Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002697

Physical Location & Seq

Genomic Coordinates Reverse (-)

11228825 .. 11230598

Gene Structure 1774 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G26390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1170 bp

ATGGAGTTAGGAAAATCAATTGAGAACCAAAACAACGTCGTGGCAAGACTAGCAAAGAAAGTCATTGAAACAGATGTCGCCAATGGCTCCAATGTTGTCTTTTCACCGATGTCAATCAACGTTTTGCTCAGCCTCATCGCCGCTGGTTCTAATCCCGTCACCAAAGAAGAAATCCTCTCATTCCTCATGTCACCGTCTACGGATCACCTTAACGCGGTCTTGGCCAAGATCGCGGACGGCGGCACCGAGAGAAGTGATTTGTGCTTATCTACGGCTCACGGTGTCTGGATCGACAAGTCTTCTTATTTGAAGCCTTCCTTTAAAGAGCTTTTGGAGAATTCCTACAAGGCTTCTTGTAGTCAAGTTGACTTCGCAACCAAGCCTGTTGAAGTGATTGATGAGGTAAATATATGGGCTGACGTCCACACAAATGGACTCATCAAGCAGATTCTTTCACGCGATTGTACCGATACTATCAAGGAGATCCGTAATAGCACACTTATTCTAGCAAATGCAGTGTACTTCAAAGCAGCATGGAGTAGAAAATTTGATGCAAAACTAACAAAAGATAACGATTTTCATCTTCTTGACGGTAACACGGTAAAAGTCCCCTTCATGATGAGTTATAAGGACCAATATCTAAGAGGCTATGATGGTTTCCAAGTTTTGCGCCTACCTTATGTAGAGGATAAACGTCATTTCTCCATGTACATTTATCTTCCTAATGACAAAGACGGACTAGCTGCTCTGCTTGAGAAAATAAGCACTGAACCAGGATTTCTTGATAGCCATATTCCACTTCACCGTACACCAGTCGATGCTTTGAGAATTCCGAAGTTGAACTTCTCTTTTGAGTTTAAAGCTTCAGAAGTTTTGAAAGACATGGGGCTTACTTCTCCATTTACTTCCAAAGGTAATTTAACTGAGATGGTTGATTCGCCTTCGAACGGTGATAAACTGCACGTCTCAAGCATTATTCATAAAGCTTGCATTGAGGTGGATGAAGAGGGAACCGAAGCTGCAGCGGTCTCTGTTGCCATCATGATGCCCCAATGTTTGATGCGGAACCCGGATTTTGTAGCTGACCATCCATTTCTGTTCACTGTGAGAGAAGACAATAGTGGAGTAATTTTGTTCATTGGTCAAGTTCTTGATCCTTCTAAACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0004857 GO:0004866 GO:0004867 GO:0004869 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010466 GO:0010605 GO:0010951 GO:0019222 GO:0030162 GO:0030234 GO:0030414 GO:0031323 GO:0031324 GO:0032268 GO:0032269 GO:0033554 GO:0034641 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045861 GO:0046483 GO:0048046 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0061134 GO:0061135 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0090304 GO:0098772 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00190 ko01100 ko05146 map00190 map01100 map05146

Pfam Domains

Protein Families

Serpin

Protein Analysis

389

Amino Acids

43.22

Weight (kDa)

5.5

Isoelectric Point (pI)

