Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002697

Physical Location & Seq

Genomic Coordinates Forward (+)

34775511 .. 34776919

Gene Structure 1409 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G389300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 762 bp

ATGGATGATCTAATAAGAGAAAGCATCCGCAACCAGAACGACGTCGCTTTGGGGCTCAACAATAAGCAACTACTTCAGACTGAGGGCAGGGAATCGAACGTGGTCTACACTCCCCGCTGTCCATCCACCGTGATCGCCGCTGGGTCCAAGGGTCCAACCGTCCAACCTAGGACCAGCTGGCAGCTGCTCTCCTTCCTCAAGTCCAAGTCCGCCGATCACCTCAACTCCTTCGCCGCCGAGTTTATCTCCGTCATCTTCTCCGATGGGTTCCCCAGCTGTGGGGGCTTGTCATTTGCAAATGGCATTTGGGTCAACCGGCCTCTCCTTCTCAAGCCTTCTTTCAAGCAGGTGGTGGACACTGCTTACAAGGCCGGTCTCTCCCAAGTCGATTTTCAGACCAATCACAACCAAGCTCATCTTTGCAAATCGTTATACTTCAAAGGAGTTTGGAACGAGAAATTTGATGCATCAACAACAAAAGAGCATGACTTTCACCTTCTCGACGGAAGCACAGTTAATGCGCCCTTCATGACCGGCAAGAAAAAGCAGTTTAACCTGTATGTTTCCAGCACATTCCACAAGTCCTTCATTGAGGTGAATGAGGAAGGCACAGAAGCTGCAGCTGCTTCTGCTATTGTCGATAAATTGCAGTGTATGCCCACTGACTTTGTGGCCGATCATCCATTCCTCTTCCTAATCCGAGAAGAATTCACTGGAACGGTGCTGTTCACCGGTCATGTTCTCAATCCCCTTGCAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0004857 GO:0004866 GO:0004867 GO:0004869 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0008150 GO:0009892 GO:0010466 GO:0010605 GO:0010951 GO:0019222 GO:0030162 GO:0030234 GO:0030414 GO:0031323 GO:0031324 GO:0032268 GO:0032269 GO:0043086 GO:0044092 GO:0044421 GO:0044424 GO:0044464 GO:0045861 GO:0048046 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0052547 GO:0052548 GO:0060255 GO:0061134 GO:0061135 GO:0065007 GO:0065009 GO:0080090 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko05146 map05146

Pfam Domains

Protein Families

Serpin

Protein Analysis

254

Amino Acids

27.98

Weight (kDa)

6.44

Isoelectric Point (pI)

