Cytochrome p450
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g28456 FvH4_7g28458 |
| prunus_persica | Prupe.2G285100_v2.0.a1 Prupe.3G021600_v2.0.a1 |
| pyrus_communis | pycom11g06300 |
| rosa_chinensis | RchiOBHm_Chr1g0359961 RchiOBHm_Chr1g0375421 RchiOBHm_Chr1g0375501 |
| rosa_multiflora | Rmu_sc0001644.1_g000034 Rmu_sc0003191.1_g000013 Rmu_sc0004191.1_g000013 Rmu_sc0008215.1_g000003 Rmu_sc0031070.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00282770 Rroxscaffold_4G00282850 Rroxscaffold_4G00296750 |
| rosa_samantha | Rh1AG287900 Rh1AG400700 Rh1AG401500 Rh1AG402300 Rh1AG403300 Rh1AG403400 Rh1AG403500 Rh1BG200800 Rh1BG253200 Rh1BG253300 Rh1BG363600 Rh1BG363700 Rh1BG366300 Rh1BG366400 Rh1BG366500 Rh1BG366900 Rh1BG367100 Rh1CG270600 Rh1CG270700 Rh1CG376900 Rh1CG379100 Rh1CG379200 Rh1CG379600 Rh1CG379900 Rh2BG274600 Rh2DG289700 Rh7BG011900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 224 |
| AclWI | GGATC | 1 cut(s) | 233 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 116 |
| AgsI | TTSAA | 1 cut(s) | 217 |
| AluBI | AGCT | 2 cut(s) | 50, 175 |
| AluI | AGCT | 2 cut(s) | 50, 175 |
| Alw21I | GWGCWC | 1 cut(s) | 132 |
| Alw44I | GTGCAC | 1 cut(s) | 128 |
| AlwI | GGATC | 1 cut(s) | 233 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 242 |
| ApaLI | GTGCAC | 1 cut(s) | 128 |
| BaeGI | GKGCMC | 2 cut(s) | 76, 132 |
| Bbv12I | GWGCWC | 1 cut(s) | 132 |
| BccI | CCATC | 1 cut(s) | 114 |
| BfaI | CTAG | 1 cut(s) | 150 |
| BfmI | CTRYAG | 1 cut(s) | 51 |
| BmsI | GCATC | 1 cut(s) | 192 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 116 |
| BseGI | GGATG | 1 cut(s) | 106 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 116 |
| BseMII | CTCAG | 1 cut(s) | 162 |
| BseSI | GKGCMC | 2 cut(s) | 76, 132 |
| BsgI | GTGCAG | 1 cut(s) | 140 |
| BsiHKAI | GWGCWC | 1 cut(s) | 132 |
| BsiSI | CCGG | 1 cut(s) | 117 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 116 |
| Bsp1286I | GDGCHC | 2 cut(s) | 76, 132 |
| Bsp143I | GATC | 1 cut(s) | 238 |
| BspACI | CCGC | 1 cut(s) | 224 |
| BspCNI | CTCAG | 1 cut(s) | 163 |
| BspPI | GGATC | 1 cut(s) | 233 |
| BssMI | GATC | 1 cut(s) | 238 |
| Bst4CI | ACNGT | 3 cut(s) | 22, 71, 124 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 242 |
| BstC8I | GCNNGC | 2 cut(s) | 177, 181 |
| BstDEI | CTNAG | 1 cut(s) | 171 |
| BstF5I | GGATG | 1 cut(s) | 106 |
| BstKTI | GATC | 1 cut(s) | 241 |
| BstMBI | GATC | 1 cut(s) | 238 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 242 |
| BstSFI | CTRYAG | 1 cut(s) | 51 |
| BstSLI | GKGCMC | 2 cut(s) | 76, 132 |
| BstX2I | RGATCY | 1 cut(s) | 238 |
| BstYI | RGATCY | 1 cut(s) | 238 |
| BtsCI | GGATG | 1 cut(s) | 106 |
| Cac8I | GCNNGC | 2 cut(s) | 177, 181 |
| CaiI | CAGNNNCTG | 1 cut(s) | 242 |
| CviAII | CATG | 1 cut(s) | 166 |
| CviJI | RGCY | 2 cut(s) | 50, 175 |
| CviKI_1 | RGCY | 2 cut(s) | 50, 175 |
| DdeI | CTNAG | 1 cut(s) | 171 |
| DpnI | GATC | 1 cut(s) | 240 |
| DpnII | GATC | 1 cut(s) | 238 |
| FaeI | CATG | 1 cut(s) | 169 |
| FaiI | YATR | 4 cut(s) | 167, 258, 285, 295 |
| FatI | CATG | 1 cut(s) | 165 |
| FokI | GGATG | 1 cut(s) | 93 |
| FspBI | CTAG | 1 cut(s) | 150 |
| HapII | CCGG | 1 cut(s) | 117 |
| Hin1II | CATG | 1 cut(s) | 169 |
| HpaII | CCGG | 1 cut(s) | 117 |
| Hpy166II | GTNNAC | 2 cut(s) | 130, 229 |
| Hpy8I | GTNNAC | 2 cut(s) | 130, 229 |
| HpyCH4III | ACNGT | 3 cut(s) | 22, 71, 124 |
| HpyCH4V | TGCA | 4 cut(s) | 130, 157, 183, 245 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 242 |
| HpyF3I | CTNAG | 1 cut(s) | 171 |
| Hsp92II | CATG | 1 cut(s) | 169 |
| Kzo9I | GATC | 1 cut(s) | 238 |
| LpnPI | CCDG | 2 cut(s) | 130, 255 |
| LweI | GCATC | 1 cut(s) | 192 |
| MaeI | CTAG | 1 cut(s) | 150 |
| MaeIII | GTNAC | 1 cut(s) | 86 |
| MalI | GATC | 1 cut(s) | 240 |
| MboI | GATC | 1 cut(s) | 238 |
| MflI | RGATCY | 1 cut(s) | 238 |
| MhlI | GDGCHC | 2 cut(s) | 76, 132 |
| MluCI | AATT | 2 cut(s) | 80, 280 |
| MspI | CCGG | 1 cut(s) | 117 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 242 |
| NdeII | GATC | 1 cut(s) | 238 |
| NlaIII | CATG | 1 cut(s) | 169 |
| NmuCI | GTSAC | 1 cut(s) | 86 |
| PstNI | CAGNNNCTG | 1 cut(s) | 242 |
| PsuI | RGATCY | 1 cut(s) | 238 |
| Sau3AI | GATC | 1 cut(s) | 238 |
| SduI | GDGCHC | 2 cut(s) | 76, 132 |
| SetI | ASST | 4 cut(s) | 52, 177, 223, 294 |
| SfaNI | GCATC | 1 cut(s) | 192 |
| SfcI | CTRYAG | 1 cut(s) | 51 |
| Sse9I | AATT | 2 cut(s) | 80, 280 |
| SsiI | CCGC | 1 cut(s) | 224 |
| SspMI | CTAG | 1 cut(s) | 150 |
| TaaI | ACNGT | 3 cut(s) | 22, 71, 124 |
| TaqI | TCGA | 1 cut(s) | 207 |
| TasI | AATT | 2 cut(s) | 80, 280 |
| TseFI | GTSAC | 1 cut(s) | 86 |
| Tsp45I | GTSAC | 1 cut(s) | 86 |
| VneI | GTGCAC | 1 cut(s) | 128 |
| XspI | CTAG | 1 cut(s) | 150 |