Origin recognition complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g30421 |
| malus_domestica | MD05G1077600.v1.1 MD05G1078300.v1.1 MD05G1078500.v1.1 |
| rosa_chinensis | RchiOBHm_Chr3g0496491 RchiOBHm_Chr5g0052551 RchiOBHm_Chr6g0274301 |
| rosa_laevigata | RLG00000024686 |
| rosa_multiflora | Rmu_co8446175.1_g000001 Rmu_sc0003641.1_g000017 Rmu_sc0004230.1_g000016 |
| rosa_roxburghii | Rroxscaffold_1G00032360 Rroxscaffold_1G00038920 Rroxscaffold_4G00320760 Rroxscaffold_7G00201650 |
| rosa_rugosa | Rorug05G0348000 Rorug07G0144800 Rorug07G0144900 |
| rosa_samantha | Rh1AG009800 Rh1AG099800 Rh1AG100700 Rh1AG144900 Rh1CG204500 Rh1DG101900 Rh2AG517000 Rh2BG259000 Rh2DG439900 Rh3CG357900 Rh4CG191000 Rh4CG244300 Rh6AG274200 Rh6CG030900 Rh6CG098900 Rh6CG276500 Rh7AG405200 Rh7CG299500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 222 |
| AciI | CCGC | 1 cut(s) | 86 |
| AfaI | GTAC | 2 cut(s) | 97, 232 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 74 |
| AgsI | TTSAA | 1 cut(s) | 200 |
| AjiI | CACGTC | 1 cut(s) | 260 |
| AjnI | CCWGG | 1 cut(s) | 253 |
| AluBI | AGCT | 1 cut(s) | 72 |
| AluI | AGCT | 1 cut(s) | 72 |
| Alw21I | GWGCWC | 1 cut(s) | 74 |
| Alw26I | GTCTC | 1 cut(s) | 37 |
| AoxI | GGCC | 1 cut(s) | 65 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 249 |
| AsuHPI | GGTGA | 1 cut(s) | 197 |
| BanII | GRGCYC | 1 cut(s) | 74 |
| Bbv12I | GWGCWC | 1 cut(s) | 74 |
| BciT130I | CCWGG | 1 cut(s) | 255 |
| BcoDI | GTCTC | 1 cut(s) | 37 |
| Bme1390I | CCNGG | 1 cut(s) | 255 |
| BmgBI | CACGTC | 1 cut(s) | 260 |
| BmrFI | CCNGG | 1 cut(s) | 255 |
| BmrI | ACTGGG | 1 cut(s) | 140 |
| BmuI | ACTGGG | 1 cut(s) | 140 |
| BsaI | GGTCTC | 1 cut(s) | 37 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 74 |
| Bse1I | ACTGG | 1 cut(s) | 135 |
| Bse3DI | GCAATG | 2 cut(s) | 216, 244 |
| BseBI | CCWGG | 1 cut(s) | 255 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 74 |
| BseMI | GCAATG | 2 cut(s) | 216, 244 |
| BseNI | ACTGG | 1 cut(s) | 135 |
| BshFI | GGCC | 1 cut(s) | 67 |
| BsiHKAI | GWGCWC | 1 cut(s) | 74 |
| BsiWI | CGTACG | 1 cut(s) | 95 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 74 |
| BsmAI | GTCTC | 1 cut(s) | 37 |
| BsnI | GGCC | 1 cut(s) | 67 |
| Bso31I | GGTCTC | 1 cut(s) | 37 |
| Bsp1286I | GDGCHC | 1 cut(s) | 74 |
| Bsp1407I | TGTACA | 1 cut(s) | 230 |
| Bsp143I | GATC | 1 cut(s) | 59 |
| BspACI | CCGC | 1 cut(s) | 86 |
| BspANI | GGCC | 1 cut(s) | 67 |
| BspTNI | GGTCTC | 1 cut(s) | 37 |
| BsrDI | GCAATG | 2 cut(s) | 216, 244 |
| BsrGI | TGTACA | 1 cut(s) | 230 |
| BsrI | ACTGG | 1 cut(s) | 135 |
| BssMI | GATC | 1 cut(s) | 59 |
| Bst2UI | CCWGG | 1 cut(s) | 255 |
| BstAUI | TGTACA | 1 cut(s) | 230 |
| BstKTI | GATC | 1 cut(s) | 62 |
| BstMAI | GTCTC | 1 cut(s) | 37 |