25.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002697)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47710 AT1G47710 AT1G51330 AT1G62160 AT1G62170 AT1G62170 AT1G63280 AT1G64010 AT1G64010 AT1G64030 AT2G14540 AT2G25240 AT2G26390 AT2G35580 AT3G45220
fragaria_vesca	FvH4_2g40700
malus_domestica	MD08G1040600.v1.1 MD08G1041200.v1.1 MD08G1041300.v1.1 MD08G1041500.v1.1 MD08G1041600.v1.1 MD14G1097300.v1.1 MD15G1035000.v1.1 MD15G1286900.v1.1
prunus_persica	Prupe.1G389200_v2.0.a1 Prupe.1G389300_v2.0.a1 Prupe.3G141200_v2.0.a1
pyrus_communis	pycom08g03320 pycom08g03330 pycom08g03340 pycom08g03360 pycom15g03220
rosa_chinensis	RchiOBHm_Chr6g0299901
rosa_laevigata	RLG00000011377
rosa_multiflora	Rmu_ssc0000158.1_g000016
rosa_roxburghii	Rroxscaffold_7G00168290
rosa_rugosa	Rorug06G0293100
rosa_samantha	Rh4AG219100
rosa_wichuraiana	Rw6G035390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	337
AatII	GACGTC	1 cut(s)	45
Acc36I	ACCTGC	1 cut(s)	337
AccI	GTMKAC	1 cut(s)	105
AciI	CCGC	5 cut(s)	28, 115, 138, 210, 234
AcoI	YGGCCR	1 cut(s)	672
AcsI	RAATTY	2 cut(s)	458, 707
AcuI	CTGAAG	1 cut(s)	59
AcyI	GRCGYC	1 cut(s)	42
AfiI	CCNNNNNNNGG	3 cut(s)	278, 279, 755
AgeI	ACCGGT	1 cut(s)	731
AgsI	TTSAA	2 cut(s)	343, 439
AjuI	GAANNNNNNNTTGG	2 cut(s)	375, 407
AluBI	AGCT	6 cut(s)	177, 184, 276, 413, 617, 623
AluI	AGCT	6 cut(s)	177, 184, 276, 413, 617, 623
Alw26I	GTCTC	1 cut(s)	380
AlwNI	CAGNNNCTG	1 cut(s)	617
AoxI	GGCC	3 cut(s)	317, 369, 672
ApeKI	GCWGC	5 cut(s)	181, 184, 617, 620, 623
ApoI	RAATTY	2 cut(s)	458, 707
AsiGI	ACCGGT	1 cut(s)	731
AspA2I	CCTAGG	1 cut(s)	167
AspLEI	GCGC	1 cut(s)	523
AspS9I	GGNCC	3 cut(s)	144, 152, 171
AsuHPI	GGTGA	4 cut(s)	209, 485, 607, 721
AvaII	GGWCC	3 cut(s)	144, 152, 171
AvrII	CCTAGG	1 cut(s)	167
BanII	GRGCYC	1 cut(s)	57
BbvI	GCAGC	5 cut(s)	171, 193, 604, 610, 632
BccI	CCATC	2 cut(s)	130, 257
BcoDI	GTCTC	1 cut(s)	380
BfaI	CTAG	1 cut(s)	168
BfmI	CTRYAG	1 cut(s)	618
BfuAI	ACCTGC	1 cut(s)	337
BisI	GCNGC	7 cut(s)	138, 182, 185, 234, 618, 621, 624
BlnI	CCTAGG	1 cut(s)	167
BlsI	GCNGC	7 cut(s)	139, 183, 186, 235, 619, 622, 625
Bme18I	GGWCC	3 cut(s)	144, 152, 171
BmgT120I	GGNCC	3 cut(s)	144, 152, 171
BmiI	GGNNCC	3 cut(s)	145, 153, 269
BmsI	GCATC	3 cut(s)	33, 454, 476
