Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000913

Physical Location & Seq

Genomic Coordinates Forward (+)

2749908 .. 2752390

Gene Structure 2483 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G09010.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

ATGCGTTATAATTGCTTCGGACTTCTAGATATGTGCAACGGAAGTGATCGTCTTGGACAAAGAGAAGCTGAAGAGATTTGCACCAACAATGTGAGGGTCTTTTCATATAATTCATTAAGATCAGCCACTGATAGTTTCCATCCAACGAACAGAATCGGAGGTGGTGGCTATGGCGTTGTCTTTAAGGGAGTTTTGAGAGATGGCACACAAGTAGCTGTGAAATCACTATCAGCAGAATCTAAACAAGGGACACGCGAGTTCTTGACCGAGATTAACTTGATATCAAACATTCATCATCCTAACCTTGTTAAACTCATCGGTTGCTGCATCGAAGGGAACAATCGGATTCTTGTCTATGAGTACCTTGAGAACAACAGTCTTGCTAGTGTTTTGCTTGGTTCAAGGAGTAGATATGTACCGCTTGATTGGTCCAAAAGAGCTGCGATTTGCGTTGGGACAGCTTCGGGTTTAGCTTTCCTTCACGAGGAAGTCGAACCTCATGTTGTTCACCGTGACATCAAGGCGAGTAATATCTTACTAGACTCAAACTTTTCTCCCAAAATTGGTGATTTCGGGTTGGCTAAGCTTTTTCCAGACAATGTCACTCATGTCAGTACCCGAGTCGCTGGAACAGTGGGATACTTGGCTCCAGAATATGCACTTCTTGGTCAACTGACAAAAAAAGCAGACGTTTACAGCTTCGGGATACTTGTGCTTGAGGTCATTAGTGGTAATAGTAGCACCAGAGCCGCCTTTGGAGACGAGTACATGGTTCTTGTTGAATGGGTGTGGAAGCTGAGAGAAGAAAGGAGGCTACTAGAGTGTGTAGATCCAGAACTAACCAAGTTCCCCGCAGATGAAGTGACCCGTTTCATCAAGGTGGCTCTTTTCTGCACTCAAGCCGCGGCGCAAAAGAGACCAAACATGAAGCAAGTGATGGAGATGCTTCGCAGGAAAGAGCTTAACCTCAACGAGGATGCCTTAACGGAACCTGGCGTCTACAGAGGTGTCAACAGGGGACGCAACCACCGTGGAATCGGTCTTAGGGTCGGCCAAGGAGGCAGCTCACAGGAGAGCTCGTCAACGCAACGTGACAAAGGGAAAAGCTCAGCCGTTCCTCAAGGGTCGACGTCCAACTCTAATATTTCCTTCCAGAGCATCACAGAGTTGGCTCCTAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

393

Amino Acids

43.4

Weight (kDa)

8.7

Isoelectric Point (pI)

