Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0002697

Physical Location & Seq

Genomic Coordinates Forward (+)

15038433 .. 15039479

Gene Structure 1047 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G141200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 657 bp

ATGCGCACAGCAACAATGGATCTAAGAGAAAGCATCCGCAACCAGAACGACGTCGCTTTGGGACTGACCAAGAAGCTACCTCAGACTAAGGGCAAGGAATCGAACCTGGTCTACTCGCCGCTGTCCATTCACATGGTGCTCAGCCTGATCATCGTCGGGTCGAAAGGCCCCACACAAGACCAGCTGCTCTCCTTCCTCAAGTCTAAGTCCGCGGATCACCTCAACTCCTTCACGGCCGAGCTCATCTCCATCATCTTCTTCGACTGGTCCCTGAGCGGTAGGCCCCGCTTGTCATTTGCGAATGGCATTTGGGTCGACATGCCTCTTCCTCTCAAGCCTTCTTTCAAGCATGTGGTGGACACTGCTTACAAGGCAGCTCCCTTGCTCTTATACTTGTCGTGGTTTTGGTCGCTGGCTTATAGTGAAATAAAAGTCTCCAACTTTATTATTATTATTAGGTATGTGCGGTTATACCCAAAAAACCAAAAATCGGCGGTTTCTGACCCTTTGTTCCGGGCGGTAAACCGCTATGATCGGAAAGTCAACGGTGGTCCGGTTTTTATTACCGAGCCGAAGCGTCTCAGACACGGAAGCAGTATCAAATTTCCCCAAACCGCCGGTTACCGACCGAACCGATATATGTATATTATTTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0004857 GO:0004866 GO:0004867 GO:0004869 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009892 GO:0010466 GO:0010605 GO:0010951 GO:0019222 GO:0030162 GO:0030234 GO:0030414 GO:0031323 GO:0031324 GO:0032268 GO:0032269 GO:0043086 GO:0044092 GO:0044421 GO:0044424 GO:0044464 GO:0045861 GO:0048046 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0052547 GO:0052548 GO:0060255 GO:0061134 GO:0061135 GO:0065007 GO:0065009 GO:0080090 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko05146 map05146

Pfam Domains

Protein Families

Serpin

Protein Analysis

219

Amino Acids

24.95

Weight (kDa)

10.09

Isoelectric Point (pI)

