Rorug04G0314300
MYB Family

Protein of unknown function (DUF563)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0001154
Physical Location & Seq
Reverse (-)
48896987 .. 48904692
7706 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0314300.1

Sequence Viewer

Length: 2901 bp
ATGCCATCTGAAGTAATGGACATTAAGGGCCTGTCATCTTCTTCGTTCTTCTCCGAAGATTTCCCAAACGAGAGGCAGGTTGGGTTTTGGAAGTCAGATAACATGCCAGATAAACACGCCGGTGAGAAGTCACTTGCATCATCATCTCTTGAGAAGTGTCAGACGGTGAAATCTCTGGATCACCCTGATTTTTTCTTAATGCCAGAACAAAAGGTGAAACCCAGCTTCAATAGACAAGCAGTTGGGGCAGAGAGAGCCTTAAGTCATTCGTTGAATTTATCGAGAGCCGTGAGCCTTGACTCGGGAGTAATATCTAATGTAAATGTTGAGACAGCATCTTACTATGCGGAAGGTGGCAAAGTCAATATGATGGGAACGCAGTATGAGAGTAGCCTTTTCTCGAGTTCATTATCTGAGTTGTTTAGTAGGAAGTTGAGACTATCGTCAAACAATGCACAATATGGACATTCTGTTGATAGTGTTGCCTCAAACTATGAGGAAGAGGAAATTTTTGAGTCCCTTGAAGAAATGGAGGCCCAAACCATCGGAAACCTTCTCCCTGATGACGATGAGTTGCTTTCTGGAGTTACCGATGGGCTCGAGTATAATGTTCCACTCACTGCTGGGGATGATATTGAGGAGTTGGATTTTTTTAGCAGTAGTGGAGGGATGGATTTGGGAGACGATGGTTTGTCAGCTGGACTAAACAATTCTGATTGTCCTGGAGGAGTTTCGAATGGTCTGCAATGCAGTGGTTCAGTAGCTGGAGAACACCCTAATGGTGAACACCCTTCTAGGACATTGTTTGTGAGAAATATAAATAGTAACATTGAAGACTCTGAGTTGAGAACCCTGTTTGAGCAATACGGAGACATTCGGACTCTTTATACAGCCTGCAAACACCGTGGGTTTGTTATGATATCATATTATGATATTAGAGCAGCCCGGAATGCGATGAAAGCACTCCAGAACAAACCATTGAGGCGCCGGAAGCTTGACATTCATTACTCGATTCCAAAGGACAATCCTTCTGAGAAAGATGTTAATCAGGGCACTCTTGTGGTATTTAACCTTGATTCTTCTGTTTCTAATGATGAACTTCGTGAGCTTTTTGGTGTCTATGGGGAAATCAAAGAGATCCGTGAAACACCAAATAGAAGTCATCACAAGTTTATCGAATTTTATGATGTTAGAGCTGCAGAATCTGCTCTTAATGCCATGAACAGGAGTGATATAGCCGGGAAGAGGATTAAGCTTGAGCCAAGTCGTCCTGGAGGTGCAAAAAGGAGCTCGGGGCTACAGTTACCTCAAGAGTTAGAGCAGGATGATTGTGGCCTTTATTTTCAGCAGAGTAGTCCTCCTAGTAACTCTGTTACTGGTTTCTCTGGTGCAATTACATCCTCTGGCACAGATAATGGAGCTATTATGACTGTACACTCTGCAGCTCCATCTTTTGAGAACATGTTTCATGGGATCTCATCTAGTGTACCCAACAGCCTATCTTCTATGATGAGAGTTGAATCAGCAGTCAGTCAGTCTGGCCATACTGAGTCCATTCATTCAGCAAGCCCGCTGAAATTTGACATCCACGGCTCACCAGCTTTTCATCCTCATTCACTTCCAGAGTATCATAATGGTTTAACTAATGGCATCAACTGCAATTCAACAGGCAGTGTATCTGCAAGTATCAATGTCAGACCACCAGACAACAGGCACTTTACCGGAGTCTCAAGTGGGCACTCACGTGAACTTAATGATAGTGCTTTTGGATCTATGGGTAACGTGAACTGCCCTATTCCTGGACATCATTATGCATGGAACAATTCCTTTCAGTCTCAGGCTCCAGGAATGATGTGGCCAAACTCACCATCATTTGTTAATGGAATTTCGGCAGCCCATCCCCCACAGCGGATGCATGGACTTCCTAGAGCACCATCTCATATGTTAAACCCAGCAATGCCCATAAATAAACATCATGTGGGTTCAGCACCAGGGGCTAACCCAATGTGGGACCGGAGACAAGCATATGCAGGGGAATCCCCCGAGTCATCTGGATTTCATCCAGGCTCTCTTGGGAATATGAGAATGCCAAATAACTCACCTCATTCGTTGGAATTTGTTTCTCATAACATGTTTCCTCATGTTAATGGAAATGGCATGGAACTGCCAATTCCCCACAAAAATGCAGGACTCCAGGCCCATCATCAGAGGTGCATGATGTATCCTGGAAGAAGTCAGATGGTTCCTGTTATGAATTCATTTGATCAACCTACTGAACGTCCGAGAAGTCGTAGAAATGAAGGCAGCTCTAATCAGGTTGACAACAAGAAACAGTATGAACTTGATATTGACCGCATTATGCGAGGGGATGACAACAGAACAACACTTATGATAAAGAATATTCCGAACAAGTATACCTCAAAGATGCTTTTGGCTGCAATCGATGAGCGCCATCGTGGAACATATGATTTCATTTATCTGCCAATTGATTTTAAGAACAAATGCAATGTGGGGTATGCATTCATCAATATGACTGATCCGAGACAGATTGCTCCATTTTATCAGTCATTCAATGGGAAGAAATGGGAGAAGTTTAATAGTGAGAAGGTGGCATCAATTGCTTATGCTCGAATTCAAGGCAAAGCTGCTCTGATTGCACATTTCCAGAACTCAAGCCTGATGAATGAGGATAAGCGATGCCGTCCCATTCTCTTCAATACTGATGGCCCCAATGCAGGTGATCAGGTGCCTTTCCCGATGGGTGTTAATGTTCGTACGAGAACTGGAAAGTCTCGAACAACCACCCAGGAGGAGAGCCATGGAGGGAGCCCACCGAACTCAGGAGATGGGGAACATTCTTGTAATGGAGGATCATCTGCAGGTTCTAAGGACTCGGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00514 map00514
Pfam Domains
Protein Families
DUF563

Protein Analysis

966

Amino Acids

106.1

Weight (kDa)

6.02

Isoelectric Point (pI)

52.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 268 - 332 1.8e-10 RNA recognition motif
RRM_5 PF13893 350 - 426 1.7e-06 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
RRM_1 PF00076 353 - 418 1.3e-10 RNA recognition motif
RRM_2 PF04059 793 - 889 5.6e-53 RNA recognition motif 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2726
Acc36I ACCTGC 3 cut(s) 67, 2726, 2870
AccB1I GGYRCC 2 cut(s) 984, 2746
AccI GTMKAC 1 cut(s) 2414
AciI CCGC 4 cut(s) 347, 1571, 1909, 2353
AclWI GGATC 6 cut(s) 186, 1132, 1481, 1777, 2531, 2878
AcoI YGGCCR 2 cut(s) 1540, 1856
AcsI RAATTY 8 cut(s) 274, 507, 1178, 1577, 1884, 2114, 2254, 2631
AcuI CTGAAG 1 cut(s) 30
AcvI CACGTG 1 cut(s) 1745
AcyI GRCGYC 1 cut(s) 985
AfaI GTAC 3 cut(s) 1434, 1488, 2776
AfiI CCNNNNNNNGG 8 cut(s) 301, 1224, 1245, 1799, 1908, 2008, 2735, 2840
AflII CTTAAG 1 cut(s) 259
AflIII ACRYGT 2 cut(s) 1461, 2130
AgsI TTSAA 9 cut(s) 229, 274, 524, 833, 1520, 1665, 2572, 2636, 2716
AjnI CCWGG 9 cut(s) 721, 1270, 1798, 1843, 1990, 2062, 2193, 2224, 2805
AleI CACNNNNGTG 3 cut(s) 120, 1058, 1743
Alw21I GWGCWC 2 cut(s) 1292, 1933
Alw26I GTCTC 9 cut(s) 323, 430, 675, 864, 1732, 1839, 2011, 2536, 2796
AlwI GGATC 6 cut(s) 186, 1132, 1481, 1777, 2531, 2878
