Prupe.1G389200_v2.0.a1

Belongs to the serpin family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
34772624 .. 34775006
2383 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G389200.1

Sequence Viewer

Length: 1164 bp
ATGGATCTAAGAGAAAGCATCCGCAACCAGAACGACGTAGCTTTGGGACTGACCAAGAAGCTACTTCAGACTGAGGGCAAGGAATCGAACCTGGTCTACTCGCCGCTATCCATCCACGTGGTGCTCAGCCTGATCGCGGCCGGGTCGGAGGGCCCCACCCAGGACCAGCTCCTCTACTTCCTCAAGTCCAAGTCCGCCGATCACCTCAACTCCTTCGCCGCCGAGCTCGTCTCCGTCCTCTTCTCCGACGGGTCCCCCAGCGGTGGGCCCCTCTTGTCATTTGCGAATGGCATTTGGGTCGACAGCTCTCTCCCTCTCAAGCCTTCTTTCAAGCAGGTGGTGGACACTGCTTACAAGGCAGCTCTCTCCCAAGTCGATTTTCAGACCAATGCTGCTGAAGTGGCCTCTGGAGTGAATTCATGGGCTGAAAAGGAGACTAGTGGCCTTATCAAGGAGATACTTCCTCCCGGGTCAGTTGACAGCTCAACCAGGCTCATCTTTGCAAATGCATTATACTTCAAAGGAGCTTGGAACGAGGAGTTTGATGCATCAACAACAAAAGAGCATGACTTCCACCTTCTCGACGGGAGCACAGTTAAGGCACCCTTCATGACCAGCAAGAAGAAGCAGTTTGTAAGTTCCTACGATGGTTTCACAGTCTTAGGACTTCCTTACAAACAAGGTGAAGACAAGCGGCGTTTCTCCATGCACGTCTTTCTTCCAGAGGCAAAAGATGGGCTGCCATCTTTGGTTGAGAAGCTCGATTCTGAGTCCGGGTTTTTGGATCGCCATCTTCCCAAGCAACAAGTTGAAGTGGGTGACTTCAGACTCCCAAAGTTTAAGATCTCTTTCGGGTTTGAAGCTTCCAATGTTCTGAAGGGTCTAGGAGTGGTGTTGCCTTTCAGTGGTGGAGGTTTGACAGGGATGGTGGACTCTCCTGTGGGTCAGAACCTATATGTTTCCAGCATATTCCACAAGTCCTTCATTGAAGTGAATGAGGAAGGAACGGAAGCTGCAGCTGCTTCTGCTGGTGTCATAAAATTGAGGGGTCTGCCCATAACCACCGACTTTGTGGCCGATCATCCATTCCTCTTCCTGATCCGAGAAGAATTGACTGGAACGGTCATGTTCATCGGTCATGTTCTAAATCCCCTTGCAGACTGA

Protein Analysis

388

Amino Acids

42.0

Weight (kDa)

5.36

Isoelectric Point (pI)