24.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002697)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47710 AT1G47710 AT1G51330 AT1G62160 AT1G62170 AT1G62170 AT1G63280 AT1G64010 AT1G64010 AT1G64030 AT2G14540 AT2G25240 AT2G26390 AT2G35580 AT3G45220
fragaria_vesca	FvH4_2g40700
malus_domestica	MD08G1040600.v1.1 MD08G1041200.v1.1 MD08G1041300.v1.1 MD08G1041500.v1.1 MD08G1041600.v1.1 MD14G1097300.v1.1 MD15G1035000.v1.1 MD15G1286900.v1.1
prunus_persica	Prupe.1G389200_v2.0.a1 Prupe.1G389300_v2.0.a1 Prupe.3G141200_v2.0.a1
pyrus_communis	pycom08g03320 pycom08g03330 pycom08g03340 pycom08g03360 pycom15g03220
rosa_chinensis	RchiOBHm_Chr6g0299901
rosa_laevigata	RLG00000011377
rosa_multiflora	Rmu_ssc0000158.1_g000016
rosa_roxburghii	Rroxscaffold_7G00168290
rosa_rugosa	Rorug06G0293100
rosa_samantha	Rh4AG219100
rosa_wichuraiana	Rw6G035390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	54
Acc16I	TGCGCA	1 cut(s)	5
AccBSI	CCGCTC	1 cut(s)	276
AccI	GTMKAC	2 cut(s)	111, 315
AccII	CGCG	1 cut(s)	212
AclWI	GGATC	2 cut(s)	27, 222
AcoI	YGGCCR	1 cut(s)	234
AcsI	RAATTY	1 cut(s)	602
AcyI	GRCGYC	1 cut(s)	51
AdeI	CACNNNGTG	1 cut(s)	136
AfiI	CCNNNNNNNGG	1 cut(s)	490
AgsI	TTSAA	1 cut(s)	346
AjnI	CCWGG	1 cut(s)	105
AluBI	AGCT	4 cut(s)	76, 184, 241, 377
AluI	AGCT	4 cut(s)	76, 184, 241, 377
Alw21I	GWGCWC	2 cut(s)	141, 243
Alw26I	GTCTC	2 cut(s)	439, 584
AlwI	GGATC	2 cut(s)	27, 222
AoxI	GGCC	3 cut(s)	166, 234, 281
ApeKI	GCWGC	2 cut(s)	184, 374
ApoI	RAATTY	1 cut(s)	602
AspLEI	GCGC	1 cut(s)	6
AspS9I	GGNCC	4 cut(s)	167, 267, 282, 551
AsuC2I	CCSGG	1 cut(s)	515
AsuHPI	GGTGA	1 cut(s)	209
AvaII	GGWCC	2 cut(s)	267, 551
BanII	GRGCYC	1 cut(s)	243
Bbv12I	GWGCWC	2 cut(s)	141, 243
BbvI	GCAGC	2 cut(s)	171, 386
BccI	CCATC	1 cut(s)	257
BceAI	ACGGC	1 cut(s)	249
BcgI	CGANNNNNNTGC	2 cut(s)	295, 329
BciT130I	CCWGG	1 cut(s)	107
BclI	TGATCA	1 cut(s)	147
BcnI	CCSGG	1 cut(s)	515
BcoDI	GTCTC	2 cut(s)	439, 584
BisI	GCNGC	3 cut(s)	119, 185, 375
BlpI	GCTNAGC	1 cut(s)	140
BlsI	GCNGC	3 cut(s)	120, 186, 376
Bme1390I	CCNGG	2 cut(s)	107, 515
Bme18I	GGWCC	2 cut(s)	267, 551
BmgT120I	GGNCC	4 cut(s)	167, 267, 282, 551
BmiI	GGNNCC	3 cut(s)	169, 269, 284
BmrFI	CCNGG	2 cut(s)	107, 515
BmsI	GCATC	1 cut(s)	42
BplI	GAGNNNNNCTC	2 cut(s)	230, 262
Bpu10I	CCTNAGC	1 cut(s)	272
Bpu1102I	GCTNAGC	1 cut(s)	140
