Rh6BG146700

Ran-binding protein 1 homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
23643828 .. 23645581
1754 bp
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UTR
Exon/CDS
Intron
Rh6BG146700.1

Sequence Viewer

Length: 282 bp
ATGACAGTTCAGGAGCACGCTACTAACTTTGCTGATGGTAAATTGAAGGAAGAGCTTTTCTGCATTAGATTCGCTTCAATTGAGTCTGCTAGAAAATCCGCTTTATTTGGTTCTGAACCTTCAAATTCTATTCTGAATTTGGCGACAAAGATGCTAGCAGTGCTCTGGAGGTTTCTAGTATTATTCAACCAAAAGATTGAGGAAGCTGAATTTAGTGAAGGAGTTAATCCCAAACTCAATGGGTGTTCAGAGAGAACCATGTACGGTGGATACGACTCCTGA

Protein Analysis

93

Amino Acids

10.43

Weight (kDa)

5.36

Isoelectric Point (pI)

43.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 99
AcsI RAATTY 3 cut(s) 124, 136, 209
AfaI GTAC 1 cut(s) 263
AgsI TTSAA 4 cut(s) 46, 78, 123, 187
AluBI AGCT 2 cut(s) 55, 206
AluI AGCT 2 cut(s) 55, 206
Alw21I GWGCWC 2 cut(s) 18, 165
ApoI RAATTY 3 cut(s) 124, 136, 209
AsuNHI GCTAGC 1 cut(s) 154
Bbv12I GWGCWC 2 cut(s) 18, 165
BccI CCATC 1 cut(s) 29
BcgI CGANNNNNNTGC 4 cut(s) 52, 86, 133, 167
BciVI GTATCC 1 cut(s) 263
BfaI CTAG 3 cut(s) 90, 155, 176
BfuI GTATCC 1 cut(s) 263
BmsI GCATC 1 cut(s) 141
BmtI GCTAGC 1 cut(s) 158
BpmI CTGGAG 1 cut(s) 187
BsiHKAI GWGCWC 2 cut(s) 18, 165
Bsp1286I GDGCHC 2 cut(s) 18, 165
BspACI CCGC 1 cut(s) 99
BspOI GCTAGC 1 cut(s) 158
BspQI GCTCTTC 1 cut(s) 45
Bst4CI ACNGT 2 cut(s) 7, 266
Bst6I CTCTTC 1 cut(s) 45
BstC8I GCNNGC 2 cut(s) 18, 156
BstMWI GCNNNNNNNGC 1 cut(s) 160
BsuI GTATCC 1 cut(s) 263
BtsI GCAGTG 1 cut(s) 165
BtsIMutI CAGTG 1 cut(s) 165
Cac8I GCNNGC 2 cut(s) 18, 156
Csp6I GTAC 1 cut(s) 262
CviAII CATG 1 cut(s) 259
CviJI RGCY 2 cut(s) 55, 206
CviKI_1 RGCY 2 cut(s) 55, 206
CviQI GTAC 1 cut(s) 262
Eam1104I CTCTTC 1 cut(s) 45
EarI CTCTTC 1 cut(s) 45
FaeI CATG 1 cut(s) 262
FaiI YATR 1 cut(s) 260
FatI CATG 1 cut(s) 258
FspBI CTAG 3 cut(s) 90, 155, 176
GsuI CTGGAG 1 cut(s) 187
Hin1II CATG 1 cut(s) 262
HinfI GANTC 3 cut(s) 69, 83, 275
Hpy188I TCNGA 3 cut(s) 115, 135, 250
Hpy188III TCNNGA 3 cut(s) 11, 166, 279
HpyAV CCTTC 3 cut(s) 40, 129, 212
HpyCH4III ACNGT 2 cut(s) 7, 266
HpyCH4V TGCA 1 cut(s) 63
HpyF10VI GCNNNNNNNGC 1 cut(s) 160
Hsp92II CATG 1 cut(s) 262
LguI GCTCTTC 1 cut(s) 45
LmnI GCTCC 1 cut(s) 13
LpnPI CCDG 1 cut(s) 151
LweI GCATC 1 cut(s) 141
MaeI CTAG 3 cut(s) 90, 155, 176
MboII GAAGA 1 cut(s) 62
MfeI CAATTG 1 cut(s) 78
MhlI GDGCHC 2 cut(s) 18, 165
MluCI AATT 5 cut(s) 41, 78, 124, 136, 209
MlyI GAGTC 2 cut(s) 92, 269
MnlI CCTC 2 cut(s) 162, 193
MseI TTAA 1 cut(s) 225
MunI CAATTG 1 cut(s) 78
MwoI GCNNNNNNNGC 1 cut(s) 160
NheI GCTAGC 1 cut(s) 154
NlaIII CATG 1 cut(s) 262
PciSI GCTCTTC 1 cut(s) 45
PcsI WCGNNNNNNNCGW 1 cut(s) 270
PfeI GAWTC 1 cut(s) 69
PleI GAGTC 2 cut(s) 91, 269
PpsI GAGTC 2 cut(s) 91, 269
RsaI GTAC 1 cut(s) 263
RsaNI GTAC 1 cut(s) 262
SapI GCTCTTC 1 cut(s) 45
SaqAI TTAA 1 cut(s) 225
SchI GAGTC 2 cut(s) 92, 269
SduI GDGCHC 2 cut(s) 18, 165
SetI ASST 4 cut(s) 57, 121, 173, 208
SfaNI GCATC 1 cut(s) 141
SgeI CNNG 7 cut(s) 23, 29, 102, 167, 178, 188, 271
Sse9I AATT 5 cut(s) 41, 78, 124, 136, 209
SsiI CCGC 1 cut(s) 99
SspMI CTAG 3 cut(s) 90, 155, 176
TaaI ACNGT 2 cut(s) 7, 266
TasI AATT 5 cut(s) 41, 78, 124, 136, 209
TfiI GAWTC 1 cut(s) 69
Tru1I TTAA 1 cut(s) 225
Tru9I TTAA 1 cut(s) 225
TscAI CASTG 1 cut(s) 165
TspRI CASTG 1 cut(s) 165
XapI RAATTY 3 cut(s) 124, 136, 209
XspI CTAG 3 cut(s) 90, 155, 176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.