No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g01511 FvH4_7g01562 |
| malus_domestica | MD02G1303100.v1.1 MD02G1303600.v1.1 MD02G1305000.v1.1 MD07G1021100.v1.1 |
| pyrus_communis | pycom03g13000 |
| rosa_chinensis | RchiOBHm_Chr1g0317491 RchiOBHm_Chr1g0317571 RchiOBHm_Chr1g0317671 RchiOBHm_Chr1g0339871 RchiOBHm_Chr1g0350261 RchiOBHm_Chr6g0278881 |
| rosa_laevigata | RLG00000008039 RLG00000018453 |
| rosa_multiflora | Rmu_sc0001037.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00227970 Rroxscaffold_7G00208320 |
| rosa_rugosa | Rorug04G0048200 |
| rosa_samantha | Rh1AG027600 Rh1AG027700 Rh1AG028100 Rh1AG028200 Rh1AG028500 Rh1AG028600 Rh1AG028800 Rh1AG029000 Rh1BG023500 Rh1BG065400 Rh2AG270400 Rh2BG281800 Rh2DG278200 Rh6BG365600 Rh6CG236400 Rh6DG227600 |
| rosa_wichuraiana | Rw0G018780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 113 |
| AclWI | GGATC | 1 cut(s) | 303 |
| AcsI | RAATTY | 1 cut(s) | 38 |
| AfaI | GTAC | 1 cut(s) | 127 |
| AflIII | ACRYGT | 1 cut(s) | 272 |
| AgeI | ACCGGT | 1 cut(s) | 314 |
| AgsI | TTSAA | 3 cut(s) | 48, 57, 211 |
| AlwI | GGATC | 1 cut(s) | 303 |
| ApoI | RAATTY | 1 cut(s) | 38 |
| AsiGI | ACCGGT | 1 cut(s) | 314 |
| AsuHPI | GGTGA | 2 cut(s) | 235, 329 |
| BfmI | CTRYAG | 1 cut(s) | 133 |
| BsaWI | WCCGGW | 1 cut(s) | 314 |
| Bse118I | RCCGGY | 1 cut(s) | 314 |
| BshTI | ACCGGT | 1 cut(s) | 314 |
| BsiSI | CCGG | 1 cut(s) | 315 |
| BslFI | GGGAC | 1 cut(s) | 195 |
| BsmFI | GGGAC | 1 cut(s) | 195 |
| Bsp143I | GATC | 2 cut(s) | 295, 319 |
| BspPI | GGATC | 1 cut(s) | 303 |
| BsrFI | RCCGGY | 1 cut(s) | 314 |
| BssAI | RCCGGY | 1 cut(s) | 314 |
| BssMI | GATC | 2 cut(s) | 295, 319 |
| Bst4CI | ACNGT | 1 cut(s) | 134 |
| BstKTI | GATC | 2 cut(s) | 298, 322 |
| BstMBI | GATC | 2 cut(s) | 295, 319 |
| BstNSI | RCATGY | 1 cut(s) | 276 |
| BstSFI | CTRYAG | 1 cut(s) | 133 |
| BstX2I | RGATCY | 1 cut(s) | 295 |
| BstYI | RGATCY | 1 cut(s) | 295 |
| Cfr10I | RCCGGY | 1 cut(s) | 314 |
| Csp6I | GTAC | 1 cut(s) | 126 |
| CspAI | ACCGGT | 1 cut(s) | 314 |
| CviAII | CATG | 5 cut(s) | 13, 108, 273, 283, 291 |
| CviQI | GTAC | 1 cut(s) | 126 |
| DpnI | GATC | 2 cut(s) | 297, 321 |
| DpnII | GATC | 2 cut(s) | 295, 319 |
| Eco32I | GATATC | 1 cut(s) | 99 |
| EcoRV | GATATC | 1 cut(s) | 99 |
