Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 668, 1518, 1731 |
| Acc16I | TGCGCA | 2 cut(s) | 2379, 2646 |
| Acc36I | ACCTGC | 1 cut(s) | 2371 |
| AccB1I | GGYRCC | 1 cut(s) | 1573 |
| AccI | GTMKAC | 1 cut(s) | 1836 |
| AciI | CCGC | 3 cut(s) | 796, 949, 1549 |
| AclI | AACGTT | 1 cut(s) | 1257 |
| AcsI | RAATTY | 7 cut(s) | 1736, 1827, 1889, 1977, 1988, 2009, 2620 |
| AcuI | CTGAAG | 4 cut(s) | 1904, 2247, 2649, 2703 |
| AcyI | GRCGYC | 1 cut(s) | 525 |
| AdeI | CACNNNGTG | 1 cut(s) | 52 |
| AfaI | GTAC | 8 cut(s) | 319, 811, 967, 1001, 1216, 1639, 1819, 2280 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 413, 1198, 2053, 2361, 2362, 2418 |
| AjnI | CCWGG | 3 cut(s) | 961, 1087, 1433 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1766, 1798, 2021, 2053 |
| AleI | CACNNNNGTG | 1 cut(s) | 1194 |
| Alw21I | GWGCWC | 2 cut(s) | 1327, 2157 |
| Alw26I | GTCTC | 2 cut(s) | 1521, 1673 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2386 |
| Ama87I | CYCGRG | 1 cut(s) | 728 |
| AoxI | GGCC | 3 cut(s) | 626, 1770, 2670 |
| ApeKI | GCWGC | 5 cut(s) | 502, 946, 1644, 1862, 2549 |
| ApoI | RAATTY | 7 cut(s) | 1736, 1827, 1889, 1977, 1988, 2009, 2620 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 216, 1977, 1992, 2168 |
| AspLEI | GCGC | 2 cut(s) | 2380, 2647 |
| AspS9I | GGNCC | 3 cut(s) | 388, 627, 777 |
| AsuHPI | GGTGA | 5 cut(s) | 773, 1208, 1574, 1988, 2542 |
| AvaI | CYCGRG | 1 cut(s) | 728 |
| AvaII | GGWCC | 2 cut(s) | 388, 777 |
| AxyI | CCTNAGG | 3 cut(s) | 1845, 2208, 2526 |
| BamHI | GGATCC | 2 cut(s) | 1582, 1777 |
| BanI | GGYRCC | 1 cut(s) | 1573 |
| BanII | GRGCYC | 2 cut(s) | 2157, 2402 |
| BbsI | GAAGAC | 2 cut(s) | 209, 248 |
| Bbv12I | GWGCWC | 2 cut(s) | 1327, 2157 |
| BbvI | GCAGC | 5 cut(s) | 514, 933, 1631, 1874, 2561 |
| BciT130I | CCWGG | 3 cut(s) | 963, 1089, 1435 |
| BclI | TGATCA | 4 cut(s) | 555, 565, 603, 976 |
| BcoDI | GTCTC | 2 cut(s) | 1521, 1673 |
| BfaI | CTAG | 3 cut(s) | 290, 845, 1832 |
| BfmI | CTRYAG | 2 cut(s) | 500, 1821 |
| BfuAI | ACCTGC | 1 cut(s) | 2371 |
| BisI | GCNGC | 6 cut(s) | 503, 947, 950, 1645, 1863, 2550 |
| BlsI | GCNGC | 6 cut(s) | 504, 948, 951, 1646, 1864, 2551 |
| BmcAI | AGTACT | 3 cut(s) | 811, 1216, 1819 |
| Bme1390I | CCNGG | 3 cut(s) | 963, 1089, 1435 |
| Bme18I | GGWCC | 2 cut(s) | 388, 777 |
| BmeT110I | CYCGRG | 1 cut(s) | 728 |
| BmgT120I | GGNCC | 3 cut(s) | 388, 627, 777 |
