Rh1BG366300

cytochrome P450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0002278
Physical Location & Seq
Forward (+)
49549705 .. 49553363
3659 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG366300.1

Sequence Viewer

Length: 291 bp
ATGGATTTTCTTTCCACTGCTTTACCACCCACAGCAATAAGTTTAGCTGTAATACTCTTGGCCGTTATTTTTTGGCCGGCGAAGAACAAGAGGTACCCTCCTATTGCCGGAACTGTCTTGCACCAAGTCATCAATTTCCCAAGGCTGCATCATTACCACGCTGAGCTTGCATGCAAGTACAAAACTTACAGGATACTAGACTTGTTCAAACATGCTGTCTACACAGTAGATCCTGCAAATGTGCAATACATACTCAAAACAAATGTTGCAAACTATGGCAAGAAGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

96

Amino Acids

10.95

Weight (kDa)

9.59

Isoelectric Point (pI)

28.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 93
AccB1I GGYRCC 1 cut(s) 93
AccI GTMKAC 1 cut(s) 219
AclWI GGATC 1 cut(s) 224
AcoI YGGCCR 2 cut(s) 60, 74
AfaI GTAC 2 cut(s) 95, 179
AfiI CCNNNNNNNGG 1 cut(s) 107
AgsI TTSAA 1 cut(s) 208
AluBI AGCT 2 cut(s) 47, 166
AluI AGCT 2 cut(s) 47, 166
AlwI GGATC 1 cut(s) 224
AoxI GGCC 2 cut(s) 60, 74
ApeKI GCWGC 1 cut(s) 145
ArsI GACNNNNNNTTYG 2 cut(s) 201, 233
Asp718I GGTACC 1 cut(s) 93
BanI GGYRCC 1 cut(s) 93
BbvI GCAGC 1 cut(s) 132
BceAI ACGGC 1 cut(s) 47
BciVI GTATCC 1 cut(s) 186
BfaI CTAG 1 cut(s) 197
BfuI GTATCC 1 cut(s) 186
BisI GCNGC 1 cut(s) 146
BlpI GCTNAGC 1 cut(s) 162
BlsI GCNGC 1 cut(s) 147
BmiI GGNNCC 1 cut(s) 95
BmsI GCATC 1 cut(s) 157
BplI GAGNNNNNCTC 2 cut(s) 82, 114
Bpu1102I GCTNAGC 1 cut(s) 162
BsaJI CCNNGG 1 cut(s) 140
Bsc4I CCNNNNNNNGG 1 cut(s) 107
Bse118I RCCGGY 1 cut(s) 76
BseDI CCNNGG 1 cut(s) 140
BseLI CCNNNNNNNGG 1 cut(s) 107
BseMII CTCAG 1 cut(s) 153
BseXI GCAGC 1 cut(s) 132
BshFI GGCC 2 cut(s) 62, 76
BshNI GGYRCC 1 cut(s) 93
BsiSI CCGG 2 cut(s) 77, 108
BslI CCNNNNNNNGG 1 cut(s) 107
BsnI GGCC 2 cut(s) 62, 76
Bsp143I GATC 1 cut(s) 229
Bsp1720I GCTNAGC 1 cut(s) 162
BspANI GGCC 2 cut(s) 62, 76
BspCNI CTCAG 1 cut(s) 154
BspLI GGNNCC 1 cut(s) 95
BspPI GGATC 1 cut(s) 224
BspT107I GGYRCC 1 cut(s) 93
BsrFI RCCGGY 1 cut(s) 76
BssAI RCCGGY 1 cut(s) 76
BssECI CCNNGG 1 cut(s) 140
BssMI GATC 1 cut(s) 229
BssT1I CCWWGG 1 cut(s) 140
Bst4CI ACNGT 2 cut(s) 115, 226
BstC8I GCNNGC 3 cut(s) 78, 168, 172
BstDEI CTNAG 1 cut(s) 162
BstKTI GATC 1 cut(s) 232
BstMBI GATC 1 cut(s) 229
BstMWI GCNNNNNNNGC 1 cut(s) 167
BstNSI RCATGY 2 cut(s) 174, 215
BstV1I GCAGC 1 cut(s) 132
BstX2I RGATCY 1 cut(s) 229
BstYI RGATCY 1 cut(s) 229
BsuI GTATCC 1 cut(s) 186
