Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002697

Physical Location & Seq

Genomic Coordinates Reverse (-)

6197663 .. 6199406

Gene Structure 1744 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G14540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1224 bp

ATGGATTCAAAAAGAAAGAACCAAGAACTTAGCACATCAGAAACCGCAGATCCCTCTCTCTCAAAGACGAATAAAAAGCAAAAGATTGATATGCAAGAAGCGATGAAGAACCAAAACGAGGTTTCTCTGTTACTTGTGGGGAAAGTAATCTCTGCCGTAGCCAAAAACTCAAACTGTGTCTTCTCTCCGGCATCCATCAACGCCGTTCTCACCGTGACCGCTGCCAACACCGACAACAAAACATTAAGATCTTTCATCCTCTCTTTTCTTAAGTCTTCTTCTACCGAAGAGACCAACGCCATCTTCCACGAACTCGCTTCCGTCGTCTTCAAAGACGGAAGTGAAACAGGCGGGCCCAAAATTGCGGCGGTTAATGGAGTGTGGATGGAGCAATCGCTTTCGTGTAACCCCGACTGGGAAGATCTGTTTCTGAACTTCTTCAAGGCTAGTTTCGCTAAAGTTGATTTCCGACACAAGGCTGAAGAAGTGCGTCTGGACGTAAATACGTGGGCTTCACGTCACACCAATGATCTCATCAAAGAAATTCTTCCTCGTGGATCTGTTACAAGCCTAACTAATTGGATATATGGAAACGCCTTGTACTTCAAGGGAGCTTGGGAAAAGGCATTCGATAAGTCCATGACAAGAGATAAACCATTTCACCTTCTCAATGGCAAATCAGTCTCTGTGCCTTTCATGAGAAGCTATGAGAAACAATTCATAGAGGCTTATGATGGTTTCAAAGTCCTACGCCTTCCTTATCGACAAGGACGTGATGATACCAACCGCGAGTTTTCGATGTATCTCTATCTCCCTGACAAGAAAGGTGAACTGGATAATCTTTTGGAGAGAATAACATCTAATCCTGGATTCTTGGATAGTCATATTCCGGAATACCGCGTTGATGTTGGTGATTTCAGAATTCCAAAATTTAAGATCGAATTCGGGTTTGAAGCTTCAAGTGTTTTTAATGACTTTGAGCTTAATGTGTCATTACACCAGAAAGCTTTGATTGAGATCGATGAAGAAGGTACTGAAGCTGCGGCTGCTACTACTGTTGTAGTAGTAACCGGCAGCTGTTTGTGGGAGCCGAAGAAGAAGATAGATTTTGTGGCAGATCATCCATTTCTCTTTTTGATTAGAGAAGACAAAACCGGAACTCTTTTGTTCGCTGGTCAAATCTTCGATCCTTCTGAACTTTCTTCTGCGTTGGACCGGGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0004857 GO:0004866 GO:0004867 GO:0004869 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010466 GO:0010605 GO:0010951 GO:0019222 GO:0030162 GO:0030234 GO:0030414 GO:0031323 GO:0031324 GO:0032268 GO:0032269 GO:0033554 GO:0034641 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0045861 GO:0046483 GO:0048046 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0061134 GO:0061135 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0090304 GO:0098772 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00190 ko01100 ko05146 map00190 map01100 map05146

Pfam Domains

Protein Families

Serpin

Protein Analysis

407

Amino Acids

45.89

Weight (kDa)

5.67

Isoelectric Point (pI)

