Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0002546

Physical Location & Seq

Genomic Coordinates Reverse (-)

24848775 .. 24869125

Gene Structure 20351 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG238600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGTCGATAAACAGAGATAGCTTCCGTTTCCATTCTTCCGAGTCCATGGACAGCAATTTATACTTGCAGCCTGATAACCCATTTCAACTTCCAAGTTCCATAAGAGATGCGCCACATGACTGTAATTTTACTGTTGCTAACTATCCAGTTCCACCACCATTGCCTTTGGGAGGTTATGAGGGTTTTATAACTGGGGCAAACAACAGCACTTCTGGAGGGAAACAAACTAGCCACAATTTACTCAACAACGAGACCAGTGCTAGTGGAGGTGGAACAAATTCTGCGGCTACCAAACATAGACGATCCCAAAGAAAAGGCAAATCATTTGGTAACAGTAGCTCCATGTATCGAGGTGTTACAAAGTACGAAAATGGACGATGTGAAGCATTTATATGGGATAACACGGATCCAGAAGAGAAATCCAAGACAAGTGGATTTGAAGTAGAAGAGGATGCAGCTAGAGCTCATGACCTAGCTGCTCTAAAATTATGGGGAGAGTCTGCGAGTTTGAATTTTCCGTTAAGCAACTACGTGAATGACCTGGAAGAAATGAAGTCATTTACGAAGAAGGAATACCTTCTACACATCAGAAGAAGCAAGACGGGTTTAGCCAAGACGGTATCCAATTACCGTGGAGTTTCGAGGAACGCGCACAACAAAAAATGGCAAGTTAGGTTAGGAAAAGGAAAAGACATTGATAGCATTTATGTTGGAACATTTGATACCGAAGAGCAAGCCGGCGAAGCATATGACGTTGCAGCTATAAGGGTGAAAGGGCCGAAAGCAATCACCAATTTTGATAAAAGTAACTACGATGTCAAACAGATTCTTGAAAGCCCAAAATTTCTAATTGATAAAGGTGCATCGAAGACGTTGAAGCGAAGTTCAGTTGATGATGTGCTTCAAAAGAGAAGAAAGACTCGCAGTGACTCCAGCTCAACCCCTAGTGCCCCACCATCACTTCACCTAATAGATCAAACTCAACCAACGGTAATCGATTCAAGCCTTCAATATCAATTTCCGATCCCTTACCTCCAAGTTCCAGTCCCTCACGGTTACCAAAACCCTATCTTTGAAGCAAACCGAAGTTTCAGTCCTCAGTATGACTATGGTGGAAGTGAGCCAATAGCCCAGCTTCAACCTATCATACCCTTATTGAATCAAGAGTTTCCATCTCATCAGTATTGTAACAGCAATTCCCAGCACCACCTTGATCAAACCCCTAGCTCCCAGTTCCTTCAAGACACTCAGAACCCTAATCTTGTTGCTGGGTTGAACAACCTTGCAAGTGATAGCTGTATGGAAGAATTTTCCAGCAGTCAGGTTCATGAGGCGAGTTTCGAGATGATGGGGACGAACGAGGGTGGCGCTCATGGTGATGGTAGCAGTCATGTAGTTGGAAATCTTGGTGATCCTGTGTTTGGGATGGGCAATTCTGACTTGGATCCTGCGAGCTGGCTAGAAACGTTCTTGAGGATGAGCCCACAACGTCTTGATTCCATGGTTGATTATAGCAATCGCAATTTACTGGCTATTGCAGCTGGTATTAAGCAGAAACATAGTGTTGATGATATTGTGCAAAAGTTTCTTCCAGAAAACTTTACGATTATACTATTCCATTATGATGGGAATGTTAAAGGGTGGTGGGATCTTGAGTGGAGTAATCAGGCCATACACATAGTTGCCCACAACCAAACAAAGTGGTGGTTTGCAAAACGATTTCCACATCCAGATGTTGTGTCCATTTATGATTACATATTCCTTTGGGATGAAGATTTGGGGGTTGAGGATTTTAACCCCCAGCAAGGTACCTTGAAATTAATTACAGTTTGTGCTGAAAAAAAGAAGTTCCATAGAAGAGTTTATGATAGTAGAGACAGTGTGAAGTGTACGGAGGAAAGTCGAGGACCACCATGCACTAGGTTTGTGGAAGGTATGGCTCCGGTCTTTTCAAGATCTGCCTGGTATTGTACTTGGCATCTTATACAGATTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF707