35.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 325
Acc36I ACCTGC 1 cut(s) 325
AccB1I GGYRCC 1 cut(s) 601
AccI GTMKAC 2 cut(s) 96, 300
AccII CGCG 1 cut(s) 137
AciI CCGC 7 cut(s) 22, 104, 137, 195, 219, 261, 694
AclWI GGATC 3 cut(s) 12, 792, 1093
AcoI YGGCCR 2 cut(s) 138, 1074
AcsI RAATTY 1 cut(s) 415
AcuI CTGAAG 4 cut(s) 50, 417, 808, 896
AcvI CACGTG 1 cut(s) 118
AdeI CACNNNGTG 1 cut(s) 121
AfiI CCNNNNNNNGG 6 cut(s) 136, 160, 263, 264, 451, 905
AgsI TTSAA 5 cut(s) 331, 520, 812, 860, 989
AhlI ACTAGT 1 cut(s) 437
AjiI CACGTC 1 cut(s) 712
AjnI CCWGG 3 cut(s) 90, 159, 488
AjuI GAANNNNNNNTTGG 2 cut(s) 363, 395
Alw21I GWGCWC 3 cut(s) 126, 228, 593
Alw26I GTCTC 2 cut(s) 235, 428
AlwI GGATC 3 cut(s) 12, 792, 1093
Ama87I CYCGRG 1 cut(s) 467
AoxI GGCC 6 cut(s) 138, 151, 266, 402, 442, 1074
ApaI GGGCCC 2 cut(s) 155, 270
ApeKI GCWGC 6 cut(s) 359, 392, 739, 1013, 1016, 1019
ApoI RAATTY 1 cut(s) 415
AspS9I GGNCC 6 cut(s) 151, 152, 163, 252, 266, 267
AsuC2I CCSGG 4 cut(s) 142, 468, 469, 775
AsuHPI GGTGA 3 cut(s) 194, 695, 830
AvaI CYCGRG 1 cut(s) 467
AvaII GGWCC 2 cut(s) 163, 252
BaeGI GKGCMC 2 cut(s) 155, 270
BanI GGYRCC 1 cut(s) 601
BanII GRGCYC 3 cut(s) 155, 228, 270
BbrPI CACGTG 1 cut(s) 118
BbsI GAAGAC 1 cut(s) 693
Bbv12I GWGCWC 3 cut(s) 126, 228, 593
BbvI GCAGC 6 cut(s) 371, 379, 726, 1000, 1006, 1028
BccI CCATC 6 cut(s) 119, 641, 728, 751, 798, 919
BcgI CGANNNNNNTGC 2 cut(s) 280, 314
BciT130I CCWGG 3 cut(s) 92, 161, 490
BcnI CCSGG 4 cut(s) 142, 468, 469, 775
BcoDI GTCTC 2 cut(s) 235, 428
BcuI ACTAGT 1 cut(s) 437
BfaI CTAG 2 cut(s) 438, 884
BfmI CTRYAG 1 cut(s) 1014
BfuAI ACCTGC 1 cut(s) 325
BglII AGATCT 1 cut(s) 843
BlpI GCTNAGC 1 cut(s) 125
Bme1390I CCNGG 7 cut(s) 92, 142, 161, 468, 469, 490, 775
Bme18I GGWCC 2 cut(s) 163, 252
BmeT110I CYCGRG 1 cut(s) 467
BmgBI CACGTC 1 cut(s) 712
BmgT120I GGNCC 6 cut(s) 151, 152, 163, 252, 266, 267
BmiI GGNNCC 7 cut(s) 153, 154, 253, 254, 268, 269, 603
BmrFI CCNGG 7 cut(s) 92, 142, 161, 468, 469, 490, 775
BmsI GCATC 3 cut(s) 27, 535, 557
BpiI GAAGAC 1 cut(s) 693
BplI GAGNNNNNCTC 2 cut(s) 215, 247
BpmI CTGGAG 1 cut(s) 429
Bpu1102I GCTNAGC 1 cut(s) 125
BpuEI CTTGAG 2 cut(s) 167, 302
BpuMI CCSGG 4 cut(s) 142, 468, 469, 775
BsaAI YACGTR 1 cut(s) 118