29.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Serpin	PF00079	37 - 397	2e-77	Serpin (serine protease inhibitor)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002697)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47710 AT1G47710 AT1G51330 AT1G62160 AT1G62170 AT1G62170 AT1G63280 AT1G64010 AT1G64010 AT1G64030 AT2G14540 AT2G25240 AT2G26390 AT2G35580 AT3G45220
fragaria_vesca	FvH4_2g40700
malus_domestica	MD08G1040600.v1.1 MD08G1041200.v1.1 MD08G1041300.v1.1 MD08G1041500.v1.1 MD08G1041600.v1.1 MD14G1097300.v1.1 MD15G1035000.v1.1 MD15G1286900.v1.1
prunus_persica	Prupe.1G389200_v2.0.a1 Prupe.1G389300_v2.0.a1 Prupe.3G141200_v2.0.a1
pyrus_communis	pycom08g03320 pycom08g03330 pycom08g03340 pycom08g03360 pycom15g03220
rosa_chinensis	RchiOBHm_Chr6g0299901
rosa_laevigata	RLG00000011377
rosa_multiflora	Rmu_ssc0000158.1_g000016
rosa_roxburghii	Rroxscaffold_7G00168290
rosa_rugosa	Rorug06G0293100
rosa_samantha	Rh4AG219100
rosa_wichuraiana	Rw6G035390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	789, 900
AccIII	TCCGGA	1 cut(s)	889
AciI	CCGC	8 cut(s)	45, 219, 351, 365, 368, 787, 898, 1043
AclWI	GGATC	3 cut(s)	44, 565, 1181
AcsI	RAATTY	4 cut(s)	543, 921, 929, 941
AcuI	CTGAAG	2 cut(s)	501, 1056
AfaI	GTAC	2 cut(s)	602, 1033
AfiI	CCNNNNNNNGG	3 cut(s)	118, 415, 475
AflII	CTTAAG	1 cut(s)	269
AgsI	TTSAA	7 cut(s)	9, 331, 442, 607, 742, 953, 960
AjiI	CACGTC	2 cut(s)	518, 773
AjnI	CCWGG	1 cut(s)	865
AjuI	GAANNNNNNNTTGG	2 cut(s)	287, 319
AluBI	AGCT	7 cut(s)	614, 705, 956, 982, 1007, 1040, 1077
AluI	AGCT	7 cut(s)	614, 705, 956, 982, 1007, 1040, 1077
Alw26I	GTCTC	2 cut(s)	284, 688
AlwI	GGATC	3 cut(s)	44, 565, 1181
AlwNI	CAGNNNCTG	1 cut(s)	686
Aor13HI	TCCGGA	1 cut(s)	889
AoxI	GGCC	1 cut(s)	353
ApaI	GGGCCC	1 cut(s)	357
ApeKI	GCWGC	4 cut(s)	221, 1040, 1046, 1074
ApoI	RAATTY	4 cut(s)	543, 921, 929, 941
Asp700I	GAANNNNTTC	3 cut(s)	437, 546, 716
AspS9I	GGNCC	3 cut(s)	353, 354, 1213
AsuC2I	CCSGG	1 cut(s)	1217
AsuHPI	GGTGA	4 cut(s)	202, 653, 839, 923
AvaII	GGWCC	1 cut(s)	1213
BaeGI	GKGCMC	1 cut(s)	357
BanII	GRGCYC	1 cut(s)	357
