Prupe.1G281500_v2.0.a1

Protein of unknown function (DUF563)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001444
Physical Location & Seq
Reverse (-)
28459847 .. 28462576
2730 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G281500.1

Sequence Viewer

Length: 1377 bp
ATGAAGAAGACAGTTTCGAGGGCTGCGCTGGTGGGAGTGGCGTTGTGCTTGTTTTTCATTATTTTCCAGATCAGCGTCTCATCCACCTCCAGATTTCTTAAATATGCTACCAATTCAGCCAAGCCTAATCAAGAAGAAGGAACACGTAAACTGAAGGTTATCAATCAACCAAACTCACACCCTCCAAAATCTTTGCGACTTCGGGTGGAAAGCCCAATCATCTGCGATCGTACTGACATACGCTATGATCTCTGCTCAATCAACGGCCCAACTTTTCTGGACCCCGCCAAGTTCACATTCTTCATTATAGGCTCGGCCAAACATTCAATCATGGAAAAAGTCCAGCCCTACCCTCGGAAATTCGAAAAATTCATAATGCCTCGCATCAAGAACCTCACACTCACTTCTGGACCACAAAGGCCACCATGTAAAGTTCCGCACAATGTTCCGGCCCTAGTATTCAGCGCGGGAGGGTACACCGGAAACTTCTTCCATGATTTCAACGACGGGTTCATCCCCCTCTTCATCACCGTCCACACGATCTTCCATGATCAAGACTTCGTGATCGTGGTGTCCGAAGCTCCCAATTGGTGGCCTAGTAAGTATGCAGATCTATTGACAGTGTTCACAAAGCACCCTATCATTGTCCTTAAAAATGATACTCCCACCCACTGTTTTCCTTCTGCCAAAATAGGCCTCATATCACATGGCTTCATGACTATAAATCAAACTTTACTACCCAATTCAAAAACGTTTTTGGATTTTCGAGTGCTCCTAGACAGAGCCTACACCCCACAAGCCCAACCCAAAGTCTTGACCTCCAAGGACACAAATCCTAGGCCCAAACTTGTGCTGGCCAGCCGCAAAGAAGCCAAGGGGCGCTCGATCTTGAACCAAGAGCAAGTGATTAGGTTGATAAAGAAGGTGGGCTTTGATGTGGTTGTGTTTAAGCCCAAGAACAAAACCCCATTGAATGAATCTTATGCATTGCTGAATTCAAGCCATGCCATGGTTGGTGTTCATGGCGCTGCACTTACGCACTCTTTGTTCCTTAGGCCAGGCGCTGTGCTTGTGCAAGTGGTTCCGATTGGGGTCGAATGGGCGGCATATGCGTTTTTCGGGAGGGTGGCGAAGGGTTTAAATTTGCAATATTCTGAGTATAAGATTGGGGTGGAAGAGAGTAGCCTGGTGAGCAAGTATGGGAAGGGCAGCTTGTTGGTGAAAGAACCCTTTGCACTTCAGAAAACAGGCTGGGACCCTGAGATTATGGACATTTACTTGAAGGAACAAAATGTCAAACTTGATTTGATCAGGTTCAAGGCTTGCTTGAAGAAGGCTTATATCAAGGCTAAGAGATTTATGGAGGCCAATGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00514 map00514
Pfam Domains
Protein Families
DUF563

Protein Analysis

459

Amino Acids

51.5

Weight (kDa)

9.81

Isoelectric Point (pI)