AlwNI CAGNNNCTG 2 cut(s) 764, 1205
Ama87I CYCGRG 5 cut(s) 301, 400, 599, 1291, 2042
AoxI GGCC 7 cut(s) 28, 534, 1333, 1540, 1856, 2196, 2725
ApeKI GCWGC 7 cut(s) 941, 1196, 1442, 1892, 2304, 2435, 2645
ApoI RAATTY 8 cut(s) 274, 507, 1178, 1577, 1884, 2114, 2254, 2631
AspLEI GCGC 2 cut(s) 987, 2451
AspS9I GGNCC 5 cut(s) 28, 535, 2011, 2197, 2726
AsuC2I CCSGG 2 cut(s) 946, 1240
AsuHPI GGTGA 9 cut(s) 134, 173, 178, 226, 794, 1587, 1857, 2091, 2750
AsuII TTCGAA 1 cut(s) 734
AvaI CYCGRG 5 cut(s) 301, 400, 599, 1291, 2042
AvaII GGWCC 1 cut(s) 2011
BaeGI GKGCMC 2 cut(s) 1055, 1740
BalI TGGCCA 2 cut(s) 1542, 1858
BanI GGYRCC 2 cut(s) 984, 2746
BanII GRGCYC 3 cut(s) 600, 1292, 2831
BbrPI CACGTG 1 cut(s) 1745
BbsI GAAGAC 1 cut(s) 840
Bbv12I GWGCWC 2 cut(s) 1292, 1933
BbvI GCAGC 7 cut(s) 953, 1183, 1454, 1904, 2316, 2422, 2632
BceAI ACGGC 3 cut(s) 272, 1606, 2685
BcgI CGANNNNNNTGC 2 cut(s) 724, 758
BciT130I CCWGG 9 cut(s) 723, 1272, 1800, 1845, 1992, 2064, 2195, 2226, 2807
BciVI GTATCC 1 cut(s) 2232
BclI TGATCA 2 cut(s) 2263, 2740
BcnI CCSGG 2 cut(s) 946, 1240
BcoDI GTCTC 9 cut(s) 323, 430, 675, 864, 1732, 1839, 2011, 2536, 2796
BfaI CTAG 4 cut(s) 795, 1362, 1482, 1926
BfmI CTRYAG 4 cut(s) 1197, 1298, 1440, 2877
BfoI RGCGCY 2 cut(s) 988, 2452
BfrI CTTAAG 1 cut(s) 259
BfuAI ACCTGC 3 cut(s) 67, 2726, 2870
BfuI GTATCC 1 cut(s) 2232
BisI GCNGC 7 cut(s) 942, 1197, 1443, 1893, 2305, 2436, 2646
BlsI GCNGC 7 cut(s) 943, 1198, 1444, 1894, 2306, 2437, 2647
Bme18I GGWCC 1 cut(s) 2011
BmeT110I CYCGRG 5 cut(s) 301, 400, 599, 1291, 2042
BmgT120I GGNCC 5 cut(s) 28, 535, 2011, 2197, 2726
BmiI GGNNCC 7 cut(s) 986, 1842, 2012, 2244, 2728, 2748, 2828
BmsI GCATC 7 cut(s) 146, 344, 1659, 1902, 2415, 2621, 2687
BoxI GACNNNNGTC 1 cut(s) 442
BpiI GAAGAC 1 cut(s) 840
BplI GAGNNNNNCTC 2 cut(s) 1342, 1374
BpmI CTGGAG 7 cut(s) 603, 744, 786, 950, 1293, 1827, 2177
Bpu14I TTCGAA 1 cut(s) 734
BpuEI CTTGAG 5 cut(s) 170, 1277, 1293, 1714, 2656
BpuMI CCSGG 2 cut(s) 946, 1240
Bsa29I ATCGAT 1 cut(s) 2442
BsaAI YACGTR 1 cut(s) 1745
BsaBI GATNNNNATC 1 cut(s) 1044
BsaHI GRCGYC 1 cut(s) 985
BsaJI CCNNGG 5 cut(s) 904, 1588, 1991, 2805, 2818
BsaWI WCCGGW 2 cut(s) 1721, 2013
Bsc4I CCNNNNNNNGG 8 cut(s) 301, 1224, 1245, 1799, 1908, 2008, 2735, 2840
Bse118I RCCGGY 1 cut(s) 119
Bse1I ACTGG 2 cut(s) 1381, 2788
