Rh2BG274600

cytochrome P450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0002278
Physical Location & Seq
Reverse (-)
29856806 .. 29857366
561 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG274600.1

Sequence Viewer

Length: 339 bp
ATGGATTTTCTTTCCACTCCTTTACCTCCCATTGCAATAGGTTTATTAGCAGTACTTGTTTTGGCAGTAATCTTTCTGCGGAAGAAGAACAAGAAATACCCTCCTGTTGCCGGAACTGTCATACACCAACTGATCAATGTTCCAAGGCTGCACCATTACATGACTGAGCTTGCATGCAAGTACAAAACTTATAGGATGCTCGACTTGTTCAGATATGCTGTCTACACTGTAGATCCTGCAAATGTTGAATACATTCTCAAAACAAACTTTGCAAACTATGGCAAGGTATGTAAAGGATCGGAGAAATTAATCTATTCTATTTTGAATTTTTCAATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

112

Amino Acids

12.82

Weight (kDa)

9.6

Isoelectric Point (pI)

31.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 222
AciI CCGC 1 cut(s) 79
AclWI GGATC 2 cut(s) 227, 304
AcsI RAATTY 1 cut(s) 325
AfaI GTAC 2 cut(s) 54, 182
AfiI CCNNNNNNNGG 1 cut(s) 110
AgsI TTSAA 3 cut(s) 248, 325, 333
AluBI AGCT 1 cut(s) 169
AluI AGCT 1 cut(s) 169
AlwI GGATC 2 cut(s) 227, 304
ApeKI GCWGC 1 cut(s) 148
ApoI RAATTY 1 cut(s) 325
AseI ATTAAT 1 cut(s) 308
Asp700I GAANNNNTTC 1 cut(s) 252
BbvI GCAGC 1 cut(s) 135
BclI TGATCA 1 cut(s) 132
BfmI CTRYAG 1 cut(s) 228
BisI GCNGC 1 cut(s) 149
BlsI GCNGC 1 cut(s) 150
BmcAI AGTACT 1 cut(s) 54
BmsI GCATC 1 cut(s) 186
BsaJI CCNNGG 1 cut(s) 143
Bsc4I CCNNNNNNNGG 1 cut(s) 110
Bse3DI GCAATG 1 cut(s) 30
BseDI CCNNGG 1 cut(s) 143
BseGI GGATG 1 cut(s) 201
BseLI CCNNNNNNNGG 1 cut(s) 110
BseMI GCAATG 1 cut(s) 30
BseMII CTCAG 1 cut(s) 156
BseXI GCAGC 1 cut(s) 135
BsgI GTGCAG 1 cut(s) 134
BsiSI CCGG 1 cut(s) 111
BslI CCNNNNNNNGG 1 cut(s) 110
Bsp143I GATC 3 cut(s) 132, 232, 296
BspACI CCGC 1 cut(s) 79
BspCNI CTCAG 1 cut(s) 157
BspPI GGATC 2 cut(s) 227, 304
BsrDI GCAATG 1 cut(s) 30
BssECI CCNNGG 1 cut(s) 143
BssMI GATC 3 cut(s) 132, 232, 296
BssT1I CCWWGG 1 cut(s) 143
Bst4CI ACNGT 2 cut(s) 118, 229
BstC8I GCNNGC 2 cut(s) 171, 175
BstDEI CTNAG 1 cut(s) 165
BstF5I GGATG 1 cut(s) 201
BstKTI GATC 3 cut(s) 135, 235, 299
BstMBI GATC 3 cut(s) 132, 232, 296
BstNSI RCATGY 1 cut(s) 177
BstSFI CTRYAG 1 cut(s) 228
BstV1I GCAGC 1 cut(s) 135
BstX2I RGATCY 1 cut(s) 232
BstYI RGATCY 1 cut(s) 232
BtsCI GGATG 1 cut(s) 201
BtsIMutI CAGTG 1 cut(s) 225
Cac8I GCNNGC 2 cut(s) 171, 175
Csp6I GTAC 2 cut(s) 53, 181