39.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Serpin	PF00079	9 - 386	4.6e-91	Serpin (serine protease inhibitor)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002697)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47710 AT1G47710 AT1G51330 AT1G62160 AT1G62170 AT1G62170 AT1G63280 AT1G64010 AT1G64010 AT1G64030 AT2G14540 AT2G25240 AT2G26390 AT2G35580 AT3G45220
fragaria_vesca	FvH4_2g40700
malus_domestica	MD08G1040600.v1.1 MD08G1041200.v1.1 MD08G1041300.v1.1 MD08G1041500.v1.1 MD08G1041600.v1.1 MD14G1097300.v1.1 MD15G1035000.v1.1 MD15G1286900.v1.1
prunus_persica	Prupe.1G389200_v2.0.a1 Prupe.1G389300_v2.0.a1 Prupe.3G141200_v2.0.a1
pyrus_communis	pycom08g03320 pycom08g03330 pycom08g03340 pycom08g03360 pycom15g03220
rosa_chinensis	RchiOBHm_Chr6g0299901
rosa_laevigata	RLG00000011377
rosa_multiflora	Rmu_ssc0000158.1_g000016
rosa_roxburghii	Rroxscaffold_7G00168290
rosa_rugosa	Rorug06G0293100
rosa_samantha	Rh4AG219100
rosa_wichuraiana	Rw6G035390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	627
AatII	GACGTC	1 cut(s)	423
AccB1I	GGYRCC	1 cut(s)	242
AccI	GTMKAC	1 cut(s)	197
AccII	CGCG	3 cut(s)	215, 233, 459
AciI	CCGC	6 cut(s)	141, 215, 233, 240, 1025, 1063
AclI	AACGTT	1 cut(s)	120
AclWI	GGATC	4 cut(s)	210, 296, 478, 1148
AcoI	YGGCCR	1 cut(s)	222
AcsI	RAATTY	3 cut(s)	337, 545, 828
AcuI	CTGAAG	1 cut(s)	849
AcyI	GRCGYC	1 cut(s)	420
AfaI	GTAC	4 cut(s)	466, 521, 710, 808
AfiI	CCNNNNNNNGG	2 cut(s)	214, 947
AgsI	TTSAA	6 cut(s)	68, 310, 389, 526, 841, 877
AjiI	CACGTC	1 cut(s)	964
AjnI	CCWGG	1 cut(s)	772
AluBI	AGCT	6 cut(s)	328, 743, 863, 986, 1019, 1082
AluI	AGCT	6 cut(s)	328, 743, 863, 986, 1019, 1082
Alw26I	GTCTC	2 cut(s)	970, 1033
AlwI	GGATC	4 cut(s)	210, 296, 478, 1148
AoxI	GGCC	1 cut(s)	222
ApeKI	GCWGC	4 cut(s)	530, 743, 1019, 1022
ApoI	RAATTY	3 cut(s)	337, 545, 828
AspLEI	GCGC	1 cut(s)	672
AspS9I	GGNCC	1 cut(s)	631
AsuC2I	CCSGG	1 cut(s)	1070
AsuHPI	GGTGA	6 cut(s)	96, 151, 183, 197, 794, 962
AsuII	TTCGAA	1 cut(s)	944
AvaII	GGWCC	1 cut(s)	631
BalI	TGGCCA	1 cut(s)	224
BanI	GGYRCC	1 cut(s)	242
BbsI	GAAGAC	2 cut(s)	291, 1119
BbvI	GCAGC	4 cut(s)	542, 730, 1006, 1034
