AT2G03360

Protein of unknown function (DUF563)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0001444
Physical Location & Seq
Reverse (-)
1022190 .. 1024497
2308 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G03360.2

Sequence Viewer

Length: 1356 bp
ATGGTTAGGAAAACGACGTCGAAGAGTTATTCGGTGGCGTTGGTGATCGTTATGGTTATATATGTTGCTTTCTCCTCCGTCTTCGATCGTCAATTGTTTCGTTCGTTAAGTTTCTCTCAAGGTACGTTACAACAAAGATGGGAATCAAGAAGAACAAAGCAAAACCCAAAAGTGATGGCTGCATCAGCAAAAATCACATGTGACCGATCCCACACTAGTTACGATCTTTGCTCCATCAACGGCTCATGTATTCTCAACCCTAAAACCGGAACTCTAACTCTTATGGACCGAACACTTACCACATCAGCACCACTTGTCGAGAAAATCAGGCCATACCCAAGAAAATCAGAAAACTGGATCATGCCTAGGATCAGAGAGCTAAAACTAACTTCAGGCCCATCGGACCTGACACGATCATGTGATATAACACATGATTCGCCGGCCATTGTGTTCAGTGCTGGAGGTTACACCGGAAGTATTTATCACGATTTTATCGATGGTTTCATCCCACTTTTTATCACGGCCAACTCGGTATACCCGGACCGCGATTTCATCCTCGTGGTTGTGAATCCTAAGGAATGGTGGATGCCAAAATACATCGATATTCTAGGTACGTTTAGCAAACACAAAACCATATTACTAGACAAAGAAAATGCTTCTATTACACATTGCTTCACTTCAGCCACTGTGGGCCTAATTTCACATGGGCCTATGACAATAGACCCAACCCAAATACCCAACTCCAAATCATTAGTAGACTTCCATAATCTCCTAGACAAAGCCTTGAACCCAAACCTATCTATTATCAAAATTAACAAGCCTCGTCTCATATTGGTCCGTAGATATGGTAACATTGGTCGAGTGATATTAAACGAGGAAGAGATCAGAGAGATGCTTGAAGATGTTGGATTCGAGGTAATCACATTTAGACCATCAAAAACAACGAGTTTGAGAGAAGCGTATAAACTTATAAAGTCAAGCCACGGGATGATCGGGGTTCATGGTGCAGCATTAACCCAGTTGTTGTTTCTTCGACCAGGTTCAGTGTTGGTTCAAATTGTTCCGGTTGGACTAGGTTGGGTGTCTAAAACGTGTTTCGAAACGCCGGCTAAAGCAATGAAGTTGGATTATACGGAGTATCGAGTAAATGTGGAAGAAAGCAGTTTGATAGAGAAGTATAGTAGAGATGATTTGGTTTTGAAAGATCCTATTGCTTATAGAGGAATGGATTGGAATGTGACTAAAATGAAAGTCTATTTAAAAGATCAAGATGTGAGGTTAGATGTGAATCGGTTTAGGAAACATATGAATGAAGCATACAAGAAAGCTAAGTCGTTTATGGACTTAAACGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00514 map00514
Pfam Domains
Protein Families
DUF563

Protein Analysis

451

Amino Acids

51.22

Weight (kDa)

9.44

Isoelectric Point (pI)

