Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002697

Physical Location & Seq

Genomic Coordinates Reverse (-)

23752789 .. 23754348

Gene Structure 1560 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G64030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1158 bp

ATGGATGTAAGAGAAGCTATGAAGAACCAAACCCACGTTGCCATGATCCTTTCCGGGCACGTCTTATCTTCCGCGCCCAAAGACTCTAACGTCATCTTCTCACCGGCGTCAATAAACTCTGCGATCACGATGCACGCCGCTGGTCCCGGAGGTGATTTAGTCTCCGGCCAAATCCTCTCCTTCCTAAGATCATCTTCAATTGATGAGCTCAAAACCGTGTTCCGAGAACTAGCCTCCGTCGTCTATGCCGACAGAAGCGCCACCGGCGGCCCAAAGATAACGGCGGCGAATGGCCTTTGGATTGATAAATCACTTCCGACTGATCCCAAGTTCAAGGACCTCTTCGAGAACTTCTTTAAGGCTGTTTATGTTCCAGTAGATTTCCGATCAGAGGCTGAAGAAGTGCGTAAGGAGGTGAATTCATGGGTTGAACATCACACCAATAATCTGATCAAGGATCTTCTTCCTGATGGATCCGTGACAAGCCTAACCAACAAGATTTACGCAAACGCATTGTCTTTCAAGGGAGCTTGGAAAAGACCATTTGAAAAGTACTATACAAGAGATAATGACTTCTACCTTGTCAATGGCACATCAGTCTCTGTGCCATTCATGTCCAGCTATGAGAACCAATACGTAAGAGCTTATGACGGTTTCAAGGTCCTCAGGCTTCCTTACCAACGAGGCAGTGATGATACCAATCGTAAATTCTCAATGTATTTCTATCTCCCAGACAAGAAAGATGGATTGGATGATCTCTTGGAGAAAATGGCATCTACACCTGGATTCTTGGATAGTCACATTCCGACATATAGAGATGAACTTGAGAAATTTAGAATTCCAAAGTTTAAGATCGAATTCGGTTTTTCTGTTACAAGCGTTTTGGATCGATTGGGATTGCGTTCAATGTCAATGTACCATAAAGCTTGTGTCGAGATTGATGAAGAAGGTGCTGAAGCTGCGGCTGCTACTGCTGATGGAGATTGTGGTTGTTCTCTTGATTTTGTGGAGCCTCCTAAGAAGATAGATTTTGTGGCCGATCATCCATTTCTTTTCTTGATTCGAGAAGAAAAAACTGGAACCGTTTTGTTCGTTGGTCAGATCTTTGATCCTTCGGGACCTTGTTCGGGATCTAATTCGGACTCAGATGACTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0004857 GO:0004866 GO:0004867 GO:0004869 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010466 GO:0010605 GO:0010951 GO:0019222 GO:0030162 GO:0030234 GO:0030414 GO:0031323 GO:0031324 GO:0032268 GO:0032269 GO:0033554 GO:0034641 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045861 GO:0046483 GO:0048046 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0061134 GO:0061135 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0090304 GO:0098772 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00190 ko01100 ko05146 map00190 map01100 map05146

Pfam Domains

Protein Families

Serpin

Protein Analysis

385

Amino Acids

42.99

Weight (kDa)

5.23

Isoelectric Point (pI)