Bse3DI GCAATG 3 cut(s) 752, 1962, 2512
Bse8I GATNNNNATC 1 cut(s) 1044
BseBI CCWGG 9 cut(s) 723, 1272, 1800, 1845, 1992, 2064, 2195, 2226, 2807
BseCI ATCGAT 1 cut(s) 2442
BseDI CCNNGG 5 cut(s) 904, 1588, 1991, 2805, 2818
BseJI GATNNNNATC 1 cut(s) 1044
BseLI CCNNNNNNNGG 8 cut(s) 301, 1224, 1245, 1799, 1908, 2008, 2735, 2840
BseMI GCAATG 3 cut(s) 752, 1962, 2512
BseMII CTCAG 6 cut(s) 405, 831, 1023, 1539, 1850, 2853
BseNI ACTGG 2 cut(s) 1381, 2788
BseRI GAGGAG 3 cut(s) 653, 741, 2825
BseSI GKGCMC 2 cut(s) 1055, 1740
BseXI GCAGC 7 cut(s) 953, 1183, 1454, 1904, 2316, 2422, 2632
BseYI CCCAGC 3 cut(s) 221, 623, 1951
BshFI GGCC 7 cut(s) 30, 536, 1335, 1542, 1858, 2198, 2727
BshNI GGYRCC 2 cut(s) 984, 2746
BshVI ATCGAT 1 cut(s) 2442
BsiHKAI GWGCWC 2 cut(s) 1292, 1933
BsiHKCI CYCGRG 5 cut(s) 301, 400, 599, 1291, 2042
BsiSI CCGG 6 cut(s) 120, 946, 988, 1239, 1722, 2014
BsiWI CGTACG 1 cut(s) 2774
BslFI GGGAC 3 cut(s) 502, 2024, 2688
BslI CCNNNNNNNGG 8 cut(s) 301, 1224, 1245, 1799, 1908, 2008, 2735, 2840
BsmAI GTCTC 9 cut(s) 323, 430, 675, 864, 1732, 1839, 2011, 2536, 2796
BsmBI CGTCTC 1 cut(s) 675
BsmFI GGGAC 3 cut(s) 502, 2024, 2688
BsmI GAATGC 3 cut(s) 955, 2091, 2519
BsnI GGCC 7 cut(s) 30, 536, 1335, 1542, 1858, 2198, 2727
BsoBI CYCGRG 5 cut(s) 301, 400, 599, 1291, 2042
Bsp119I TTCGAA 1 cut(s) 734
Bsp1286I GDGCHC 6 cut(s) 600, 1055, 1292, 1740, 1933, 2831
Bsp1407I TGTACA 1 cut(s) 1432
Bsp143I GATC 8 cut(s) 178, 1137, 1473, 1769, 2263, 2536, 2740, 2870
Bsp19I CCATGG 1 cut(s) 2818
BspACI CCGC 4 cut(s) 347, 1571, 1909, 2353
BspANI GGCC 7 cut(s) 30, 536, 1335, 1542, 1858, 2198, 2727
BspCNI CTCAG 6 cut(s) 406, 832, 1024, 1540, 1849, 2852
BspDI ATCGAT 1 cut(s) 2442
BspLI GGNNCC 7 cut(s) 986, 1842, 2012, 2244, 2728, 2748, 2828
BspMAI CTGCAG 3 cut(s) 1201, 1444, 2881
BspMI ACCTGC 3 cut(s) 67, 2726, 2870
BspPI GGATC 6 cut(s) 186, 1132, 1481, 1777, 2531, 2878
BspT104I TTCGAA 1 cut(s) 734
BspT107I GGYRCC 2 cut(s) 984, 2746
BspTI CTTAAG 1 cut(s) 259
BsrDI GCAATG 3 cut(s) 752, 1962, 2512
BsrFI RCCGGY 1 cut(s) 119
BsrGI TGTACA 1 cut(s) 1432
BsrI ACTGG 2 cut(s) 1381, 2788
BssAI RCCGGY 1 cut(s) 119
BssECI CCNNGG 5 cut(s) 904, 1588, 1991, 2805, 2818
BssMI GATC 8 cut(s) 178, 1137, 1473, 1769, 2263, 2536, 2740, 2870
BssNAI GTATAC 1 cut(s) 2415
BssNI GRCGYC 1 cut(s) 985
BssT1I CCWWGG 1 cut(s) 2818