BsaBI GATNNNNATC 1 cut(s) 789
BsaJI CCNNGG 2 cut(s) 159, 467
BsaXI ACNNNNNCTCC 2 cut(s) 194, 224
Bsc4I CCNNNNNNNGG 6 cut(s) 136, 160, 263, 264, 451, 905
Bse1I ACTGG 1 cut(s) 1120
Bse8I GATNNNNATC 1 cut(s) 789
BseBI CCWGG 3 cut(s) 92, 161, 490
BseDI CCNNGG 2 cut(s) 159, 467
BseGI GGATG 4 cut(s) 18, 111, 930, 1081
BseJI GATNNNNATC 1 cut(s) 789
BseLI CCNNNNNNNGG 6 cut(s) 136, 160, 263, 264, 451, 905
BseMII CTCAG 3 cut(s) 63, 139, 759
BseNI ACTGG 1 cut(s) 1120
BseRI GAGGAG 2 cut(s) 161, 551
BseSI GKGCMC 2 cut(s) 155, 270
BseX3I CGGCCG 1 cut(s) 138
BseXI GCAGC 6 cut(s) 371, 379, 726, 1000, 1006, 1028
BseYI CCCAGC 1 cut(s) 257
Bsh1236I CGCG 1 cut(s) 137
Bsh1285I CGRYCG 1 cut(s) 141
BshFI GGCC 6 cut(s) 140, 153, 268, 404, 444, 1076
BshNI GGYRCC 1 cut(s) 601
BsiEI CGRYCG 1 cut(s) 141
BsiHKAI GWGCWC 3 cut(s) 126, 228, 593
BsiHKCI CYCGRG 1 cut(s) 467
BsiSI CCGG 3 cut(s) 141, 468, 774
BslFI GGGAC 2 cut(s) 60, 238
BslI CCNNNNNNNGG 6 cut(s) 136, 160, 263, 264, 451, 905
BsmAI GTCTC 2 cut(s) 235, 428
BsmBI CGTCTC 1 cut(s) 235
BsmFI GGGAC 2 cut(s) 60, 238
BsnI GGCC 6 cut(s) 140, 153, 268, 404, 444, 1076
BsoBI CYCGRG 1 cut(s) 467
Bsp120I GGGCCC 2 cut(s) 151, 266
Bsp1286I GDGCHC 5 cut(s) 126, 155, 228, 270, 593
Bsp143I GATC 7 cut(s) 4, 132, 199, 784, 843, 1078, 1098
Bsp1720I GCTNAGC 1 cut(s) 125
BspACI CCGC 7 cut(s) 22, 104, 137, 195, 219, 261, 694
BspANI GGCC 6 cut(s) 140, 153, 268, 404, 444, 1076
BspCNI CTCAG 3 cut(s) 64, 138, 760
BspFNI CGCG 1 cut(s) 137
BspHI TCATGA 1 cut(s) 609
BspLI GGNNCC 7 cut(s) 153, 154, 253, 254, 268, 269, 603
BspMAI CTGCAG 1 cut(s) 1018
BspMI ACCTGC 1 cut(s) 325
BspPI GGATC 3 cut(s) 12, 792, 1093
BspT107I GGYRCC 1 cut(s) 601
BsrI ACTGG 1 cut(s) 1120
BssECI CCNNGG 2 cut(s) 159, 467
BssMI GATC 7 cut(s) 4, 132, 199, 784, 843, 1078, 1098
Bst2UI CCWGG 3 cut(s) 92, 161, 490
Bst4CI ACNGT 3 cut(s) 595, 658, 1123
Bst6I CTCTTC 2 cut(s) 245, 1097
BstBAI YACGTR 1 cut(s) 118
BstDEI CTNAG 5 cut(s) 8, 72, 125, 661, 768
BstENI CCTNNNNNAGG 1 cut(s) 449
BstF5I GGATG 4 cut(s) 18, 111, 930, 1081
BstFNI CGCG 1 cut(s) 137
BstKTI GATC 7 cut(s) 7, 135, 202, 787, 846, 1081, 1101
BstMAI GTCTC 2 cut(s) 235, 428
BstMBI GATC 7 cut(s) 4, 132, 199, 784, 843, 1078, 1098