34.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_61 PF04577 247 - 355 1.3e-13 Glycosyltransferase 61
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 971
AatII GACGTC 1 cut(s) 20
AccI GTMKAC 2 cut(s) 534, 756
AccII CGCG 1 cut(s) 546
AciI CCGC 1 cut(s) 544
AclWI GGATC 4 cut(s) 201, 365, 377, 1199
AcoI YGGCCR 2 cut(s) 441, 522
AcuI CTGAAG 2 cut(s) 375, 663
AcyI GRCGYC 1 cut(s) 17
AfaI GTAC 2 cut(s) 124, 613
AfiI CCNNNNNNNGG 1 cut(s) 266
AflIII ACRYGT 2 cut(s) 197, 1091
AgsI TTSAA 4 cut(s) 787, 899, 1055, 1201
AhlI ACTAGT 1 cut(s) 215
AjnI CCWGG 1 cut(s) 1036
AluBI AGCT 2 cut(s) 379, 1328
AluI AGCT 2 cut(s) 379, 1328
Alw26I GTCTC 1 cut(s) 830
AlwI GGATC 4 cut(s) 201, 365, 377, 1199
AlwNI CAGNNNCTG 1 cut(s) 686
AoxI GGCC 6 cut(s) 329, 394, 441, 522, 691, 707
ApeKI GCWGC 2 cut(s) 179, 1007
AspA2I CCTAGG 1 cut(s) 365
AspS9I GGNCC 7 cut(s) 286, 395, 403, 541, 691, 707, 835
AsuC2I CCSGG 1 cut(s) 539
AsuHPI GGTGA 1 cut(s) 55
AsuII TTCGAA 1 cut(s) 1098
AvaII GGWCC 4 cut(s) 286, 403, 541, 835
AvrII CCTAGG 1 cut(s) 365
AxyI CCTNAGG 1 cut(s) 573
BauI CACGAG 1 cut(s) 557
BbsI GAAGAC 1 cut(s) 73
BbvI GCAGC 2 cut(s) 166, 1019
BccI CCATC 6 cut(s) 132, 169, 242, 406, 491, 940
BceAI ACGGC 2 cut(s) 256, 537
BciT130I CCWGG 1 cut(s) 1038
BcnI CCSGG 1 cut(s) 539
BcoDI GTCTC 1 cut(s) 830
BcuI ACTAGT 1 cut(s) 215
BfaI CTAG 6 cut(s) 216, 366, 608, 641, 773, 1073
BisI GCNGC 2 cut(s) 180, 1008
BlnI CCTAGG 1 cut(s) 365
BlsI GCNGC 2 cut(s) 181, 1009
Bme1390I CCNGG 2 cut(s) 539, 1038
Bme18I GGWCC 4 cut(s) 286, 403, 541, 835
BmgT120I GGNCC 7 cut(s) 286, 395, 403, 541, 691, 707, 835
BmrFI CCNGG 2 cut(s) 539, 1038
BmrI ACTGGG 1 cut(s) 1012
BmsI GCATC 3 cut(s) 191, 576, 882
BmuI ACTGGG 1 cut(s) 1012
BpiI GAAGAC 1 cut(s) 73
BpmI CTGGAG 1 cut(s) 480
Bpu14I TTCGAA 1 cut(s) 1098
BpuEI CTTGAG 1 cut(s) 102
BpuMI CCSGG 1 cut(s) 539
Bsa29I ATCGAT 2 cut(s) 495, 600
BsaBI GATNNNNATC 2 cut(s) 142, 1287
BsaHI GRCGYC 1 cut(s) 17
BsaJI CCNNGG 2 cut(s) 365, 982
BsaWI WCCGGW 3 cut(s) 266, 470, 1063
Bsc4I CCNNNNNNNGG 1 cut(s) 266
Bse118I RCCGGY 2 cut(s) 439, 1105
Bse1I ACTGG 2 cut(s) 359, 1018
Bse21I CCTNAGG 1 cut(s) 573
Bse3DI GCAATG 2 cut(s) 667, 1122
Bse8I GATNNNNATC 2 cut(s) 142, 1287
BseBI CCWGG 1 cut(s) 1038
BseCI ATCGAT 2 cut(s) 495, 600
BseDI CCNNGG 2 cut(s) 365, 982
BseGI GGATG 4 cut(s) 504, 552, 591, 993
