Rh5AG264100

Ataxin 2 SM domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0001651
Physical Location & Seq
Forward (+)
34675770 .. 34693041
17272 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG264100.1

Sequence Viewer

Length: 2319 bp
ATGGACGAGAACTACATCCTCAACTGCTTCGGTCCCACCGGAGAGGCTGTGAATGCAAAGGTCATCCGTAACAAGCAAACAGGACTGCCAGAAGGGTATGGTTTTATTGAGTTTAGGACTCGCACTGCGGCTGAGCAGGTTTTGCAGAACTACAATGGTACAGTGATGCCCAACACTGAGCAGAATTTCCGCCTCAACTGGGCCACCCTGGGGGCTGGTGAAAGGCGCCAGGATGATGGCCCGGACTATACTGTTTTTGTTGGTGATTTGGCCGCTGATGTTACCGATTATACCCTTCAAGAGACATTTAGGGCTCATTACCACTCTGTGAAGGGTGCAAAAGTTGTCACTGATAGGACCACCGGACGCTCTAAGGGATATGGTTTTGTTAGGTTTGGGGATGAGAGTGAACAGTTGCGAGCAATGAATGAGATGAATGGTCAGTTTTGCTCTAGCAGACCCATGAGGATTGGGCCTGCTGCTACTAAGAAACCAGTTGGTGGTGGACAACCTTATCAAAAAGCTGCCTACCCAAGTTCTCAAGGAAATCCAGGCGAGGCTGACCCAAATAACACAACAATATTTGTTGGGGGTTTGGATCCCAGTGTCGATGATGAAATGTTGAGACAATCTTTTGGCATGTTTGGTGAGCTAGTTCATGTGAAGATACCAGTTGGCAAGCGATGTGGTTTTGTTCAATTTGCTAACAGAGCTTGTGCGGAGCAAGCATTGTCGGTGATGAATGGGCGAGTAGTGGGATCACAAAGTGTTAGGCTTTCTTGGGGCCGTAGTCCTTCAAGCAAACAGAACCAGCCAGAACAGACACAGTGGAATGGTGCTGGTGGTGCTGGATTTTATCAATATCCCCAAGGATATGATGCGTATACATATGCACCTCCTACCCAAGACCCTAACCTGTACTATGGAGGGTATGCTGGATATGGAAATTACCAGCAGCCTGGTGCAGCTTACCAACAGCAACAGCAGGGTTATGGTGATCCTGTTGTTTGGGATCAAATAGTGTCTGATCTGGGTTTAGTTACTGGAGTTTTACTTCCAGCTGATGGTGTTGCTGGAAATATGTCTGGTGACAGAACTGAAGCTGTTACGGGTACTGTTTCATCTGATGAGTGTTCAAAGAATGGTGCGAAGAAGTCAAGTGAGTCTGCCATAAATAAGAAGAAGGGTGGAAGGGTGCTAATGCAAAATGGGAATGACTTTCATGGTGTTACACCCACAAGGGCTGGCAAGGAACATGGAGGGAGGAATATGCCACTGAATCATATTGAGAATGCCTCAGAACTTGAAAAGAGAAGTGATGAGGTAAACTTATCAGAGATTAGAGAATCCTCTGGTGCCAGCATGAACAGGAGACAGGTGGATGATGGGTCTCAAGGGAAGCAGGATGATTTCAACCAGAAATTAGAGGTTTATAGGAAAGAAAGTGCTGACAAAGTTCAGGATACAAAGATGACATCCAAGCTCTCCCCTTTCGGAGTATCTTGTAATCCTTCTACTGTAATAGTTCAACAAGACATTCAGTGCTGTGAAAGGACAACTTCAGAATACACTTCTTCCAGTTCAAATGTTGTTTCTTCAGGTTCCTCAACTTTGTTGAATCCAGCTGCTAATGTCTCAAGTCGTAATTCAGAAACAACACCAACTGAAATGATCCCTCATGGTTCAGAGTTAAATAAAAGTGGCAAGGAATTTAAGCTCAACCCAGGAGCAAAAGTATTCTCGCCGTCTTTTACAAAGCCCATAGCAGCCACCTCTCCTGCAGTGCCAACAGTGGCAAGCATGGGTTTTATACCAACCAACTGCCCCGTGGTACCTGGTCCTGCCGTCCAGCCAGAAGTTGGATCGAATCCTTTCGCATCCCGTACATCTGTACCTGTTAAGGTTCTCCCATACAATAATTTCACAACTGGGAATGGTAGCAGTGCTTCTCAATTTTCACAACCTATTGTTGGACACATGAGCAGTAGGGCGCAGACAGTTAGGTATGCTGGTCAGTATCCTGTTCAGGCTGGACCGACCTATGTGCATCCAAATACTCAAGCTGTTATGGTAGGACGATTTGGACAGCTTGTCTATGTGCATCCAGTTTCTCAAGATTTGGTTCAGGGTACACCAGCCATCTCACCACTCTCTGCACGTCCTATGTTGACTCCACATCAGGTCCAGTTTCCGAAGCACCAAGGAACTGCAGGCCAAGCATTGCAGCTGTGTGTGCCTCCGCAGTTCATGGCTACTGGACAGCAGCCTTTTCCCATTGCCAAGTCGCATCCGATTTTTGCAACCTCCCTTCCGTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAM2 SM-ATX

Protein Analysis

772

Amino Acids

83.14

Weight (kDa)

7.92

Isoelectric Point (pI)

43.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 2 - 60 3.8e-09 RNA recognition motif
RRM_1 PF00076 85 - 155 1.9e-14 RNA recognition motif
RRM_1 PF00076 194 - 257 4.4e-14 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 127
Acc65I GGTACC 1 cut(s) 1831
AccB1I GGYRCC 3 cut(s) 225, 1355, 1831
AccB7I CCANNNNNTGG 3 cut(s) 500, 1064, 1859
AccI GTMKAC 1 cut(s) 884
AciI CCGC 5 cut(s) 128, 190, 273, 719, 2240
AclWI GGATC 7 cut(s) 593, 606, 766, 992, 1020, 1666, 1870
AcoI YGGCCR 1 cut(s) 270
AcsI RAATTY 2 cut(s) 184, 1709
AcuI CTGAAG 3 cut(s) 1119, 1545, 1581
AcyI GRCGYC 1 cut(s) 226
AdeI CACNNNGTG 2 cut(s) 328, 767
AfaI GTAC 7 cut(s) 160, 920, 1114, 1833, 1885, 1893, 2131
AfiI CCNNNNNNNGG 6 cut(s) 199, 210, 500, 1064, 1859, 1970
AgsI TTSAA 9 cut(s) 299, 698, 798, 1137, 1307, 1414, 1529, 1584, 1618
AhdI GACNNNNNGTC 1 cut(s) 2090
AjiI CACGTC 1 cut(s) 2159
AjnI CCWGG 6 cut(s) 207, 228, 550, 958, 1723, 1834
Alw26I GTCTC 5 cut(s) 296, 619, 1366, 1395, 1639
AlwI GGATC 7 cut(s) 593, 606, 766, 992, 1020, 1666, 1870
AoxI GGCC 6 cut(s) 201, 238, 270, 473, 784, 2212
ApeKI GCWGC 8 cut(s) 479, 524, 955, 965, 1625, 1766, 2224, 2263
ApoI RAATTY 2 cut(s) 184, 1709
Asp700I GAANNNNTTC 1 cut(s) 1871
Asp718I GGTACC 1 cut(s) 1831
AspLEI GCGC 2 cut(s) 228, 1993
AspS9I GGNCC 9 cut(s) 32, 201, 239, 357, 473, 784, 1838, 2033, 2182
AsuC2I CCSGG 1 cut(s) 242
AsuHPI GGTGA 7 cut(s) 230, 275, 659, 748, 1007, 1100, 2136
AvaII GGWCC 5 cut(s) 32, 357, 1838, 2033, 2182