BccI	CCATC	4 cut(s)	647, 922, 1046, 1095
BceAI	ACGGC	2 cut(s)	253, 288
BciT130I	CCWGG	1 cut(s)	774
BcnI	CCSGG	1 cut(s)	1070
BcoDI	GTCTC	2 cut(s)	970, 1033
BfaI	CTAG	3 cut(s)	50, 506, 740
BfmI	CTRYAG	1 cut(s)	1020
BisI	GCNGC	6 cut(s)	141, 241, 531, 744, 1020, 1023
BlpI	GCTNAGC	1 cut(s)	128
BlsI	GCNGC	6 cut(s)	142, 242, 532, 745, 1021, 1024
Bme1390I	CCNGG	2 cut(s)	774, 1070
Bme18I	GGWCC	1 cut(s)	631
BmgBI	CACGTC	1 cut(s)	964
BmgT120I	GGNCC	1 cut(s)	631
BmiI	GGNNCC	4 cut(s)	88, 244, 1012, 1067
BmrFI	CCNGG	2 cut(s)	774, 1070
BmsI	GCATC	4 cut(s)	541, 808, 1035, 1050
BpiI	GAAGAC	2 cut(s)	291, 1119
Bpu1102I	GCTNAGC	1 cut(s)	128
Bpu14I	TTCGAA	1 cut(s)	944
BpuEI	CTTGAG	2 cut(s)	773, 952
BpuMI	CCSGG	1 cut(s)	1070
BsaBI	GATNNNNATC	2 cut(s)	113, 579
BsaHI	GRCGYC	1 cut(s)	420
BsaI	GGTCTC	1 cut(s)	1033
Bsc4I	CCNNNNNNNGG	2 cut(s)	214, 947
Bse1I	ACTGG	1 cut(s)	812
Bse8I	GATNNNNATC	2 cut(s)	113, 579
BseBI	CCWGG	1 cut(s)	774
BseGI	GGATG	2 cut(s)	1006, 1087
BseJI	GATNNNNATC	2 cut(s)	113, 579
BseLI	CCNNNNNNNGG	2 cut(s)	214, 947
BseMII	CTCAG	2 cut(s)	142, 915
BseNI	ACTGG	1 cut(s)	812
BseXI	GCAGC	4 cut(s)	542, 730, 1006, 1034
BsgI	GTGCAG	1 cut(s)	944
Bsh1236I	CGCG	3 cut(s)	215, 233, 459
BshFI	GGCC	1 cut(s)	224
BshNI	GGYRCC	1 cut(s)	242
BsiSI	CCGG	1 cut(s)	1070
BslFI	GGGAC	1 cut(s)	593
BslI	CCNNNNNNNGG	2 cut(s)	214, 947
BsmAI	GTCTC	2 cut(s)	970, 1033
BsmBI	CGTCTC	1 cut(s)	970
BsmFI	GGGAC	1 cut(s)	593
BsnI	GGCC	1 cut(s)	224
Bso31I	GGTCTC	1 cut(s)	1033
Bsp119I	TTCGAA	1 cut(s)	944
Bsp1407I	TGTACA	1 cut(s)	708
Bsp143I	GATC	5 cut(s)	202, 228, 288, 483, 1153
Bsp1720I	GCTNAGC	1 cut(s)	128
BspACI	CCGC	6 cut(s)	141, 215, 233, 240, 1025, 1063
BspANI	GGCC	1 cut(s)	224
BspCNI	CTCAG	2 cut(s)	141, 916
BspFNI	CGCG	3 cut(s)	215, 233, 459
BspHI	TCATGA	2 cut(s)	615, 1041
BspLI	GGNNCC	4 cut(s)	88, 244, 1012, 1067
BspMAI	CTGCAG	1 cut(s)	1024
BspPI	GGATC	4 cut(s)	210, 296, 478, 1148
BspT104I	TTCGAA	1 cut(s)	944
BspT107I	GGYRCC	1 cut(s)	242
BspTNI	GGTCTC	1 cut(s)	1033
BsrGI	TGTACA	1 cut(s)	708
BsrI	ACTGG	1 cut(s)	812
BssMI	GATC	5 cut(s)	202, 228, 288, 483, 1153
BssNI	GRCGYC	1 cut(s)	420