27.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 591, 1009
AccII CGCG 1 cut(s) 467
AciI CCGC 5 cut(s) 285, 437, 467, 862, 1103
AclI AACGTT 1 cut(s) 752
AcoI YGGCCR 2 cut(s) 315, 855
AcsI RAATTY 4 cut(s) 359, 368, 994, 1141
AcuI CTGAAG 2 cut(s) 173, 1223
AfaI GTAC 2 cut(s) 232, 476
AfiI CCNNNNNNNGG 3 cut(s) 354, 591, 1009
AflIII ACRYGT 1 cut(s) 143
AgsI TTSAA 9 cut(s) 327, 502, 747, 892, 973, 999, 1282, 1318, 1330
AjnI CCWGG 2 cut(s) 1057, 1185
AjuI GAANNNNNNNTTGG 2 cut(s) 281, 313
AluBI AGCT 2 cut(s) 581, 1212
AluI AGCT 2 cut(s) 581, 1212
Alw21I GWGCWC 1 cut(s) 774
Alw26I GTCTC 1 cut(s) 82
AlwNI CAGNNNCTG 1 cut(s) 1064
ApeKI GCWGC 3 cut(s) 23, 1028, 1209
ApoI RAATTY 4 cut(s) 359, 368, 994, 1141
AspA2I CCTAGG 1 cut(s) 836
AspLEI GCGC 5 cut(s) 28, 467, 882, 1028, 1064
AspS9I GGNCC 6 cut(s) 266, 280, 410, 451, 840, 1255
AsuHPI GGTGA 3 cut(s) 520, 1201, 1231
AsuII TTCGAA 1 cut(s) 363
AvaII GGWCC 3 cut(s) 280, 410, 1255
AvrII CCTAGG 1 cut(s) 836
AxyI CCTNAGG 1 cut(s) 1052
BalI TGGCCA 1 cut(s) 857
BbsI GAAGAC 1 cut(s) 14
Bbv12I GWGCWC 1 cut(s) 774
BbvI GCAGC 3 cut(s) 10, 1015, 1221
BceAI ACGGC 1 cut(s) 280
BciT130I CCWGG 2 cut(s) 1059, 1187
BclI TGATCA 2 cut(s) 550, 1308
BcoDI GTCTC 1 cut(s) 82
BfaI CTAG 4 cut(s) 455, 597, 776, 837
BfoI RGCGCY 3 cut(s) 883, 1029, 1065
BglII AGATCT 1 cut(s) 610
BisI GCNGC 5 cut(s) 24, 862, 1029, 1104, 1210
BlnI CCTAGG 1 cut(s) 836
BlsI GCNGC 5 cut(s) 25, 863, 1030, 1105, 1211
Bme1390I CCNGG 2 cut(s) 1059, 1187
Bme18I GGWCC 3 cut(s) 280, 410, 1255
BmgT120I GGNCC 6 cut(s) 266, 280, 410, 451, 840, 1255
BmiI GGNNCC 4 cut(s) 282, 1083, 1256, 1257
BmrFI CCNGG 2 cut(s) 1059, 1187
BmsI GCATC 1 cut(s) 393
BpiI GAAGAC 1 cut(s) 14
BpmI CTGGAG 1 cut(s) 73
Bpu14I TTCGAA 1 cut(s) 363
BsaAI YACGTR 1 cut(s) 146
BsaJI CCNNGG 5 cut(s) 353, 822, 836, 873, 1008
BsaWI WCCGGW 1 cut(s) 479
Bsc4I CCNNNNNNNGG 3 cut(s) 354, 591, 1009
Bse21I CCTNAGG 1 cut(s) 1052
Bse3DI GCAATG 1 cut(s) 986
BseBI CCWGG 2 cut(s) 1059, 1187
BseDI CCNNGG 5 cut(s) 353, 822, 836, 873, 1008
BseGI GGATG 2 cut(s) 80, 513
BseLI CCNNNNNNNGG 3 cut(s) 354, 591, 1009
BseMI GCAATG 1 cut(s) 986
BseMII CTCAG 2 cut(s) 1146, 1251
BseXI GCAGC 3 cut(s) 10, 1015, 1221
BseYI CCCAGC 1 cut(s) 1251
BsgI GTGCAG 1 cut(s) 1014
Bsh1236I CGCG 1 cut(s) 467
Bsh1285I CGRYCG 1 cut(s) 229
BsiEI CGRYCG 1 cut(s) 229
BsiHKAI GWGCWC 1 cut(s) 774
BsiSI CCGG 2 cut(s) 449, 480
BslFI GGGAC 1 cut(s) 1268
BslI CCNNNNNNNGG 3 cut(s) 354, 591, 1009
BsmAI GTCTC 1 cut(s) 82
BsmBI CGTCTC 1 cut(s) 82