| BmiI | GGNNCC | 6 cut(s) | 389, 583, 1575, 1584, 1779, 2205 |
| BmrFI | CCNGG | 3 cut(s) | 963, 1089, 1435 |
| BmrI | ACTGGG | 1 cut(s) | 1147 |
| BmsI | GCATC | 4 cut(s) | 271, 273, 556, 754 |
| BmuI | ACTGGG | 1 cut(s) | 1147 |
| BpiI | GAAGAC | 2 cut(s) | 209, 248 |
| BpmI | CTGGAG | 4 cut(s) | 296, 1953, 2238, 2483 |
| Bpu10I | CCTNAGC | 1 cut(s) | 348 |
| BpuEI | CTTGAG | 5 cut(s) | 23, 775, 2003, 2171, 2378 |
| BsaBI | GATNNNNATC | 1 cut(s) | 570 |
| BsaHI | GRCGYC | 1 cut(s) | 525 |
| BsaJI | CCNNGG | 5 cut(s) | 1038, 1192, 1586, 1773, 2047 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2100, 2130 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 413, 1198, 2053, 2361, 2362, 2418 |
| Bse1I | ACTGG | 6 cut(s) | 1153, 1212, 1445, 1495, 1609, 2323 |
| Bse21I | CCTNAGG | 3 cut(s) | 1845, 2208, 2526 |
| Bse3DI | GCAATG | 2 cut(s) | 366, 1533 |
| Bse8I | GATNNNNATC | 1 cut(s) | 570 |
| BseBI | CCWGG | 3 cut(s) | 963, 1089, 1435 |
| BseDI | CCNNGG | 5 cut(s) | 1038, 1192, 1586, 1773, 2047 |
| BseGI | GGATG | 2 cut(s) | 286, 1384 |
| BseJI | GATNNNNATC | 1 cut(s) | 570 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 413, 1198, 2053, 2361, 2362, 2418 |
| BseMI | GCAATG | 2 cut(s) | 366, 1533 |
| BseMII | CTCAG | 7 cut(s) | 469, 704, 1164, 1702, 1836, 2199, 2517 |
| BseNI | ACTGG | 6 cut(s) | 1153, 1212, 1445, 1495, 1609, 2323 |
| BseRI | GAGGAG | 2 cut(s) | 70, 1862 |
| BseXI | GCAGC | 5 cut(s) | 514, 933, 1631, 1874, 2561 |
| BsgI | GTGCAG | 1 cut(s) | 1630 |
| BshFI | GGCC | 3 cut(s) | 628, 1772, 2672 |
| BshNI | GGYRCC | 1 cut(s) | 1573 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1327, 2157 |
| BsiHKCI | CYCGRG | 1 cut(s) | 728 |
| BslFI | GGGAC | 8 cut(s) | 317, 401, 473, 842, 1303, 1493, 1501, 1672 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 413, 1198, 2053, 2361, 2362, 2418 |
| BsmAI | GTCTC | 2 cut(s) | 1521, 1673 |
| BsmFI | GGGAC | 8 cut(s) | 317, 401, 473, 842, 1303, 1493, 1501, 1672 |
| BsmI | GAATGC | 1 cut(s) | 1177 |
| BsnI | GGCC | 3 cut(s) | 628, 1772, 2672 |
| BsoBI | CYCGRG | 1 cut(s) | 728 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1327, 2157, 2402 |
| Bsp19I | CCATGG | 2 cut(s) | 1038, 1192 |
| BspACI | CCGC | 3 cut(s) | 796, 949, 1549 |
| BspANI | GGCC | 3 cut(s) | 628, 1772, 2672 |
| BspCNI | CTCAG | 7 cut(s) | 468, 703, 1165, 1701, 1837, 2200, 2518 |
| BspHI | TCATGA | 1 cut(s) | 558 |