39.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	47 - 250	1.6e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	49 - 250	2.1e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000913)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09010 AT3G09010
fragaria_vesca	FvH4_3g04850 FvH4_3g04850 FvH4_3g04850 FvH4_3g04850 FvH4_3g04850 FvH4_3g04850 FvH4_6g11590 FvH4_6g11590 FvH4_6g11600 FvH4_6g11600 FvH4_6g11600 FvH4_6g11600
malus_domestica	MD04G1150800.v1.1 MD04G1150900.v1.1 MD05G1316300.v1.1 MD10G1296800.v1.1 MD12G1164800.v1.1
prunus_persica	Prupe.4G043800_v2.0.a1 Prupe.4G043800_v2.0.a1 Prupe.4G043800_v2.0.a1 Prupe.4G043800_v2.0.a1 Prupe.4G043800_v2.0.a1 Prupe.4G043800_v2.0.a1 Prupe.6G275600_v2.0.a1 Prupe.6G275600_v2.0.a1 Prupe.6G275700_v2.0.a1
pyrus_communis	pycom04g13650 pycom04g13660 pycom10g24970
rosa_chinensis	RchiOBHm_Chr3g0463271 RchiOBHm_Chr3g0463281 RchiOBHm_Chr5g0008011
rosa_laevigata	RLG00000024794 RLG00000031527
rosa_multiflora	Rmu_sc0002976.1_g000005 Rmu_sc0003073.1_g000002 Rmu_sc0007348.1_g000004 Rmu_sc0035275.1_g000002
rosa_roxburghii	Rroxscaffold_1G00068460 Rroxscaffold_6G00416710
rosa_rugosa	Rorug03G0063300 Rorug03G0063300 Rorug03G0063400 Rorug03G0063400 Rorug03G0063400 Rorug03G0063500 Rorug04G0432400 Rorug04G0432500
rosa_samantha	Rh3AG121300 Rh3AG121400 Rh3BG125800 Rh3BG125900 Rh3CG127700 Rh3CG127800 Rh3DG126900 Rh3DG127000 Rh5AG060600 Rh5BG057400 Rh5CG067500 Rh5DG056600
rosa_wichuraiana	Rw3G010300 Rw3G010310 Rw5G006000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	9
AatII	GACGTC	1 cut(s)	1133
AccI	GTMKAC	2 cut(s)	999, 1127
AccII	CGCG	2 cut(s)	255, 905
AciI	CCGC	5 cut(s)	419, 750, 852, 903, 905
AclWI	GGATC	1 cut(s)	824
AcoI	YGGCCR	1 cut(s)	1051
AcuI	CTGAAG	1 cut(s)	90
AcyI	GRCGYC	2 cut(s)	996, 1130
AfaI	GTAC	4 cut(s)	362, 417, 616, 767
AfiI	CCNNNNNNNGG	3 cut(s)	484, 563, 973
AgsI	TTSAA	2 cut(s)	402, 782
AjnI	CCWGG	1 cut(s)	991
Alw21I	GWGCWC	1 cut(s)	1079
Alw26I	GTCTC	2 cut(s)	753, 910
AlwI	GGATC	1 cut(s)	824
AlwNI	CAGNNNCTG	1 cut(s)	128
Ama87I	CYCGRG	1 cut(s)	618
AoxI	GGCC	1 cut(s)	1051
ApeKI	GCWGC	3 cut(s)	324, 440, 1062
AspLEI	GCGC	1 cut(s)	910
AspS9I	GGNCC	1 cut(s)	429