35.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Serpin	PF00079	10 - 302	1.8e-62	Serpin (serine protease inhibitor)
Serpin	PF00079	305 - 371	6.2e-18	Serpin (serine protease inhibitor)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002697)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47710 AT1G47710 AT1G51330 AT1G62160 AT1G62170 AT1G62170 AT1G63280 AT1G64010 AT1G64010 AT1G64030 AT2G14540 AT2G25240 AT2G26390 AT2G35580 AT3G45220
fragaria_vesca	FvH4_2g40700
malus_domestica	MD08G1040600.v1.1 MD08G1041200.v1.1 MD08G1041300.v1.1 MD08G1041500.v1.1 MD08G1041600.v1.1 MD14G1097300.v1.1 MD15G1035000.v1.1 MD15G1286900.v1.1
prunus_persica	Prupe.1G389200_v2.0.a1 Prupe.1G389300_v2.0.a1 Prupe.3G141200_v2.0.a1
pyrus_communis	pycom08g03320 pycom08g03330 pycom08g03340 pycom08g03360 pycom15g03220
rosa_chinensis	RchiOBHm_Chr6g0299901
rosa_laevigata	RLG00000011377
rosa_multiflora	Rmu_ssc0000158.1_g000016
rosa_roxburghii	Rroxscaffold_7G00168290
rosa_rugosa	Rorug06G0293100
rosa_samantha	Rh4AG219100
rosa_wichuraiana	Rw6G035390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	89
AccII	CGCG	1 cut(s)	74
AciI	CCGC	5 cut(s)	72, 138, 267, 284, 962
AclWI	GGATC	8 cut(s)	40, 317, 465, 468, 481, 894, 1103, 1138
AcoI	YGGCCR	2 cut(s)	166, 1035
AcsI	RAATTY	5 cut(s)	418, 707, 830, 837, 857
AcuI	CTGAAG	2 cut(s)	417, 975
AcyI	GRCGYC	1 cut(s)	107
AfaI	GTAC	2 cut(s)	554, 917
AfiI	CCNNNNNNNGG	2 cut(s)	391, 1127
AgsI	TTSAA	7 cut(s)	198, 334, 431, 523, 548, 658, 906
AjiI	CACGTC	1 cut(s)	61
AjnI	CCWGG	1 cut(s)	781
AjuI	GAANNNNNNNTTGG	4 cut(s)	692, 724, 731, 763
AluBI	AGCT	7 cut(s)	17, 208, 530, 621, 644, 926, 959
AluI	AGCT	7 cut(s)	17, 208, 530, 621, 644, 926, 959
Alw21I	GWGCWC	1 cut(s)	210
Alw26I	GTCTC	2 cut(s)	166, 604
AlwI	GGATC	8 cut(s)	40, 317, 465, 468, 481, 894, 1103, 1138
AlwNI	CAGNNNCTG	2 cut(s)	395, 602
AoxI	GGCC	4 cut(s)	166, 268, 292, 1035
ApeKI	GCWGC	2 cut(s)	959, 965
ApoI	RAATTY	5 cut(s)	418, 707, 830, 837, 857
ArsI	GACNNNNNNTTYG	2 cut(s)	500, 532
AspLEI	GCGC	2 cut(s)	76, 260
AspS9I	GGNCC	5 cut(s)	143, 269, 337, 661, 1118
AsuC2I	CCSGG	2 cut(s)	55, 147