BplI	GAGNNNNNCTC	2 cut(s)	230, 262
BpuEI	CTTGAG	2 cut(s)	182, 314
BsaHI	GRCGYC	1 cut(s)	42
BsaI	GGTCTC	1 cut(s)	380
BsaJI	CCNNGG	2 cut(s)	147, 167
BsaWI	WCCGGW	1 cut(s)	731
BsaXI	ACNNNNNCTCC	2 cut(s)	209, 239
Bsc4I	CCNNNNNNNGG	3 cut(s)	278, 279, 755
Bse118I	RCCGGY	4 cut(s)	315, 371, 533, 731
Bse1I	ACTGG	1 cut(s)	718
BseDI	CCNNGG	2 cut(s)	147, 167
BseGI	GGATG	4 cut(s)	10, 24, 122, 679
BseLI	CCNNNNNNNGG	3 cut(s)	278, 279, 755
BseMII	CTCAG	1 cut(s)	72
BseNI	ACTGG	1 cut(s)	718
BseXI	GCAGC	5 cut(s)	171, 193, 604, 610, 632
BseYI	CCCAGC	2 cut(s)	140, 272
BshFI	GGCC	3 cut(s)	319, 371, 674
BshTI	ACCGGT	1 cut(s)	731
BsiSI	CCGG	4 cut(s)	316, 372, 534, 732
BslI	CCNNNNNNNGG	3 cut(s)	278, 279, 755
BsmAI	GTCTC	1 cut(s)	380
BsnI	GGCC	3 cut(s)	319, 371, 674
Bso31I	GGTCTC	1 cut(s)	380
Bsp1286I	GDGCHC	1 cut(s)	57
Bsp143I	GATC	4 cut(s)	7, 132, 214, 676
BspACI	CCGC	5 cut(s)	28, 115, 138, 210, 234
BspANI	GGCC	3 cut(s)	319, 371, 674
BspCNI	CTCAG	1 cut(s)	73
BspHI	TCATGA	1 cut(s)	528
BspLI	GGNNCC	3 cut(s)	145, 153, 269
BspMAI	CTGCAG	1 cut(s)	622
BspMI	ACCTGC	1 cut(s)	337
BspTNI	GGTCTC	1 cut(s)	380
BsrFI	RCCGGY	4 cut(s)	315, 371, 533, 731
BsrI	ACTGG	1 cut(s)	718
BssAI	RCCGGY	4 cut(s)	315, 371, 533, 731
BssECI	CCNNGG	2 cut(s)	147, 167
BssMI	GATC	4 cut(s)	7, 132, 214, 676
BssNI	GRCGYC	1 cut(s)	42
BssT1I	CCWWGG	2 cut(s)	147, 167
Bst4CI	ACNGT	4 cut(s)	130, 160, 514, 721
Bst6I	CTCTTC	1 cut(s)	695
BstACI	GRCGYC	1 cut(s)	42
BstAPI	GCANNNNNTGC	1 cut(s)	655
BstC8I	GCNNGC	2 cut(s)	179, 757
BstDEI	CTNAG	1 cut(s)	81
BstF5I	GGATG	4 cut(s)	10, 24, 122, 679
BstHHI	GCGC	1 cut(s)	523
BstKTI	GATC	4 cut(s)	10, 135, 217, 679
BstMAI	GTCTC	1 cut(s)	380
BstMBI	GATC	4 cut(s)	7, 132, 214, 676
BstMWI	GCNNNNNNNGC	5 cut(s)	282, 368, 623, 629, 655
BstSFI	CTRYAG	1 cut(s)	618
BstV1I	GCAGC	5 cut(s)	171, 193, 604, 610, 632
BsuRI	GGCC	3 cut(s)	319, 371, 674
BtsCI	GGATG	4 cut(s)	10, 24, 122, 679
BtsI	GCAGTG	2 cut(s)	357, 656
BtsIMutI	CAGTG	4 cut(s)	357, 656, 660, 711
BveI	ACCTGC	1 cut(s)	337
Cac8I	GCNNGC	2 cut(s)	179, 757
CaiI	CAGNNNCTG	1 cut(s)	617
CciI	TCATGA	1 cut(s)	528
CfoI	GCGC	1 cut(s)	523
Cfr10I	RCCGGY	4 cut(s)	315, 371, 533, 731
Cfr13I	GGNCC	3 cut(s)	144, 152, 171
CspAI	ACCGGT	1 cut(s)	731
CspCI	CAANNNNNGTGG	2 cut(s)	649, 684