BpuEI	CTTGAG	2 cut(s)	182, 317
BpuMI	CCSGG	1 cut(s)	515
BsaHI	GRCGYC	1 cut(s)	51
BsaJI	CCNNGG	1 cut(s)	210
BsaWI	WCCGGW	1 cut(s)	553
BsaXI	ACNNNNNCTCC	2 cut(s)	209, 239
Bsc4I	CCNNNNNNNGG	1 cut(s)	490
Bse118I	RCCGGY	1 cut(s)	617
Bse1I	ACTGG	1 cut(s)	269
BseBI	CCWGG	1 cut(s)	107
BseDI	CCNNGG	1 cut(s)	210
BseGI	GGATG	1 cut(s)	33
BseLI	CCNNNNNNNGG	1 cut(s)	490
BseMII	CTCAG	4 cut(s)	95, 154, 263, 595
BseNI	ACTGG	1 cut(s)	269
BseX3I	CGGCCG	1 cut(s)	234
BseXI	GCAGC	2 cut(s)	171, 386
Bsh1236I	CGCG	1 cut(s)	212
Bsh1285I	CGRYCG	2 cut(s)	237, 629
BshFI	GGCC	3 cut(s)	168, 236, 283
BsiEI	CGRYCG	2 cut(s)	237, 629
BsiHKAI	GWGCWC	2 cut(s)	141, 243
BsiSI	CCGG	3 cut(s)	514, 554, 618
BslFI	GGGAC	2 cut(s)	75, 253
BslI	CCNNNNNNNGG	1 cut(s)	490
BsmAI	GTCTC	2 cut(s)	439, 584
BsmBI	CGTCTC	1 cut(s)	584
BsmFI	GGGAC	2 cut(s)	75, 253
BsnI	GGCC	3 cut(s)	168, 236, 283
Bsp1286I	GDGCHC	2 cut(s)	141, 243
Bsp143I	GATC	4 cut(s)	19, 147, 214, 532
Bsp1720I	GCTNAGC	1 cut(s)	140
BspANI	GGCC	3 cut(s)	168, 236, 283
BspCNI	CTCAG	4 cut(s)	94, 153, 264, 594
BspFNI	CGCG	1 cut(s)	212
BspLI	GGNNCC	3 cut(s)	169, 269, 284
BspPI	GGATC	2 cut(s)	27, 222
BsrBI	CCGCTC	1 cut(s)	276
BsrFI	RCCGGY	1 cut(s)	617
BsrI	ACTGG	1 cut(s)	269
BssAI	RCCGGY	1 cut(s)	617
BssECI	CCNNGG	1 cut(s)	210
BssMI	GATC	4 cut(s)	19, 147, 214, 532
BssNI	GRCGYC	1 cut(s)	51
Bst2UI	CCWGG	1 cut(s)	107
Bst4CI	ACNGT	1 cut(s)	548
Bst6I	CTCTTC	1 cut(s)	330
BstACI	GRCGYC	1 cut(s)	51
BstC8I	GCNNGC	1 cut(s)	414
BstDEI	CTNAG	7 cut(s)	23, 81, 87, 140, 204, 272, 581
BstDSI	CCRYGG	1 cut(s)	210
BstEII	GGTNACC	1 cut(s)	620
BstF5I	GGATG	1 cut(s)	33
BstFNI	CGCG	1 cut(s)	212
BstHHI	GCGC	1 cut(s)	6
BstKTI	GATC	4 cut(s)	22, 150, 217, 535
BstMAI	GTCTC	2 cut(s)	439, 584
BstMBI	GATC	4 cut(s)	19, 147, 214, 532
BstMCI	CGRYCG	2 cut(s)	237, 629
BstMWI	GCNNNNNNNGC	1 cut(s)	371
BstNI	CCWGG	1 cut(s)	107
BstNSI	RCATGY	2 cut(s)	322, 353
BstPI	GGTNACC	1 cut(s)	620
BstSCI	CCNGG	2 cut(s)	105, 513
BstUI	CGCG	1 cut(s)	212
BstV1I	GCAGC	2 cut(s)	171, 386
BstX2I	RGATCY	1 cut(s)	19
BstXI	CCANNNNNNTGG	1 cut(s)	133
BstYI	RGATCY	1 cut(s)	19
BstZI	CGGCCG	1 cut(s)	234
BsuRI	GGCC	3 cut(s)	168, 236, 283
BtgI	CCRYGG	1 cut(s)	210
BtsCI	GGATG	1 cut(s)	33
BtsI	GCAGTG	1 cut(s)	360
BtsIMutI	CAGTG	1 cut(s)	360
Cac8I	GCNNGC	1 cut(s)	414
CfoI	GCGC	1 cut(s)	6