BaeI ACNNNNGTAYC 2 cut(s) 1875, 1908
BamHI GGATCC 1 cut(s) 598
BanI GGYRCC 3 cut(s) 225, 1355, 1831
BanII GRGCYC 1 cut(s) 316
BarI GAAGNNNNNNTAC 2 cut(s) 1930, 1962
BbvI GCAGC 8 cut(s) 466, 511, 967, 977, 1612, 1778, 2236, 2275
BccI CCATC 4 cut(s) 230, 1058, 1379, 2147
BceAI ACGGC 3 cut(s) 771, 1729, 1829
BcgI CGANNNNNNTGC 2 cut(s) 2026, 2060
BciT130I CCWGG 6 cut(s) 209, 230, 552, 960, 1725, 1836
BciVI GTATCC 2 cut(s) 1456, 2028
BcnI CCSGG 1 cut(s) 242
BcoDI GTCTC 5 cut(s) 296, 619, 1366, 1395, 1639
BfaI CTAG 2 cut(s) 453, 653
BfmI CTRYAG 2 cut(s) 1779, 2208
BfoI RGCGCY 1 cut(s) 229
BfuAI ACCTGC 1 cut(s) 127
BfuI GTATCC 2 cut(s) 1456, 2028
BlpI GCTNAGC 1 cut(s) 132
Bme1390I CCNGG 7 cut(s) 209, 230, 242, 552, 960, 1725, 1836
Bme18I GGWCC 5 cut(s) 32, 357, 1838, 2033, 2182
BmeRI GACNNNNNGTC 1 cut(s) 2090
BmgBI CACGTC 1 cut(s) 2159
BmgT120I GGNCC 9 cut(s) 32, 201, 239, 357, 473, 784, 1838, 2033, 2182
BmiI GGNNCC 7 cut(s) 34, 227, 600, 785, 1357, 1603, 1833
BmrFI CCNGG 7 cut(s) 209, 230, 242, 552, 960, 1725, 1836
BmrI ACTGGG 3 cut(s) 208, 597, 1938
BmsI GCATC 6 cut(s) 156, 868, 1886, 2056, 2110, 2296
BmuI ACTGGG 3 cut(s) 208, 597, 1938
BplI GAGNNNNNCTC 2 cut(s) 1280, 1312
BpmI CTGGAG 1 cut(s) 1065
Bpu1102I GCTNAGC 1 cut(s) 132
BpuEI CTTGAG 5 cut(s) 525, 1377, 1621, 2043, 2097
BpuMI CCSGG 1 cut(s) 242
BsaHI GRCGYC 1 cut(s) 226
BsaI GGTCTC 1 cut(s) 1395
BsaJI CCNNGG 6 cut(s) 207, 208, 868, 1723, 1827, 2200
BsaWI WCCGGW 2 cut(s) 38, 362
BsaXI ACNNNNNCTCC 4 cut(s) 33, 63, 1719, 1749
Bsc4I CCNNNNNNNGG 6 cut(s) 199, 210, 500, 1064, 1859, 1970
Bse3DI GCAATG 3 cut(s) 429, 2219, 2274
BseBI CCWGG 6 cut(s) 209, 230, 552, 960, 1725, 1836
BseDI CCNNGG 6 cut(s) 207, 208, 868, 1723, 1827, 2200
BseLI CCNNNNNNNGG 6 cut(s) 199, 210, 500, 1064, 1859, 1970
BseMI GCAATG 3 cut(s) 429, 2219, 2274
BseMII CTCAG 3 cut(s) 123, 168, 1311
BseXI GCAGC 8 cut(s) 466, 511, 967, 977, 1612, 1778, 2236, 2275
BsgI GTGCAG 2 cut(s) 984, 2139
BshFI GGCC 6 cut(s) 203, 240, 272, 475, 786, 2214
BshNI GGYRCC 3 cut(s) 225, 1355, 1831
BsiSI CCGG 3 cut(s) 39, 242, 363