Protein Analysis

665

Amino Acids

74.66

Weight (kDa)

6.13

Isoelectric Point (pI)

52.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	208 - 259	7.2e-08	AP2 domain
DUF707	PF05212	503 - 602	5.1e-48	Protein of unknown function (DUF707)
DUF707	PF05212	608 - 663	7.4e-18	Protein of unknown function (DUF707)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002546)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g23031
malus_domestica	MD17G1047700.v1.1
prunus_persica	Prupe.7G069100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0480851 RchiOBHm_Chr3g0480891
rosa_laevigata	RLG00000023444 RLG00000023445 RLG00000023447 RLG00000034573
rosa_multiflora	Rmu_sc0004058.1_g000024 Rmu_sc0004838.1_g000011 Rmu_sc0006028.1_g000028 Rmu_sc0012984.1_g000002 Rmu_sc0012984.1_g000013
rosa_roxburghii	Rroxscaffold_1G00032960 Rroxscaffold_6G00400920 Rroxscaffold_6G00400960
rosa_rugosa	Rorug03G0186900 Rorug03G0187000 Rorug03G0187000 Rorug03G0187200 Rorug03G0187300 Rorug05G0241400
rosa_samantha	Rh3AG238500 Rh3AG238600 Rh3BG272000 Rh3BG272500 Rh3BG272700 Rh3BG272800 Rh3CG267800 Rh3CG268300 Rh3DG264100 Rh3DG264400 Rh5AG321600 Rh5BG331900 Rh5CG357200 Rh5DG343700
rosa_wichuraiana	Rw0G006160 Rw3G021350 Rw3G021360 Rw5G030350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	188
Acc65I	GGTACC	1 cut(s)	1808
AccB1I	GGYRCC	1 cut(s)	1808
AccII	CGCG	1 cut(s)	650
AciI	CCGC	1 cut(s)	284
AclI	AACGTT	1 cut(s)	1466
AclWI	GGATC	8 cut(s)	297, 401, 414, 1018, 1406, 1439, 1452, 1656
AcsI	RAATTY	4 cut(s)	277, 511, 842, 1307
AfaI	GTAC	4 cut(s)	365, 1810, 1891, 1972
AfiI	CCNNNNNNNGG	3 cut(s)	170, 1421, 1805
AjnI	CCWGG	2 cut(s)	540, 1961
Alw21I	GWGCWC	1 cut(s)	466
Alw26I	GTCTC	2 cut(s)	245, 1869
AlwI	GGATC	8 cut(s)	297, 401, 414, 1018, 1406, 1439, 1452, 1656
AoxI	GGCC	2 cut(s)	776, 1668
ApeKI	GCWGC	5 cut(s)	67, 455, 476, 758, 1538
ApoI	RAATTY	4 cut(s)	277, 511, 842, 1307
ArsI	GACNNNNNNTTYG	2 cut(s)	1078, 1110
AseI	ATTAAT	1 cut(s)	1820
Asp700I	GAANNNNTTC	2 cut(s)	277, 576
Asp718I	GGTACC	1 cut(s)	1808
AspLEI	GCGC	3 cut(s)	112, 652, 1370
AspS9I	GGNCC	2 cut(s)	776, 1907