AsuHPI	GGTGA	3 cut(s)	93, 164, 427
AvaII	GGWCC	4 cut(s)	143, 337, 661, 1118
AxyI	CCTNAGG	1 cut(s)	665
BaeGI	GKGCMC	1 cut(s)	60
BamHI	GGATCC	1 cut(s)	473
BanII	GRGCYC	1 cut(s)	210
Bbv12I	GWGCWC	1 cut(s)	210
BbvI	GCAGC	2 cut(s)	946, 952
BccI	CCATC	3 cut(s)	464, 737, 971
BceAI	ACGGC	1 cut(s)	297
BcgI	CGANNNNNNTGC	2 cut(s)	112, 146
BciT130I	CCWGG	1 cut(s)	783
BclI	TGATCA	1 cut(s)	450
BcnI	CCSGG	2 cut(s)	55, 147
BcoDI	GTCTC	2 cut(s)	166, 604
BfaI	CTAG	1 cut(s)	230
BfoI	RGCGCY	1 cut(s)	261
BglII	AGATCT	1 cut(s)	1101
BisI	GCNGC	6 cut(s)	138, 268, 285, 960, 963, 966
BlsI	GCNGC	6 cut(s)	139, 269, 286, 961, 964, 967
BmcAI	AGTACT	1 cut(s)	554
Bme1390I	CCNGG	3 cut(s)	55, 147, 783
Bme18I	GGWCC	4 cut(s)	143, 337, 661, 1118
BmgBI	CACGTC	1 cut(s)	61
BmgT120I	GGNCC	5 cut(s)	143, 269, 337, 661, 1118
BmiI	GGNNCC	5 cut(s)	145, 475, 1011, 1081, 1119
BmrFI	CCNGG	3 cut(s)	55, 147, 783
BmsI	GCATC	2 cut(s)	120, 782
BpuEI	CTTGAG	1 cut(s)	845
BpuMI	CCSGG	2 cut(s)	55, 147
Bsa29I	ATCGAT	1 cut(s)	889
BsaAI	YACGTR	1 cut(s)	637
BsaBI	GATNNNNATC	1 cut(s)	699
BsaHI	GRCGYC	1 cut(s)	107
Bsc4I	CCNNNNNNNGG	2 cut(s)	391, 1127
Bse118I	RCCGGY	2 cut(s)	103, 263
Bse1I	ACTGG	2 cut(s)	374, 1081
Bse21I	CCTNAGG	1 cut(s)	665
Bse8I	GATNNNNATC	1 cut(s)	699
BseBI	CCWGG	1 cut(s)	783
BseCI	ATCGAT	1 cut(s)	889
BseGI	GGATG	3 cut(s)	10, 757, 1042
BseJI	GATNNNNATC	1 cut(s)	699
BseLI	CCNNNNNNNGG	2 cut(s)	391, 1127
BseMII	CTCAG	2 cut(s)	679, 1158
BseNI	ACTGG	2 cut(s)	374, 1081
BseSI	GKGCMC	1 cut(s)	60
BseXI	GCAGC	2 cut(s)	946, 952
Bsh1236I	CGCG	1 cut(s)	74
BshFI	GGCC	4 cut(s)	168, 270, 294, 1037
BshVI	ATCGAT	1 cut(s)	889
BsiHKAI	GWGCWC	1 cut(s)	210
BsiSI	CCGG	5 cut(s)	54, 104, 147, 165, 264
BslFI	GGGAC	2 cut(s)	129, 1131
BslI	CCNNNNNNNGG	2 cut(s)	391, 1127
BsmAI	GTCTC	2 cut(s)	166, 604
BsmFI	GGGAC	2 cut(s)	129, 1131
BsnI	GGCC	4 cut(s)	168, 270, 294, 1037
Bsp1286I	GDGCHC	2 cut(s)	60, 210
BspACI	CCGC	5 cut(s)	72, 138, 267, 284, 962
BspANI	GGCC	4 cut(s)	168, 270, 294, 1037
BspCNI	CTCAG	2 cut(s)	678, 1157
BspDI	ATCGAT	1 cut(s)	889
BspFNI	CGCG	1 cut(s)	74
BspLI	GGNNCC	5 cut(s)	145, 475, 1011, 1081, 1119