CviAII CATG 2 cut(s) 160, 174
CviJI RGCY 2 cut(s) 148, 169
CviKI_1 RGCY 2 cut(s) 148, 169
CviQI GTAC 2 cut(s) 53, 181
DdeI CTNAG 1 cut(s) 165
DpnI GATC 3 cut(s) 134, 234, 298
DpnII GATC 3 cut(s) 132, 232, 296
Eco130I CCWWGG 1 cut(s) 143
EcoT14I CCWWGG 1 cut(s) 143
ErhI CCWWGG 1 cut(s) 143
FaeI CATG 2 cut(s) 163, 177
FaiI YATR 8 cut(s) 122, 161, 175, 192, 216, 279, 289, 337
FatI CATG 2 cut(s) 159, 173
FbaI TGATCA 1 cut(s) 132
FblI GTMKAC 1 cut(s) 222
Fnu4HI GCNGC 1 cut(s) 149
FokI GGATG 1 cut(s) 208
Fsp4HI GCNGC 1 cut(s) 149
GluI GCNGC 1 cut(s) 149
HapII CCGG 1 cut(s) 111
Hin1II CATG 2 cut(s) 163, 177
HpaII CCGG 1 cut(s) 111
Hpy166II GTNNAC 1 cut(s) 223
Hpy188I TCNGA 2 cut(s) 212, 301
Hpy8I GTNNAC 1 cut(s) 223
HpyCH4III ACNGT 2 cut(s) 118, 229
HpyCH4V TGCA 6 cut(s) 35, 151, 173, 177, 239, 272
HpyF3I CTNAG 1 cut(s) 165
Hsp92II CATG 2 cut(s) 163, 177
Ksp22I TGATCA 1 cut(s) 132
Kzo9I GATC 3 cut(s) 132, 232, 296
LpnPI CCDG 3 cut(s) 117, 124, 249
Lsp1109I GCAGC 1 cut(s) 135
LweI GCATC 1 cut(s) 186
MalI GATC 3 cut(s) 134, 234, 298
MboI GATC 3 cut(s) 132, 232, 296
MboII GAAGA 2 cut(s) 94, 97
MflI RGATCY 1 cut(s) 232
MluCI AATT 2 cut(s) 305, 325
MnlI CCTC 2 cut(s) 36, 111
MroXI GAANNNNTTC 1 cut(s) 252
MseI TTAA 1 cut(s) 308
MspI CCGG 1 cut(s) 111
NdeII GATC 3 cut(s) 132, 232, 296
NlaIII CATG 2 cut(s) 163, 177
NspI RCATGY 1 cut(s) 177
PaeI GCATGC 1 cut(s) 177
PdmI GAANNNNTTC 1 cut(s) 252
PkrI GCNGC 1 cut(s) 150
PshBI ATTAAT 1 cut(s) 308
PsrI GAACNNNNNNTAC 2 cut(s) 80, 112
PsuI RGATCY 1 cut(s) 232
RsaI GTAC 2 cut(s) 54, 182
RsaNI GTAC 2 cut(s) 53, 181
SaqAI TTAA 1 cut(s) 308
SatI GCNGC 1 cut(s) 149
Sau3AI GATC 3 cut(s) 132, 232, 296
ScaI AGTACT 1 cut(s) 54
SetI ASST 4 cut(s) 28, 43, 171, 288
SfaNI GCATC 1 cut(s) 186
SfcI CTRYAG 1 cut(s) 228
SphI GCATGC 1 cut(s) 177
Sse9I AATT 2 cut(s) 305, 325
SsiI CCGC 1 cut(s) 79
StyI CCWWGG 1 cut(s) 143
TaaI ACNGT 2 cut(s) 118, 229
TaqI TCGA 1 cut(s) 201
TasI AATT 2 cut(s) 305, 325
TatI WGTACW 2 cut(s) 52, 180
Tru1I TTAA 1 cut(s) 308
Tru9I TTAA 1 cut(s) 308
TscAI CASTG 1 cut(s) 232
TseI GCWGC 1 cut(s) 148
TspRI CASTG 1 cut(s) 232
VspI ATTAAT 1 cut(s) 308
XapI RAATTY 1 cut(s) 325
XceI RCATGY 1 cut(s) 177
XmiI GTMKAC 1 cut(s) 222
XmnI GAANNNNTTC 1 cut(s) 252
ZrmI AGTACT 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.