AsuHPI	GGTGA	5 cut(s)	781, 781, 956, 1388, 1421
AvaII	GGWCC	1 cut(s)	1907
BaeGI	GKGCMC	1 cut(s)	952
BamHI	GGATCC	2 cut(s)	406, 1444
BanI	GGYRCC	1 cut(s)	1808
BanII	GRGCYC	2 cut(s)	466, 1484
BarI	GAAGNNNNNNTAC	2 cut(s)	557, 589
BbsI	GAAGAC	1 cut(s)	875
Bbv12I	GWGCWC	1 cut(s)	466
BbvI	GCAGC	5 cut(s)	79, 463, 467, 770, 1550
BccI	CCATC	6 cut(s)	964, 1180, 1342, 1373, 1420, 1619
BcgI	CGANNNNNNTGC	2 cut(s)	239, 273
BciT130I	CCWGG	2 cut(s)	542, 1963
BciVI	GTATCC	1 cut(s)	631
BclI	TGATCA	1 cut(s)	1213
BcoDI	GTCTC	2 cut(s)	245, 1869
BfaI	CTAG	8 cut(s)	228, 261, 459, 473, 945, 1224, 1460, 1920
BfoI	RGCGCY	1 cut(s)	1371
BfuI	GTATCC	1 cut(s)	631
BglII	AGATCT	1 cut(s)	1955
BisI	GCNGC	6 cut(s)	68, 285, 456, 477, 759, 1539
BlsI	GCNGC	6 cut(s)	69, 286, 457, 478, 760, 1540
Bme1390I	CCNGG	2 cut(s)	542, 1963
Bme18I	GGWCC	1 cut(s)	1907
BmgT120I	GGNCC	2 cut(s)	776, 1907
BmiI	GGNNCC	4 cut(s)	408, 1446, 1810, 1941
BmrFI	CCNGG	2 cut(s)	542, 1963
BmrI	ACTGGG	2 cut(s)	201, 1225
BmsI	GCATC	4 cut(s)	97, 442, 872, 1987
BmuI	ACTGGG	2 cut(s)	201, 1225
BpiI	GAAGAC	1 cut(s)	875
BpmI	CTGGAG	2 cut(s)	234, 916
BpuEI	CTTGAG	2 cut(s)	1492, 1673
Bsa29I	ATCGAT	1 cut(s)	996
BsaAI	YACGTR	1 cut(s)	532
BsaI	GGTCTC	1 cut(s)	245
BsaJI	CCNNGG	3 cut(s)	45, 631, 1500
BsaWI	WCCGGW	1 cut(s)	1942
BsaXI	ACNNNNNCTCC	2 cut(s)	323, 353
Bsc4I	CCNNNNNNNGG	3 cut(s)	170, 1421, 1805
Bse118I	RCCGGY	1 cut(s)	737
Bse1I	ACTGG	6 cut(s)	146, 196, 255, 1043, 1231, 1533
Bse3DI	GCAATG	1 cut(s)	158
BseBI	CCWGG	2 cut(s)	542, 1963
BseCI	ATCGAT	1 cut(s)	996
BseDI	CCNNGG	3 cut(s)	45, 631, 1500
BseGI	GGATG	5 cut(s)	457, 1431, 1482, 1726, 1774
BseLI	CCNNNNNNNGG	3 cut(s)	170, 1421, 1805
BseMI	GCAATG	1 cut(s)	158
BseMII	CTCAG	2 cut(s)	1112, 1262
BseNI	ACTGG	6 cut(s)	146, 196, 255, 1043, 1231, 1533
BseSI	GKGCMC	1 cut(s)	952
BseXI	GCAGC	5 cut(s)	79, 463, 467, 770, 1550
BseYI	CCCAGC	4 cut(s)	1131, 1200, 1268, 1800
Bsh1236I	CGCG	1 cut(s)	650
BshFI	GGCC	2 cut(s)	778, 1670
BshNI	GGYRCC	1 cut(s)	1808
BshVI	ATCGAT	1 cut(s)	996
BsiHKAI	GWGCWC	1 cut(s)	466
BsiSI	CCGG	2 cut(s)	738, 1943
BslFI	GGGAC	2 cut(s)	1031, 1366