BseJI GATNNNNATC 2 cut(s) 142, 1287
BseLI CCNNNNNNNGG 1 cut(s) 266
BseMI GCAATG 2 cut(s) 667, 1122
BseNI ACTGG 2 cut(s) 359, 1018
BseRI GAGGAG 1 cut(s) 64
BseXI GCAGC 2 cut(s) 166, 1019
BsgI GTGCAG 1 cut(s) 1026
Bsh1236I CGCG 1 cut(s) 546
Bsh1285I CGRYCG 1 cut(s) 88
BshFI GGCC 6 cut(s) 331, 396, 443, 524, 693, 709
BshVI ATCGAT 2 cut(s) 495, 600
BsiEI CGRYCG 1 cut(s) 88
BsiSI CCGG 6 cut(s) 267, 440, 471, 539, 1064, 1106
BslI CCNNNNNNNGG 1 cut(s) 266
BsmAI GTCTC 1 cut(s) 830
BsmBI CGTCTC 1 cut(s) 830
BsnI GGCC 6 cut(s) 331, 396, 443, 524, 693, 709
Bsp119I TTCGAA 1 cut(s) 1098
BspACI CCGC 1 cut(s) 544
BspANI GGCC 6 cut(s) 331, 396, 443, 524, 693, 709
BspDI ATCGAT 2 cut(s) 495, 600
BspFNI CGCG 1 cut(s) 546
BspPI GGATC 4 cut(s) 201, 365, 377, 1199
BspT104I TTCGAA 1 cut(s) 1098
BsrDI GCAATG 2 cut(s) 667, 1122
BsrFI RCCGGY 2 cut(s) 439, 1105
BsrI ACTGG 2 cut(s) 359, 1018
BssAI RCCGGY 2 cut(s) 439, 1105
BssECI CCNNGG 2 cut(s) 365, 982
BssNAI GTATAC 1 cut(s) 535
BssNI GRCGYC 1 cut(s) 17
BssSI CACGAG 1 cut(s) 557
BssT1I CCWWGG 1 cut(s) 365
Bst1107I GTATAC 1 cut(s) 535
Bst2BI CACGAG 1 cut(s) 557
Bst2UI CCWGG 1 cut(s) 1038
Bst4CI ACNGT 2 cut(s) 688, 1352
Bst6I CTCTTC 2 cut(s) 17, 873
BstACI GRCGYC 1 cut(s) 17
BstBI TTCGAA 1 cut(s) 1098
BstC8I GCNNGC 2 cut(s) 441, 1107
BstDEI CTNAG 2 cut(s) 573, 1329
BstDSI CCRYGG 1 cut(s) 982
BstF5I GGATG 4 cut(s) 504, 552, 591, 993
BstFNI CGCG 1 cut(s) 546
BstMAI GTCTC 1 cut(s) 830
BstMCI CGRYCG 1 cut(s) 88
BstMWI GCNNNNNNNGC 1 cut(s) 185
BstNI CCWGG 1 cut(s) 1038
BstNSI RCATGY 1 cut(s) 201
BstSCI CCNGG 2 cut(s) 537, 1036
BstUI CGCG 1 cut(s) 546
BstV1I GCAGC 2 cut(s) 166, 1019
BstV2I GAAGAC 1 cut(s) 73
BstX2I RGATCY 1 cut(s) 1204
BstYI RGATCY 1 cut(s) 1204
BstZ17I GTATAC 1 cut(s) 535
Bsu15I ATCGAT 2 cut(s) 495, 600
Bsu36I CCTNAGG 1 cut(s) 573
BsuRI GGCC 6 cut(s) 331, 396, 443, 524, 693, 709
BsuTUI ATCGAT 2 cut(s) 495, 600
BtgI CCRYGG 1 cut(s) 982
BtsCI GGATG 4 cut(s) 504, 552, 591, 993
BtsIMutI CAGTG 3 cut(s) 460, 684, 1050
Cac8I GCNNGC 2 cut(s) 441, 1107
CaiI CAGNNNCTG 1 cut(s) 686
Cfr10I RCCGGY 2 cut(s) 439, 1105
Cfr13I GGNCC 7 cut(s) 286, 395, 403, 541, 691, 707, 835
ClaI ATCGAT 2 cut(s) 495, 600
CpoI CGGWCCG 1 cut(s) 541
CsiI ACCWGGT 1 cut(s) 1036
Csp6I GTAC 2 cut(s) 123, 612
CspI CGGWCCG 1 cut(s) 541
CviAII CATG 7 cut(s) 198, 246, 361, 417, 431, 704, 1001