| BspLI | GGNNCC | 6 cut(s) | 389, 583, 1575, 1584, 1779, 2205 |
| BspMAI | CTGCAG | 1 cut(s) | 504 |
| BspMI | ACCTGC | 1 cut(s) | 2371 |
| BspT107I | GGYRCC | 1 cut(s) | 1573 |
| BsrDI | GCAATG | 2 cut(s) | 366, 1533 |
| BsrI | ACTGG | 6 cut(s) | 1153, 1212, 1445, 1495, 1609, 2323 |
| BssECI | CCNNGG | 5 cut(s) | 1038, 1192, 1586, 1773, 2047 |
| BssNI | GRCGYC | 1 cut(s) | 525 |
| BssT1I | CCWWGG | 4 cut(s) | 1038, 1192, 1773, 2047 |
| Bst2UI | CCWGG | 3 cut(s) | 963, 1089, 1435 |
| Bst4CI | ACNGT | 7 cut(s) | 1032, 1107, 1624, 1651, 1817, 1822, 2418 |
| Bst6I | CTCTTC | 2 cut(s) | 2126, 2689 |
| BstACI | GRCGYC | 1 cut(s) | 525 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1148 |
| BstC8I | GCNNGC | 2 cut(s) | 442, 906 |
| BstDSI | CCRYGG | 3 cut(s) | 1038, 1192, 1586 |
| BstF5I | GGATG | 2 cut(s) | 286, 1384 |
| BstHHI | GCGC | 2 cut(s) | 2380, 2647 |
| BstMAI | GTCTC | 2 cut(s) | 1521, 1673 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 290, 371, 634, 958, 1148, 2489 |
| BstNI | CCWGG | 3 cut(s) | 963, 1089, 1435 |
| BstNSI | RCATGY | 1 cut(s) | 1927 |
| BstSCI | CCNGG | 3 cut(s) | 961, 1087, 1433 |
| BstSFI | CTRYAG | 2 cut(s) | 500, 1821 |
| BstV1I | GCAGC | 5 cut(s) | 514, 933, 1631, 1874, 2561 |
| BstV2I | GAAGAC | 2 cut(s) | 209, 248 |
| BstX2I | RGATCY | 6 cut(s) | 571, 643, 1582, 1777, 2428, 2614 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1160 |
| BstYI | RGATCY | 6 cut(s) | 571, 643, 1582, 1777, 2428, 2614 |
| Bsu36I | CCTNAGG | 3 cut(s) | 1845, 2208, 2526 |
| BsuRI | GGCC | 3 cut(s) | 628, 1772, 2672 |
| BtgI | CCRYGG | 3 cut(s) | 1038, 1192, 1586 |
| BtgZI | GCGATG | 2 cut(s) | 2607, 2613 |
| BtsCI | GGATG | 2 cut(s) | 286, 1384 |
| BtsIMutI | CAGTG | 2 cut(s) | 2293, 2414 |
| BveI | ACCTGC | 1 cut(s) | 2371 |
| Cac8I | GCNNGC | 2 cut(s) | 442, 906 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2386 |
| CciI | TCATGA | 1 cut(s) | 558 |
| CfoI | GCGC | 2 cut(s) | 2380, 2647 |
| Cfr13I | GGNCC | 3 cut(s) | 388, 627, 777 |
| CseI | GACGC | 1 cut(s) | 533 |
| CsiI | ACCWGGT | 1 cut(s) | 1433 |
| Csp6I | GTAC | 8 cut(s) | 318, 810, 966, 1000, 1215, 1638, 1818, 2279 |
| CviAII | CATG | 6 cut(s) | 559, 1039, 1193, 1316, 1924, 2567 |
| CviQI | GTAC | 8 cut(s) | 318, 810, 966, 1000, 1215, 1638, 1818, 2279 |
| DraIII | CACNNNGTG | 1 cut(s) | 52 |
| Eam1104I | CTCTTC | 2 cut(s) | 2126, 2689 |
| EarI | CTCTTC | 2 cut(s) | 2126, 2689 |
| Ecl136II | GAGCTC | 1 cut(s) | 2155 |