BspPI	GGATC	8 cut(s)	40, 317, 465, 468, 481, 894, 1103, 1138
BsrFI	RCCGGY	2 cut(s)	103, 263
BsrI	ACTGG	2 cut(s)	374, 1081
BssAI	RCCGGY	2 cut(s)	103, 263
BssNI	GRCGYC	1 cut(s)	107
Bst2UI	CCWGG	1 cut(s)	783
Bst4CI	ACNGT	3 cut(s)	217, 653, 1084
Bst6I	CTCTTC	1 cut(s)	347
BstACI	GRCGYC	1 cut(s)	107
BstBAI	YACGTR	1 cut(s)	637
BstC8I	GCNNGC	1 cut(s)	135
BstDEI	CTNAG	4 cut(s)	185, 665, 1017, 1144
BstF5I	GGATG	3 cut(s)	10, 757, 1042
BstFNI	CGCG	1 cut(s)	74
BstH2I	RGCGCY	1 cut(s)	261
BstHHI	GCGC	2 cut(s)	76, 260
BstMAI	GTCTC	2 cut(s)	166, 604
BstMWI	GCNNNNNNNGC	4 cut(s)	264, 959, 965, 971
BstNI	CCWGG	1 cut(s)	783
BstSCI	CCNGG	3 cut(s)	53, 145, 781
BstSLI	GKGCMC	1 cut(s)	60
BstSNI	TACGTA	1 cut(s)	637
BstUI	CGCG	1 cut(s)	74
BstV1I	GCAGC	2 cut(s)	946, 952
BstX2I	RGATCY	4 cut(s)	457, 473, 1101, 1130
BstYI	RGATCY	4 cut(s)	457, 473, 1101, 1130
Bsu15I	ATCGAT	1 cut(s)	889
Bsu36I	CCTNAGG	1 cut(s)	665
BsuRI	GGCC	4 cut(s)	168, 270, 294, 1037
BsuTUI	ATCGAT	1 cut(s)	889
BtrI	CACGTC	1 cut(s)	61
BtsCI	GGATG	3 cut(s)	10, 757, 1042
BtsI	GCAGTG	1 cut(s)	694
BtsIMutI	CAGTG	1 cut(s)	694
Cac8I	GCNNGC	1 cut(s)	135
CaiI	CAGNNNCTG	2 cut(s)	395, 602
CfoI	GCGC	2 cut(s)	76, 260
Cfr10I	RCCGGY	2 cut(s)	103, 263
Cfr13I	GGNCC	5 cut(s)	143, 269, 337, 661, 1118
ClaI	ATCGAT	1 cut(s)	889
CseI	GACGC	1 cut(s)	96
Csp6I	GTAC	2 cut(s)	553, 916
CviAII	CATG	3 cut(s)	43, 423, 613
CviQI	GTAC	2 cut(s)	553, 916
DdeI	CTNAG	4 cut(s)	185, 665, 1017, 1144
DrdI	GACNNNNNNGTC	1 cut(s)	89
DseDI	GACNNNNNNGTC	1 cut(s)	89
EaeI	YGGCCR	2 cut(s)	166, 1035
Eam1104I	CTCTTC	1 cut(s)	347
EarI	CTCTTC	1 cut(s)	347
Ecl136II	GAGCTC	1 cut(s)	208
Eco105I	TACGTA	1 cut(s)	637
Eco24I	GRGCYC	1 cut(s)	210
Eco47I	GGWCC	4 cut(s)	143, 337, 661, 1118
Eco53kI	GAGCTC	1 cut(s)	208
Eco57I	CTGAAG	2 cut(s)	417, 975
Eco81I	CCTNAGG	1 cut(s)	665
EcoICRI	GAGCTC	1 cut(s)	208
EcoO109I	RGGNCCY	3 cut(s)	337, 661, 1118
EcoRI	GAATTC	3 cut(s)	418, 837, 857
EcoRII	CCWGG	1 cut(s)	781
EcoT38I	GRGCYC	1 cut(s)	210
FaeI	CATG	3 cut(s)	46, 426, 616
FalI	AAGNNNNNCTT	4 cut(s)	178, 210, 326, 358
FaqI	GGGAC	2 cut(s)	129, 1131
FatI	CATG	3 cut(s)	42, 422, 612