BslFI GGGAC 1 cut(s) 18
BslI CCNNNNNNNGG 6 cut(s) 199, 210, 500, 1064, 1859, 1970
BsmAI GTCTC 5 cut(s) 296, 619, 1366, 1395, 1639
BsmFI GGGAC 1 cut(s) 18
BsmI GAATGC 2 cut(s) 58, 1297
BsnI GGCC 6 cut(s) 203, 240, 272, 475, 786, 2214
Bso31I GGTCTC 1 cut(s) 1395
Bsp1286I GDGCHC 1 cut(s) 316
Bsp143I GATC 7 cut(s) 598, 758, 997, 1012, 1027, 1671, 1862
Bsp1720I GCTNAGC 1 cut(s) 132
BspACI CCGC 5 cut(s) 128, 190, 273, 719, 2240
BspANI GGCC 6 cut(s) 203, 240, 272, 475, 786, 2214
BspCNI CTCAG 3 cut(s) 124, 169, 1310
BspLI GGNNCC 7 cut(s) 34, 227, 600, 785, 1357, 1603, 1833
BspMAI CTGCAG 2 cut(s) 1783, 2212
BspMI ACCTGC 1 cut(s) 127
BspPI GGATC 7 cut(s) 593, 606, 766, 992, 1020, 1666, 1870
BspT107I GGYRCC 3 cut(s) 225, 1355, 1831
BspTNI GGTCTC 1 cut(s) 1395
BsrDI GCAATG 3 cut(s) 429, 2219, 2274
BssECI CCNNGG 6 cut(s) 207, 208, 868, 1723, 1827, 2200
BssMI GATC 7 cut(s) 598, 758, 997, 1012, 1027, 1671, 1862
BssNAI GTATAC 1 cut(s) 885
BssNI GRCGYC 1 cut(s) 226
BssT1I CCWWGG 2 cut(s) 868, 2200
Bst1107I GTATAC 1 cut(s) 885
Bst2UI CCWGG 6 cut(s) 209, 230, 552, 960, 1725, 1836
Bst4CI ACNGT 8 cut(s) 163, 253, 414, 828, 1117, 1519, 1792, 1999
BstACI GRCGYC 1 cut(s) 226
BstAPI GCANNNNNTGC 1 cut(s) 142
BstC8I GCNNGC 8 cut(s) 420, 477, 680, 726, 1246, 1360, 1798, 2212
BstDEI CTNAG 5 cut(s) 132, 177, 372, 486, 1297
BstDSI CCRYGG 1 cut(s) 1827
BstH2I RGCGCY 1 cut(s) 229
BstHHI GCGC 2 cut(s) 228, 1993
BstKTI GATC 7 cut(s) 601, 761, 1000, 1015, 1030, 1674, 1865
BstMAI GTCTC 5 cut(s) 296, 619, 1366, 1395, 1639
BstMBI GATC 7 cut(s) 598, 758, 997, 1012, 1027, 1671, 1862
BstMWI GCNNNNNNNGC 7 cut(s) 53, 142, 710, 725, 845, 2216, 2233
BstNI CCWGG 6 cut(s) 209, 230, 552, 960, 1725, 1836
BstNSI RCATGY 1 cut(s) 643
BstSCI CCNGG 7 cut(s) 207, 228, 240, 550, 958, 1723, 1834
BstSFI CTRYAG 2 cut(s) 1779, 2208
BstV1I GCAGC 8 cut(s) 466, 511, 967, 977, 1612, 1778, 2236, 2275
BstX2I RGATCY 1 cut(s) 598
BstXI CCANNNNNNTGG 2 cut(s) 236, 959
BstYI RGATCY 1 cut(s) 598
BstZ17I GTATAC 1 cut(s) 885
BsuI GTATCC 2 cut(s) 1456, 2028
BsuRI GGCC 6 cut(s) 203, 240, 272, 475, 786, 2214
BtgI CCRYGG 1 cut(s) 1827