| Eco130I | CCWWGG | 4 cut(s) | 1038, 1192, 1773, 2047 |
| Eco24I | GRGCYC | 2 cut(s) | 2157, 2402 |
| Eco47I | GGWCC | 2 cut(s) | 388, 777 |
| Eco53kI | GAGCTC | 1 cut(s) | 2155 |
| Eco57I | CTGAAG | 4 cut(s) | 1904, 2247, 2649, 2703 |
| Eco81I | CCTNAGG | 3 cut(s) | 1845, 2208, 2526 |
| Eco88I | CYCGRG | 1 cut(s) | 728 |
| EcoICRI | GAGCTC | 1 cut(s) | 2155 |
| EcoRI | GAATTC | 3 cut(s) | 1988, 2009, 2620 |
| EcoRII | CCWGG | 3 cut(s) | 961, 1087, 1433 |
| EcoT14I | CCWWGG | 4 cut(s) | 1038, 1192, 1773, 2047 |
| EcoT38I | GRGCYC | 2 cut(s) | 2157, 2402 |
| ErhI | CCWWGG | 4 cut(s) | 1038, 1192, 1773, 2047 |
| FaeI | CATG | 6 cut(s) | 562, 1042, 1196, 1319, 1927, 2570 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 305, 337, 737, 769, 1112, 1144, 2461, 2493 |
| FaqI | GGGAC | 8 cut(s) | 317, 401, 473, 842, 1303, 1493, 1501, 1672 |
| FatI | CATG | 6 cut(s) | 558, 1038, 1192, 1315, 1923, 2566 |
| FbaI | TGATCA | 4 cut(s) | 555, 565, 603, 976 |
| FblI | GTMKAC | 1 cut(s) | 1836 |
| Fnu4HI | GCNGC | 6 cut(s) | 503, 947, 950, 1645, 1863, 2550 |
| FokI | GGATG | 2 cut(s) | 293, 1391 |
| FriOI | GRGCYC | 2 cut(s) | 2157, 2402 |
| Fsp4HI | GCNGC | 6 cut(s) | 503, 947, 950, 1645, 1863, 2550 |
| FspBI | CTAG | 3 cut(s) | 290, 845, 1832 |
| FspI | TGCGCA | 2 cut(s) | 2379, 2646 |
| GlaI | GCGC | 2 cut(s) | 2379, 2646 |
| GluI | GCNGC | 6 cut(s) | 503, 947, 950, 1645, 1863, 2550 |
| GsuI | CTGGAG | 4 cut(s) | 296, 1953, 2238, 2483 |
| HaeIII | GGCC | 3 cut(s) | 628, 1772, 2672 |
| HgaI | GACGC | 1 cut(s) | 533 |
| HhaI | GCGC | 2 cut(s) | 2380, 2647 |
| Hin1I | GRCGYC | 1 cut(s) | 525 |
| Hin1II | CATG | 6 cut(s) | 562, 1042, 1196, 1319, 1927, 2570 |
| Hin6I | GCGC | 2 cut(s) | 2378, 2645 |
| HinP1I | GCGC | 2 cut(s) | 2378, 2645 |
| HincII | GTYRAC | 2 cut(s) | 1015, 2328 |
| HindII | GTYRAC | 2 cut(s) | 1015, 2328 |
| HindIII | AAGCTT | 4 cut(s) | 738, 751, 989, 2078 |
| HphI | GGTGA | 5 cut(s) | 773, 1208, 1574, 1988, 2542 |
| Hpy166II | GTNNAC | 6 cut(s) | 164, 318, 1015, 1837, 2251, 2328 |
| Hpy8I | GTNNAC | 6 cut(s) | 164, 318, 1015, 1837, 2251, 2328 |
| Hpy99I | CGWCG | 1 cut(s) | 527 |
| HpyAV | CCTTC | 9 cut(s) | 294, 657, 739, 815, 976, 1277, 1472, 2419, 2644 |
| HpyCH4III | ACNGT | 7 cut(s) | 1032, 1107, 1624, 1651, 1817, 1822, 2418 |
| HpyCH4IV | ACGT | 5 cut(s) | 867, 883, 998, 1257, 2659 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 290, 371, 634, 958, 1148, 2489 |