CviQI GTAC 2 cut(s) 123, 612
DdeI CTNAG 2 cut(s) 573, 1329
DraI TTTAAA 1 cut(s) 1260
EaeI YGGCCR 2 cut(s) 441, 522
Eam1104I CTCTTC 2 cut(s) 17, 873
EarI CTCTTC 2 cut(s) 17, 873
Eco130I CCWWGG 1 cut(s) 365
Eco47I GGWCC 4 cut(s) 286, 403, 541, 835
Eco57I CTGAAG 2 cut(s) 375, 663
Eco81I CCTNAGG 1 cut(s) 573
EcoRII CCWGG 1 cut(s) 1036
EcoT14I CCWWGG 1 cut(s) 365
ErhI CCWWGG 1 cut(s) 365
Esp3I CGTCTC 1 cut(s) 830
FaeI CATG 7 cut(s) 201, 249, 364, 420, 434, 707, 1004
FatI CATG 7 cut(s) 197, 245, 360, 416, 430, 703, 1000
FauNDI CATATG 1 cut(s) 1305
FblI GTMKAC 2 cut(s) 534, 756
Fnu4HI GCNGC 2 cut(s) 180, 1008
FokI GGATG 4 cut(s) 491, 539, 598, 1000
Fsp4HI GCNGC 2 cut(s) 180, 1008
FspBI CTAG 6 cut(s) 216, 366, 608, 641, 773, 1073
GluI GCNGC 2 cut(s) 180, 1008
GsuI CTGGAG 1 cut(s) 480
HaeIII GGCC 6 cut(s) 331, 396, 443, 524, 693, 709
HapII CCGG 6 cut(s) 267, 440, 471, 539, 1064, 1106
Hin1I GRCGYC 1 cut(s) 17
Hin1II CATG 7 cut(s) 201, 249, 364, 420, 434, 707, 1004
HinfI GANTC 5 cut(s) 143, 434, 568, 909, 1288
HpaII CCGG 6 cut(s) 267, 440, 471, 539, 1064, 1106
HphI GGTGA 1 cut(s) 55
Hpy166II GTNNAC 2 cut(s) 535, 757
Hpy188I TCNGA 4 cut(s) 349, 374, 403, 887
Hpy188III TCNNGA 4 cut(s) 147, 319, 485, 1268
Hpy8I GTNNAC 2 cut(s) 535, 757
Hpy99I CGWCG 2 cut(s) 19, 22
HpyCH4III ACNGT 2 cut(s) 688, 1352
HpyCH4IV ACGT 4 cut(s) 17, 125, 614, 1091
HpyCH4V TGCA 2 cut(s) 182, 1007
HpyF10VI GCNNNNNNNGC 1 cut(s) 185
HpyF3I CTNAG 2 cut(s) 573, 1329
HpySE526I ACGT 4 cut(s) 17, 125, 614, 1091
Hsp92I GRCGYC 1 cut(s) 17
Hsp92II CATG 7 cut(s) 201, 249, 364, 420, 434, 707, 1004
KroI GCCGGC 2 cut(s) 439, 1105
KroNI GCCGGC 2 cut(s) 441, 1107
LmnI GCTCC 1 cut(s) 236
Lsp1109I GCAGC 2 cut(s) 166, 1019
LweI GCATC 3 cut(s) 191, 576, 882
MabI ACCWGGT 1 cut(s) 1036
MaeI CTAG 6 cut(s) 216, 366, 608, 641, 773, 1073
MaeII ACGT 4 cut(s) 17, 125, 614, 1091
MaeIII GTNAC 6 cut(s) 126, 200, 218, 464, 848, 1237
MboII GAAGA 7 cut(s) 34, 73, 162, 890, 911, 1022, 1166
MfeI CAATTG 1 cut(s) 92
MflI RGATCY 1 cut(s) 1204
MluCI AATT 4 cut(s) 92, 696, 810, 1056
MmeI TCCRAC 3 cut(s) 886, 1048, 1104
MnlI CCTC 8 cut(s) 85, 455, 566, 831, 868, 907, 1214, 1269
MroNI GCCGGC 2 cut(s) 439, 1105
MseI TTAA 6 cut(s) 107, 813, 869, 1013, 1259, 1346
MslI CAYNNNNRTG 3 cut(s) 415, 557, 1308
MspI CCGG 6 cut(s) 267, 440, 471, 539, 1064, 1106
MspR9I CCNGG 2 cut(s) 539, 1038
