Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002107

Physical Location & Seq

Genomic Coordinates Forward (+)

8097420 .. 8099393

Gene Structure 1974 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G18690.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 969 bp

ATGGCTCGATTTTCCTTCTTGAATGTTGTAAAGGATGTTGTGGCTATTCTAAATGAATCCCGCAAACTGTTTCTCAAGAACAAAAAGTTGATGTTCTCAGTCTTGGTATTCCCTCTCTTACTCAATTGTTTAGTTTACTTCTTGAACATCTTTGTCATCGTACCGGAGATCACAAACTTGATCCTTGAAGCAAGTTTGTTGCCTTCGACAGATCCAACCTCCCCGGAATACGCAGCCCGCCTTATGAGAGTCTTTACAGATTTTCGCCAATTTGTGGGTTCTTCATACATTTTCGCGGCTGTCTCCTCCATCATCAACCTCTTTTCTGTTCTAGTCATCGTCCACGCATCGGCTATTACTCTTAAAGATGAAAACTTCAATATCAAAGATTTTCCTGTTCTGAGCCTTAAATCTTGGAAGGGACCTCTTGTGACATATTTCTACATTGCTCTTTTCAGTCTTGGCTTTGGCTTCCTCTTCTTTATAATCCTTTGTCCTATCCTTTTGTTCTCTATAAAATCCGGTTCCGTGGAAAATATCGGTTTCTTGGCGGTCGAGGCTGGTGTTTTATTGATTATATTCACCGTCTCTCAGTCCTATTTTGCTATCTATTGGAACTTATCTATGGTCATATCGATACTAGAGGAAAGTTATGGGTTCCAAGCTTTGGGGAAAGCAGCAAAGATTGTTAAAGGGATGAAGACAAAACTGTTTCTCTTGAATCTTTTCTTTGGTTTATTGGCATCCGGATTAGCTCAAATCTTGCAGCTGATCAATATGGGAAGATCGTTAGCGGTTACCTTAACCACAGGTTTTGTCCTTGTGTGTTTGGTCTTTGCGGTGAGGATGTTTCAGCTTGTGACTTACACCGTTGCATATTTCCAATGTAAAAGCCTCCAAGGCAGAGACGTTGAGTCGCTCAGGGATGTGGAATATATGGCATTGTCTTCCACTACTCTCACGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

322

Amino Acids

36.04

Weight (kDa)

9.07

Isoelectric Point (pI)