| BstMBI | GATC | 1 cut(s) | 59 |
| BstNI | CCWGG | 1 cut(s) | 255 |
| BstSCI | CCNGG | 1 cut(s) | 253 |
| BsuRI | GGCC | 1 cut(s) | 67 |
| BtrI | CACGTC | 1 cut(s) | 260 |
| Csp6I | GTAC | 2 cut(s) | 96, 231 |
| CviJI | RGCY | 2 cut(s) | 67, 72 |
| CviKI_1 | RGCY | 2 cut(s) | 67, 72 |
| CviQI | GTAC | 2 cut(s) | 96, 231 |
| DpnI | GATC | 1 cut(s) | 61 |
| DpnII | GATC | 1 cut(s) | 59 |
| EciI | GGCGGA | 1 cut(s) | 75 |
| Ecl136II | GAGCTC | 1 cut(s) | 72 |
| Eco24I | GRGCYC | 1 cut(s) | 74 |
| Eco31I | GGTCTC | 1 cut(s) | 37 |
| Eco53kI | GAGCTC | 1 cut(s) | 72 |
| EcoICRI | GAGCTC | 1 cut(s) | 72 |
| EcoRII | CCWGG | 1 cut(s) | 253 |
| EcoT38I | GRGCYC | 1 cut(s) | 74 |
| FaiI | YATR | 4 cut(s) | 155, 162, 171, 222 |
| FriOI | GRGCYC | 1 cut(s) | 74 |
| HaeIII | GGCC | 1 cut(s) | 67 |
| HinfI | GANTC | 1 cut(s) | 82 |
| HphI | GGTGA | 1 cut(s) | 197 |
| Hpy166II | GTNNAC | 1 cut(s) | 231 |
| Hpy188III | TCNNGA | 1 cut(s) | 9 |
| Hpy8I | GTNNAC | 1 cut(s) | 231 |
| Hpy99I | CGWCG | 1 cut(s) | 52 |
| HpyAV | CCTTC | 1 cut(s) | 113 |
| HpyCH4IV | ACGT | 1 cut(s) | 259 |
| HpySE526I | ACGT | 1 cut(s) | 259 |
| Kzo9I | GATC | 1 cut(s) | 59 |
| LpnPI | CCDG | 5 cut(s) | 60, 116, 162, 240, 267 |
| MaeII | ACGT | 1 cut(s) | 259 |
| MalI | GATC | 1 cut(s) | 61 |
| MboI | GATC | 1 cut(s) | 59 |
| MboII | GAAGA | 1 cut(s) | 15 |
| MhlI | GDGCHC | 1 cut(s) | 74 |
| MlyI | GAGTC | 1 cut(s) | 76 |
| MroXI | GAANNNNTTC | 1 cut(s) | 249 |
| MseI | TTAA | 1 cut(s) | 272 |
| MspR9I | CCNGG | 1 cut(s) | 255 |
| MvaI | CCWGG | 1 cut(s) | 255 |
| NdeII | GATC | 1 cut(s) | 59 |
| NmeAIII | GCCGAG | 1 cut(s) | 93 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 47 |
| PdmI | GAANNNNTTC | 1 cut(s) | 249 |
| Pfl23II | CGTACG | 1 cut(s) | 95 |
| PfoI | TCCNGGA | 1 cut(s) | 253 |
| PleI | GAGTC | 1 cut(s) | 76 |
| PpsI | GAGTC | 1 cut(s) | 76 |
| PsiI | TTATAA | 1 cut(s) | 222 |
| Psp124BI | GAGCTC | 1 cut(s) | 74 |
| Psp6I | CCWGG | 1 cut(s) | 253 |
| PspGI | CCWGG | 1 cut(s) | 253 |
| PspLI | CGTACG | 1 cut(s) | 95 |
| RsaI | GTAC | 2 cut(s) | 97, 232 |
| RsaNI | GTAC | 2 cut(s) | 96, 231 |
| SacI | GAGCTC | 1 cut(s) | 74 |
| SaqAI | TTAA | 1 cut(s) | 272 |
| Sau3AI | GATC | 1 cut(s) | 59 |
| SchI | GAGTC | 1 cut(s) | 76 |
| ScrFI | CCNGG | 1 cut(s) | 255 |
| SduI | GDGCHC | 1 cut(s) | 74 |
| SetI | ASST | 2 cut(s) | 74, 262 |
| SsiI | CCGC | 1 cut(s) | 86 |
| SstI | GAGCTC | 1 cut(s) | 74 |
| StyD4I | CCNGG | 1 cut(s) | 253 |
| TaiI | ACGT | 1 cut(s) | 262 |
| TaqI | TCGA | 3 cut(s) | 10, 26, 80 |
| TaqII | GACCGA | 1 cut(s) | 61 |
| TatI | WGTACW | 1 cut(s) | 230 |
| Tru1I | TTAA | 1 cut(s) | 272 |
| Tru9I | TTAA | 1 cut(s) | 272 |
| TspDTI | ATGAA | 3 cut(s) | 21, 128, 177 |
| XmnI | GAANNNNTTC | 1 cut(s) | 249 |