BstMCI CGRYCG 1 cut(s) 141
BstMWI GCNNNNNNNGC 4 cut(s) 356, 401, 1019, 1025
BstNI CCWGG 3 cut(s) 92, 161, 490
BstSCI CCNGG 7 cut(s) 90, 140, 159, 466, 467, 488, 773
BstSFI CTRYAG 1 cut(s) 1014
BstSLI GKGCMC 2 cut(s) 155, 270
BstUI CGCG 1 cut(s) 137
BstV1I GCAGC 6 cut(s) 371, 379, 726, 1000, 1006, 1028
BstV2I GAAGAC 1 cut(s) 693
BstX2I RGATCY 2 cut(s) 4, 843
BstXI CCANNNNNNTGG 1 cut(s) 118
BstYI RGATCY 2 cut(s) 4, 843
BstZI CGGCCG 1 cut(s) 138
BsuRI GGCC 6 cut(s) 140, 153, 268, 404, 444, 1076
BtrI CACGTC 1 cut(s) 712
BtsCI GGATG 4 cut(s) 18, 111, 930, 1081
BtsI GCAGTG 1 cut(s) 345
BtsIMutI CAGTG 2 cut(s) 345, 910
BveI ACCTGC 1 cut(s) 325
CciI TCATGA 1 cut(s) 609
Cfr13I GGNCC 6 cut(s) 151, 152, 163, 252, 266, 267
Cfr9I CCCGGG 1 cut(s) 467
CsiI ACCWGGT 1 cut(s) 90
CspCI CAANNNNNGTGG 2 cut(s) 1051, 1086
CviAII CATG 6 cut(s) 420, 566, 610, 706, 1126, 1139
DdeI CTNAG 5 cut(s) 8, 72, 125, 661, 768
DpnI GATC 7 cut(s) 6, 134, 201, 786, 845, 1080, 1100
DpnII GATC 7 cut(s) 4, 132, 199, 784, 843, 1078, 1098
DraIII CACNNNGTG 1 cut(s) 121
EaeI YGGCCR 2 cut(s) 138, 1074
EagI CGGCCG 1 cut(s) 138
Eam1104I CTCTTC 2 cut(s) 245, 1097
EarI CTCTTC 2 cut(s) 245, 1097
EciI GGCGGA 1 cut(s) 184
Ecl136II GAGCTC 1 cut(s) 226
EclXI CGGCCG 1 cut(s) 138
Eco24I GRGCYC 3 cut(s) 155, 228, 270
Eco47I GGWCC 2 cut(s) 163, 252
Eco52I CGGCCG 1 cut(s) 138
Eco53kI GAGCTC 1 cut(s) 226
Eco57I CTGAAG 4 cut(s) 50, 417, 808, 896
Eco72I CACGTG 1 cut(s) 118
Eco88I CYCGRG 1 cut(s) 467
EcoICRI GAGCTC 1 cut(s) 226
EcoNI CCTNNNNNAGG 1 cut(s) 449
EcoO109I RGGNCCY 4 cut(s) 151, 152, 252, 267
EcoRI GAATTC 1 cut(s) 415
EcoRII CCWGG 3 cut(s) 90, 159, 488
EcoT22I ATGCAT 2 cut(s) 511, 550
EcoT38I GRGCYC 3 cut(s) 155, 228, 270
Esp3I CGTCTC 1 cut(s) 235
FaeI CATG 6 cut(s) 423, 569, 613, 709, 1129, 1142
FalI AAGNNNNNCTT 2 cut(s) 590, 622
FaqI GGGAC 2 cut(s) 60, 238
FatI CATG 6 cut(s) 419, 565, 609, 705, 1125, 1138
FblI GTMKAC 2 cut(s) 96, 300
FokI GGATG 4 cut(s) 5, 98, 937, 1068
FriOI GRGCYC 3 cut(s) 155, 228, 270
FspBI CTAG 2 cut(s) 438, 884
GsaI CCCAGC 1 cut(s) 261
GsuI CTGGAG 1 cut(s) 429
HaeIII GGCC 6 cut(s) 140, 153, 268, 404, 444, 1076
HapII CCGG 3 cut(s) 141, 468, 774
Hin1II CATG 6 cut(s) 423, 569, 613, 709, 1129, 1142
HincII GTYRAC 2 cut(s) 301, 478