FbaI	TGATCA	1 cut(s)	450
Fnu4HI	GCNGC	6 cut(s)	138, 268, 285, 960, 963, 966
FokI	GGATG	3 cut(s)	17, 764, 1029
FriOI	GRGCYC	1 cut(s)	210
Fsp4HI	GCNGC	6 cut(s)	138, 268, 285, 960, 963, 966
FspBI	CTAG	1 cut(s)	230
GlaI	GCGC	2 cut(s)	75, 259
GluI	GCNGC	6 cut(s)	138, 268, 285, 960, 963, 966
HaeII	RGCGCY	1 cut(s)	261
HaeIII	GGCC	4 cut(s)	168, 270, 294, 1037
HapII	CCGG	5 cut(s)	54, 104, 147, 165, 264
HgaI	GACGC	1 cut(s)	96
HhaI	GCGC	2 cut(s)	76, 260
Hin1I	GRCGYC	1 cut(s)	107
Hin1II	CATG	3 cut(s)	46, 426, 616
Hin6I	GCGC	2 cut(s)	74, 258
HinP1I	GCGC	2 cut(s)	74, 258
HindIII	AAGCTT	1 cut(s)	924
HinfI	GANTC	4 cut(s)	83, 786, 1060, 1142
HpaII	CCGG	5 cut(s)	54, 104, 147, 165, 264
HphI	GGTGA	3 cut(s)	93, 164, 427
Hpy188I	TCNGA	9 cut(s)	224, 318, 386, 391, 450, 807, 1101, 1141, 1147
Hpy188III	TCNNGA	9 cut(s)	127, 346, 467, 934, 998, 1057, 1064, 1116, 1128
Hpy99I	CGWCG	1 cut(s)	242
HpyAV	CCTTC	3 cut(s)	190, 941, 1122
HpyCH4III	ACNGT	3 cut(s)	217, 653, 1084
HpyCH4IV	ACGT	4 cut(s)	36, 60, 90, 636
HpyCH4V	TGCA	1 cut(s)	133
HpyF10VI	GCNNNNNNNGC	4 cut(s)	264, 959, 965, 971
HpyF3I	CTNAG	4 cut(s)	185, 665, 1017, 1144
HpySE526I	ACGT	4 cut(s)	36, 60, 90, 636
Hsp92I	GRCGYC	1 cut(s)	107
Hsp92II	CATG	3 cut(s)	46, 426, 616
HspAI	GCGC	2 cut(s)	74, 258
Ksp22I	TGATCA	1 cut(s)	450
LmnI	GCTCC	2 cut(s)	527, 1009
Lsp1109I	GCAGC	2 cut(s)	946, 952
LweI	GCATC	2 cut(s)	120, 782
MaeI	CTAG	1 cut(s)	230
MaeII	ACGT	4 cut(s)	36, 60, 90, 636
MaeIII	GTNAC	3 cut(s)	478, 797, 871
MfeI	CAATTG	1 cut(s)	198
MflI	RGATCY	4 cut(s)	457, 473, 1101, 1130
MhlI	GDGCHC	2 cut(s)	60, 210
MluCI	AATT	7 cut(s)	198, 418, 707, 830, 837, 857, 1135
MlyI	GAGTC	2 cut(s)	77, 1136
MmeI	TCCRAC	2 cut(s)	341, 830
MnlI	CCTC	9 cut(s)	143, 185, 244, 350, 385, 406, 674, 677, 1023
MseI	TTAA	3 cut(s)	357, 849, 1156
MspA1I	CMGCKG	1 cut(s)	140
MspI	CCGG	5 cut(s)	54, 104, 147, 165, 264
MspR9I	CCNGG	3 cut(s)	55, 147, 783
MunI	CAATTG	1 cut(s)	198
MvaI	CCWGG	1 cut(s)	783
MvnI	CGCG	1 cut(s)	74
MwoI	GCNNNNNNNGC	4 cut(s)	264, 959, 965, 971
NciI	CCSGG	2 cut(s)	55, 147
NlaIII	CATG	3 cut(s)	46, 426, 616