BslI	CCNNNNNNNGG	3 cut(s)	170, 1421, 1805
BsmAI	GTCTC	2 cut(s)	245, 1869
BsmFI	GGGAC	2 cut(s)	1031, 1366
BsnI	GGCC	2 cut(s)	778, 1670
Bso31I	GGTCTC	1 cut(s)	245
Bsp1286I	GDGCHC	3 cut(s)	466, 952, 1484
Bsp143I	GATC	9 cut(s)	302, 406, 973, 1023, 1213, 1411, 1444, 1648, 1955
Bsp19I	CCATGG	2 cut(s)	45, 1500
BspACI	CCGC	1 cut(s)	284
BspANI	GGCC	2 cut(s)	778, 1670
BspCNI	CTCAG	2 cut(s)	1111, 1261
BspDI	ATCGAT	1 cut(s)	996
BspFNI	CGCG	1 cut(s)	650
BspHI	TCATGA	2 cut(s)	466, 1327
BspLI	GGNNCC	4 cut(s)	408, 1446, 1810, 1941
BspPI	GGATC	8 cut(s)	297, 401, 414, 1018, 1406, 1439, 1452, 1656
BspQI	GCTCTTC	1 cut(s)	723
BspT107I	GGYRCC	1 cut(s)	1808
BspTNI	GGTCTC	1 cut(s)	245
BsrDI	GCAATG	1 cut(s)	158
BsrFI	RCCGGY	1 cut(s)	737
BsrI	ACTGG	6 cut(s)	146, 196, 255, 1043, 1231, 1533
BssAI	RCCGGY	1 cut(s)	737
BssECI	CCNNGG	3 cut(s)	45, 631, 1500
BssMI	GATC	9 cut(s)	302, 406, 973, 1023, 1213, 1411, 1444, 1648, 1955
BssT1I	CCWWGG	2 cut(s)	45, 1500
Bst2UI	CCWGG	2 cut(s)	542, 1963
Bst4CI	ACNGT	9 cut(s)	122, 133, 335, 619, 632, 991, 1055, 1828, 1880
Bst6I	CTCTTC	4 cut(s)	408, 441, 723, 1852
BstBAI	YACGTR	1 cut(s)	532
BstC8I	GCNNGC	4 cut(s)	735, 739, 1453, 1457
BstDEI	CTNAG	2 cut(s)	1098, 1248
BstDSI	CCRYGG	3 cut(s)	45, 631, 1500
BstEII	GGTNACC	1 cut(s)	1055
BstENI	CCTNNNNNAGG	1 cut(s)	168
BstF5I	GGATG	5 cut(s)	457, 1431, 1482, 1726, 1774
BstFNI	CGCG	1 cut(s)	650
BstH2I	RGCGCY	1 cut(s)	1371
BstHHI	GCGC	3 cut(s)	112, 652, 1370
BstKTI	GATC	9 cut(s)	305, 409, 976, 1026, 1216, 1414, 1447, 1651, 1958
BstMAI	GTCTC	2 cut(s)	245, 1869
BstMBI	GATC	9 cut(s)	302, 406, 973, 1023, 1213, 1411, 1444, 1648, 1955
BstMWI	GCNNNNNNNGC	3 cut(s)	461, 743, 1538
BstNI	CCWGG	2 cut(s)	542, 1963
BstPI	GGTNACC	1 cut(s)	1055
BstSCI	CCNGG	2 cut(s)	540, 1961
BstSLI	GKGCMC	1 cut(s)	952
BstUI	CGCG	1 cut(s)	650
BstV1I	GCAGC	5 cut(s)	79, 463, 467, 770, 1550
BstV2I	GAAGAC	1 cut(s)	875
BstX2I	RGATCY	4 cut(s)	406, 1444, 1648, 1955
BstXI	CCANNNNNNTGG	1 cut(s)	1625
BstYI	RGATCY	4 cut(s)	406, 1444, 1648, 1955
Bsu15I	ATCGAT	1 cut(s)	996
BsuI	GTATCC	1 cut(s)	631
BsuRI	GGCC	2 cut(s)	778, 1670
BsuTUI	ATCGAT	1 cut(s)	996
