Rh4AG157600

aldo-keto reductase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
40156606 .. 40173945
17340 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG157600.1

Sequence Viewer

Length: 273 bp
ATGAGGAGGATGAAGCTGGGGTCACAAGGTCTGGAGGTCTCGACTCAAGGACTGGGTTGCATGGGCATGTTAGTCTTTTATGGCCACCCGAAGCCCGAGCCAAACTTGATCAAATTCCTTCACCATGCCATCGACACTGGCGTTACCTTCCTTGATACTGCTGATGTTTACTGTCCCTTCACCAACAAACTCTTCTGGGCAAGATCCAACTCAACCACTCCCAAGTATCAACAGAATCATCCAATCCAAGAGAGAACAAAGAGTTGCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

90

Amino Acids

10.24

Weight (kDa)

9.37

Isoelectric Point (pI)

33.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 198
AcoI YGGCCR 1 cut(s) 82
AcsI RAATTY 1 cut(s) 113
AjuI GAANNNNNNNTTGG 2 cut(s) 176, 208
AluBI AGCT 1 cut(s) 16
AluI AGCT 1 cut(s) 16
Alw26I GTCTC 1 cut(s) 43
AlwI GGATC 1 cut(s) 198
Ama87I CYCGRG 1 cut(s) 95
AoxI GGCC 1 cut(s) 82
ApoI RAATTY 1 cut(s) 113
AsuHPI GGTGA 2 cut(s) 113, 172
AvaI CYCGRG 1 cut(s) 95
BalI TGGCCA 1 cut(s) 84
BccI CCATC 1 cut(s) 137
BclI TGATCA 1 cut(s) 108
BcoDI GTCTC 1 cut(s) 43
BmeT110I CYCGRG 1 cut(s) 95
BmrI ACTGGG 1 cut(s) 62
BmuI ACTGGG 1 cut(s) 62
BpmI CTGGAG 1 cut(s) 53
BpuEI CTTGAG 1 cut(s) 30
BsaI GGTCTC 1 cut(s) 43
Bse1I ACTGG 2 cut(s) 57, 142
BseGI GGATG 2 cut(s) 15, 238
BseNI ACTGG 2 cut(s) 57, 142
BseRI GAGGAG 1 cut(s) 19
BseYI CCCAGC 1 cut(s) 16
BshFI GGCC 1 cut(s) 84
BsiHKCI CYCGRG 1 cut(s) 95
BslFI GGGAC 1 cut(s) 159
BsmAI GTCTC 1 cut(s) 43
BsmFI GGGAC 1 cut(s) 159
BsnI GGCC 1 cut(s) 84
Bso31I GGTCTC 1 cut(s) 43
BsoBI CYCGRG 1 cut(s) 95
Bsp143I GATC 2 cut(s) 108, 203
BspANI GGCC 1 cut(s) 84
BspPI GGATC 1 cut(s) 198
BspTNI GGTCTC 1 cut(s) 43
BsrI ACTGG 2 cut(s) 57, 142
BssMI GATC 2 cut(s) 108, 203
Bst4CI ACNGT 1 cut(s) 173
Bst6I CTCTTC 1 cut(s) 197
BstF5I GGATG 2 cut(s) 15, 238
BstKTI GATC 2 cut(s) 111, 206
BstMAI GTCTC 1 cut(s) 43
BstMBI GATC 2 cut(s) 108, 203
BstNSI RCATGY 1 cut(s) 70
BstX2I RGATCY 1 cut(s) 203
BstYI RGATCY 1 cut(s) 203
BsuRI GGCC 1 cut(s) 84
BtsCI GGATG 2 cut(s) 15, 238
BtsIMutI CAGTG 1 cut(s) 135
CviAII CATG 3 cut(s) 61, 67, 125