Cfr10I	RCCGGY	1 cut(s)	617
Cfr13I	GGNCC	4 cut(s)	167, 267, 282, 551
Cfr42I	CCGCGG	1 cut(s)	213
CseI	GACGC	1 cut(s)	566
CsiI	ACCWGGT	1 cut(s)	105
CviAII	CATG	3 cut(s)	133, 319, 350
DdeI	CTNAG	7 cut(s)	23, 81, 87, 140, 204, 272, 581
DpnI	GATC	4 cut(s)	21, 149, 216, 534
DpnII	GATC	4 cut(s)	19, 147, 214, 532
DraIII	CACNNNGTG	1 cut(s)	136
EaeI	YGGCCR	1 cut(s)	234
EagI	CGGCCG	1 cut(s)	234
Eam1104I	CTCTTC	1 cut(s)	330
EarI	CTCTTC	1 cut(s)	330
Ecl136II	GAGCTC	1 cut(s)	241
EclXI	CGGCCG	1 cut(s)	234
Eco24I	GRGCYC	1 cut(s)	243
Eco47I	GGWCC	2 cut(s)	267, 551
Eco52I	CGGCCG	1 cut(s)	234
Eco53kI	GAGCTC	1 cut(s)	241
Eco91I	GGTNACC	1 cut(s)	620
EcoICRI	GAGCTC	1 cut(s)	241
EcoO109I	RGGNCCY	2 cut(s)	167, 282
EcoO65I	GGTNACC	1 cut(s)	620
EcoRII	CCWGG	1 cut(s)	105
EcoT38I	GRGCYC	1 cut(s)	243
Esp3I	CGTCTC	1 cut(s)	584
FaeI	CATG	3 cut(s)	136, 322, 353
FaqI	GGGAC	2 cut(s)	75, 253
FatI	CATG	3 cut(s)	132, 318, 349
FauI	CCCGC	1 cut(s)	293
FbaI	TGATCA	1 cut(s)	147
FblI	GTMKAC	2 cut(s)	111, 315
Fnu4HI	GCNGC	3 cut(s)	119, 185, 375
FokI	GGATG	1 cut(s)	20
FriOI	GRGCYC	1 cut(s)	243
Fsp4HI	GCNGC	3 cut(s)	119, 185, 375
FspAI	RTGCGCAY	1 cut(s)	5
FspI	TGCGCA	1 cut(s)	5
GlaI	GCGC	1 cut(s)	5
GluI	GCNGC	3 cut(s)	119, 185, 375
HaeIII	GGCC	3 cut(s)	168, 236, 283
HapII	CCGG	3 cut(s)	514, 554, 618
HgaI	GACGC	1 cut(s)	566
HhaI	GCGC	1 cut(s)	6
Hin1I	GRCGYC	1 cut(s)	51
Hin1II	CATG	3 cut(s)	136, 322, 353
Hin6I	GCGC	1 cut(s)	4
HinP1I	GCGC	1 cut(s)	4
HincII	GTYRAC	2 cut(s)	316, 544
HindII	GTYRAC	2 cut(s)	316, 544
HinfI	GANTC	1 cut(s)	98
HpaII	CCGG	3 cut(s)	514, 554, 618
HphI	GGTGA	1 cut(s)	209
Hpy166II	GTNNAC	5 cut(s)	112, 316, 358, 523, 544
Hpy188I	TCNGA	4 cut(s)	84, 502, 537, 584
Hpy8I	GTNNAC	5 cut(s)	112, 316, 358, 523, 544
Hpy99I	CGWCG	3 cut(s)	53, 56, 158
HpyAV	CCTTC	3 cut(s)	202, 238, 348
HpyCH4III	ACNGT	1 cut(s)	548
HpyCH4IV	ACGT	1 cut(s)	51
HpyF10VI	GCNNNNNNNGC	1 cut(s)	371
HpyF3I	CTNAG	7 cut(s)	23, 81, 87, 140, 204, 272, 581
HpySE526I	ACGT	1 cut(s)	51
Hsp92I	GRCGYC	1 cut(s)	51
Hsp92II	CATG	3 cut(s)	136, 322, 353
HspAI	GCGC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	147
KspI	CCGCGG	1 cut(s)	213
Kzo9I	GATC	4 cut(s)	19, 147, 214, 532
LmnI	GCTCC	1 cut(s)	382
Lsp1109I	GCAGC	2 cut(s)	171, 386
LweI	GCATC	1 cut(s)	42
MabI	ACCWGGT	1 cut(s)	105
MaeII	ACGT	1 cut(s)	51