Bst1107I GTATAC 1 cut(s) 2415
Bst2UI CCWGG 9 cut(s) 723, 1272, 1800, 1845, 1992, 2064, 2195, 2226, 2807
Bst4CI ACNGT 5 cut(s) 166, 905, 1302, 1432, 2334
Bst6I CTCTTC 3 cut(s) 495, 1238, 2717
BstACI GRCGYC 1 cut(s) 985
BstAFI CTTAAG 1 cut(s) 259
BstAPI GCANNNNNTGC 3 cut(s) 1205, 1656, 2618
BstAUI TGTACA 1 cut(s) 1432
BstBAI YACGTR 1 cut(s) 1745
BstBI TTCGAA 1 cut(s) 734
BstC8I GCNNGC 3 cut(s) 895, 1567, 1571
BstDEI CTNAG 7 cut(s) 414, 840, 1032, 1548, 1836, 2839, 2886
BstDSI CCRYGG 3 cut(s) 904, 1588, 2818
BstH2I RGCGCY 2 cut(s) 988, 2452
BstHHI GCGC 2 cut(s) 987, 2451
BstKTI GATC 8 cut(s) 181, 1140, 1476, 1772, 2266, 2539, 2743, 2873
BstMAI GTCTC 9 cut(s) 323, 430, 675, 864, 1732, 1839, 2011, 2536, 2796
BstMBI GATC 8 cut(s) 178, 1137, 1473, 1769, 2263, 2536, 2740, 2870
BstNI CCWGG 9 cut(s) 723, 1272, 1800, 1845, 1992, 2064, 2195, 2226, 2807
BstNSI RCATGY 3 cut(s) 106, 1465, 2134
BstPAI GACNNNNGTC 1 cut(s) 442
BstSFI CTRYAG 4 cut(s) 1197, 1298, 1440, 2877
BstSLI GKGCMC 2 cut(s) 1055, 1740
BstV1I GCAGC 7 cut(s) 953, 1183, 1454, 1904, 2316, 2422, 2632
BstV2I GAAGAC 1 cut(s) 840
BstX2I RGATCY 3 cut(s) 1137, 1473, 1769
BstYI RGATCY 3 cut(s) 1137, 1473, 1769
BstZ17I GTATAC 1 cut(s) 2415
Bsu15I ATCGAT 1 cut(s) 2442
BsuI GTATCC 1 cut(s) 2232
BsuRI GGCC 7 cut(s) 30, 536, 1335, 1542, 1858, 2198, 2727
BsuTUI ATCGAT 1 cut(s) 2442
BtgI CCRYGG 3 cut(s) 904, 1588, 2818
BtgZI GCGATG 2 cut(s) 968, 2710
BtsI GCAGTG 3 cut(s) 618, 757, 1678
BtsIMutI CAGTG 3 cut(s) 618, 757, 1678
BveI ACCTGC 3 cut(s) 67, 2726, 2870
Cac8I GCNNGC 3 cut(s) 895, 1567, 1571
CaiI CAGNNNCTG 2 cut(s) 764, 1205
CfoI GCGC 2 cut(s) 987, 2451
Cfr10I RCCGGY 1 cut(s) 119
Cfr13I GGNCC 5 cut(s) 28, 535, 2011, 2197, 2726
ClaI ATCGAT 1 cut(s) 2442
Csp6I GTAC 3 cut(s) 1433, 1487, 2775
CspCI CAANNNNNGTGG 2 cut(s) 886, 921
CviQI GTAC 3 cut(s) 1433, 1487, 2775
DdeI CTNAG 7 cut(s) 414, 840, 1032, 1548, 1836, 2839, 2886
DinI GGCGCC 1 cut(s) 986
DpnI GATC 8 cut(s) 180, 1139, 1475, 1771, 2265, 2538, 2742, 2872
DpnII GATC 8 cut(s) 178, 1137, 1473, 1769, 2263, 2536, 2740, 2870
EaeI YGGCCR 2 cut(s) 1540, 1856
Eam1104I CTCTTC 3 cut(s) 495, 1238, 2717
EarI CTCTTC 3 cut(s) 495, 1238, 2717
Ecl136II GAGCTC 1 cut(s) 1290
Eco130I CCWWGG 1 cut(s) 2818
Eco24I GRGCYC 3 cut(s) 600, 1292, 2831
Eco32I GATATC 1 cut(s) 921