AsuHPI	GGTGA	2 cut(s)	500, 578
AvaI	CYCGRG	1 cut(s)	618
AvaII	GGWCC	1 cut(s)	429
BanII	GRGCYC	1 cut(s)	1079
BauI	CACGAG	1 cut(s)	482
Bbv12I	GWGCWC	1 cut(s)	1079
BbvI	GCAGC	3 cut(s)	311, 427, 1074
BccI	CCATC	3 cut(s)	147, 194, 931
BceAI	ACGGC	1 cut(s)	1097
BciT130I	CCWGG	1 cut(s)	993
BciVI	GTATCC	2 cut(s)	632, 699
BcoDI	GTCTC	2 cut(s)	753, 910
BfaI	CTAG	5 cut(s)	26, 384, 539, 818, 1176
BfmI	CTRYAG	1 cut(s)	1000
BfuI	GTATCC	2 cut(s)	632, 699
BglI	GCCNNNNNGGC	1 cut(s)	1059
BisI	GCNGC	6 cut(s)	325, 441, 750, 903, 906, 1063
BlpI	GCTNAGC	2 cut(s)	582, 1108
BlsI	GCNGC	6 cut(s)	326, 442, 751, 904, 907, 1064
Bme1390I	CCNGG	1 cut(s)	993
Bme18I	GGWCC	1 cut(s)	429
BmeT110I	CYCGRG	1 cut(s)	618
BmgT120I	GGNCC	1 cut(s)	429
BmiI	GGNNCC	3 cut(s)	648, 990, 1173
BmrFI	CCNGG	1 cut(s)	993
BmsI	GCATC	4 cut(s)	336, 933, 967, 1167
BpmI	CTGGAG	1 cut(s)	633
Bpu1102I	GCTNAGC	2 cut(s)	582, 1108
BpuEI	CTTGAG	4 cut(s)	386, 737, 882, 1104
BsaHI	GRCGYC	2 cut(s)	996, 1130
BsaI	GGTCTC	1 cut(s)	910
BsaJI	CCNNGG	3 cut(s)	903, 1030, 1054
BsaXI	ACNNNNNCTCC	2 cut(s)	1064, 1094
Bsc4I	CCNNNNNNNGG	3 cut(s)	484, 563, 973
BseBI	CCWGG	1 cut(s)	993
BseDI	CCNNGG	3 cut(s)	903, 1030, 1054
BseGI	GGATG	3 cut(s)	139, 295, 982
BseLI	CCNNNNNNNGG	3 cut(s)	484, 563, 973
BseMII	CTCAG	2 cut(s)	788, 1122
BseXI	GCAGC	3 cut(s)	311, 427, 1074
BsgI	GTGCAG	1 cut(s)	877
Bsh1236I	CGCG	2 cut(s)	255, 905
BshFI	GGCC	1 cut(s)	1053
BsiHKAI	GWGCWC	1 cut(s)	1079
BsiHKCI	CYCGRG	1 cut(s)	618
BslFI	GGGAC	3 cut(s)	262, 469, 1032
BslI	CCNNNNNNNGG	3 cut(s)	484, 563, 973
BsmAI	GTCTC	2 cut(s)	753, 910
BsmBI	CGTCTC	1 cut(s)	753
BsmFI	GGGAC	3 cut(s)	262, 469, 1032
BsnI	GGCC	1 cut(s)	1053
Bso31I	GGTCTC	1 cut(s)	910
BsoBI	CYCGRG	1 cut(s)	618
Bsp1286I	GDGCHC	1 cut(s)	1079
Bsp143I	GATC	3 cut(s)	46, 119, 829
Bsp1720I	GCTNAGC	2 cut(s)	582, 1108
BspACI	CCGC	5 cut(s)	419, 750, 852, 903, 905
BspANI	GGCC	1 cut(s)	1053
BspCNI	CTCAG	2 cut(s)	789, 1121
BspFNI	CGCG	2 cut(s)	255, 905
BspLI	GGNNCC	3 cut(s)	648, 990, 1173
BspPI	GGATC	1 cut(s)	824
BspTNI	GGTCTC	1 cut(s)	910
BssECI	CCNNGG	3 cut(s)	903, 1030, 1054
BssMI	GATC	3 cut(s)	46, 119, 829
BssNI	GRCGYC	2 cut(s)	996, 1130
BssSI	CACGAG	1 cut(s)	482
BssT1I	CCWWGG	1 cut(s)	1054