BtgI	CCRYGG	3 cut(s)	45, 631, 1500
BtsCI	GGATG	5 cut(s)	457, 1431, 1482, 1726, 1774
BtsI	GCAGTG	1 cut(s)	931
BtsIMutI	CAGTG	3 cut(s)	262, 931, 1885
Cac8I	GCNNGC	4 cut(s)	735, 739, 1453, 1457
CciI	TCATGA	2 cut(s)	466, 1327
CfoI	GCGC	3 cut(s)	112, 652, 1370
Cfr10I	RCCGGY	1 cut(s)	737
Cfr13I	GGNCC	2 cut(s)	776, 1907
ClaI	ATCGAT	1 cut(s)	996
Csp6I	GTAC	4 cut(s)	364, 1809, 1890, 1971
CspCI	CAANNNNNGTGG	8 cut(s)	141, 176, 412, 447, 613, 648, 1682, 1717
CviQI	GTAC	4 cut(s)	364, 1809, 1890, 1971
DdeI	CTNAG	2 cut(s)	1098, 1248
DpnI	GATC	9 cut(s)	304, 408, 975, 1025, 1215, 1413, 1446, 1650, 1957
DpnII	GATC	9 cut(s)	302, 406, 973, 1023, 1213, 1411, 1444, 1648, 1955
Eam1104I	CTCTTC	4 cut(s)	408, 441, 723, 1852
EarI	CTCTTC	4 cut(s)	408, 441, 723, 1852
Ecl136II	GAGCTC	1 cut(s)	464
Eco130I	CCWWGG	2 cut(s)	45, 1500
Eco24I	GRGCYC	2 cut(s)	466, 1484
Eco31I	GGTCTC	1 cut(s)	245
Eco47I	GGWCC	1 cut(s)	1907
Eco53kI	GAGCTC	1 cut(s)	464
Eco91I	GGTNACC	1 cut(s)	1055
EcoICRI	GAGCTC	1 cut(s)	464
EcoNI	CCTNNNNNAGG	1 cut(s)	168
EcoO65I	GGTNACC	1 cut(s)	1055
EcoRII	CCWGG	2 cut(s)	540, 1961
EcoT14I	CCWWGG	2 cut(s)	45, 1500
EcoT38I	GRGCYC	2 cut(s)	466, 1484
ErhI	CCWWGG	2 cut(s)	45, 1500
FaqI	GGGAC	2 cut(s)	1031, 1366
FauNDI	CATATG	1 cut(s)	748
FbaI	TGATCA	1 cut(s)	1213
Fnu4HI	GCNGC	6 cut(s)	68, 285, 456, 477, 759, 1539
FokI	GGATG	5 cut(s)	464, 1438, 1489, 1713, 1781
FriOI	GRGCYC	2 cut(s)	466, 1484
Fsp4HI	GCNGC	6 cut(s)	68, 285, 456, 477, 759, 1539
FspBI	CTAG	8 cut(s)	228, 261, 459, 473, 945, 1224, 1460, 1920
GlaI	GCGC	3 cut(s)	111, 651, 1369
GluI	GCNGC	6 cut(s)	68, 285, 456, 477, 759, 1539
GsaI	CCCAGC	4 cut(s)	1135, 1204, 1272, 1804
GsuI	CTGGAG	2 cut(s)	234, 916
HaeII	RGCGCY	1 cut(s)	1371
HaeIII	GGCC	2 cut(s)	778, 1670
HapII	CCGG	2 cut(s)	738, 1943
HhaI	GCGC	3 cut(s)	112, 652, 1370
Hin6I	GCGC	3 cut(s)	110, 650, 1368
HinP1I	GCGC	3 cut(s)	110, 650, 1368
HinfI	GANTC	8 cut(s)	41, 497, 826, 919, 929, 998, 1159, 1496
HpaII	CCGG	2 cut(s)	738, 1943
HphI	GGTGA	5 cut(s)	781, 781, 956, 1388, 1421
Hpy166II	GTNNAC	1 cut(s)	1890
Hpy188I	TCNGA	5 cut(s)	40, 590, 1023, 1251, 1438