BsuRI GGCC 2 cut(s) 62, 76
BtsI GCAGTG 1 cut(s) 15
BtsIMutI CAGTG 1 cut(s) 15
Cac8I GCNNGC 3 cut(s) 78, 168, 172
Cfr10I RCCGGY 1 cut(s) 76
Csp6I GTAC 2 cut(s) 94, 178
CviAII CATG 2 cut(s) 171, 212
CviJI RGCY 5 cut(s) 47, 62, 76, 145, 166
CviKI_1 RGCY 5 cut(s) 47, 62, 76, 145, 166
CviQI GTAC 2 cut(s) 94, 178
DdeI CTNAG 1 cut(s) 162
DpnI GATC 1 cut(s) 231
DpnII GATC 1 cut(s) 229
EaeI YGGCCR 2 cut(s) 60, 74
Eco130I CCWWGG 1 cut(s) 140
EcoT14I CCWWGG 1 cut(s) 140
ErhI CCWWGG 1 cut(s) 140
FaeI CATG 2 cut(s) 174, 215
FaiI YATR 4 cut(s) 172, 213, 251, 276
FatI CATG 2 cut(s) 170, 211
FblI GTMKAC 1 cut(s) 219
Fnu4HI GCNGC 1 cut(s) 146
Fsp4HI GCNGC 1 cut(s) 146
FspBI CTAG 1 cut(s) 197
GluI GCNGC 1 cut(s) 146
HaeIII GGCC 2 cut(s) 62, 76
HapII CCGG 2 cut(s) 77, 108
Hin1II CATG 2 cut(s) 174, 215
HpaII CCGG 2 cut(s) 77, 108
Hpy166II GTNNAC 1 cut(s) 220
Hpy8I GTNNAC 1 cut(s) 220
HpyAV CCTTC 1 cut(s) 277
HpyCH4III ACNGT 2 cut(s) 115, 226
HpyCH4V TGCA 7 cut(s) 121, 148, 170, 174, 236, 244, 269
HpyF10VI GCNNNNNNNGC 1 cut(s) 167
HpyF3I CTNAG 1 cut(s) 162
Hsp92II CATG 2 cut(s) 174, 215
KpnI GGTACC 1 cut(s) 97
KroI GCCGGC 1 cut(s) 76
KroNI GCCGGC 1 cut(s) 78
Kzo9I GATC 1 cut(s) 229
LpnPI CCDG 4 cut(s) 90, 121, 175, 246
Lsp1109I GCAGC 1 cut(s) 132
LweI GCATC 1 cut(s) 157
MaeI CTAG 1 cut(s) 197
MalI GATC 1 cut(s) 231
MboI GATC 1 cut(s) 229
MboII GAAGA 1 cut(s) 94
MflI RGATCY 1 cut(s) 229
MluCI AATT 1 cut(s) 133
MnlI CCTC 2 cut(s) 84, 108
MroNI GCCGGC 1 cut(s) 76
MspI CCGG 2 cut(s) 77, 108
MwoI GCNNNNNNNGC 1 cut(s) 167
NaeI GCCGGC 1 cut(s) 78
NdeII GATC 1 cut(s) 229
NgoMIV GCCGGC 1 cut(s) 76
NlaIII CATG 2 cut(s) 174, 215
NlaIV GGNNCC 1 cut(s) 95
NspI RCATGY 2 cut(s) 174, 215
PaeI GCATGC 1 cut(s) 174
PdiI GCCGGC 1 cut(s) 78
PkrI GCNGC 1 cut(s) 147
PspN4I GGNNCC 1 cut(s) 95
PsrI GAACNNNNNNTAC 2 cut(s) 77, 109
PsuI RGATCY 1 cut(s) 229
RsaI GTAC 2 cut(s) 95, 179
RsaNI GTAC 2 cut(s) 94, 178
SatI GCNGC 1 cut(s) 146
Sau3AI GATC 1 cut(s) 229
SetI ASST 3 cut(s) 49, 95, 168
SfaNI GCATC 1 cut(s) 157
SphI GCATGC 1 cut(s) 174
Sse9I AATT 1 cut(s) 133
SspMI CTAG 1 cut(s) 197
StyI CCWWGG 1 cut(s) 140
TaaI ACNGT 2 cut(s) 115, 226
TasI AATT 1 cut(s) 133
TatI WGTACW 1 cut(s) 177
TscAI CASTG 1 cut(s) 22
TseI GCWGC 1 cut(s) 145
TspRI CASTG 1 cut(s) 22
XceI RCATGY 2 cut(s) 174, 215
XmiI GTMKAC 1 cut(s) 219
XspI CTAG 1 cut(s) 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.