Bst2BI	CACGAG	1 cut(s)	482
Bst2UI	CCWGG	1 cut(s)	993
Bst4CI	ACNGT	4 cut(s)	377, 512, 634, 1031
Bst6I	CTCTTC	1 cut(s)	66
BstACI	GRCGYC	2 cut(s)	996, 1130
BstDEI	CTNAG	4 cut(s)	582, 797, 1043, 1108
BstDSI	CCRYGG	2 cut(s)	903, 1030
BstENI	CCTNNNNNAGG	2 cut(s)	482, 971
BstF5I	GGATG	3 cut(s)	139, 295, 982
BstFNI	CGCG	2 cut(s)	255, 905
BstHHI	GCGC	1 cut(s)	910
BstKTI	GATC	3 cut(s)	49, 122, 832
BstMAI	GTCTC	2 cut(s)	753, 910
BstMBI	GATC	3 cut(s)	46, 119, 829
BstMWI	GCNNNNNNNGC	1 cut(s)	1059
BstNI	CCWGG	1 cut(s)	993
BstSCI	CCNGG	1 cut(s)	991
BstSFI	CTRYAG	1 cut(s)	1000
BstUI	CGCG	2 cut(s)	255, 905
BstV1I	GCAGC	3 cut(s)	311, 427, 1074
BstX2I	RGATCY	1 cut(s)	829
BstYI	RGATCY	1 cut(s)	829
BsuI	GTATCC	2 cut(s)	632, 699
BsuRI	GGCC	1 cut(s)	1053
BtgI	CCRYGG	2 cut(s)	903, 1030
BtsCI	GGATG	3 cut(s)	139, 295, 982
BtsIMutI	CAGTG	2 cut(s)	126, 639
CaiI	CAGNNNCTG	1 cut(s)	128
CfoI	GCGC	1 cut(s)	910
Cfr13I	GGNCC	1 cut(s)	429
Cfr42I	CCGCGG	1 cut(s)	906
CseI	GACGC	2 cut(s)	985, 1029
Csp6I	GTAC	4 cut(s)	361, 416, 615, 766
CspCI	CAANNNNNGTGG	2 cut(s)	1012, 1047
CviAII	CATG	4 cut(s)	500, 608, 769, 925
CviQI	GTAC	4 cut(s)	361, 416, 615, 766
DdeI	CTNAG	4 cut(s)	582, 797, 1043, 1108
DpnI	GATC	3 cut(s)	48, 121, 831
DpnII	GATC	3 cut(s)	46, 119, 829
EaeI	YGGCCR	1 cut(s)	1051
Eam1104I	CTCTTC	1 cut(s)	66
EarI	CTCTTC	1 cut(s)	66
Ecl136II	GAGCTC	1 cut(s)	1077
Eco130I	CCWWGG	1 cut(s)	1054
Eco24I	GRGCYC	1 cut(s)	1079
Eco31I	GGTCTC	1 cut(s)	910
Eco32I	GATATC	1 cut(s)	282
Eco47I	GGWCC	1 cut(s)	429
Eco53kI	GAGCTC	1 cut(s)	1077
Eco57I	CTGAAG	1 cut(s)	90
Eco88I	CYCGRG	1 cut(s)	618
EcoICRI	GAGCTC	1 cut(s)	1077
EcoNI	CCTNNNNNAGG	2 cut(s)	482, 971
EcoRII	CCWGG	1 cut(s)	991
EcoRV	GATATC	1 cut(s)	282
EcoT14I	CCWWGG	1 cut(s)	1054
EcoT38I	GRGCYC	1 cut(s)	1079
ErhI	CCWWGG	1 cut(s)	1054
Esp3I	CGTCTC	1 cut(s)	753
FaeI	CATG	4 cut(s)	503, 611, 772, 928
FaqI	GGGAC	3 cut(s)	262, 469, 1032
FatI	CATG	4 cut(s)	499, 607, 768, 924
FauI	CCCGC	1 cut(s)	859
FblI	GTMKAC	2 cut(s)	999, 1127
Fnu4HI	GCNGC	6 cut(s)	325, 441, 750, 903, 906, 1063
FokI	GGATG	3 cut(s)	126, 282, 989
FriOI	GRGCYC	1 cut(s)	1079
Fsp4HI	GCNGC	6 cut(s)	325, 441, 750, 903, 906, 1063
FspBI	CTAG	5 cut(s)	26, 384, 539, 818, 1176