34.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002107)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18680 AT2G18690 AT2G18690
malus_domestica	MD16G1263500.v1.1
prunus_persica	Prupe.1G095700_v2.0.a1 Prupe.1G095800_v2.0.a1 Prupe.1G095900_v2.0.a1
pyrus_communis	pycom16g23240
rosa_chinensis	RchiOBHm_Chr4g0404701 RchiOBHm_Chr4g0404711 RchiOBHm_Chr4g0404721
rosa_laevigata	RLG00000008905 RLG00000008906 RLG00000008908 RLG00000008911 RLG00000008912 RLG00000008914
rosa_multiflora	Rmu_sc0001179.1_g000050 Rmu_sc0001179.1_g000051 Rmu_sc0004312.1_g000001 Rmu_sc0005685.1_g000009
rosa_roxburghii	Rroxscaffold_1G00017040 Rroxscaffold_5G00348900 Rroxscaffold_5G00348910
rosa_rugosa	Rorug04G0048900 Rorug04G0049000
rosa_samantha	Rh4AG124600 Rh4AG124700 Rh4BG118800 Rh4BG118900 Rh4BG119000 Rh4CG132800 Rh4CG132900 Rh4CG133000 Rh4DG117900 Rh4DG118000 Rh4DG118100 Rh5AG418500 Rh5BG434300 Rh5CG457500 Rh5DG447400
rosa_wichuraiana	Rw4G010090 Rw4G010100 Rw5G039310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	485
AccB7I	CCANNNNNTGG	2 cut(s)	274, 667
AccII	CGCG	1 cut(s)	296
AccIII	TCCGGA	1 cut(s)	746
AciI	CCGC	6 cut(s)	61, 238, 296, 551, 794, 839
AclWI	GGATC	2 cut(s)	175, 206
AfaI	GTAC	1 cut(s)	162
AfiI	CCNNNNNNNGG	3 cut(s)	274, 349, 667
AgsI	TTSAA	5 cut(s)	22, 145, 188, 379, 721
AhdI	GACNNNNNGTC	1 cut(s)	913
AluBI	AGCT	4 cut(s)	665, 755, 769, 856
AluI	AGCT	4 cut(s)	665, 755, 769, 856
Alw26I	GTCTC	3 cut(s)	307, 592, 900
AlwI	GGATC	2 cut(s)	175, 206
Aor13HI	TCCGGA	1 cut(s)	746
ApeKI	GCWGC	3 cut(s)	233, 677, 766
Asp700I	GAANNNNTTC	1 cut(s)	725
AspS9I	GGNCC	1 cut(s)	422
AsuC2I	CCSGG	1 cut(s)	224
AsuHPI	GGTGA	2 cut(s)	574, 853
AvaII	GGWCC	1 cut(s)	422
BbsI	GAAGAC	2 cut(s)	707, 939
BbvI	GCAGC	3 cut(s)	245, 689, 778
BccI	CCATC	1 cut(s)	317
BclI	TGATCA	1 cut(s)	771
BcnI	CCSGG	1 cut(s)	224
BcoDI	GTCTC	3 cut(s)	307, 592, 900
BfaI	CTAG	2 cut(s)	332, 641
BglI	GCCNNNNNGGC	1 cut(s)	900
BisI	GCNGC	4 cut(s)	234, 297, 678, 767
BlsI	GCNGC	4 cut(s)	235, 298, 679, 768
Bme1390I	CCNGG	1 cut(s)	224
Bme18I	GGWCC	1 cut(s)	422
BmeRI	GACNNNNNGTC	1 cut(s)	913
BmgT120I	GGNCC	1 cut(s)	422
BmiI	GGNNCC	3 cut(s)	423, 526, 659
BmrFI	CCNGG	1 cut(s)	224
BmsI	GCATC	2 cut(s)	356, 752
BpiI	GAAGAC	2 cut(s)	707, 939
Bpu10I	CCTNAGC	1 cut(s)	920
BpuEI	CTTGAG	1 cut(s)	59
BpuMI	CCSGG	1 cut(s)	224
Bsa29I	ATCGAT	1 cut(s)	635
BsaJI	CCNNGG	3 cut(s)	222, 528, 898
BsaWI	WCCGGW	3 cut(s)	163, 521, 746
Bsc4I	CCNNNNNNNGG	3 cut(s)	274, 349, 667
Bse3DI	GCAATG	1 cut(s)	444
BseAI	TCCGGA	1 cut(s)	746
BseCI	ATCGAT	1 cut(s)	635
BseDI	CCNNGG	3 cut(s)	222, 528, 898
BseGI	GGATG	5 cut(s)	40, 702, 743, 852, 931
BseLI	CCNNNNNNNGG	3 cut(s)	274, 349, 667
BseMI	GCAATG	1 cut(s)	444
BseMII	CTCAG	4 cut(s)	111, 392, 605, 934
BseRI	GAGGAG	1 cut(s)	295
BseXI	GCAGC	3 cut(s)	245, 689, 778