BsmFI GGGAC 1 cut(s) 1268
Bsp119I TTCGAA 1 cut(s) 363
Bsp1286I GDGCHC 1 cut(s) 774
Bsp143I GATC 9 cut(s) 69, 226, 247, 540, 550, 564, 610, 885, 1308
Bsp19I CCATGG 1 cut(s) 1008
BspACI CCGC 5 cut(s) 285, 437, 467, 862, 1103
BspCNI CTCAG 2 cut(s) 1147, 1252
BspFNI CGCG 1 cut(s) 467
BspHI TCATGA 1 cut(s) 714
BspLI GGNNCC 4 cut(s) 282, 1083, 1256, 1257
BspT104I TTCGAA 1 cut(s) 363
BsrDI GCAATG 1 cut(s) 986
BssECI CCNNGG 5 cut(s) 353, 822, 836, 873, 1008
BssMI GATC 9 cut(s) 69, 226, 247, 540, 550, 564, 610, 885, 1308
BssT1I CCWWGG 4 cut(s) 822, 836, 873, 1008
Bst2UI CCWGG 2 cut(s) 1059, 1187
Bst4CI ACNGT 4 cut(s) 13, 532, 622, 674
Bst6I CTCTTC 2 cut(s) 527, 1170
BstBAI YACGTR 1 cut(s) 146
BstBI TTCGAA 1 cut(s) 363
BstC8I GCNNGC 3 cut(s) 855, 859, 1324
BstDEI CTNAG 4 cut(s) 1052, 1155, 1260, 1350
BstDSI CCRYGG 1 cut(s) 1008
BstF5I GGATG 2 cut(s) 80, 513
BstFNI CGCG 1 cut(s) 467
BstH2I RGCGCY 3 cut(s) 883, 1029, 1065
BstHHI GCGC 5 cut(s) 28, 467, 882, 1028, 1064
BstKTI GATC 9 cut(s) 72, 229, 250, 543, 553, 567, 613, 888, 1311
BstMAI GTCTC 1 cut(s) 82
BstMBI GATC 9 cut(s) 69, 226, 247, 540, 550, 564, 610, 885, 1308
BstMCI CGRYCG 1 cut(s) 229
BstMWI GCNNNNNNNGC 2 cut(s) 1109, 1191
BstNI CCWGG 2 cut(s) 1059, 1187
BstSCI CCNGG 2 cut(s) 1057, 1185
BstUI CGCG 1 cut(s) 467
BstV1I GCAGC 3 cut(s) 10, 1015, 1221
BstV2I GAAGAC 1 cut(s) 14
BstX2I RGATCY 1 cut(s) 610
BstYI RGATCY 1 cut(s) 610
Bsu36I CCTNAGG 1 cut(s) 1052
BtgI CCRYGG 1 cut(s) 1008
BtsCI GGATG 2 cut(s) 80, 513
BtsIMutI CAGTG 2 cut(s) 627, 670
Cac8I GCNNGC 3 cut(s) 855, 859, 1324
CaiI CAGNNNCTG 1 cut(s) 1064
CciI TCATGA 1 cut(s) 714
CfoI GCGC 5 cut(s) 28, 467, 882, 1028, 1064
Cfr13I GGNCC 6 cut(s) 266, 280, 410, 451, 840, 1255
CseI GACGC 1 cut(s) 64
Csp6I GTAC 2 cut(s) 231, 475
CviAII CATG 9 cut(s) 331, 426, 494, 548, 707, 715, 1004, 1009, 1022
CviQI GTAC 2 cut(s) 231, 475
DdeI CTNAG 4 cut(s) 1052, 1155, 1260, 1350
DpnI GATC 9 cut(s) 71, 228, 249, 542, 552, 566, 612, 887, 1310
DpnII GATC 9 cut(s) 69, 226, 247, 540, 550, 564, 610, 885, 1308
DraI TTTAAA 1 cut(s) 1140
EaeI YGGCCR 2 cut(s) 315, 855
Eam1104I CTCTTC 2 cut(s) 527, 1170
EarI CTCTTC 2 cut(s) 527, 1170
Eco130I CCWWGG 4 cut(s) 822, 836, 873, 1008
Eco147I AGGCCT 1 cut(s) 696
Eco47I GGWCC 3 cut(s) 280, 410, 1255
Eco57I CTGAAG 2 cut(s) 173, 1223
Eco81I CCTNAGG 1 cut(s) 1052
EcoO109I RGGNCCY 1 cut(s) 1255
EcoRI GAATTC 1 cut(s) 994
EcoRII CCWGG 2 cut(s) 1057, 1185
EcoT14I CCWWGG 4 cut(s) 822, 836, 873, 1008
EcoT22I ATGCAT 1 cut(s) 988
ErhI CCWWGG 4 cut(s) 822, 836, 873, 1008