Bst2UI	CCWGG	1 cut(s)	774
Bst4CI	ACNGT	7 cut(s)	195, 281, 593, 601, 806, 950, 1105
Bst6I	CTCTTC	1 cut(s)	999
BstACI	GRCGYC	1 cut(s)	420
BstAUI	TGTACA	1 cut(s)	708
BstBI	TTCGAA	1 cut(s)	944
BstC8I	GCNNGC	1 cut(s)	988
BstDEI	CTNAG	3 cut(s)	128, 641, 924
BstF5I	GGATG	2 cut(s)	1006, 1087
BstFNI	CGCG	3 cut(s)	215, 233, 459
BstHHI	GCGC	1 cut(s)	672
BstKTI	GATC	5 cut(s)	205, 231, 291, 486, 1156
BstMAI	GTCTC	2 cut(s)	970, 1033
BstMBI	GATC	5 cut(s)	202, 228, 288, 483, 1153
BstMWI	GCNNNNNNNGC	3 cut(s)	50, 221, 230
BstNI	CCWGG	1 cut(s)	774
BstSCI	CCNGG	2 cut(s)	772, 1068
BstSFI	CTRYAG	1 cut(s)	1020
BstUI	CGCG	3 cut(s)	215, 233, 459
BstV1I	GCAGC	4 cut(s)	542, 730, 1006, 1034
BstV2I	GAAGAC	2 cut(s)	291, 1119
BstX2I	RGATCY	1 cut(s)	483
BstXI	CCANNNNNNTGG	1 cut(s)	431
BstYI	RGATCY	1 cut(s)	483
BsuRI	GGCC	1 cut(s)	224
BtgZI	GCGATG	1 cut(s)	121
BtrI	CACGTC	1 cut(s)	964
BtsCI	GGATG	2 cut(s)	1006, 1087
BtsI	GCAGTG	1 cut(s)	522
BtsIMutI	CAGTG	3 cut(s)	522, 765, 1101
Cac8I	GCNNGC	1 cut(s)	988
CciI	TCATGA	2 cut(s)	615, 1041
CfoI	GCGC	1 cut(s)	672
Cfr13I	GGNCC	1 cut(s)	631
Csp6I	GTAC	4 cut(s)	465, 520, 709, 807
CviAII	CATG	6 cut(s)	187, 534, 616, 706, 883, 1042
CviQI	GTAC	4 cut(s)	465, 520, 709, 807
DdeI	CTNAG	3 cut(s)	128, 641, 924
DpnI	GATC	5 cut(s)	204, 230, 290, 485, 1155
DpnII	GATC	5 cut(s)	202, 228, 288, 483, 1153
DraI	TTTAAA	2 cut(s)	322, 859
EaeI	YGGCCR	1 cut(s)	222
Eam1104I	CTCTTC	1 cut(s)	999
EarI	CTCTTC	1 cut(s)	999
Eco31I	GGTCTC	1 cut(s)	1033
Eco47I	GGWCC	1 cut(s)	631
Eco57I	CTGAAG	1 cut(s)	849
EcoRI	GAATTC	2 cut(s)	337, 828
EcoRII	CCWGG	1 cut(s)	772
Esp3I	CGTCTC	1 cut(s)	970
FaeI	CATG	6 cut(s)	190, 537, 619, 709, 886, 1045
FalI	AAGNNNNNCTT	4 cut(s)	302, 334, 827, 859
FaqI	GGGAC	1 cut(s)	593
FatI	CATG	6 cut(s)	186, 533, 615, 705, 882, 1041
FblI	GTMKAC	1 cut(s)	197
Fnu4HI	GCNGC	6 cut(s)	141, 241, 531, 744, 1020, 1023
FokI	GGATG	2 cut(s)	1013, 1074
Fsp4HI	GCNGC	6 cut(s)	141, 241, 531, 744, 1020, 1023
FspBI	CTAG	3 cut(s)	50, 506, 740
GlaI	GCGC	1 cut(s)	671
GluI	GCNGC	6 cut(s)	141, 241, 531, 744, 1020, 1023
HaeIII	GGCC	1 cut(s)	224
HapII	CCGG	1 cut(s)	1070
HhaI	GCGC	1 cut(s)	672