BauI	CACGAG	1 cut(s)	552
BbsI	GAAGAC	4 cut(s)	172, 267, 319, 1152
BbvI	GCAGC	4 cut(s)	208, 1027, 1033, 1086
BccI	CCATC	4 cut(s)	203, 308, 379, 728
BceAI	ACGGC	2 cut(s)	140, 188
BciT130I	CCWGG	1 cut(s)	867
BcnI	CCSGG	1 cut(s)	1217
BcoDI	GTCTC	2 cut(s)	284, 688
BfaI	CTAG	1 cut(s)	447
BfrI	CTTAAG	1 cut(s)	269
BglII	AGATCT	2 cut(s)	248, 421
BisI	GCNGC	6 cut(s)	222, 366, 1041, 1044, 1047, 1075
BlsI	GCNGC	6 cut(s)	223, 367, 1042, 1045, 1048, 1076
Bme1390I	CCNGG	2 cut(s)	867, 1217
Bme18I	GGWCC	1 cut(s)	1213
BmgBI	CACGTC	2 cut(s)	518, 773
BmgT120I	GGNCC	3 cut(s)	353, 354, 1213
BmiI	GGNNCC	2 cut(s)	355, 1089
BmrFI	CCNGG	2 cut(s)	867, 1217
BmrI	ACTGGG	1 cut(s)	424
BmsI	GCATC	1 cut(s)	200
BmuI	ACTGGG	1 cut(s)	424
BpiI	GAAGAC	4 cut(s)	172, 267, 319, 1152
BpuMI	CCSGG	1 cut(s)	1217
Bsa29I	ATCGAT	1 cut(s)	1020
BsaAI	YACGTR	1 cut(s)	507
BsaBI	GATNNNNATC	1 cut(s)	1016
BsaI	GGTCTC	1 cut(s)	284
BsaWI	WCCGGW	2 cut(s)	889, 1154
Bsc4I	CCNNNNNNNGG	3 cut(s)	118, 415, 475
Bse118I	RCCGGY	1 cut(s)	1070
Bse1I	ACTGG	2 cut(s)	419, 837
Bse8I	GATNNNNATC	1 cut(s)	1016
BseAI	TCCGGA	1 cut(s)	889
BseBI	CCWGG	1 cut(s)	867
BseCI	ATCGAT	1 cut(s)	1020
BseGI	GGATG	4 cut(s)	191, 255, 390, 1120
BseJI	GATNNNNATC	1 cut(s)	1016
BseLI	CCNNNNNNNGG	3 cut(s)	118, 415, 475
BseNI	ACTGG	2 cut(s)	419, 837
BseSI	GKGCMC	1 cut(s)	357
BseXI	GCAGC	4 cut(s)	208, 1027, 1033, 1086
Bsh1236I	CGCG	2 cut(s)	789, 900
BshFI	GGCC	1 cut(s)	355
BshVI	ATCGAT	1 cut(s)	1020
BsiSI	CCGG	5 cut(s)	188, 890, 1071, 1155, 1216
BslI	CCNNNNNNNGG	3 cut(s)	118, 415, 475
BsmAI	GTCTC	2 cut(s)	284, 688
BsmI	GAATGC	1 cut(s)	626
BsnI	GGCC	1 cut(s)	355
Bso31I	GGTCTC	1 cut(s)	284
Bsp120I	GGGCCC	1 cut(s)	353
Bsp1286I	GDGCHC	1 cut(s)	357
Bsp13I	TCCGGA	1 cut(s)	889
Bsp143I	GATC	9 cut(s)	49, 248, 421, 529, 557, 936, 1017, 1117, 1186
BspACI	CCGC	8 cut(s)	45, 219, 351, 365, 368, 787, 898, 1043
BspANI	GGCC	1 cut(s)	355
BspDI	ATCGAT	1 cut(s)	1020
BspEI	TCCGGA	1 cut(s)	889
BspFNI	CGCG	2 cut(s)	789, 900
BspHI	TCATGA	1 cut(s)	696
BspLI	GGNNCC	2 cut(s)	355, 1089
BspPI	GGATC	3 cut(s)	44, 565, 1181
BspTI	CTTAAG	1 cut(s)	269