Bsh1236I	CGCG	1 cut(s)	296
Bsh1285I	CGRYCG	1 cut(s)	555
BshVI	ATCGAT	1 cut(s)	635
BsiEI	CGRYCG	1 cut(s)	555
BsiSI	CCGG	4 cut(s)	164, 224, 522, 747
BslFI	GGGAC	1 cut(s)	435
BslI	CCNNNNNNNGG	3 cut(s)	274, 349, 667
BsmAI	GTCTC	3 cut(s)	307, 592, 900
BsmBI	CGTCTC	2 cut(s)	592, 900
BsmFI	GGGAC	1 cut(s)	435
Bsp13I	TCCGGA	1 cut(s)	746
Bsp143I	GATC	5 cut(s)	168, 180, 211, 771, 785
BspACI	CCGC	6 cut(s)	61, 238, 296, 551, 794, 839
BspCNI	CTCAG	4 cut(s)	110, 393, 604, 933
BspDI	ATCGAT	1 cut(s)	635
BspEI	TCCGGA	1 cut(s)	746
BspFNI	CGCG	1 cut(s)	296
BspLI	GGNNCC	3 cut(s)	423, 526, 659
BspPI	GGATC	2 cut(s)	175, 206
BsrDI	GCAATG	1 cut(s)	444
BssECI	CCNNGG	3 cut(s)	222, 528, 898
BssMI	GATC	5 cut(s)	168, 180, 211, 771, 785
BssT1I	CCWWGG	1 cut(s)	898
Bst4CI	ACNGT	4 cut(s)	69, 586, 711, 871
Bst6I	CTCTTC	1 cut(s)	482
BstC8I	GCNNGC	1 cut(s)	238
BstDEI	CTNAG	4 cut(s)	97, 401, 591, 920
BstDSI	CCRYGG	1 cut(s)	528
BstEII	GGTNACC	1 cut(s)	796
BstF5I	GGATG	5 cut(s)	40, 702, 743, 852, 931
BstFNI	CGCG	1 cut(s)	296
BstKTI	GATC	5 cut(s)	171, 183, 214, 774, 788
BstMAI	GTCTC	3 cut(s)	307, 592, 900
BstMBI	GATC	5 cut(s)	168, 180, 211, 771, 785
BstMCI	CGRYCG	1 cut(s)	555
BstMWI	GCNNNNNNNGC	2 cut(s)	557, 900
BstPI	GGTNACC	1 cut(s)	796
BstSCI	CCNGG	1 cut(s)	222
BstUI	CGCG	1 cut(s)	296
BstV1I	GCAGC	3 cut(s)	245, 689, 778
BstV2I	GAAGAC	2 cut(s)	707, 939
BstX2I	RGATCY	1 cut(s)	211
BstYI	RGATCY	1 cut(s)	211
Bsu15I	ATCGAT	1 cut(s)	635
BsuTUI	ATCGAT	1 cut(s)	635
BtgI	CCRYGG	1 cut(s)	528
BtsCI	GGATG	5 cut(s)	40, 702, 743, 852, 931
Cac8I	GCNNGC	1 cut(s)	238
Cfr13I	GGNCC	1 cut(s)	422
ClaI	ATCGAT	1 cut(s)	635
Csp6I	GTAC	1 cut(s)	161
CspCI	CAANNNNNGTGG	2 cut(s)	796, 831
CviQI	GTAC	1 cut(s)	161
DdeI	CTNAG	4 cut(s)	97, 401, 591, 920
DpnI	GATC	5 cut(s)	170, 182, 213, 773, 787
DpnII	GATC	5 cut(s)	168, 180, 211, 771, 785
DriI	GACNNNNNGTC	1 cut(s)	913
Eam1104I	CTCTTC	1 cut(s)	482
Eam1105I	GACNNNNNGTC	1 cut(s)	913
EarI	CTCTTC	1 cut(s)	482
Eco130I	CCWWGG	1 cut(s)	898
Eco47I	GGWCC	1 cut(s)	422
Eco91I	GGTNACC	1 cut(s)	796
EcoO109I	RGGNCCY	1 cut(s)	422
EcoO65I	GGTNACC	1 cut(s)	796
EcoT14I	CCWWGG	1 cut(s)	898
ErhI	CCWWGG	1 cut(s)	898
Esp3I	CGTCTC	2 cut(s)	592, 900
FaqI	GGGAC	1 cut(s)	435
FauI	CCCGC	2 cut(s)	68, 245
FbaI	TGATCA	1 cut(s)	771
Fnu4HI	GCNGC	4 cut(s)	234, 297, 678, 767
FokI	GGATG	5 cut(s)	47, 709, 730, 859, 938
Fsp4HI	GCNGC	4 cut(s)	234, 297, 678, 767
FspBI	CTAG	2 cut(s)	332, 641
GluI	GCNGC	4 cut(s)	234, 297, 678, 767
HapII	CCGG	4 cut(s)	164, 224, 522, 747
HindIII	AAGCTT	1 cut(s)	663
HinfI	GANTC	4 cut(s)	56, 249, 721, 914
HpaII	CCGG	4 cut(s)	164, 224, 522, 747
HphI	GGTGA	2 cut(s)	574, 853
Hpy166II	GTNNAC	2 cut(s)	136, 343
Hpy188I	TCNGA	1 cut(s)	402
Hpy188III	TCNNGA	5 cut(s)	19, 76, 142, 718, 747
Hpy8I	GTNNAC	2 cut(s)	136, 343