Hin1I	GRCGYC	1 cut(s)	420
Hin1II	CATG	6 cut(s)	190, 537, 619, 709, 886, 1045
Hin6I	GCGC	1 cut(s)	670
HinP1I	GCGC	1 cut(s)	670
HincII	GTYRAC	1 cut(s)	367
HindII	GTYRAC	1 cut(s)	367
HindIII	AAGCTT	2 cut(s)	861, 984
HinfI	GANTC	3 cut(s)	435, 448, 935
HpaII	CCGG	1 cut(s)	1070
HphI	GGTGA	6 cut(s)	96, 151, 183, 197, 794, 962
Hpy166II	GTNNAC	6 cut(s)	198, 367, 424, 520, 809, 1101
Hpy188I	TCNGA	2 cut(s)	834, 868
Hpy188III	TCNNGA	6 cut(s)	286, 587, 616, 782, 1042, 1151
Hpy8I	GTNNAC	6 cut(s)	198, 367, 424, 520, 809, 1101
Hpy99I	CGWCG	1 cut(s)	41
HpyAV	CCTTC	4 cut(s)	324, 622, 951, 1167
HpyCH4III	ACNGT	7 cut(s)	195, 281, 593, 601, 806, 950, 1105
HpyCH4IV	ACGT	5 cut(s)	36, 120, 420, 694, 963
HpyCH4V	TGCA	5 cut(s)	515, 554, 961, 990, 1022
HpyF10VI	GCNNNNNNNGC	3 cut(s)	50, 221, 230
HpyF3I	CTNAG	3 cut(s)	128, 641, 924
HpySE526I	ACGT	5 cut(s)	36, 120, 420, 694, 963
Hsp92I	GRCGYC	1 cut(s)	420
Hsp92II	CATG	6 cut(s)	190, 537, 619, 709, 886, 1045
HspAI	GCGC	1 cut(s)	670
Kzo9I	GATC	5 cut(s)	202, 228, 288, 483, 1153
LmnI	GCTCC	1 cut(s)	92
LpnPI	CCDG	7 cut(s)	129, 271, 396, 759, 786, 825, 1083
Lsp1109I	GCAGC	4 cut(s)	542, 730, 1006, 1034
LweI	GCATC	4 cut(s)	541, 808, 1035, 1050
MaeI	CTAG	3 cut(s)	50, 506, 740
MaeII	ACGT	5 cut(s)	36, 120, 420, 694, 963
MaeIII	GTNAC	3 cut(s)	157, 189, 593
MalI	GATC	5 cut(s)	204, 230, 290, 485, 1155
MboI	GATC	5 cut(s)	202, 228, 288, 483, 1153
MboII	GAAGA	6 cut(s)	179, 291, 575, 710, 1016, 1124
MfeI	CAATTG	1 cut(s)	18
MflI	RGATCY	1 cut(s)	483
MlsI	TGGCCA	1 cut(s)	224
MluCI	AATT	6 cut(s)	18, 337, 545, 828, 916, 1128
MluNI	TGGCCA	1 cut(s)	224
MlyI	GAGTC	1 cut(s)	429
MnlI	CCTC	8 cut(s)	143, 185, 194, 394, 638, 679, 988, 1000
Mox20I	TGGCCA	1 cut(s)	224
MscI	TGGCCA	1 cut(s)	224
MseI	TTAA	4 cut(s)	210, 321, 858, 920
MslI	CAYNNNNRTG	3 cut(s)	429, 995, 1043
Msp20I	TGGCCA	1 cut(s)	224
MspA1I	CMGCKG	2 cut(s)	143, 1025
MspI	CCGG	1 cut(s)	1070
MspR9I	CCNGG	2 cut(s)	774, 1070
MunI	CAATTG	1 cut(s)	18
MvaI	CCWGG	1 cut(s)	774
MvnI	CGCG	3 cut(s)	215, 233, 459
MwoI	GCNNNNNNNGC	3 cut(s)	50, 221, 230
NciI	CCSGG	1 cut(s)	1070
NdeII	GATC	5 cut(s)	202, 228, 288, 483, 1153