BspTNI	GGTCTC	1 cut(s)	284
BsrFI	RCCGGY	1 cut(s)	1070
BsrI	ACTGG	2 cut(s)	419, 837
BssAI	RCCGGY	1 cut(s)	1070
BssMI	GATC	9 cut(s)	49, 248, 421, 529, 557, 936, 1017, 1117, 1186
BssSI	CACGAG	1 cut(s)	552
Bst2BI	CACGAG	1 cut(s)	552
Bst2UI	CCWGG	1 cut(s)	867
Bst4CI	ACNGT	3 cut(s)	176, 214, 1057
Bst6I	CTCTTC	1 cut(s)	282
BstAFI	CTTAAG	1 cut(s)	269
BstBAI	YACGTR	1 cut(s)	507
BstC8I	GCNNGC	1 cut(s)	353
BstDEI	CTNAG	1 cut(s)	29
BstF5I	GGATG	4 cut(s)	191, 255, 390, 1120
BstFNI	CGCG	2 cut(s)	789, 900
BstKTI	GATC	9 cut(s)	52, 251, 424, 532, 560, 939, 1020, 1120, 1189
BstMAI	GTCTC	2 cut(s)	284, 688
BstMBI	GATC	9 cut(s)	49, 248, 421, 529, 557, 936, 1017, 1117, 1186
BstMWI	GCNNNNNNNGC	2 cut(s)	452, 1046
BstNI	CCWGG	1 cut(s)	867
BstSCI	CCNGG	2 cut(s)	865, 1215
BstSLI	GKGCMC	1 cut(s)	357
BstUI	CGCG	2 cut(s)	789, 900
BstV1I	GCAGC	4 cut(s)	208, 1027, 1033, 1086
BstV2I	GAAGAC	4 cut(s)	172, 267, 319, 1152
BstX2I	RGATCY	4 cut(s)	49, 248, 421, 557
BstYI	RGATCY	4 cut(s)	49, 248, 421, 557
Bsu15I	ATCGAT	1 cut(s)	1020
BsuRI	GGCC	1 cut(s)	355
BsuTUI	ATCGAT	1 cut(s)	1020
BtgZI	GCGATG	1 cut(s)	116
BtrI	CACGTC	2 cut(s)	518, 773
BtsCI	GGATG	4 cut(s)	191, 255, 390, 1120
Cac8I	GCNNGC	1 cut(s)	353
CaiI	CAGNNNCTG	1 cut(s)	686
CciI	TCATGA	1 cut(s)	696
Cfr10I	RCCGGY	1 cut(s)	1070
Cfr13I	GGNCC	3 cut(s)	353, 354, 1213
ClaI	ATCGAT	1 cut(s)	1020
CseI	GACGC	1 cut(s)	479
Csp6I	GTAC	2 cut(s)	601, 1032
CviAII	CATG	2 cut(s)	640, 697
CviQI	GTAC	2 cut(s)	601, 1032
DdeI	CTNAG	1 cut(s)	29
DpnI	GATC	9 cut(s)	51, 250, 423, 531, 559, 938, 1019, 1119, 1188
DpnII	GATC	9 cut(s)	49, 248, 421, 529, 557, 936, 1017, 1117, 1186
Eam1104I	CTCTTC	1 cut(s)	282
EarI	CTCTTC	1 cut(s)	282
Eco24I	GRGCYC	1 cut(s)	357
Eco31I	GGTCTC	1 cut(s)	284
Eco47I	GGWCC	1 cut(s)	1213
Eco57I	CTGAAG	2 cut(s)	501, 1056
EcoRI	GAATTC	2 cut(s)	921, 941
EcoRII	CCWGG	1 cut(s)	865
EcoT38I	GRGCYC	1 cut(s)	357
FaeI	CATG	2 cut(s)	643, 700
FaiI	YATR	9 cut(s)	92, 586, 588, 641, 698, 708, 722, 732, 885
FalI	AAGNNNNNCTT	2 cut(s)	531, 563
FatI	CATG	2 cut(s)	639, 696
FauI	CCCGC	1 cut(s)	344