Eco47I GGWCC 1 cut(s) 2011
Eco53kI GAGCTC 1 cut(s) 1290
Eco57I CTGAAG 1 cut(s) 30
Eco72I CACGTG 1 cut(s) 1745
Eco88I CYCGRG 5 cut(s) 301, 400, 599, 1291, 2042
EcoICRI GAGCTC 1 cut(s) 1290
EcoO109I RGGNCCY 1 cut(s) 28
EcoRI GAATTC 2 cut(s) 2254, 2631
EcoRII CCWGG 9 cut(s) 721, 1270, 1798, 1843, 1990, 2062, 2193, 2224, 2805
EcoRV GATATC 1 cut(s) 921
EcoT14I CCWWGG 1 cut(s) 2818
EcoT22I ATGCAT 3 cut(s) 1816, 1917, 2521
EcoT38I GRGCYC 3 cut(s) 600, 1292, 2831
EgeI GGCGCC 1 cut(s) 986
EheI GGCGCC 1 cut(s) 986
ErhI CCWWGG 1 cut(s) 2818
Esp3I CGTCTC 1 cut(s) 675
FaqI GGGAC 3 cut(s) 502, 2024, 2688
FauI CCCGC 1 cut(s) 1578
FauNDI CATATG 3 cut(s) 1941, 2026, 2464
FbaI TGATCA 2 cut(s) 2263, 2740
FblI GTMKAC 1 cut(s) 2414
Fnu4HI GCNGC 7 cut(s) 942, 1197, 1443, 1893, 2305, 2436, 2646
FriOI GRGCYC 3 cut(s) 600, 1292, 2831
Fsp4HI GCNGC 7 cut(s) 942, 1197, 1443, 1893, 2305, 2436, 2646
FspBI CTAG 4 cut(s) 795, 1362, 1482, 1926
GlaI GCGC 2 cut(s) 986, 2450
GluI GCNGC 7 cut(s) 942, 1197, 1443, 1893, 2305, 2436, 2646
GsaI CCCAGC 3 cut(s) 225, 627, 1955
GsuI CTGGAG 7 cut(s) 603, 744, 786, 950, 1293, 1827, 2177
HaeII RGCGCY 2 cut(s) 988, 2452
HaeIII GGCC 7 cut(s) 30, 536, 1335, 1542, 1858, 2198, 2727
HapII CCGG 6 cut(s) 120, 946, 988, 1239, 1722, 2014
HhaI GCGC 2 cut(s) 987, 2451
Hin1I GRCGYC 1 cut(s) 985
Hin6I GCGC 2 cut(s) 985, 2449
HinP1I GCGC 2 cut(s) 985, 2449
HincII GTYRAC 1 cut(s) 2320
HindII GTYRAC 1 cut(s) 2320
HindIII AAGCTT 2 cut(s) 992, 1253
HpaII CCGG 6 cut(s) 120, 946, 988, 1239, 1722, 2014
HphI GGTGA 9 cut(s) 134, 173, 178, 226, 794, 1587, 1857, 2091, 2750
Hpy166II GTNNAC 7 cut(s) 785, 1435, 1487, 1748, 1786, 2320, 2415
Hpy8I GTNNAC 7 cut(s) 785, 1435, 1487, 1748, 1786, 2320, 2415
HpyAV CCTTC 6 cut(s) 344, 563, 801, 1038, 2294, 2599
HpyCH4III ACNGT 5 cut(s) 166, 905, 1302, 1432, 2334
HpyCH4IV ACGT 3 cut(s) 1744, 1782, 2278
HpyF3I CTNAG 7 cut(s) 414, 840, 1032, 1548, 1836, 2839, 2886
HpySE526I ACGT 3 cut(s) 1744, 1782, 2278
Hsp92I GRCGYC 1 cut(s) 985
HspAI GCGC 2 cut(s) 985, 2449
KasI GGCGCC 1 cut(s) 984
Ksp22I TGATCA 2 cut(s) 2263, 2740
Kzo9I GATC 8 cut(s) 178, 1137, 1473, 1769, 2263, 2536, 2740, 2870
LmnI GCTCC 6 cut(s) 1287, 1418, 1450, 1846, 2557, 2826
Lsp1109I GCAGC 7 cut(s) 953, 1183, 1454, 1904, 2316, 2422, 2632
LweI GCATC 7 cut(s) 146, 344, 1659, 1902, 2415, 2621, 2687