| HpySE526I | ACGT | 5 cut(s) | 867, 883, 998, 1257, 2659 |
| Hsp92I | GRCGYC | 1 cut(s) | 525 |
| Hsp92II | CATG | 6 cut(s) | 562, 1042, 1196, 1319, 1927, 2570 |
| HspAI | GCGC | 2 cut(s) | 2378, 2645 |
| Ksp22I | TGATCA | 4 cut(s) | 555, 565, 603, 976 |
| LmnI | GCTCC | 8 cut(s) | 57, 587, 1021, 1497, 1699, 2203, 2219, 2527 |
| Lsp1109I | GCAGC | 5 cut(s) | 514, 933, 1631, 1874, 2561 |
| LweI | GCATC | 4 cut(s) | 271, 273, 556, 754 |
| MabI | ACCWGGT | 1 cut(s) | 1433 |
| MaeI | CTAG | 3 cut(s) | 290, 845, 1832 |
| MaeII | ACGT | 5 cut(s) | 867, 883, 998, 1257, 2659 |
| MaeIII | GTNAC | 3 cut(s) | 994, 1250, 1295 |
| MflI | RGATCY | 6 cut(s) | 571, 643, 1582, 1777, 2428, 2614 |
| MhlI | GDGCHC | 3 cut(s) | 1327, 2157, 2402 |
| MlyI | GAGTC | 5 cut(s) | 262, 299, 1285, 1754, 2706 |
| MmeI | TCCRAC | 3 cut(s) | 1475, 2019, 2034 |
| MroXI | GAANNNNTTC | 4 cut(s) | 216, 1977, 1992, 2168 |
| MseI | TTAA | 8 cut(s) | 182, 536, 681, 783, 1119, 1260, 1557, 1953 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1194, 1226, 1320, 1809 |
| MspR9I | CCNGG | 3 cut(s) | 963, 1089, 1435 |
| Mva1269I | GAATGC | 1 cut(s) | 1177 |
| MvaI | CCWGG | 3 cut(s) | 963, 1089, 1435 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 290, 371, 634, 958, 1148, 2489 |
| NcoI | CCATGG | 2 cut(s) | 1038, 1192 |
| NlaIII | CATG | 6 cut(s) | 562, 1042, 1196, 1319, 1927, 2570 |
| NlaIV | GGNNCC | 6 cut(s) | 389, 583, 1575, 1584, 1779, 2205 |
| NmeAIII | GCCGAG | 1 cut(s) | 1321 |
| NsbI | TGCGCA | 2 cut(s) | 2379, 2646 |
| NspI | RCATGY | 1 cut(s) | 1927 |
| OliI | CACNNNNGTG | 1 cut(s) | 1194 |
| PagI | TCATGA | 1 cut(s) | 558 |
| PctI | GAATGC | 1 cut(s) | 1177 |
| PdmI | GAANNNNTTC | 4 cut(s) | 216, 1977, 1992, 2168 |
| PfeI | GAWTC | 9 cut(s) | 107, 341, 490, 841, 1631, 1720, 2085, 2095, 2283 |
| PkrI | GCNGC | 6 cut(s) | 504, 948, 951, 1646, 1864, 2551 |
| PleI | GAGTC | 5 cut(s) | 261, 299, 1285, 1753, 2705 |
| PpsI | GAGTC | 5 cut(s) | 261, 299, 1285, 1753, 2705 |
| PsiI | TTATAA | 3 cut(s) | 668, 1518, 1731 |
| Psp124BI | GAGCTC | 1 cut(s) | 2157 |
| Psp1406I | AACGTT | 1 cut(s) | 1257 |
| Psp6I | CCWGG | 3 cut(s) | 961, 1087, 1433 |
| PspGI | CCWGG | 3 cut(s) | 961, 1087, 1433 |
| PspN4I | GGNNCC | 6 cut(s) | 389, 583, 1575, 1584, 1779, 2205 |
| PspPI | GGNCC | 3 cut(s) | 388, 627, 777 |
| PstI | CTGCAG | 1 cut(s) | 504 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2386 |