Fnu4HI	GCNGC	6 cut(s)	222, 366, 1041, 1044, 1047, 1075
FokI	GGATG	4 cut(s)	178, 242, 397, 1107
FriOI	GRGCYC	1 cut(s)	357
Fsp4HI	GCNGC	6 cut(s)	222, 366, 1041, 1044, 1047, 1075
FspBI	CTAG	1 cut(s)	447
GluI	GCNGC	6 cut(s)	222, 366, 1041, 1044, 1047, 1075
HaeIII	GGCC	1 cut(s)	355
HapII	CCGG	5 cut(s)	188, 890, 1071, 1155, 1216
HgaI	GACGC	1 cut(s)	479
Hin1II	CATG	2 cut(s)	643, 700
HindIII	AAGCTT	2 cut(s)	954, 1005
HinfI	GANTC	2 cut(s)	5, 870
HpaII	CCGG	5 cut(s)	188, 890, 1071, 1155, 1216
HphI	GGTGA	4 cut(s)	202, 653, 839, 923
Hpy166II	GTNNAC	1 cut(s)	830
Hpy188I	TCNGA	5 cut(s)	40, 432, 470, 920, 1195
Hpy188III	TCNNGA	3 cut(s)	494, 697, 890
Hpy8I	GTNNAC	1 cut(s)	830
Hpy99I	CGWCG	1 cut(s)	326
HpyAV	CCTTC	4 cut(s)	674, 764, 1022, 1200
HpyCH4III	ACNGT	3 cut(s)	176, 214, 1057
HpyCH4IV	ACGT	4 cut(s)	498, 506, 517, 772
HpyCH4V	TGCA	1 cut(s)	94
HpyF10VI	GCNNNNNNNGC	2 cut(s)	452, 1046
HpyF3I	CTNAG	1 cut(s)	29
HpySE526I	ACGT	4 cut(s)	498, 506, 517, 772
Hsp92II	CATG	2 cut(s)	643, 700
Kpn2I	TCCGGA	1 cut(s)	889
Kzo9I	GATC	9 cut(s)	49, 248, 421, 529, 557, 936, 1017, 1117, 1186
LmnI	GCTCC	3 cut(s)	388, 611, 1087
Lsp1109I	GCAGC	4 cut(s)	208, 1027, 1033, 1086
LweI	GCATC	1 cut(s)	200
MaeI	CTAG	1 cut(s)	447
MaeII	ACGT	4 cut(s)	498, 506, 517, 772
MaeIII	GTNAC	6 cut(s)	129, 214, 404, 518, 562, 1066
MalI	GATC	9 cut(s)	51, 250, 423, 531, 559, 938, 1019, 1119, 1188
MboI	GATC	9 cut(s)	49, 248, 421, 529, 557, 936, 1017, 1117, 1186
MflI	RGATCY	4 cut(s)	49, 248, 421, 557
MhlI	GDGCHC	1 cut(s)	357
MluCI	AATT	7 cut(s)	360, 543, 577, 716, 921, 929, 941
MmeI	TCCRAC	2 cut(s)	493, 1191
MnlI	CCTC	5 cut(s)	64, 112, 269, 561, 718
MroI	TCCGGA	1 cut(s)	889
MroXI	GAANNNNTTC	3 cut(s)	437, 546, 716
MseI	TTAA	7 cut(s)	245, 270, 372, 933, 969, 984, 1222
MslI	CAYNNNNRTG	1 cut(s)	525
MspA1I	CMGCKG	2 cut(s)	221, 1077
MspCI	CTTAAG	1 cut(s)	269
MspI	CCGG	5 cut(s)	188, 890, 1071, 1155, 1216
MspR9I	CCNGG	2 cut(s)	867, 1217
Mva1269I	GAATGC	1 cut(s)	626
MvaI	CCWGG	1 cut(s)	867
MvnI	CGCG	2 cut(s)	789, 900
MwoI	GCNNNNNNNGC	2 cut(s)	452, 1046
NciI	CCSGG	1 cut(s)	1217