Hpy8I	GTNNAC	1 cut(s)	1890
HpyAV	CCTTC	5 cut(s)	562, 587, 1016, 1247, 1925
HpyCH4III	ACNGT	9 cut(s)	122, 133, 335, 619, 632, 991, 1055, 1828, 1880
HpyCH4IV	ACGT	5 cut(s)	531, 753, 872, 1466, 1489
HpyF10VI	GCNNNNNNNGC	3 cut(s)	461, 743, 1538
HpyF3I	CTNAG	2 cut(s)	1098, 1248
HpySE526I	ACGT	5 cut(s)	531, 753, 872, 1466, 1489
HspAI	GCGC	3 cut(s)	110, 650, 1368
KpnI	GGTACC	1 cut(s)	1812
KroI	GCCGGC	1 cut(s)	737
KroNI	GCCGGC	1 cut(s)	739
Ksp22I	TGATCA	1 cut(s)	1213
Kzo9I	GATC	9 cut(s)	302, 406, 973, 1023, 1213, 1411, 1444, 1648, 1955
LguI	GCTCTTC	1 cut(s)	723
LmnI	GCTCC	3 cut(s)	344, 1232, 1945
Lsp1109I	GCAGC	5 cut(s)	79, 463, 467, 770, 1550
LweI	GCATC	4 cut(s)	97, 442, 872, 1987
MaeI	CTAG	8 cut(s)	228, 261, 459, 473, 945, 1224, 1460, 1920
MaeII	ACGT	5 cut(s)	531, 753, 872, 1466, 1489
MaeIII	GTNAC	6 cut(s)	329, 355, 806, 926, 1055, 1187
MalI	GATC	9 cut(s)	304, 408, 975, 1025, 1215, 1413, 1446, 1650, 1957
MboI	GATC	9 cut(s)	302, 406, 973, 1023, 1213, 1411, 1444, 1648, 1955
MflI	RGATCY	4 cut(s)	406, 1444, 1648, 1955
MhlI	GDGCHC	3 cut(s)	466, 952, 1484
MlyI	GAGTC	4 cut(s)	50, 506, 913, 923
MmeI	TCCRAC	2 cut(s)	691, 1378
MroNI	GCCGGC	1 cut(s)	737
MroXI	GAANNNNTTC	2 cut(s)	277, 576
MseI	TTAA	5 cut(s)	521, 1548, 1635, 1794, 1820
MslI	CAYNNNNRTG	4 cut(s)	391, 1377, 1623, 1731
MspA1I	CMGCKG	1 cut(s)	1541
MspI	CCGG	2 cut(s)	738, 1943
MspR9I	CCNGG	2 cut(s)	542, 1963
MvaI	CCWGG	2 cut(s)	542, 1963
MvnI	CGCG	1 cut(s)	650
MwoI	GCNNNNNNNGC	3 cut(s)	461, 743, 1538
NaeI	GCCGGC	1 cut(s)	739
NcoI	CCATGG	2 cut(s)	45, 1500
NdeI	CATATG	1 cut(s)	748
NdeII	GATC	9 cut(s)	302, 406, 973, 1023, 1213, 1411, 1444, 1648, 1955
NgoMIV	GCCGGC	1 cut(s)	737
NlaIV	GGNNCC	4 cut(s)	408, 1446, 1810, 1941
NmuCI	GTSAC	1 cut(s)	926
PagI	TCATGA	2 cut(s)	466, 1327
PciSI	GCTCTTC	1 cut(s)	723
PdiI	GCCGGC	1 cut(s)	739
PdmI	GAANNNNTTC	2 cut(s)	277, 576
PfeI	GAWTC	4 cut(s)	826, 998, 1159, 1496
PkrI	GCNGC	6 cut(s)	69, 286, 457, 478, 760, 1540
PleI	GAGTC	4 cut(s)	49, 505, 913, 923
PpsI	GAGTC	4 cut(s)	49, 505, 913, 923
Ppu21I	YACGTR	1 cut(s)	532
PshBI	ATTAAT	1 cut(s)	1820
PsiI	TTATAA	1 cut(s)	188