MunI CAATTG 1 cut(s) 92
MvaI CCWGG 1 cut(s) 1038
MvnI CGCG 1 cut(s) 546
MwoI GCNNNNNNNGC 1 cut(s) 185
NaeI GCCGGC 2 cut(s) 441, 1107
NciI CCSGG 1 cut(s) 539
NdeI CATATG 1 cut(s) 1305
NgoMIV GCCGGC 2 cut(s) 439, 1105
NlaIII CATG 7 cut(s) 201, 249, 364, 420, 434, 707, 1004
NmuCI GTSAC 2 cut(s) 200, 1237
NspI RCATGY 1 cut(s) 201
NspV TTCGAA 1 cut(s) 1098
PciI ACATGT 1 cut(s) 197
PcsI WCGNNNNNNNCGW 1 cut(s) 492
PdiI GCCGGC 2 cut(s) 441, 1107
PfeI GAWTC 5 cut(s) 143, 434, 568, 909, 1288
PkrI GCNGC 2 cut(s) 181, 1009
Ple19I CGATCG 1 cut(s) 88
PscI ACATGT 1 cut(s) 197
PsiI TTATAA 1 cut(s) 971
Psp6I CCWGG 1 cut(s) 1036
PspGI CCWGG 1 cut(s) 1036
PspPI GGNCC 7 cut(s) 286, 395, 403, 541, 691, 707, 835
PstNI CAGNNNCTG 1 cut(s) 686
PsuI RGATCY 1 cut(s) 1204
PvuI CGATCG 1 cut(s) 88
RsaI GTAC 2 cut(s) 124, 613
RsaNI GTAC 2 cut(s) 123, 612
RseI CAYNNNNRTG 3 cut(s) 415, 557, 1308
Rsr2I CGGWCCG 1 cut(s) 541
RsrII CGGWCCG 1 cut(s) 541
SaqAI TTAA 6 cut(s) 107, 813, 869, 1013, 1259, 1346
SatI GCNGC 2 cut(s) 180, 1008
Sau96I GGNCC 7 cut(s) 286, 395, 403, 541, 691, 707, 835
ScrFI CCNGG 2 cut(s) 539, 1038
SexAI ACCWGGT 1 cut(s) 1036
SfaNI GCATC 3 cut(s) 191, 576, 882
SfuI TTCGAA 1 cut(s) 1098
SinI GGWCC 4 cut(s) 286, 403, 541, 835
SmiMI CAYNNNNRTG 3 cut(s) 415, 557, 1308
SmlI CTYRAG 1 cut(s) 117
SmoI CTYRAG 1 cut(s) 117
SpeI ACTAGT 1 cut(s) 215
Sse9I AATT 4 cut(s) 92, 696, 810, 1056
SsiI CCGC 1 cut(s) 544
SspMI CTAG 6 cut(s) 216, 366, 608, 641, 773, 1073
StyD4I CCNGG 2 cut(s) 537, 1036
StyI CCWWGG 1 cut(s) 365
TaaI ACNGT 2 cut(s) 688, 1352
TaiI ACGT 4 cut(s) 20, 128, 617, 1094
TaqII GACCGA 2 cut(s) 219, 303
TasI AATT 4 cut(s) 92, 696, 810, 1056
TfiI GAWTC 5 cut(s) 143, 434, 568, 909, 1288
Tru1I TTAA 6 cut(s) 107, 813, 869, 1013, 1259, 1346
Tru9I TTAA 6 cut(s) 107, 813, 869, 1013, 1259, 1346
TscAI CASTG 3 cut(s) 460, 691, 1050
TseFI GTSAC 2 cut(s) 200, 1237
TseI GCWGC 2 cut(s) 179, 1007
Tsp45I GTSAC 2 cut(s) 200, 1237
TspDTI ATGAA 7 cut(s) 493, 541, 989, 1133, 1262, 1322, 1326
TspGWI ACGGA 3 cut(s) 67, 827, 1148
TspRI CASTG 3 cut(s) 460, 691, 1050
VpaK11BI GGWCC 4 cut(s) 286, 403, 541, 835
XceI RCATGY 1 cut(s) 201
XmaJI CCTAGG 1 cut(s) 365
XmiI GTMKAC 2 cut(s) 534, 756
XspI CTAG 6 cut(s) 216, 366, 608, 641, 773, 1073
ZraI GACGTC 1 cut(s) 18
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.