| PsuI | RGATCY | 6 cut(s) | 571, 643, 1582, 1777, 2428, 2614 |
| RsaI | GTAC | 8 cut(s) | 319, 811, 967, 1001, 1216, 1639, 1819, 2280 |
| RsaNI | GTAC | 8 cut(s) | 318, 810, 966, 1000, 1215, 1638, 1818, 2279 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1194, 1226, 1320, 1809 |
| SacI | GAGCTC | 1 cut(s) | 2157 |
| SaqAI | TTAA | 8 cut(s) | 182, 536, 681, 783, 1119, 1260, 1557, 1953 |
| SatI | GCNGC | 6 cut(s) | 503, 947, 950, 1645, 1863, 2550 |
| Sau96I | GGNCC | 3 cut(s) | 388, 627, 777 |
| ScaI | AGTACT | 3 cut(s) | 811, 1216, 1819 |
| SchI | GAGTC | 5 cut(s) | 262, 299, 1285, 1754, 2706 |
| ScrFI | CCNGG | 3 cut(s) | 963, 1089, 1435 |
| SduI | GDGCHC | 3 cut(s) | 1327, 2157, 2402 |
| SexAI | ACCWGGT | 1 cut(s) | 1433 |
| SfaNI | GCATC | 4 cut(s) | 271, 273, 556, 754 |
| SfcI | CTRYAG | 2 cut(s) | 500, 1821 |
| SinI | GGWCC | 2 cut(s) | 388, 777 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1194, 1226, 1320, 1809 |
| SmlI | CTYRAG | 5 cut(s) | 38, 754, 1982, 2150, 2357 |
| SmoI | CTYRAG | 5 cut(s) | 38, 754, 1982, 2150, 2357 |
| SsiI | CCGC | 3 cut(s) | 796, 949, 1549 |
| SspMI | CTAG | 3 cut(s) | 290, 845, 1832 |
| SstI | GAGCTC | 1 cut(s) | 2157 |
| StyD4I | CCNGG | 3 cut(s) | 961, 1087, 1433 |
| StyI | CCWWGG | 4 cut(s) | 1038, 1192, 1773, 2047 |
| TaaI | ACNGT | 7 cut(s) | 1032, 1107, 1624, 1651, 1817, 1822, 2418 |
| TaiI | ACGT | 5 cut(s) | 870, 886, 1001, 1260, 2662 |
| TaqI | TCGA | 5 cut(s) | 576, 1058, 1788, 2083, 2309 |
| TatI | WGTACW | 3 cut(s) | 809, 1214, 1817 |
| TauI | GCSGC | 1 cut(s) | 952 |
| TfiI | GAWTC | 9 cut(s) | 107, 341, 490, 841, 1631, 1720, 2085, 2095, 2283 |
| Tru1I | TTAA | 8 cut(s) | 182, 536, 681, 783, 1119, 1260, 1557, 1953 |
| Tru9I | TTAA | 8 cut(s) | 182, 536, 681, 783, 1119, 1260, 1557, 1953 |
| TscAI | CASTG | 2 cut(s) | 2293, 2421 |
| TseI | GCWGC | 5 cut(s) | 502, 946, 1644, 1862, 2549 |
| TspGWI | ACGGA | 3 cut(s) | 263, 1575, 1700 |
| TspRI | CASTG | 2 cut(s) | 2293, 2421 |
| VpaK11BI | GGWCC | 2 cut(s) | 388, 777 |
| XapI | RAATTY | 7 cut(s) | 1736, 1827, 1889, 1977, 1988, 2009, 2620 |
| XbaI | TCTAGA | 1 cut(s) | 844 |
| XceI | RCATGY | 1 cut(s) | 1927 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1584 |
| XmiI | GTMKAC | 1 cut(s) | 1836 |
| XmnI | GAANNNNTTC | 4 cut(s) | 216, 1977, 1992, 2168 |
| XspI | CTAG | 3 cut(s) | 290, 845, 1832 |
| ZrmI | AGTACT | 3 cut(s) | 811, 1216, 1819 |