CviAII	CATG	3 cut(s)	485, 529, 737
DdeI	CTNAG	1 cut(s)	81
DpnI	GATC	4 cut(s)	9, 134, 216, 678
DpnII	GATC	4 cut(s)	7, 132, 214, 676
EaeI	YGGCCR	1 cut(s)	672
Eam1104I	CTCTTC	1 cut(s)	695
EarI	CTCTTC	1 cut(s)	695
EciI	GGCGGA	1 cut(s)	199
Eco130I	CCWWGG	2 cut(s)	147, 167
Eco24I	GRGCYC	1 cut(s)	57
Eco31I	GGTCTC	1 cut(s)	380
Eco47I	GGWCC	3 cut(s)	144, 152, 171
Eco57I	CTGAAG	1 cut(s)	59
EcoRI	GAATTC	1 cut(s)	707
EcoT14I	CCWWGG	2 cut(s)	147, 167
EcoT22I	ATGCAT	1 cut(s)	469
EcoT38I	GRGCYC	1 cut(s)	57
ErhI	CCWWGG	2 cut(s)	147, 167
FaeI	CATG	3 cut(s)	488, 532, 740
FaiI	YATR	6 cut(s)	433, 486, 530, 561, 656, 738
FalI	AAGNNNNNCTT	2 cut(s)	402, 434
FatI	CATG	3 cut(s)	484, 528, 736
FauI	CCCGC	1 cut(s)	122
FblI	GTMKAC	1 cut(s)	105
Fnu4HI	GCNGC	7 cut(s)	138, 182, 185, 234, 618, 621, 624
FokI	GGATG	4 cut(s)	11, 17, 109, 666
FriOI	GRGCYC	1 cut(s)	57
Fsp4HI	GCNGC	7 cut(s)	138, 182, 185, 234, 618, 621, 624
FspBI	CTAG	1 cut(s)	168
GlaI	GCGC	1 cut(s)	522
GluI	GCNGC	7 cut(s)	138, 182, 185, 234, 618, 621, 624
GsaI	CCCAGC	2 cut(s)	144, 276
HaeIII	GGCC	3 cut(s)	319, 371, 674
HapII	CCGG	4 cut(s)	316, 372, 534, 732
HhaI	GCGC	1 cut(s)	523
Hin1I	GRCGYC	1 cut(s)	42
Hin1II	CATG	3 cut(s)	488, 532, 740
Hin6I	GCGC	1 cut(s)	521
HinP1I	GCGC	1 cut(s)	521
HincII	GTYRAC	1 cut(s)	313
HindII	GTYRAC	1 cut(s)	313
HinfI	GANTC	1 cut(s)	92
HpaII	CCGG	4 cut(s)	316, 372, 534, 732
HphI	GGTGA	4 cut(s)	209, 485, 607, 721
Hpy166II	GTNNAC	4 cut(s)	106, 313, 355, 729
Hpy188I	TCNGA	4 cut(s)	78, 262, 396, 701
Hpy188III	TCNNGA	2 cut(s)	500, 529
Hpy8I	GTNNAC	4 cut(s)	106, 313, 355, 729
Hpy99I	CGWCG	3 cut(s)	44, 47, 506
HpyAV	CCTTC	8 cut(s)	202, 238, 335, 345, 506, 535, 595, 599
HpyCH4III	ACNGT	4 cut(s)	130, 160, 514, 721
HpyCH4IV	ACGT	2 cut(s)	42, 99
HpyCH4V	TGCA	6 cut(s)	296, 423, 467, 620, 649, 755
HpyF10VI	GCNNNNNNNGC	5 cut(s)	282, 368, 623, 629, 655
HpyF3I	CTNAG	1 cut(s)	81
HpySE526I	ACGT	2 cut(s)	42, 99
Hsp92I	GRCGYC	1 cut(s)	42
Hsp92II	CATG	3 cut(s)	488, 532, 740
HspAI	GCGC	1 cut(s)	521
Kzo9I	GATC	4 cut(s)	7, 132, 214, 676
Lsp1109I	GCAGC	5 cut(s)	171, 193, 604, 610, 632
LweI	GCATC	3 cut(s)	33, 454, 476
MaeI	CTAG	1 cut(s)	168
MaeII	ACGT	2 cut(s)	42, 99
MalI	GATC	4 cut(s)	9, 134, 216, 678
MboI	GATC	4 cut(s)	7, 132, 214, 676