| FaeI | CATG | 5 cut(s) | 16, 111, 276, 286, 294 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 178, 210 |
| FaqI | GGGAC | 1 cut(s) | 195 |
| FatI | CATG | 5 cut(s) | 12, 107, 272, 282, 290 |
| FblI | GTMKAC | 1 cut(s) | 113 |
| HapII | CCGG | 1 cut(s) | 315 |
| Hin1II | CATG | 5 cut(s) | 16, 111, 276, 286, 294 |
| HincII | GTYRAC | 2 cut(s) | 201, 270 |
| HindII | GTYRAC | 2 cut(s) | 201, 270 |
| HinfI | GANTC | 1 cut(s) | 65 |
| HpaI | GTTAAC | 2 cut(s) | 201, 270 |
| HpaII | CCGG | 1 cut(s) | 315 |
| HphI | GGTGA | 2 cut(s) | 235, 329 |
| Hpy166II | GTNNAC | 4 cut(s) | 114, 201, 256, 270 |
| Hpy188III | TCNNGA | 1 cut(s) | 323 |
| Hpy8I | GTNNAC | 4 cut(s) | 114, 201, 256, 270 |
| HpyCH4III | ACNGT | 1 cut(s) | 134 |
| HpyCH4V | TGCA | 1 cut(s) | 16 |
| Hsp92II | CATG | 5 cut(s) | 16, 111, 276, 286, 294 |
| KspAI | GTTAAC | 2 cut(s) | 201, 270 |
| Kzo9I | GATC | 2 cut(s) | 295, 319 |
| LpnPI | CCDG | 3 cut(s) | 135, 260, 328 |
| MalI | GATC | 2 cut(s) | 297, 321 |
| MboI | GATC | 2 cut(s) | 295, 319 |
| MboII | GAAGA | 1 cut(s) | 290 |
| MflI | RGATCY | 1 cut(s) | 295 |
| MluCI | AATT | 2 cut(s) | 4, 38 |
| MmeI | TCCRAC | 1 cut(s) | 42 |
| MnlI | CCTC | 1 cut(s) | 319 |
| MseI | TTAA | 5 cut(s) | 36, 87, 200, 269, 311 |
| MspI | CCGG | 1 cut(s) | 315 |
| NdeII | GATC | 2 cut(s) | 295, 319 |
| NlaIII | CATG | 5 cut(s) | 16, 111, 276, 286, 294 |
| NspI | RCATGY | 1 cut(s) | 276 |
| PciI | ACATGT | 1 cut(s) | 272 |
| PfeI | GAWTC | 1 cut(s) | 65 |
| PinAI | ACCGGT | 1 cut(s) | 314 |
| PscI | ACATGT | 1 cut(s) | 272 |
| PsuI | RGATCY | 1 cut(s) | 295 |
| RsaI | GTAC | 1 cut(s) | 127 |
| RsaNI | GTAC | 1 cut(s) | 126 |
| SaqAI | TTAA | 5 cut(s) | 36, 87, 200, 269, 311 |
| Sau3AI | GATC | 2 cut(s) | 295, 319 |
| SfcI | CTRYAG | 1 cut(s) | 133 |
| SmlI | CTYRAG | 1 cut(s) | 323 |
| SmoI | CTYRAG | 1 cut(s) | 323 |
| Sse9I | AATT | 2 cut(s) | 4, 38 |
| SspI | AATATT | 2 cut(s) | 207, 214 |
| TaaI | ACNGT | 1 cut(s) | 134 |
| TasI | AATT | 2 cut(s) | 4, 38 |
| TfiI | GAWTC | 1 cut(s) | 65 |
| Tru1I | TTAA | 5 cut(s) | 36, 87, 200, 269, 311 |
| Tru9I | TTAA | 5 cut(s) | 36, 87, 200, 269, 311 |
| TspDTI | ATGAA | 2 cut(s) | 17, 149 |
| XapI | RAATTY | 1 cut(s) | 38 |
| XceI | RCATGY | 1 cut(s) | 276 |
| XmiI | GTMKAC | 1 cut(s) | 113 |