Rh4BG157300

reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0003527
Physical Location & Seq
Forward (+)
28359773 .. 28359976
204 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG157300.1

Sequence Viewer

Length: 204 bp
ATGAGGAGGATGAAGCTGGGGTCACACGGCCTGGAGGTCTCGACTCAAGGATTGGGTTGCATGAGCATGTCCGTCTTTTATGGCCCCCCGAAGCCCGAGCCAAACTTGATCAAATTCCTCCACCACGCCATCGACACCGGCGTTACCTTCCTTGATACCACTGATGTTTACGGTCCCTTCACCAACGAACTTCTTCTGGGCAAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

68

Amino Acids

7.5

Weight (kDa)

6.81

Isoelectric Point (pI)

32.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 113
AjnI CCWGG 1 cut(s) 30
AluBI AGCT 1 cut(s) 16
AluI AGCT 1 cut(s) 16
Alw26I GTCTC 1 cut(s) 43
Ama87I CYCGRG 1 cut(s) 95
AoxI GGCC 2 cut(s) 28, 82
ApoI RAATTY 1 cut(s) 113
Asp700I GAANNNNTTC 1 cut(s) 192
AspS9I GGNCC 2 cut(s) 83, 173
AsuHPI GGTGA 1 cut(s) 172
AvaI CYCGRG 1 cut(s) 95
AvaII GGWCC 1 cut(s) 173
BccI CCATC 1 cut(s) 137
BceAI ACGGC 1 cut(s) 43
BciT130I CCWGG 1 cut(s) 32
BclI TGATCA 1 cut(s) 108
BcoDI GTCTC 1 cut(s) 43
Bme1390I CCNGG 1 cut(s) 32
Bme18I GGWCC 1 cut(s) 173
BmeT110I CYCGRG 1 cut(s) 95
BmgT120I GGNCC 2 cut(s) 83, 173
BmiI GGNNCC 2 cut(s) 85, 175
BmrFI CCNGG 1 cut(s) 32
BpmI CTGGAG 1 cut(s) 53
BpuEI CTTGAG 1 cut(s) 30
BsaI GGTCTC 1 cut(s) 43
Bse118I RCCGGY 1 cut(s) 137
BseBI CCWGG 1 cut(s) 32
BseGI GGATG 1 cut(s) 15
BseRI GAGGAG 1 cut(s) 19
BseYI CCCAGC 1 cut(s) 16
BshFI GGCC 2 cut(s) 30, 84
BsiHKCI CYCGRG 1 cut(s) 95
BsiSI CCGG 1 cut(s) 138
BslFI GGGAC 1 cut(s) 159
BsmAI GTCTC 1 cut(s) 43
BsmFI GGGAC 1 cut(s) 159
BsnI GGCC 2 cut(s) 30, 84
Bso31I GGTCTC 1 cut(s) 43
BsoBI CYCGRG 1 cut(s) 95
Bsp143I GATC 1 cut(s) 108
BspANI GGCC 2 cut(s) 30, 84
BspLI GGNNCC 2 cut(s) 85, 175
BspTNI GGTCTC 1 cut(s) 43
BsrFI RCCGGY 1 cut(s) 137
BssAI RCCGGY 1 cut(s) 137
BssMI GATC 1 cut(s) 108
Bst2UI CCWGG 1 cut(s) 32
Bst4CI ACNGT 1 cut(s) 173
BstF5I GGATG 1 cut(s) 15
BstKTI GATC 1 cut(s) 111
BstMAI GTCTC 1 cut(s) 43
BstMBI GATC 1 cut(s) 108
BstNI CCWGG 1 cut(s) 32
BstNSI RCATGY 1 cut(s) 70
BstSCI CCNGG 1 cut(s) 30
BsuRI GGCC 2 cut(s) 30, 84
BtsCI GGATG 1 cut(s) 15
BtsIMutI CAGTG 1 cut(s) 159
Cfr10I RCCGGY 1 cut(s) 137
Cfr13I GGNCC 2 cut(s) 83, 173
CviAII CATG 2 cut(s) 61, 67
CviJI RGCY 5 cut(s) 16, 30, 84, 94, 100