CviJI RGCY 4 cut(s) 16, 84, 94, 100
CviKI_1 RGCY 4 cut(s) 16, 84, 94, 100
DpnI GATC 2 cut(s) 110, 205
DpnII GATC 2 cut(s) 108, 203
EaeI YGGCCR 1 cut(s) 82
Eam1104I CTCTTC 1 cut(s) 197
EarI CTCTTC 1 cut(s) 197
Eco31I GGTCTC 1 cut(s) 43
Eco88I CYCGRG 1 cut(s) 95
FaeI CATG 3 cut(s) 64, 70, 128
FaiI YATR 4 cut(s) 62, 68, 81, 126
FaqI GGGAC 1 cut(s) 159
FatI CATG 3 cut(s) 60, 66, 124
FbaI TGATCA 1 cut(s) 108
FokI GGATG 2 cut(s) 22, 225
GsaI CCCAGC 1 cut(s) 20
GsuI CTGGAG 1 cut(s) 53
HaeIII GGCC 1 cut(s) 84
Hin1II CATG 3 cut(s) 64, 70, 128
HinfI GANTC 2 cut(s) 43, 235
HphI GGTGA 2 cut(s) 113, 172
Hpy166II GTNNAC 1 cut(s) 169
Hpy188III TCNNGA 2 cut(s) 32, 40
Hpy8I GTNNAC 1 cut(s) 169
HpyAV CCTTC 3 cut(s) 128, 157, 187
HpyCH4III ACNGT 1 cut(s) 173
HpyCH4V TGCA 2 cut(s) 60, 267
Hsp92II CATG 3 cut(s) 64, 70, 128
Ksp22I TGATCA 1 cut(s) 108
Kzo9I GATC 2 cut(s) 108, 203
LpnPI CCDG 5 cut(s) 2, 17, 38, 123, 181
MaeIII GTNAC 2 cut(s) 21, 142
MalI GATC 2 cut(s) 110, 205
MboI GATC 2 cut(s) 108, 203
MboII GAAGA 1 cut(s) 184
MflI RGATCY 1 cut(s) 203
MlsI TGGCCA 1 cut(s) 84
MluCI AATT 1 cut(s) 113
MluNI TGGCCA 1 cut(s) 84
MlyI GAGTC 1 cut(s) 37
MmeI TCCRAC 1 cut(s) 231
MnlI CCTC 1 cut(s) 28
Mox20I TGGCCA 1 cut(s) 84
MscI TGGCCA 1 cut(s) 84
MslI CAYNNNNRTG 1 cut(s) 65
Msp20I TGGCCA 1 cut(s) 84
NdeII GATC 2 cut(s) 108, 203
NlaIII CATG 3 cut(s) 64, 70, 128
NmuCI GTSAC 1 cut(s) 21
NspI RCATGY 1 cut(s) 70
PcsI WCGNNNNNNNCGW 1 cut(s) 138
PfeI GAWTC 1 cut(s) 235
PleI GAGTC 1 cut(s) 37
PpsI GAGTC 1 cut(s) 37
PspFI CCCAGC 1 cut(s) 16
PsuI RGATCY 1 cut(s) 203
RseI CAYNNNNRTG 1 cut(s) 65
Sau3AI GATC 2 cut(s) 108, 203
SchI GAGTC 1 cut(s) 37
SetI ASST 4 cut(s) 18, 31, 39, 149
SmiMI CAYNNNNRTG 1 cut(s) 65
SmlI CTYRAG 1 cut(s) 45
SmoI CTYRAG 1 cut(s) 45
Sse9I AATT 1 cut(s) 113
TaaI ACNGT 1 cut(s) 173
TaqI TCGA 2 cut(s) 41, 132
TasI AATT 1 cut(s) 113
TfiI GAWTC 1 cut(s) 235
TscAI CASTG 1 cut(s) 142
TseFI GTSAC 1 cut(s) 21
Tsp45I GTSAC 1 cut(s) 21
TspDTI ATGAA 1 cut(s) 26
TspRI CASTG 1 cut(s) 142
XapI RAATTY 1 cut(s) 113
XceI RCATGY 1 cut(s) 70
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.