BtgZI GCGATG 1 cut(s) 697
BtrI CACGTC 1 cut(s) 2159
BtsI GCAGTG 3 cut(s) 123, 1788, 1948
BveI ACCTGC 1 cut(s) 127
Cac8I GCNNGC 8 cut(s) 420, 477, 680, 726, 1246, 1360, 1798, 2212
CfoI GCGC 2 cut(s) 228, 1993
Cfr13I GGNCC 9 cut(s) 32, 201, 239, 357, 473, 784, 1838, 2033, 2182
CseI GACGC 1 cut(s) 375
CsiI ACCWGGT 1 cut(s) 1834
Csp6I GTAC 7 cut(s) 159, 919, 1113, 1832, 1884, 1892, 2130
CspCI CAANNNNNGTGG 2 cut(s) 667, 702
CviQI GTAC 7 cut(s) 159, 919, 1113, 1832, 1884, 1892, 2130
DdeI CTNAG 5 cut(s) 132, 177, 372, 486, 1297
DinI GGCGCC 1 cut(s) 227
DpnI GATC 7 cut(s) 600, 760, 999, 1014, 1029, 1673, 1864
DpnII GATC 7 cut(s) 598, 758, 997, 1012, 1027, 1671, 1862
DraIII CACNNNGTG 2 cut(s) 328, 767
DriI GACNNNNNGTC 1 cut(s) 2090
EaeI YGGCCR 1 cut(s) 270
Eam1105I GACNNNNNGTC 1 cut(s) 2090
EciI GGCGGA 1 cut(s) 179
Eco130I CCWWGG 2 cut(s) 868, 2200
Eco24I GRGCYC 1 cut(s) 316
Eco31I GGTCTC 1 cut(s) 1395
Eco47I GGWCC 5 cut(s) 32, 357, 1838, 2033, 2182
Eco57I CTGAAG 3 cut(s) 1119, 1545, 1581
EcoRII CCWGG 6 cut(s) 207, 228, 550, 958, 1723, 1834
EcoT14I CCWWGG 2 cut(s) 868, 2200
EcoT38I GRGCYC 1 cut(s) 316
EgeI GGCGCC 1 cut(s) 227
EheI GGCGCC 1 cut(s) 227
ErhI CCWWGG 2 cut(s) 868, 2200
FalI AAGNNNNNCTT 2 cut(s) 1543, 1575
FaqI GGGAC 1 cut(s) 18
FauNDI CATATG 1 cut(s) 889
FblI GTMKAC 1 cut(s) 884
FriOI GRGCYC 1 cut(s) 316
FspBI CTAG 2 cut(s) 453, 653
GlaI GCGC 2 cut(s) 227, 1992
GsuI CTGGAG 1 cut(s) 1065
HaeII RGCGCY 1 cut(s) 229
HaeIII GGCC 6 cut(s) 203, 240, 272, 475, 786, 2214
HapII CCGG 3 cut(s) 39, 242, 363
HgaI GACGC 1 cut(s) 375
HhaI GCGC 2 cut(s) 228, 1993
Hin1I GRCGYC 1 cut(s) 226
Hin6I GCGC 2 cut(s) 226, 1991
HinP1I GCGC 2 cut(s) 226, 1991
HincII GTYRAC 1 cut(s) 2169
HindII GTYRAC 1 cut(s) 2169
HinfI GANTC 7 cut(s) 118, 1163, 1279, 1346, 1618, 1867, 2170
HpaII CCGG 3 cut(s) 39, 242, 363
HphI GGTGA 7 cut(s) 230, 275, 659, 748, 1007, 1100, 2136
Hpy166II GTNNAC 6 cut(s) 410, 506, 885, 1327, 2132, 2169
Hpy188III TCNNGA 3 cut(s) 299, 1460, 2114
Hpy8I GTNNAC 6 cut(s) 410, 506, 885, 1327, 2132, 2169
HpyAV CCTTC 8 cut(s) 86, 305, 325, 804, 1177, 1185, 1521, 2318