CviKI_1 RGCY 5 cut(s) 16, 30, 84, 94, 100
DpnI GATC 1 cut(s) 110
DpnII GATC 1 cut(s) 108
Eco31I GGTCTC 1 cut(s) 43
Eco47I GGWCC 1 cut(s) 173
Eco88I CYCGRG 1 cut(s) 95
EcoRII CCWGG 1 cut(s) 30
FaeI CATG 2 cut(s) 64, 70
FaiI YATR 3 cut(s) 62, 68, 81
FaqI GGGAC 1 cut(s) 159
FatI CATG 2 cut(s) 60, 66
FbaI TGATCA 1 cut(s) 108
FokI GGATG 1 cut(s) 22
GsaI CCCAGC 1 cut(s) 20
GsuI CTGGAG 1 cut(s) 53
HaeIII GGCC 2 cut(s) 30, 84
HapII CCGG 1 cut(s) 138
Hin1II CATG 2 cut(s) 64, 70
HinfI GANTC 1 cut(s) 43
HpaII CCGG 1 cut(s) 138
HphI GGTGA 1 cut(s) 172
Hpy166II GTNNAC 1 cut(s) 169
Hpy188III TCNNGA 1 cut(s) 40
Hpy8I GTNNAC 1 cut(s) 169
HpyAV CCTTC 2 cut(s) 157, 187
HpyCH4III ACNGT 1 cut(s) 173
HpyCH4V TGCA 1 cut(s) 60
Hsp92II CATG 2 cut(s) 64, 70
Ksp22I TGATCA 1 cut(s) 108
Kzo9I GATC 1 cut(s) 108
LpnPI CCDG 5 cut(s) 2, 17, 44, 151, 182
MaeIII GTNAC 2 cut(s) 21, 142
MalI GATC 1 cut(s) 110
MboI GATC 1 cut(s) 108
MboII GAAGA 1 cut(s) 185
MluCI AATT 1 cut(s) 113
MlyI GAGTC 1 cut(s) 37
MnlI CCTC 2 cut(s) 28, 128
MroXI GAANNNNTTC 1 cut(s) 192
MslI CAYNNNNRTG 1 cut(s) 65
MspI CCGG 1 cut(s) 138
MspR9I CCNGG 1 cut(s) 32
MvaI CCWGG 1 cut(s) 32
NdeII GATC 1 cut(s) 108
NlaIII CATG 2 cut(s) 64, 70
NlaIV GGNNCC 2 cut(s) 85, 175
NmuCI GTSAC 1 cut(s) 21
NspI RCATGY 1 cut(s) 70
PcsI WCGNNNNNNNCGW 1 cut(s) 138
PdmI GAANNNNTTC 1 cut(s) 192
PleI GAGTC 1 cut(s) 37
PpsI GAGTC 1 cut(s) 37
Psp6I CCWGG 1 cut(s) 30
PspFI CCCAGC 1 cut(s) 16
PspGI CCWGG 1 cut(s) 30
PspN4I GGNNCC 2 cut(s) 85, 175
PspPI GGNCC 2 cut(s) 83, 173
RseI CAYNNNNRTG 1 cut(s) 65
Sau3AI GATC 1 cut(s) 108
Sau96I GGNCC 2 cut(s) 83, 173
SchI GAGTC 1 cut(s) 37
ScrFI CCNGG 1 cut(s) 32
SetI ASST 3 cut(s) 18, 39, 149
SgrAI CRCCGGYG 1 cut(s) 137
SinI GGWCC 1 cut(s) 173
SmiMI CAYNNNNRTG 1 cut(s) 65
SmlI CTYRAG 1 cut(s) 45
SmoI CTYRAG 1 cut(s) 45
Sse9I AATT 1 cut(s) 113
StyD4I CCNGG 1 cut(s) 30
TaaI ACNGT 1 cut(s) 173
TaqI TCGA 2 cut(s) 41, 132
TasI AATT 1 cut(s) 113
TscAI CASTG 1 cut(s) 166
TseFI GTSAC 1 cut(s) 21
Tsp45I GTSAC 1 cut(s) 21
TspDTI ATGAA 1 cut(s) 26
TspGWI ACGGA 1 cut(s) 61
TspRI CASTG 1 cut(s) 166
VpaK11BI GGWCC 1 cut(s) 173
XapI RAATTY 1 cut(s) 113
XceI RCATGY 1 cut(s) 70
XmnI GAANNNNTTC 1 cut(s) 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.