s) | 69, 198, 216, 365 |
| Hpy188III | TCNNGA | 2 cut(s) | 31, 251 |
| Hpy8I | GTNNAC | 4 cut(s) | 61, 147, 294, 407 |
| HpyAV | CCTTC | 2 cut(s) | 46, 449 |
| HpyCH4III | ACNGT | 1 cut(s) | 339 |
| HpyCH4IV | ACGT | 2 cut(s) | 63, 290 |
| HpyCH4V | TGCA | 4 cut(s) | 140, 286, 294, 431 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 428 |
| HpyF3I | CTNAG | 1 cut(s) | 213 |
| HpySE526I | ACGT | 2 cut(s) | 63, 290 |
| Hsp92II | CATG | 2 cut(s) | 254, 320 |
| LpnPI | CCDG | 5 cut(s) | 29, 37, 165, 381, 387 |
| Lsp1109I | GCAGC | 2 cut(s) | 336, 443 |
| LweI | GCATC | 1 cut(s) | 369 |
| MaeI | CTAG | 1 cut(s) | 435 |
| MaeII | ACGT | 2 cut(s) | 63, 290 |
| MaeIII | GTNAC | 1 cut(s) | 376 |
| MboII | GAAGA | 3 cut(s) | 94, 127, 384 |
| MhlI | GDGCHC | 1 cut(s) | 296 |
| MluCI | AATT | 3 cut(s) | 100, 269, 448 |
| MlyI | GAGTC | 1 cut(s) | 384 |
| MnlI | CCTC | 3 cut(s) | 107, 210, 336 |
| MseI | TTAA | 1 cut(s) | 17 |
| MslI | CAYNNNNRTG | 1 cut(s) | 315 |
| MspI | CCGG | 1 cut(s) | 24 |
| MspR9I | CCNGG | 1 cut(s) | 25 |
| Mva1269I | GAATGC | 1 cut(s) | 383 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 428 |
| NciI | CCSGG | 1 cut(s) | 25 |
| NdeI | CATATG | 1 cut(s) | 136 |
| NheI | GCTAGC | 1 cut(s) | 434 |
| NlaIII | CATG | 2 cut(s) | 254, 320 |
| NmuCI | GTSAC | 1 cut(s) | 376 |
| PagI | TCATGA | 1 cut(s) | 250 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 36 |
| PctI | GAATGC | 1 cut(s) | 383 |
| PkrI | GCNGC | 3 cut(s) | 348, 351, 433 |
| PleI | GAGTC | 1 cut(s) | 383 |
| PpsI | GAGTC | 1 cut(s) | 383 |
| Psp1406I | AACGTT | 1 cut(s) | 63 |
| RsaI | GTAC | 1 cut(s) | 148 |
| RsaNI | GTAC | 1 cut(s) | 147 |
| RseI | CAYNNNNRTG | 1 cut(s) | 315 |
| SaqAI | TTAA | 1 cut(s) | 17 |
| SatI | GCNGC | 3 cut(s) | 347, 350, 432 |
| SchI | GAGTC | 1 cut(s) | 384 |
| ScrFI | CCNGG | 1 cut(s) | 25 |
| SduI | GDGCHC | 1 cut(s) | 296 |
| SetI | ASST | 7 cut(s) | 48, 66, 99, 183, 221, 293, 436 |
| SfaNI | GCATC | 1 cut(s) | 369 |
| SfcI | CTRYAG | 1 cut(s) | 237 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 315 |
| Sse9I | AATT | 3 cut(s) | 100, 269, 448 |
| SsiI | CCGC | 1 cut(s) | 346 |
| SspMI | CTAG | 1 cut(s) | 435 |
| StyD4I | CCNGG | 1 cut(s) | 23 |
| TaaI | ACNGT | 1 cut(s) | 339 |
| TaiI | ACGT | 2 cut(s) | 66, 293 |
| TaqI | TCGA | 2 cut(s) | 30, 39 |
| TasI | AATT | 3 cut(s) | 100, 269, 448 |
| TatI | WGTACW | 1 cut(s) | 146 |
| TauI | GCSGC | 1 cut(s) | 349 |
| Tru1I | TTAA | 1 cut(s) | 17 |
| Tru9I | TTAA | 1 cut(s) | 17 |
| TscAI | CASTG | 1 cut(s) | 301 |
| TseFI | GTSAC | 1 cut(s) | 376 |
| TseI | GCWGC | 2 cut(s) | 349, 431 |
| Tsp45I | GTSAC | 1 cut(s) | 376 |
| TspDTI | ATGAA | 2 cut(s) | 239, 311 |
| TspRI | CASTG | 1 cut(s) | 301 |
| VneI | GTGCAC | 1 cut(s) | 292 |
| XapI | RAATTY | 1 cut(s) | 448 |
| XspI | CTAG | 1 cut(s) | 435 |