Esp3I CGTCTC 1 cut(s) 82
FaeI CATG 9 cut(s) 334, 429, 497, 551, 710, 718, 1007, 1012, 1025
FalI AAGNNNNNCTT 6 cut(s) 914, 946, 1196, 1228, 1310, 1342
FaqI GGGAC 1 cut(s) 1268
FatI CATG 9 cut(s) 330, 425, 493, 547, 706, 714, 1003, 1008, 1021
FauI CCCGC 2 cut(s) 292, 460
FauNDI CATATG 1 cut(s) 1108
FbaI TGATCA 2 cut(s) 550, 1308
Fnu4HI GCNGC 5 cut(s) 24, 862, 1029, 1104, 1210
FokI GGATG 2 cut(s) 67, 500
Fsp4HI GCNGC 5 cut(s) 24, 862, 1029, 1104, 1210
FspBI CTAG 4 cut(s) 455, 597, 776, 837
GlaI GCGC 5 cut(s) 27, 466, 881, 1027, 1063
GluI GCNGC 5 cut(s) 24, 862, 1029, 1104, 1210
GsaI CCCAGC 1 cut(s) 1255
GsuI CTGGAG 1 cut(s) 73
HaeII RGCGCY 3 cut(s) 883, 1029, 1065
HapII CCGG 2 cut(s) 449, 480
HgaI GACGC 1 cut(s) 64
HhaI GCGC 5 cut(s) 28, 467, 882, 1028, 1064
Hin1II CATG 9 cut(s) 334, 429, 497, 551, 710, 718, 1007, 1012, 1025
Hin6I GCGC 5 cut(s) 26, 465, 880, 1026, 1062
HinP1I GCGC 5 cut(s) 26, 465, 880, 1026, 1062
HinfI GANTC 1 cut(s) 977
HpaII CCGG 2 cut(s) 449, 480
HphI GGTGA 3 cut(s) 520, 1201, 1231
Hpy166II GTNNAC 5 cut(s) 149, 294, 477, 535, 627
Hpy188I TCNGA 5 cut(s) 357, 577, 1086, 1156, 1242
Hpy8I GTNNAC 5 cut(s) 149, 294, 477, 535, 627
Hpy99I CGWCG 1 cut(s) 509
HpyAV CCTTC 8 cut(s) 131, 148, 690, 916, 1126, 1198, 1276, 1327
HpyCH4III ACNGT 4 cut(s) 13, 532, 622, 674
HpyCH4IV ACGT 2 cut(s) 145, 752
HpyCH4V TGCA 6 cut(s) 608, 986, 1031, 1075, 1147, 1235
HpyF10VI GCNNNNNNNGC 2 cut(s) 1109, 1191
HpyF3I CTNAG 4 cut(s) 1052, 1155, 1260, 1350
HpySE526I ACGT 2 cut(s) 145, 752
Hsp92II CATG 9 cut(s) 334, 429, 497, 551, 710, 718, 1007, 1012, 1025
HspAI GCGC 5 cut(s) 26, 465, 880, 1026, 1062
KflI GGGWCCC 1 cut(s) 1255
Ksp22I TGATCA 2 cut(s) 550, 1308
Kzo9I GATC 9 cut(s) 69, 226, 247, 540, 550, 564, 610, 885, 1308
LmnI GCTCC 2 cut(s) 586, 777
Lsp1109I GCAGC 3 cut(s) 10, 1015, 1221
LweI GCATC 1 cut(s) 393
MaeI CTAG 4 cut(s) 455, 597, 776, 837
MaeII ACGT 2 cut(s) 145, 752
MalI GATC 9 cut(s) 71, 228, 249, 542, 552, 566, 612, 887, 1310
MboI GATC 9 cut(s) 69, 226, 247, 540, 550, 564, 610, 885, 1308
MboII GAAGA 9 cut(s) 16, 19, 146, 292, 481, 514, 535, 1187, 1342
MfeI CAATTG 1 cut(s) 586
MflI RGATCY 1 cut(s) 610
MhlI GDGCHC 1 cut(s) 774
MlsI TGGCCA 1 cut(s) 857
MluCI AATT 7 cut(s) 112, 359, 368, 586, 742, 994, 1141
MluNI TGGCCA 1 cut(s) 857
Mox20I TGGCCA 1 cut(s) 857
Mph1103I ATGCAT 1 cut(s) 988
MscI TGGCCA 1 cut(s) 857
MseI TTAA 4 cut(s) 99, 651, 948, 1139
Msp20I TGGCCA 1 cut(s) 857
MspI CCGG 2 cut(s) 449, 480
MspR9I CCNGG 2 cut(s) 1059, 1187