MaeI CTAG 4 cut(s) 795, 1362, 1482, 1926
MaeII ACGT 3 cut(s) 1744, 1782, 2278
MaeIII GTNAC 7 cut(s) 129, 586, 824, 1302, 1364, 1372, 1778
MalI GATC 8 cut(s) 180, 1139, 1475, 1771, 2265, 2538, 2742, 2872
MboI GATC 8 cut(s) 178, 1137, 1473, 1769, 2263, 2536, 2740, 2870
MfeI CAATTG 2 cut(s) 2484, 2616
MflI RGATCY 3 cut(s) 1137, 1473, 1769
MhlI GDGCHC 6 cut(s) 600, 1055, 1292, 1740, 1933, 2831
MlsI TGGCCA 2 cut(s) 1542, 1858
MluNI TGGCCA 2 cut(s) 1542, 1858
Mly113I GGCGCC 1 cut(s) 985
MlyI GAGTC 9 cut(s) 293, 524, 830, 874, 1559, 1734, 2054, 2184, 2885
MmeI TCCRAC 2 cut(s) 624, 2091
Mox20I TGGCCA 2 cut(s) 1542, 1858
Mph1103I ATGCAT 3 cut(s) 1816, 1917, 2521
MscI TGGCCA 2 cut(s) 1542, 1858
MslI CAYNNNNRTG 8 cut(s) 120, 777, 1058, 1743, 1809, 2145, 2181, 2528
Msp20I TGGCCA 2 cut(s) 1542, 1858
MspA1I CMGCKG 3 cut(s) 698, 1573, 1909
MspCI CTTAAG 1 cut(s) 259
MspI CCGG 6 cut(s) 120, 946, 988, 1239, 1722, 2014
MunI CAATTG 2 cut(s) 2484, 2616
Mva1269I GAATGC 3 cut(s) 955, 2091, 2519
MvaI CCWGG 9 cut(s) 723, 1272, 1800, 1845, 1992, 2064, 2195, 2226, 2807
NarI GGCGCC 1 cut(s) 985
NciI CCSGG 2 cut(s) 946, 1240
NcoI CCATGG 1 cut(s) 2818
NdeI CATATG 3 cut(s) 1941, 2026, 2464
NdeII GATC 8 cut(s) 178, 1137, 1473, 1769, 2263, 2536, 2740, 2870
NlaIV GGNNCC 7 cut(s) 986, 1842, 2012, 2244, 2728, 2748, 2828
NmuCI GTSAC 1 cut(s) 129
NsiI ATGCAT 3 cut(s) 1816, 1917, 2521
NspI RCATGY 3 cut(s) 106, 1465, 2134
NspV TTCGAA 1 cut(s) 734
OliI CACNNNNGTG 3 cut(s) 120, 1058, 1743
PaeR7I CTCGAG 2 cut(s) 400, 599
PaqCI CACCTGC 1 cut(s) 2726
PciI ACATGT 2 cut(s) 1461, 2130
PctI GAATGC 3 cut(s) 955, 2091, 2519
PfeI GAWTC 5 cut(s) 1012, 1076, 1202, 1520, 2036
Pfl23II CGTACG 1 cut(s) 2774
PfoI TCCNGGA 5 cut(s) 721, 1270, 1798, 1843, 2224
PkrI GCNGC 7 cut(s) 943, 1198, 1444, 1894, 2306, 2437, 2647
PleI GAGTC 9 cut(s) 293, 523, 830, 874, 1558, 1733, 2053, 2184, 2885
PluTI GGCGCC 1 cut(s) 988
PmaCI CACGTG 1 cut(s) 1745
PmlI CACGTG 1 cut(s) 1745
PpsI GAGTC 9 cut(s) 293, 523, 830, 874, 1558, 1733, 2053, 2184, 2885
Ppu21I YACGTR 1 cut(s) 1745
PscI ACATGT 2 cut(s) 1461, 2130
PshAI GACNNNNGTC 1 cut(s) 442
Psp124BI GAGCTC 1 cut(s) 1292
Psp6I CCWGG 9 cut(s) 721, 1270, 1798, 1843, 1990, 2062, 2193, 2224, 2805
PspCI CACGTG 1 cut(s) 1745
PspFI CCCAGC 3 cut(s) 221, 623, 1951