NlaIV	GGNNCC	5 cut(s)	145, 475, 1011, 1081, 1119
NmuCI	GTSAC	2 cut(s)	478, 797
PcsI	WCGNNNNNNNCGW	1 cut(s)	246
PfeI	GAWTC	2 cut(s)	786, 1060
PfoI	TCCNGGA	1 cut(s)	145
PkrI	GCNGC	6 cut(s)	139, 269, 286, 961, 964, 967
PleI	GAGTC	2 cut(s)	77, 1136
PpsI	GAGTC	2 cut(s)	77, 1136
Ppu21I	YACGTR	1 cut(s)	637
PpuMI	RGGWCCY	3 cut(s)	337, 661, 1118
Psp124BI	GAGCTC	1 cut(s)	210
Psp5II	RGGWCCY	3 cut(s)	337, 661, 1118
Psp6I	CCWGG	1 cut(s)	781
PspGI	CCWGG	1 cut(s)	781
PspN4I	GGNNCC	5 cut(s)	145, 475, 1011, 1081, 1119
PspPI	GGNCC	5 cut(s)	143, 269, 337, 661, 1118
PspPPI	RGGWCCY	3 cut(s)	337, 661, 1118
PstNI	CAGNNNCTG	2 cut(s)	395, 602
PsuI	RGATCY	4 cut(s)	457, 473, 1101, 1130
RsaI	GTAC	2 cut(s)	554, 917
RsaNI	GTAC	2 cut(s)	553, 916
SacI	GAGCTC	1 cut(s)	210
SaqAI	TTAA	3 cut(s)	357, 849, 1156
SatI	GCNGC	6 cut(s)	138, 268, 285, 960, 963, 966
Sau96I	GGNCC	5 cut(s)	143, 269, 337, 661, 1118
ScaI	AGTACT	1 cut(s)	554
SchI	GAGTC	2 cut(s)	77, 1136
ScrFI	CCNGG	3 cut(s)	55, 147, 783
SduI	GDGCHC	2 cut(s)	60, 210
SfaNI	GCATC	2 cut(s)	120, 782
SgrAI	CRCCGGYG	2 cut(s)	103, 263
SinI	GGWCC	4 cut(s)	143, 337, 661, 1118
SmlI	CTYRAG	1 cut(s)	824
SmoI	CTYRAG	1 cut(s)	824
SnaBI	TACGTA	1 cut(s)	637
Sse9I	AATT	7 cut(s)	198, 418, 707, 830, 837, 857, 1135
SsiI	CCGC	5 cut(s)	72, 138, 267, 284, 962
SspMI	CTAG	1 cut(s)	230
SstI	GAGCTC	1 cut(s)	210
StyD4I	CCNGG	3 cut(s)	53, 145, 781
TaaI	ACNGT	3 cut(s)	217, 653, 1084
TaiI	ACGT	4 cut(s)	39, 63, 93, 639
TaqI	TCGA	5 cut(s)	345, 855, 889, 933, 1063
TasI	AATT	7 cut(s)	198, 418, 707, 830, 837, 857, 1135
TatI	WGTACW	1 cut(s)	552
TauI	GCSGC	4 cut(s)	140, 270, 287, 965
TfiI	GAWTC	2 cut(s)	786, 1060
Tru1I	TTAA	3 cut(s)	357, 849, 1156
Tru9I	TTAA	3 cut(s)	357, 849, 1156
TscAI	CASTG	1 cut(s)	694
TseFI	GTSAC	2 cut(s)	478, 797
TseI	GCWGC	2 cut(s)	959, 965
Tsp45I	GTSAC	2 cut(s)	478, 797
TspDTI	ATGAA	5 cut(s)	35, 411, 601, 834, 957
TspGWI	ACGGA	2 cut(s)	226, 466
TspRI	CASTG	1 cut(s)	694
VpaK11BI	GGWCC	4 cut(s)	143, 337, 661, 1118
XapI	RAATTY	5 cut(s)	418, 707, 830, 837, 857
XspI	CTAG	1 cut(s)	230
ZrmI	AGTACT	1 cut(s)	554

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.