HpyCH4III ACNGT 8 cut(s) 163, 253, 414, 828, 1117, 1519, 1792, 1999
HpyCH4IV ACGT 1 cut(s) 2158
HpyF10VI GCNNNNNNNGC 7 cut(s) 53, 142, 710, 725, 845, 2216, 2233
HpyF3I CTNAG 5 cut(s) 132, 177, 372, 486, 1297
HpySE526I ACGT 1 cut(s) 2158
Hsp92I GRCGYC 1 cut(s) 226
HspAI GCGC 2 cut(s) 226, 1991
KasI GGCGCC 1 cut(s) 225
KpnI GGTACC 1 cut(s) 1835
Kzo9I GATC 7 cut(s) 598, 758, 997, 1012, 1027, 1671, 1862
LmnI GCTCC 2 cut(s) 721, 1727
Lsp1109I GCAGC 8 cut(s) 466, 511, 967, 977, 1612, 1778, 2236, 2275
LweI GCATC 6 cut(s) 156, 868, 1886, 2056, 2110, 2296
MabI ACCWGGT 1 cut(s) 1834
MaeI CTAG 2 cut(s) 453, 653
MaeII ACGT 1 cut(s) 2158
MaeIII GTNAC 7 cut(s) 68, 280, 346, 1039, 1088, 1105, 1228
MalI GATC 7 cut(s) 600, 760, 999, 1014, 1029, 1673, 1864
MboI GATC 7 cut(s) 598, 758, 997, 1012, 1027, 1671, 1862
MboII GAAGA 5 cut(s) 676, 1162, 1192, 1566, 1587
MflI RGATCY 1 cut(s) 598
MhlI GDGCHC 1 cut(s) 316
MluCI AATT 8 cut(s) 184, 698, 946, 1421, 1645, 1709, 1918, 1952
Mly113I GGCGCC 1 cut(s) 226
MlyI GAGTC 3 cut(s) 112, 1172, 2164
MmeI TCCRAC 2 cut(s) 1840, 1951
MroXI GAANNNNTTC 1 cut(s) 1871
MseI TTAA 3 cut(s) 1691, 1713, 1899
MspA1I CMGCKG 4 cut(s) 275, 1061, 1625, 2227
MspI CCGG 3 cut(s) 39, 242, 363
MspR9I CCNGG 7 cut(s) 209, 230, 242, 552, 960, 1725, 1836
Mva1269I GAATGC 2 cut(s) 58, 1297
MvaI CCWGG 6 cut(s) 209, 230, 552, 960, 1725, 1836
MwoI GCNNNNNNNGC 7 cut(s) 53, 142, 710, 725, 845, 2216, 2233
NarI GGCGCC 1 cut(s) 226
NciI CCSGG 1 cut(s) 242
NdeI CATATG 1 cut(s) 889
NdeII GATC 7 cut(s) 598, 758, 997, 1012, 1027, 1671, 1862
NlaIV GGNNCC 7 cut(s) 34, 227, 600, 785, 1357, 1603, 1833
NmuCI GTSAC 2 cut(s) 346, 1088
NspI RCATGY 1 cut(s) 643
PasI CCCWGGG 1 cut(s) 208
PctI GAATGC 2 cut(s) 58, 1297
PdmI GAANNNNTTC 1 cut(s) 1871
PfeI GAWTC 4 cut(s) 1279, 1346, 1618, 1867
PflMI CCANNNNNTGG 3 cut(s) 500, 1064, 1859
PleI GAGTC 3 cut(s) 112, 1171, 2164
PluTI GGCGCC 1 cut(s) 229
PpsI GAGTC 3 cut(s) 112, 1171, 2164
Psp6I CCWGG 6 cut(s) 207, 228, 550, 958, 1723, 1834
PspGI CCWGG 6 cut(s) 207, 228, 550, 958, 1723, 1834
PspN4I GGNNCC 7 cut(s) 34, 227, 600, 785, 1357, 1603, 1833