GlaI	GCGC	1 cut(s)	909
GluI	GCNGC	6 cut(s)	325, 441, 750, 903, 906, 1063
GsuI	CTGGAG	1 cut(s)	633
HaeIII	GGCC	1 cut(s)	1053
HgaI	GACGC	2 cut(s)	985, 1029
HhaI	GCGC	1 cut(s)	910
Hin1I	GRCGYC	2 cut(s)	996, 1130
Hin1II	CATG	4 cut(s)	503, 611, 772, 928
Hin6I	GCGC	1 cut(s)	908
HinP1I	GCGC	1 cut(s)	908
HincII	GTYRAC	4 cut(s)	671, 1012, 1083, 1128
HindII	GTYRAC	4 cut(s)	671, 1012, 1083, 1128
HindIII	AAGCTT	1 cut(s)	584
HinfI	GANTC	6 cut(s)	153, 236, 346, 542, 621, 1035
HphI	GGTGA	2 cut(s)	500, 578
Hpy166II	GTNNAC	7 cut(s)	508, 671, 694, 1000, 1012, 1083, 1128
Hpy188I	TCNGA	3 cut(s)	20, 158, 345
Hpy188III	TCNNGA	8 cut(s)	26, 262, 482, 593, 650, 703, 833, 1153
Hpy8I	GTNNAC	7 cut(s)	508, 671, 694, 1000, 1012, 1083, 1128
Hpy99I	CGWCG	1 cut(s)	1132
HpyAV	CCTTC	3 cut(s)	326, 488, 1159
HpyCH4III	ACNGT	4 cut(s)	377, 512, 634, 1031
HpyCH4IV	ACGT	3 cut(s)	690, 1090, 1130
HpyCH4V	TGCA	5 cut(s)	36, 81, 327, 659, 894
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1059
HpyF3I	CTNAG	4 cut(s)	582, 797, 1043, 1108
HpySE526I	ACGT	3 cut(s)	690, 1090, 1130
Hsp92I	GRCGYC	2 cut(s)	996, 1130
Hsp92II	CATG	4 cut(s)	503, 611, 772, 928
HspAI	GCGC	1 cut(s)	908
KspI	CCGCGG	1 cut(s)	906
Kzo9I	GATC	3 cut(s)	46, 119, 829
LmnI	GCTCC	2 cut(s)	652, 1177
Lsp1109I	GCAGC	3 cut(s)	311, 427, 1074
LweI	GCATC	4 cut(s)	336, 933, 967, 1167
MaeI	CTAG	5 cut(s)	26, 384, 539, 818, 1176
MaeII	ACGT	3 cut(s)	690, 1090, 1130
MaeIII	GTNAC	4 cut(s)	512, 601, 862, 1091
MalI	GATC	3 cut(s)	48, 121, 831
MboI	GATC	3 cut(s)	46, 119, 829
MboII	GAAGA	2 cut(s)	83, 815
MflI	RGATCY	1 cut(s)	829
MhlI	GDGCHC	1 cut(s)	1079
MluCI	AATT	3 cut(s)	10, 109, 561
MlyI	GAGTC	2 cut(s)	536, 630
MmeI	TCCRAC	2 cut(s)	167, 1158
MseI	TTAA	6 cut(s)	116, 183, 273, 309, 963, 983
MslI	CAYNNNNRTG	1 cut(s)	878
MspA1I	CMGCKG	1 cut(s)	905
MspR9I	CCNGG	1 cut(s)	993
MvaI	CCWGG	1 cut(s)	993
MvnI	CGCG	2 cut(s)	255, 905
MwoI	GCNNNNNNNGC	1 cut(s)	1059
NdeII	GATC	3 cut(s)	46, 119, 829
NlaIII	CATG	4 cut(s)	503, 611, 772, 928
NlaIV	GGNNCC	3 cut(s)	648, 990, 1173
NmuCI	GTSAC	4 cut(s)	512, 601, 862, 1091
PcsI	WCGNNNNNNNCGW	2 cut(s)	489, 1027
PfeI	GAWTC	4 cut(s)	153, 236, 346, 1035
PflFI	GACNNNGTC	1 cut(s)	599