Psp124BI	GAGCTC	1 cut(s)	466
Psp1406I	AACGTT	1 cut(s)	1466
Psp6I	CCWGG	2 cut(s)	540, 1961
PspEI	GGTNACC	1 cut(s)	1055
PspFI	CCCAGC	4 cut(s)	1131, 1200, 1268, 1800
PspGI	CCWGG	2 cut(s)	540, 1961
PspN4I	GGNNCC	4 cut(s)	408, 1446, 1810, 1941
PspPI	GGNCC	2 cut(s)	776, 1907
PsrI	GAACNNNNNNTAC	2 cut(s)	706, 738
PsuI	RGATCY	4 cut(s)	406, 1444, 1648, 1955
PvuII	CAGCTG	1 cut(s)	1541
RsaI	GTAC	4 cut(s)	365, 1810, 1891, 1972
RsaNI	GTAC	4 cut(s)	364, 1809, 1890, 1971
RseI	CAYNNNNRTG	4 cut(s)	391, 1377, 1623, 1731
SacI	GAGCTC	1 cut(s)	466
SapI	GCTCTTC	1 cut(s)	723
SaqAI	TTAA	5 cut(s)	521, 1548, 1635, 1794, 1820
SatI	GCNGC	6 cut(s)	68, 285, 456, 477, 759, 1539
Sau3AI	GATC	9 cut(s)	302, 406, 973, 1023, 1213, 1411, 1444, 1648, 1955
Sau96I	GGNCC	2 cut(s)	776, 1907
SchI	GAGTC	4 cut(s)	50, 506, 913, 923
ScrFI	CCNGG	2 cut(s)	542, 1963
SduI	GDGCHC	3 cut(s)	466, 952, 1484
SfaNI	GCATC	4 cut(s)	97, 442, 872, 1987
SinI	GGWCC	1 cut(s)	1907
SmiMI	CAYNNNNRTG	4 cut(s)	391, 1377, 1623, 1731
SmlI	CTYRAG	2 cut(s)	1471, 1652
SmoI	CTYRAG	2 cut(s)	1471, 1652
SsiI	CCGC	1 cut(s)	284
SspMI	CTAG	8 cut(s)	228, 261, 459, 473, 945, 1224, 1460, 1920
SstI	GAGCTC	1 cut(s)	466
StyD4I	CCNGG	2 cut(s)	540, 1961
StyI	CCWWGG	2 cut(s)	45, 1500
TaaI	ACNGT	9 cut(s)	122, 133, 335, 619, 632, 991, 1055, 1828, 1880
TaiI	ACGT	5 cut(s)	534, 756, 875, 1469, 1492
TaqI	TCGA	7 cut(s)	5, 349, 641, 866, 996, 1341, 1903
TatI	WGTACW	1 cut(s)	1970
TauI	GCSGC	1 cut(s)	287
TfiI	GAWTC	4 cut(s)	826, 998, 1159, 1496
Tru1I	TTAA	5 cut(s)	521, 1548, 1635, 1794, 1820
Tru9I	TTAA	5 cut(s)	521, 1548, 1635, 1794, 1820
TscAI	CASTG	3 cut(s)	262, 931, 1885
TseFI	GTSAC	1 cut(s)	926
TseI	GCWGC	5 cut(s)	67, 455, 476, 758, 1538
Tsp45I	GTSAC	1 cut(s)	926
TspDTI	ATGAA	3 cut(s)	566, 1316, 1785
TspGWI	ACGGA	4 cut(s)	14, 419, 507, 1907
TspRI	CASTG	3 cut(s)	262, 931, 1885
VpaK11BI	GGWCC	1 cut(s)	1907
VspI	ATTAAT	1 cut(s)	1820
XagI	CCTNNNNNAGG	1 cut(s)	168
XapI	RAATTY	4 cut(s)	277, 511, 842, 1307
XmnI	GAANNNNTTC	2 cut(s)	277, 576
XspI	CTAG	8 cut(s)	228, 261, 459, 473, 945, 1224, 1460, 1920

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.