PspPI GGNCC 9 cut(s) 32, 201, 239, 357, 473, 784, 1838, 2033, 2182
PstI CTGCAG 2 cut(s) 1783, 2212
PsuI RGATCY 1 cut(s) 598
PvuII CAGCTG 3 cut(s) 1061, 1625, 2227
RsaI GTAC 7 cut(s) 160, 920, 1114, 1833, 1885, 1893, 2131
RsaNI GTAC 7 cut(s) 159, 919, 1113, 1832, 1884, 1892, 2130
SaqAI TTAA 3 cut(s) 1691, 1713, 1899
Sau3AI GATC 7 cut(s) 598, 758, 997, 1012, 1027, 1671, 1862
Sau96I GGNCC 9 cut(s) 32, 201, 239, 357, 473, 784, 1838, 2033, 2182
SchI GAGTC 3 cut(s) 112, 1172, 2164
ScrFI CCNGG 7 cut(s) 209, 230, 242, 552, 960, 1725, 1836
SduI GDGCHC 1 cut(s) 316
SexAI ACCWGGT 1 cut(s) 1834
SfaNI GCATC 6 cut(s) 156, 868, 1886, 2056, 2110, 2296
SfcI CTRYAG 2 cut(s) 1779, 2208
SfoI GGCGCC 1 cut(s) 227
SinI GGWCC 5 cut(s) 32, 357, 1838, 2033, 2182
SmlI CTYRAG 5 cut(s) 540, 1392, 1636, 2058, 2112
SmoI CTYRAG 5 cut(s) 540, 1392, 1636, 2058, 2112
Sse9I AATT 8 cut(s) 184, 698, 946, 1421, 1645, 1709, 1918, 1952
SsiI CCGC 5 cut(s) 128, 190, 273, 719, 2240
SspDI GGCGCC 1 cut(s) 225
SspI AATATT 1 cut(s) 582
SspMI CTAG 2 cut(s) 453, 653
StyD4I CCNGG 7 cut(s) 207, 228, 240, 550, 958, 1723, 1834
StyI CCWWGG 2 cut(s) 868, 2200
TaaI ACNGT 8 cut(s) 163, 253, 414, 828, 1117, 1519, 1792, 1999
TaiI ACGT 1 cut(s) 2161
TaqI TCGA 2 cut(s) 609, 1865
TaqII GACCGA 2 cut(s) 20, 2050
TasI AATT 8 cut(s) 184, 698, 946, 1421, 1645, 1709, 1918, 1952
TatI WGTACW 1 cut(s) 918
TauI GCSGC 2 cut(s) 131, 275
TfiI GAWTC 4 cut(s) 1279, 1346, 1618, 1867
Tru1I TTAA 3 cut(s) 1691, 1713, 1899
Tru9I TTAA 3 cut(s) 1691, 1713, 1899
TseFI GTSAC 2 cut(s) 346, 1088
TseI GCWGC 8 cut(s) 479, 524, 955, 965, 1625, 1766, 2224, 2263
Tsp45I GTSAC 2 cut(s) 346, 1088
TspDTI ATGAA 9 cut(s) 440, 449, 630, 647, 755, 1110, 1211, 1379, 2236
TspGWI ACGGA 2 cut(s) 56, 2301
Van91I CCANNNNNTGG 3 cut(s) 500, 1064, 1859
VpaK11BI GGWCC 5 cut(s) 32, 357, 1838, 2033, 2182
XapI RAATTY 2 cut(s) 184, 1709
XceI RCATGY 1 cut(s) 643
XcmI CCANNNNNNNNNTGG 2 cut(s) 1825, 1856
XmiI GTMKAC 1 cut(s) 884
XmnI GAANNNNTTC 1 cut(s) 1871
XspI CTAG 2 cut(s) 453, 653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.