MunI CAATTG 1 cut(s) 586
MvaI CCWGG 2 cut(s) 1059, 1187
MvnI CGCG 1 cut(s) 467
MwoI GCNNNNNNNGC 2 cut(s) 1109, 1191
NcoI CCATGG 1 cut(s) 1008
NdeI CATATG 1 cut(s) 1108
NdeII GATC 9 cut(s) 69, 226, 247, 540, 550, 564, 610, 885, 1308
NlaIII CATG 9 cut(s) 334, 429, 497, 551, 710, 718, 1007, 1012, 1025
NlaIV GGNNCC 4 cut(s) 282, 1083, 1256, 1257
NmeAIII GCCGAG 1 cut(s) 293
NsiI ATGCAT 1 cut(s) 988
NspV TTCGAA 1 cut(s) 363
PagI TCATGA 1 cut(s) 714
PceI AGGCCT 1 cut(s) 696
PcsI WCGNNNNNNNCGW 1 cut(s) 573
PfeI GAWTC 1 cut(s) 977
PflMI CCANNNNNTGG 2 cut(s) 591, 1009
PkrI GCNGC 5 cut(s) 25, 863, 1030, 1105, 1211
Ple19I CGATCG 1 cut(s) 229
Ppu21I YACGTR 1 cut(s) 146
PpuMI RGGWCCY 1 cut(s) 1255
Psp1406I AACGTT 1 cut(s) 752
Psp5II RGGWCCY 1 cut(s) 1255
Psp6I CCWGG 2 cut(s) 1057, 1185
PspFI CCCAGC 1 cut(s) 1251
PspGI CCWGG 2 cut(s) 1057, 1185
PspN4I GGNNCC 4 cut(s) 282, 1083, 1256, 1257
PspPI GGNCC 6 cut(s) 266, 280, 410, 451, 840, 1255
PspPPI RGGWCCY 1 cut(s) 1255
PstNI CAGNNNCTG 1 cut(s) 1064
PsuI RGATCY 1 cut(s) 610
PvuI CGATCG 1 cut(s) 229
RsaI GTAC 2 cut(s) 232, 476
RsaNI GTAC 2 cut(s) 231, 475
SaqAI TTAA 4 cut(s) 99, 651, 948, 1139
SatI GCNGC 5 cut(s) 24, 862, 1029, 1104, 1210
Sau3AI GATC 9 cut(s) 69, 226, 247, 540, 550, 564, 610, 885, 1308
Sau96I GGNCC 6 cut(s) 266, 280, 410, 451, 840, 1255
ScrFI CCNGG 2 cut(s) 1059, 1187
SduI GDGCHC 1 cut(s) 774
SfaNI GCATC 1 cut(s) 393
SfuI TTCGAA 1 cut(s) 363
SinI GGWCC 3 cut(s) 280, 410, 1255
Sse9I AATT 7 cut(s) 112, 359, 368, 586, 742, 994, 1141
SseBI AGGCCT 1 cut(s) 696
SsiI CCGC 5 cut(s) 285, 437, 467, 862, 1103
SspI AATATT 1 cut(s) 1151
SspMI CTAG 4 cut(s) 455, 597, 776, 837
StuI AGGCCT 1 cut(s) 696
StyD4I CCNGG 2 cut(s) 1057, 1185
StyI CCWWGG 4 cut(s) 822, 836, 873, 1008
TaaI ACNGT 4 cut(s) 13, 532, 622, 674
TaiI ACGT 2 cut(s) 148, 755
TaqI TCGA 5 cut(s) 17, 363, 766, 884, 1095
TasI AATT 7 cut(s) 112, 359, 368, 586, 742, 994, 1141
TauI GCSGC 2 cut(s) 864, 1106
TfiI GAWTC 1 cut(s) 977
Tru1I TTAA 4 cut(s) 99, 651, 948, 1139
Tru9I TTAA 4 cut(s) 99, 651, 948, 1139
TscAI CASTG 2 cut(s) 627, 677
TseI GCWGC 3 cut(s) 23, 1028, 1209
TspDTI ATGAA 9 cut(s) 17, 46, 292, 361, 502, 514, 703, 990, 1010
TspRI CASTG 2 cut(s) 627, 677
Van91I CCANNNNNTGG 2 cut(s) 591, 1009
VpaK11BI GGWCC 3 cut(s) 280, 410, 1255
XapI RAATTY 4 cut(s) 359, 368, 994, 1141
XcmI CCANNNNNNNNNTGG 2 cut(s) 850, 1010
XmaJI CCTAGG 1 cut(s) 836
XspI CTAG 4 cut(s) 455, 597, 776, 837
Zsp2I ATGCAT 1 cut(s) 988
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.