HpyAV	CCTTC	3 cut(s)	25, 213, 412
HpyCH4III	ACNGT	4 cut(s)	69, 586, 711, 871
HpyCH4IV	ACGT	1 cut(s)	909
HpyCH4V	TGCA	2 cut(s)	766, 875
HpyF10VI	GCNNNNNNNGC	2 cut(s)	557, 900
HpyF3I	CTNAG	4 cut(s)	97, 401, 591, 920
HpySE526I	ACGT	1 cut(s)	909
Kpn2I	TCCGGA	1 cut(s)	746
Ksp22I	TGATCA	1 cut(s)	771
Kzo9I	GATC	5 cut(s)	168, 180, 211, 771, 785
LpnPI	CCDG	8 cut(s)	177, 237, 408, 535, 546, 760, 795, 907
Lsp1109I	GCAGC	3 cut(s)	245, 689, 778
LweI	GCATC	2 cut(s)	356, 752
MaeI	CTAG	2 cut(s)	332, 641
MaeII	ACGT	1 cut(s)	909
MaeIII	GTNAC	3 cut(s)	430, 796, 859
MalI	GATC	5 cut(s)	170, 182, 213, 773, 787
MboI	GATC	5 cut(s)	168, 180, 211, 771, 785
MboII	GAAGA	5 cut(s)	273, 469, 712, 795, 939
MfeI	CAATTG	1 cut(s)	124
MflI	RGATCY	1 cut(s)	211
MluCI	AATT	2 cut(s)	124, 269
MlyI	GAGTC	2 cut(s)	258, 923
MmeI	TCCRAC	1 cut(s)	239
MroI	TCCGGA	1 cut(s)	746
MroXI	GAANNNNTTC	1 cut(s)	725
MseI	TTAA	4 cut(s)	363, 408, 690, 803
MspA1I	CMGCKG	1 cut(s)	769
MspI	CCGG	4 cut(s)	164, 224, 522, 747
MspR9I	CCNGG	1 cut(s)	224
MunI	CAATTG	1 cut(s)	124
MvnI	CGCG	1 cut(s)	296
MwoI	GCNNNNNNNGC	2 cut(s)	557, 900
NciI	CCSGG	1 cut(s)	224
NdeII	GATC	5 cut(s)	168, 180, 211, 771, 785
NlaIV	GGNNCC	3 cut(s)	423, 526, 659
NmuCI	GTSAC	2 cut(s)	430, 859
PdmI	GAANNNNTTC	1 cut(s)	725
PfeI	GAWTC	2 cut(s)	56, 721
PflMI	CCANNNNNTGG	2 cut(s)	274, 667
PkrI	GCNGC	4 cut(s)	235, 298, 679, 768
PleI	GAGTC	2 cut(s)	257, 922
PpsI	GAGTC	2 cut(s)	257, 922
PpuMI	RGGWCCY	1 cut(s)	422
PsiI	TTATAA	1 cut(s)	485
Psp5II	RGGWCCY	1 cut(s)	422
PspEI	GGTNACC	1 cut(s)	796
PspN4I	GGNNCC	3 cut(s)	423, 526, 659
PspPI	GGNCC	1 cut(s)	422
PspPPI	RGGWCCY	1 cut(s)	422
PsuI	RGATCY	1 cut(s)	211
PvuII	CAGCTG	1 cut(s)	769
RsaI	GTAC	1 cut(s)	162
RsaNI	GTAC	1 cut(s)	161
SaqAI	TTAA	4 cut(s)	363, 408, 690, 803
SatI	GCNGC	4 cut(s)	234, 297, 678, 767
Sau3AI	GATC	5 cut(s)	168, 180, 211, 771, 785
Sau96I	GGNCC	1 cut(s)	422
SchI	GAGTC	2 cut(s)	258, 923
ScrFI	CCNGG	1 cut(s)	224
SfaNI	GCATC	2 cut(s)	356, 752
SinI	GGWCC	1 cut(s)	422
SmlI	CTYRAG	1 cut(s)	74
SmoI	CTYRAG	1 cut(s)	74
Sse9I	AATT	2 cut(s)	124, 269
SsiI	CCGC	6 cut(s)	61, 238, 296, 551, 794, 839
SspMI	CTAG	2 cut(s)	332, 641
StyD4I	CCNGG	1 cut(s)	222
StyI	CCWWGG	1 cut(s)	898
TaaI	ACNGT	4 cut(s)	69, 586, 711, 871
TaiI	ACGT	1 cut(s)	912
TaqI	TCGA	4 cut(s)	7, 206, 555, 635
TasI	AATT	2 cut(s)	124, 269
TauI	GCSGC	1 cut(s)	299
TfiI	GAWTC	2 cut(s)	56, 721
Tru1I	TTAA	4 cut(s)	363, 408, 690, 803
Tru9I	TTAA	4 cut(s)	363, 408, 690, 803
TseFI	GTSAC	2 cut(s)	430, 859
TseI	GCWGC	3 cut(s)	233, 677, 766
Tsp45I	GTSAC	2 cut(s)	430, 859
TspDTI	ATGAA	4 cut(s)	69, 273, 384, 713
TspGWI	ACGGA	1 cut(s)	517
Van91I	CCANNNNNTGG	2 cut(s)	274, 667
VpaK11BI	GGWCC	1 cut(s)	422
XmnI	GAANNNNTTC	1 cut(s)	725
XspI	CTAG	2 cut(s)	332, 641

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.