MaeIII	GTNAC	1 cut(s)	620
MalI	GATC	4 cut(s)	21, 149, 216, 534
MbiI	CCGCTC	1 cut(s)	276
MboI	GATC	4 cut(s)	19, 147, 214, 532
MboII	GAAGA	3 cut(s)	247, 250, 317
MflI	RGATCY	1 cut(s)	19
MhlI	GDGCHC	2 cut(s)	141, 243
MluCI	AATT	1 cut(s)	602
MmeI	TCCRAC	1 cut(s)	462
MnlI	CCTC	5 cut(s)	90, 206, 230, 333, 339
MseI	TTAA	1 cut(s)	655
MslI	CAYNNNNRTG	1 cut(s)	131
MspA1I	CMGCKG	3 cut(s)	121, 184, 212
MspI	CCGG	3 cut(s)	514, 554, 618
MspR9I	CCNGG	2 cut(s)	107, 515
MvaI	CCWGG	1 cut(s)	107
MvnI	CGCG	1 cut(s)	212
MwoI	GCNNNNNNNGC	1 cut(s)	371
NciI	CCSGG	1 cut(s)	515
NdeII	GATC	4 cut(s)	19, 147, 214, 532
NlaIII	CATG	3 cut(s)	136, 322, 353
NlaIV	GGNNCC	3 cut(s)	169, 269, 284
NmeAIII	GCCGAG	1 cut(s)	262
NsbI	TGCGCA	1 cut(s)	5
NspI	RCATGY	2 cut(s)	322, 353
PfeI	GAWTC	1 cut(s)	98
PkrI	GCNGC	3 cut(s)	120, 186, 376
Psp124BI	GAGCTC	1 cut(s)	243
Psp6I	CCWGG	1 cut(s)	105
PspEI	GGTNACC	1 cut(s)	620
PspGI	CCWGG	1 cut(s)	105
PspN4I	GGNNCC	3 cut(s)	169, 269, 284
PspPI	GGNCC	4 cut(s)	167, 267, 282, 551
PsrI	GAACNNNNNNTAC	2 cut(s)	95, 127
PsuI	RGATCY	1 cut(s)	19
PvuII	CAGCTG	1 cut(s)	184
RseI	CAYNNNNRTG	1 cut(s)	131
SacI	GAGCTC	1 cut(s)	243
SacII	CCGCGG	1 cut(s)	213
SalI	GTCGAC	1 cut(s)	314
SaqAI	TTAA	1 cut(s)	655
SatI	GCNGC	3 cut(s)	119, 185, 375
Sau3AI	GATC	4 cut(s)	19, 147, 214, 532
Sau96I	GGNCC	4 cut(s)	167, 267, 282, 551
ScrFI	CCNGG	2 cut(s)	107, 515
SduI	GDGCHC	2 cut(s)	141, 243
SetI	ASST	9 cut(s)	54, 78, 82, 108, 186, 222, 243, 379, 461
SexAI	ACCWGGT	1 cut(s)	105
SfaNI	GCATC	1 cut(s)	42
Sfr303I	CCGCGG	1 cut(s)	213
SgrBI	CCGCGG	1 cut(s)	213
SinI	GGWCC	2 cut(s)	267, 551
SmiMI	CAYNNNNRTG	1 cut(s)	131
SmlI	CTYRAG	2 cut(s)	197, 332
SmoI	CTYRAG	2 cut(s)	197, 332
Sse9I	AATT	1 cut(s)	602
SstI	GAGCTC	1 cut(s)	243
StyD4I	CCNGG	2 cut(s)	105, 513
TaaI	ACNGT	1 cut(s)	548
TaiI	ACGT	1 cut(s)	54
TaqI	TCGA	4 cut(s)	101, 161, 261, 315
TaqII	GACCGA	1 cut(s)	643
TasI	AATT	1 cut(s)	602
TauI	GCSGC	1 cut(s)	121
TfiI	GAWTC	1 cut(s)	98
Tru1I	TTAA	1 cut(s)	655
Tru9I	TTAA	1 cut(s)	655
TscAI	CASTG	1 cut(s)	367
TseI	GCWGC	2 cut(s)	184, 374
TspGWI	ACGGA	1 cut(s)	603
TspRI	CASTG	1 cut(s)	367
VpaK11BI	GGWCC	2 cut(s)	267, 551
XapI	RAATTY	1 cut(s)	602
XceI	RCATGY	2 cut(s)	322, 353
XmiI	GTMKAC	2 cut(s)	111, 315
ZraI	GACGTC	1 cut(s)	52

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.