HindII GTYRAC 2 cut(s) 301, 478
HindIII AAGCTT 1 cut(s) 861
HinfI GANTC 5 cut(s) 83, 764, 770, 828, 932
HpaII CCGG 3 cut(s) 141, 468, 774
HphI GGTGA 3 cut(s) 194, 695, 830
Hpy166II GTNNAC 5 cut(s) 97, 301, 343, 478, 931
Hpy188I TCNGA 9 cut(s) 69, 148, 247, 384, 769, 827, 876, 948, 1103
Hpy188III TCNNGA 5 cut(s) 408, 581, 610, 722, 1096
Hpy8I GTNNAC 5 cut(s) 97, 301, 343, 478, 931
Hpy99I CGWCG 3 cut(s) 38, 251, 587
HpyAV CCTTC 7 cut(s) 223, 333, 587, 616, 871, 991, 995
HpyCH4III ACNGT 3 cut(s) 595, 658, 1123
HpyCH4IV ACGT 3 cut(s) 36, 117, 711
HpyCH4V TGCA 6 cut(s) 503, 509, 548, 709, 1016, 1157
HpyF10VI GCNNNNNNNGC 4 cut(s) 356, 401, 1019, 1025
HpyF3I CTNAG 5 cut(s) 8, 72, 125, 661, 768
HpySE526I ACGT 3 cut(s) 36, 117, 711
Hsp92II CATG 6 cut(s) 423, 569, 613, 709, 1129, 1142
KflI GGGWCCC 1 cut(s) 252
Kzo9I GATC 7 cut(s) 4, 132, 199, 784, 843, 1078, 1098
LmnI GCTCC 3 cut(s) 174, 524, 588
Lsp1109I GCAGC 6 cut(s) 371, 379, 726, 1000, 1006, 1028
LweI GCATC 3 cut(s) 27, 535, 557
MabI ACCWGGT 1 cut(s) 90
MaeI CTAG 2 cut(s) 438, 884
MaeII ACGT 3 cut(s) 36, 117, 711
MaeIII GTNAC 1 cut(s) 818
MalI GATC 7 cut(s) 6, 134, 201, 786, 845, 1080, 1100
MboI GATC 7 cut(s) 4, 132, 199, 784, 843, 1078, 1098
MboII GAAGA 7 cut(s) 232, 634, 698, 710, 785, 1084, 1118
MflI RGATCY 2 cut(s) 4, 843
MhlI GDGCHC 5 cut(s) 126, 155, 228, 270, 593
MluCI AATT 3 cut(s) 415, 1040, 1109
MlyI GAGTC 3 cut(s) 779, 822, 926
MmeI TCCRAC 2 cut(s) 126, 270
Mph1103I ATGCAT 2 cut(s) 511, 550
MseI TTAA 2 cut(s) 597, 840
MslI CAYNNNNRTG 2 cut(s) 116, 989
MspA1I CMGCKG 2 cut(s) 261, 1019
MspI CCGG 3 cut(s) 141, 468, 774
MspR9I CCNGG 7 cut(s) 92, 142, 161, 468, 469, 490, 775
MvaI CCWGG 3 cut(s) 92, 161, 490
MvnI CGCG 1 cut(s) 137
MwoI GCNNNNNNNGC 4 cut(s) 356, 401, 1019, 1025
NciI CCSGG 4 cut(s) 142, 468, 469, 775
NdeII GATC 7 cut(s) 4, 132, 199, 784, 843, 1078, 1098
NlaIII CATG 6 cut(s) 423, 569, 613, 709, 1129, 1142
NlaIV GGNNCC 7 cut(s) 153, 154, 253, 254, 268, 269, 603
NmeAIII GCCGAG 1 cut(s) 247
NmuCI GTSAC 1 cut(s) 818
NsiI ATGCAT 2 cut(s) 511, 550
PagI TCATGA 1 cut(s) 609
PaqCI CACCTGC 1 cut(s) 325
PfeI GAWTC 2 cut(s) 83, 764
PleI GAGTC 3 cut(s) 778, 822, 926
PmaCI CACGTG 1 cut(s) 118
PmlI CACGTG 1 cut(s) 118