PkrI	GCNGC	6 cut(s)	326, 442, 751, 904, 907, 1064
PleI	GAGTC	2 cut(s)	536, 629
PpsI	GAGTC	2 cut(s)	536, 629
PsiI	TTATAA	1 cut(s)	9
Psp124BI	GAGCTC	1 cut(s)	1079
Psp6I	CCWGG	1 cut(s)	991
PspGI	CCWGG	1 cut(s)	991
PspN4I	GGNNCC	3 cut(s)	648, 990, 1173
PspPI	GGNCC	1 cut(s)	429
PstNI	CAGNNNCTG	1 cut(s)	128
PsuI	RGATCY	1 cut(s)	829
PsyI	GACNNNGTC	1 cut(s)	599
RsaI	GTAC	4 cut(s)	362, 417, 616, 767
RsaNI	GTAC	4 cut(s)	361, 416, 615, 766
RseI	CAYNNNNRTG	1 cut(s)	878
SacI	GAGCTC	1 cut(s)	1079
SacII	CCGCGG	1 cut(s)	906
SalI	GTCGAC	1 cut(s)	1126
SaqAI	TTAA	6 cut(s)	116, 183, 273, 309, 963, 983
SatI	GCNGC	6 cut(s)	325, 441, 750, 903, 906, 1063
Sau3AI	GATC	3 cut(s)	46, 119, 829
Sau96I	GGNCC	1 cut(s)	429
SchI	GAGTC	2 cut(s)	536, 630
ScrFI	CCNGG	1 cut(s)	993
SduI	GDGCHC	1 cut(s)	1079
SfaNI	GCATC	4 cut(s)	336, 933, 967, 1167
SfcI	CTRYAG	1 cut(s)	1000
Sfr303I	CCGCGG	1 cut(s)	906
SgrBI	CCGCGG	1 cut(s)	906
SinI	GGWCC	1 cut(s)	429
SmiMI	CAYNNNNRTG	1 cut(s)	878
SmlI	CTYRAG	4 cut(s)	365, 716, 897, 1119
SmoI	CTYRAG	4 cut(s)	365, 716, 897, 1119
Sse9I	AATT	3 cut(s)	10, 109, 561
SsiI	CCGC	5 cut(s)	419, 750, 852, 903, 905
SspI	AATATT	1 cut(s)	1144
SspMI	CTAG	5 cut(s)	26, 384, 539, 818, 1176
SstI	GAGCTC	1 cut(s)	1079
StyD4I	CCNGG	1 cut(s)	991
StyI	CCWWGG	1 cut(s)	1054
TaaI	ACNGT	4 cut(s)	377, 512, 634, 1031
TaiI	ACGT	3 cut(s)	693, 1093, 1133
TaqI	TCGA	3 cut(s)	330, 492, 1127
TaqII	GACCGA	2 cut(s)	281, 1028
TasI	AATT	3 cut(s)	10, 109, 561
TatI	WGTACW	1 cut(s)	765
TauI	GCSGC	3 cut(s)	752, 905, 908
TfiI	GAWTC	4 cut(s)	153, 236, 346, 1035
Tru1I	TTAA	6 cut(s)	116, 183, 273, 309, 963, 983
Tru9I	TTAA	6 cut(s)	116, 183, 273, 309, 963, 983
TscAI	CASTG	2 cut(s)	133, 639
TseFI	GTSAC	4 cut(s)	512, 601, 862, 1091
TseI	GCWGC	3 cut(s)	324, 440, 1062
Tsp45I	GTSAC	4 cut(s)	512, 601, 862, 1091
TspDTI	ATGAA	6 cut(s)	93, 102, 281, 862, 873, 941
TspGWI	ACGGA	2 cut(s)	54, 1001
TspRI	CASTG	2 cut(s)	133, 639
Tth111I	GACNNNGTC	1 cut(s)	599
VpaK11BI	GGWCC	1 cut(s)	429
XagI	CCTNNNNNAGG	2 cut(s)	482, 971
XbaI	TCTAGA	1 cut(s)	25
XmiI	GTMKAC	2 cut(s)	999, 1127
XspI	CTAG	5 cut(s)	26, 384, 539, 818, 1176
ZraI	GACGTC	1 cut(s)	1131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.