NlaIII	CATG	6 cut(s)	190, 537, 619, 709, 886, 1045
NlaIV	GGNNCC	4 cut(s)	88, 244, 1012, 1067
NmuCI	GTSAC	2 cut(s)	157, 189
NspV	TTCGAA	1 cut(s)	944
PagI	TCATGA	2 cut(s)	615, 1041
PcsI	WCGNNNNNNNCGW	1 cut(s)	243
PfeI	GAWTC	2 cut(s)	448, 935
PkrI	GCNGC	6 cut(s)	142, 242, 532, 745, 1021, 1024
PleI	GAGTC	1 cut(s)	429
PpsI	GAGTC	1 cut(s)	429
PsiI	TTATAA	1 cut(s)	627
Psp1406I	AACGTT	1 cut(s)	120
Psp6I	CCWGG	1 cut(s)	772
PspGI	CCWGG	1 cut(s)	772
PspN4I	GGNNCC	4 cut(s)	88, 244, 1012, 1067
PspPI	GGNCC	1 cut(s)	631
PstI	CTGCAG	1 cut(s)	1024
PsuI	RGATCY	1 cut(s)	483
RsaI	GTAC	4 cut(s)	466, 521, 710, 808
RsaNI	GTAC	4 cut(s)	465, 520, 709, 807
RseI	CAYNNNNRTG	3 cut(s)	429, 995, 1043
SaqAI	TTAA	4 cut(s)	210, 321, 858, 920
SatI	GCNGC	6 cut(s)	141, 241, 531, 744, 1020, 1023
Sau3AI	GATC	5 cut(s)	202, 228, 288, 483, 1153
Sau96I	GGNCC	1 cut(s)	631
SchI	GAGTC	1 cut(s)	429
ScrFI	CCNGG	2 cut(s)	774, 1070
SfaNI	GCATC	4 cut(s)	541, 808, 1035, 1050
SfcI	CTRYAG	1 cut(s)	1020
SfuI	TTCGAA	1 cut(s)	944
SinI	GGWCC	1 cut(s)	631
SmiMI	CAYNNNNRTG	3 cut(s)	429, 995, 1043
SmlI	CTYRAG	2 cut(s)	752, 967
SmoI	CTYRAG	2 cut(s)	752, 967
Sse9I	AATT	6 cut(s)	18, 337, 545, 828, 916, 1128
SsiI	CCGC	6 cut(s)	141, 215, 233, 240, 1025, 1063
SspMI	CTAG	3 cut(s)	50, 506, 740
StyD4I	CCNGG	2 cut(s)	772, 1068
TaaI	ACNGT	7 cut(s)	195, 281, 593, 601, 806, 950, 1105
TaiI	ACGT	5 cut(s)	39, 123, 423, 697, 966
TaqI	TCGA	3 cut(s)	291, 816, 944
TasI	AATT	6 cut(s)	18, 337, 545, 828, 916, 1128
TatI	WGTACW	2 cut(s)	519, 708
TauI	GCSGC	2 cut(s)	143, 243
TfiI	GAWTC	2 cut(s)	448, 935
Tru1I	TTAA	4 cut(s)	210, 321, 858, 920
Tru9I	TTAA	4 cut(s)	210, 321, 858, 920
TscAI	CASTG	3 cut(s)	522, 772, 1108
TseFI	GTSAC	2 cut(s)	157, 189
TseI	GCWGC	4 cut(s)	530, 743, 1019, 1022
Tsp45I	GTSAC	2 cut(s)	157, 189
TspDTI	ATGAA	5 cut(s)	569, 604, 968, 1017, 1126
TspGWI	ACGGA	3 cut(s)	215, 476, 750
TspRI	CASTG	3 cut(s)	522, 772, 1108
VpaK11BI	GGWCC	1 cut(s)	631
XapI	RAATTY	3 cut(s)	337, 545, 828
XmiI	GTMKAC	1 cut(s)	197
XspI	CTAG	3 cut(s)	50, 506, 740
ZraI	GACGTC	1 cut(s)	421

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.