PpsI GAGTC 3 cut(s) 778, 822, 926
Ppu21I YACGTR 1 cut(s) 118
PpuMI RGGWCCY 1 cut(s) 252
Psp124BI GAGCTC 1 cut(s) 228
Psp5II RGGWCCY 1 cut(s) 252
Psp6I CCWGG 3 cut(s) 90, 159, 488
PspCI CACGTG 1 cut(s) 118
PspFI CCCAGC 1 cut(s) 257
PspGI CCWGG 3 cut(s) 90, 159, 488
PspN4I GGNNCC 7 cut(s) 153, 154, 253, 254, 268, 269, 603
PspOMI GGGCCC 2 cut(s) 151, 266
PspPI GGNCC 6 cut(s) 151, 152, 163, 252, 266, 267
PspPPI RGGWCCY 1 cut(s) 252
PsrI GAACNNNNNNTAC 2 cut(s) 80, 112
PstI CTGCAG 1 cut(s) 1018
PsuI RGATCY 2 cut(s) 4, 843
PvuII CAGCTG 1 cut(s) 1019
RseI CAYNNNNRTG 2 cut(s) 116, 989
SacI GAGCTC 1 cut(s) 228
SalI GTCGAC 1 cut(s) 299
SaqAI TTAA 2 cut(s) 597, 840
Sau3AI GATC 7 cut(s) 4, 132, 199, 784, 843, 1078, 1098
Sau96I GGNCC 6 cut(s) 151, 152, 163, 252, 266, 267
SchI GAGTC 3 cut(s) 779, 822, 926
ScrFI CCNGG 7 cut(s) 92, 142, 161, 468, 469, 490, 775
SduI GDGCHC 5 cut(s) 126, 155, 228, 270, 593
SexAI ACCWGGT 1 cut(s) 90
SfaNI GCATC 3 cut(s) 27, 535, 557
SfcI CTRYAG 1 cut(s) 1014
SinI GGWCC 2 cut(s) 163, 252
SmaI CCCGGG 1 cut(s) 469
SmiMI CAYNNNNRTG 2 cut(s) 116, 989
SmlI CTYRAG 2 cut(s) 182, 317
SmoI CTYRAG 2 cut(s) 182, 317
SpeI ACTAGT 1 cut(s) 437
Sse9I AATT 3 cut(s) 415, 1040, 1109
SsiI CCGC 7 cut(s) 22, 104, 137, 195, 219, 261, 694
SspMI CTAG 2 cut(s) 438, 884
SstI GAGCTC 1 cut(s) 228
StyD4I CCNGG 7 cut(s) 90, 140, 159, 466, 467, 488, 773
TaaI ACNGT 3 cut(s) 595, 658, 1123
TaiI ACGT 3 cut(s) 39, 120, 714
TaqI TCGA 5 cut(s) 86, 300, 375, 582, 762
TaqII GACCGA 1 cut(s) 1124
TasI AATT 3 cut(s) 415, 1040, 1109
TauI GCSGC 4 cut(s) 106, 140, 221, 697
TfiI GAWTC 2 cut(s) 83, 764
Tru1I TTAA 2 cut(s) 597, 840
Tru9I TTAA 2 cut(s) 597, 840
TscAI CASTG 2 cut(s) 352, 910
TseFI GTSAC 1 cut(s) 818
TseI GCWGC 6 cut(s) 359, 392, 739, 1013, 1016, 1019
Tsp45I GTSAC 1 cut(s) 818
TspDTI ATGAA 4 cut(s) 408, 598, 973, 1120
TspGWI ACGGA 2 cut(s) 223, 1022
TspMI CCCGGG 1 cut(s) 467
TspRI CASTG 2 cut(s) 352, 910
VpaK11BI GGWCC 2 cut(s) 163, 252
XagI CCTNNNNNAGG 1 cut(s) 449
XapI RAATTY 1 cut(s) 415
XcmI CCANNNNNNNNNTGG 1 cut(s) 1069
XmaI CCCGGG 1 cut(s) 467
XmiI GTMKAC 2 cut(s) 96, 300
XspI CTAG 2 cut(s) 438, 884
Zsp2I ATGCAT 2 cut(s) 511, 550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.