PspGI CCWGG 9 cut(s) 721, 1270, 1798, 1843, 1990, 2062, 2193, 2224, 2805
PspLI CGTACG 1 cut(s) 2774
PspN4I GGNNCC 7 cut(s) 986, 1842, 2012, 2244, 2728, 2748, 2828
PspPI GGNCC 5 cut(s) 28, 535, 2011, 2197, 2726
PspXI VCTCGAGB 1 cut(s) 599
PstI CTGCAG 3 cut(s) 1201, 1444, 2881
PstNI CAGNNNCTG 2 cut(s) 764, 1205
PsuI RGATCY 3 cut(s) 1137, 1473, 1769
PvuII CAGCTG 1 cut(s) 698
RsaI GTAC 3 cut(s) 1434, 1488, 2776
RsaNI GTAC 3 cut(s) 1433, 1487, 2775
RseI CAYNNNNRTG 8 cut(s) 120, 777, 1058, 1743, 1809, 2145, 2181, 2528
SacI GAGCTC 1 cut(s) 1292
SatI GCNGC 7 cut(s) 942, 1197, 1443, 1893, 2305, 2436, 2646
Sau3AI GATC 8 cut(s) 178, 1137, 1473, 1769, 2263, 2536, 2740, 2870
Sau96I GGNCC 5 cut(s) 28, 535, 2011, 2197, 2726
SchI GAGTC 9 cut(s) 293, 524, 830, 874, 1559, 1734, 2054, 2184, 2885
SduI GDGCHC 6 cut(s) 600, 1055, 1292, 1740, 1933, 2831
SfaNI GCATC 7 cut(s) 146, 344, 1659, 1902, 2415, 2621, 2687
SfcI CTRYAG 4 cut(s) 1197, 1298, 1440, 2877
SfoI GGCGCC 1 cut(s) 986
Sfr274I CTCGAG 2 cut(s) 400, 599
SfuI TTCGAA 1 cut(s) 734
SgrAI CRCCGGYG 1 cut(s) 119
SinI GGWCC 1 cut(s) 2011
SlaI CTCGAG 2 cut(s) 400, 599
SmiMI CAYNNNNRTG 8 cut(s) 120, 777, 1058, 1743, 1809, 2145, 2181, 2528
SmlI CTYRAG 8 cut(s) 149, 259, 400, 599, 1256, 1308, 1729, 2671
SmoI CTYRAG 8 cut(s) 149, 259, 400, 599, 1256, 1308, 1729, 2671
SsiI CCGC 4 cut(s) 347, 1571, 1909, 2353
SspDI GGCGCC 1 cut(s) 984
SspI AATATT 1 cut(s) 2401
SspMI CTAG 4 cut(s) 795, 1362, 1482, 1926
SstI GAGCTC 1 cut(s) 1292
StyI CCWWGG 1 cut(s) 2818
TaaI ACNGT 5 cut(s) 166, 905, 1302, 1432, 2334
TaiI ACGT 3 cut(s) 1747, 1785, 2281
TaqI TCGA 9 cut(s) 281, 401, 600, 734, 1010, 1176, 2442, 2629, 2794
TatI WGTACW 1 cut(s) 1432
TfiI GAWTC 5 cut(s) 1012, 1076, 1202, 1520, 2036
TscAI CASTG 3 cut(s) 625, 757, 1678
TseFI GTSAC 1 cut(s) 129
TseI GCWGC 7 cut(s) 941, 1196, 1442, 1892, 2304, 2435, 2645
Tsp45I GTSAC 1 cut(s) 129
TspGWI ACGGA 2 cut(s) 882, 1130
TspRI CASTG 3 cut(s) 625, 757, 1678
Vha464I CTTAAG 1 cut(s) 259
VpaK11BI GGWCC 1 cut(s) 2011
XapI RAATTY 8 cut(s) 274, 507, 1178, 1577, 1884, 2114, 2254, 2631
XceI RCATGY 3 cut(s) 106, 1465, 2134
XcmI CCANNNNNNNNNTGG 1 cut(s) 1851
XhoI CTCGAG 2 cut(s) 400, 599
XmiI GTMKAC 1 cut(s) 2414
XspI CTAG 4 cut(s) 795, 1362, 1482, 1926
Zsp2I ATGCAT 3 cut(s) 1816, 1917, 2521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.