MboII	GAAGA	3 cut(s)	247, 682, 716
MhlI	GDGCHC	1 cut(s)	57
MluCI	AATT	3 cut(s)	458, 644, 707
MmeI	TCCRAC	2 cut(s)	179, 187
MnlI	CCTC	7 cut(s)	76, 206, 230, 330, 586, 595, 698
Mph1103I	ATGCAT	1 cut(s)	469
MseI	TTAA	2 cut(s)	516, 552
MslI	CAYNNNNRTG	1 cut(s)	593
MspA1I	CMGCKG	6 cut(s)	117, 140, 177, 184, 276, 623
MspI	CCGG	4 cut(s)	316, 372, 534, 732
MwoI	GCNNNNNNNGC	5 cut(s)	282, 368, 623, 629, 655
NdeII	GATC	4 cut(s)	7, 132, 214, 676
NlaIII	CATG	3 cut(s)	488, 532, 740
NlaIV	GGNNCC	3 cut(s)	145, 153, 269
NmeAIII	GCCGAG	1 cut(s)	262
NsiI	ATGCAT	1 cut(s)	469
PagI	TCATGA	1 cut(s)	528
PaqCI	CACCTGC	1 cut(s)	337
PfeI	GAWTC	1 cut(s)	92
PinAI	ACCGGT	1 cut(s)	731
PkrI	GCNGC	7 cut(s)	139, 183, 186, 235, 619, 622, 625
PspFI	CCCAGC	2 cut(s)	140, 272
PspN4I	GGNNCC	3 cut(s)	145, 153, 269
PspPI	GGNCC	3 cut(s)	144, 152, 171
PsrI	GAACNNNNNNTAC	2 cut(s)	89, 121
PstI	CTGCAG	1 cut(s)	622
PstNI	CAGNNNCTG	1 cut(s)	617
PvuII	CAGCTG	4 cut(s)	177, 184, 276, 623
RseI	CAYNNNNRTG	1 cut(s)	593
SaqAI	TTAA	2 cut(s)	516, 552
SatI	GCNGC	7 cut(s)	138, 182, 185, 234, 618, 621, 624
Sau3AI	GATC	4 cut(s)	7, 132, 214, 676
Sau96I	GGNCC	3 cut(s)	144, 152, 171
SduI	GDGCHC	1 cut(s)	57
SfaNI	GCATC	3 cut(s)	33, 454, 476
SfcI	CTRYAG	1 cut(s)	618
SinI	GGWCC	3 cut(s)	144, 152, 171
SmiMI	CAYNNNNRTG	1 cut(s)	593
SmlI	CTYRAG	2 cut(s)	197, 329
SmoI	CTYRAG	2 cut(s)	197, 329
Sse9I	AATT	3 cut(s)	458, 644, 707
SsiI	CCGC	5 cut(s)	28, 115, 138, 210, 234
SspMI	CTAG	1 cut(s)	168
StyI	CCWWGG	2 cut(s)	147, 167
TaaI	ACNGT	4 cut(s)	130, 160, 514, 721
TaiI	ACGT	2 cut(s)	45, 102
TaqI	TCGA	4 cut(s)	95, 387, 501, 639
TasI	AATT	3 cut(s)	458, 644, 707
TauI	GCSGC	2 cut(s)	140, 236
TfiI	GAWTC	1 cut(s)	92
Tru1I	TTAA	2 cut(s)	516, 552
Tru9I	TTAA	2 cut(s)	516, 552
TscAI	CASTG	4 cut(s)	364, 656, 667, 718
TseI	GCWGC	5 cut(s)	181, 184, 617, 620, 623
TspDTI	ATGAA	2 cut(s)	517, 577
TspGWI	ACGGA	2 cut(s)	238, 519
TspRI	CASTG	4 cut(s)	364, 656, 667, 718
VpaK11BI	GGWCC	3 cut(s)	144, 152, 171
XapI	RAATTY	2 cut(s)	458, 707
XcmI	CCANNNNNNNNNTGG	1 cut(s)	667
XmaJI	CCTAGG	1 cut(s)	167
XmiI	GTMKAC	1 cut(s)	105
XspI	CTAG	1 cut(s)	168
ZraI	GACGTC	1 cut(s)	43
Zsp2I	ATGCAT	1 cut(s)	469

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.