NdeII	GATC	9 cut(s)	49, 248, 421, 529, 557, 936, 1017, 1117, 1186
NlaIII	CATG	2 cut(s)	643, 700
NlaIV	GGNNCC	2 cut(s)	355, 1089
NmuCI	GTSAC	2 cut(s)	214, 518
PagI	TCATGA	1 cut(s)	696
PcsI	WCGNNNNNNNCGW	2 cut(s)	321, 769
PctI	GAATGC	1 cut(s)	626
PdmI	GAANNNNTTC	3 cut(s)	437, 546, 716
PfeI	GAWTC	2 cut(s)	5, 870
PfoI	TCCNGGA	1 cut(s)	865
PkrI	GCNGC	6 cut(s)	223, 367, 1042, 1045, 1048, 1076
Ppu21I	YACGTR	1 cut(s)	507
Psp6I	CCWGG	1 cut(s)	865
PspGI	CCWGG	1 cut(s)	865
PspN4I	GGNNCC	2 cut(s)	355, 1089
PspOMI	GGGCCC	1 cut(s)	353
PspPI	GGNCC	3 cut(s)	353, 354, 1213
PstNI	CAGNNNCTG	1 cut(s)	686
PsuI	RGATCY	4 cut(s)	49, 248, 421, 557
PvuII	CAGCTG	1 cut(s)	1077
RsaI	GTAC	2 cut(s)	602, 1033
RsaNI	GTAC	2 cut(s)	601, 1032
RseI	CAYNNNNRTG	1 cut(s)	525
SaqAI	TTAA	7 cut(s)	245, 270, 372, 933, 969, 984, 1222
SatI	GCNGC	6 cut(s)	222, 366, 1041, 1044, 1047, 1075
Sau3AI	GATC	9 cut(s)	49, 248, 421, 529, 557, 936, 1017, 1117, 1186
Sau96I	GGNCC	3 cut(s)	353, 354, 1213
ScrFI	CCNGG	2 cut(s)	867, 1217
SduI	GDGCHC	1 cut(s)	357
SfaNI	GCATC	1 cut(s)	200
SinI	GGWCC	1 cut(s)	1213
SmiMI	CAYNNNNRTG	1 cut(s)	525
SmlI	CTYRAG	1 cut(s)	269
SmoI	CTYRAG	1 cut(s)	269
Sse9I	AATT	7 cut(s)	360, 543, 577, 716, 921, 929, 941
SsiI	CCGC	8 cut(s)	45, 219, 351, 365, 368, 787, 898, 1043
SspMI	CTAG	1 cut(s)	447
StyD4I	CCNGG	2 cut(s)	865, 1215
TaaI	ACNGT	3 cut(s)	176, 214, 1057
TaiI	ACGT	4 cut(s)	501, 509, 520, 775
TaqI	TCGA	6 cut(s)	630, 763, 797, 939, 1020, 1185
TasI	AATT	7 cut(s)	360, 543, 577, 716, 921, 929, 941
TatI	WGTACW	1 cut(s)	600
TauI	GCSGC	2 cut(s)	368, 1046
TfiI	GAWTC	2 cut(s)	5, 870
Tru1I	TTAA	7 cut(s)	245, 270, 372, 933, 969, 984, 1222
Tru9I	TTAA	7 cut(s)	245, 270, 372, 933, 969, 984, 1222
TseFI	GTSAC	2 cut(s)	214, 518
TseI	GCWGC	4 cut(s)	221, 1040, 1046, 1074
Tsp45I	GTSAC	2 cut(s)	214, 518
TspDTI	ATGAA	5 cut(s)	119, 244, 685, 709, 1038
TspGWI	ACGGA	2 cut(s)	310, 351
Vha464I	CTTAAG	1 cut(s)	269
VpaK11BI	GGWCC	1 cut(s)	1213
XapI	RAATTY	4 cut(s)	543, 921, 929, 941
XmnI	GAANNNNTTC	3 cut(s)	437, 546, 716
XspI	CTAG	1 cut(s)	447

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.