Belongs to the protein kinase superfamily
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PHD | PF00628 | 54 - 95 | 8.3e-07 | PHD-finger |
| Chromo | PF00385 | 123 - 155 | 3.5e-08 | Chromo (CHRromatin Organisation MOdifier) domain |
| Chromo | PF00385 | 193 - 240 | 1e-13 | Chromo (CHRromatin Organisation MOdifier) domain |
| ResIII | PF04851 | 283 - 464 | 7.7e-09 | Type III restriction enzyme, res subunit |
| SNF2-rel_dom | PF00176 | 287 - 583 | 1.5e-80 | SNF2-related domain |
| HDA2-3 | PF11496 | 534 - 749 | 1.8e-09 | Class II histone deacetylase complex subunits 2 and 3 |
| Helicase_C | PF00271 | 607 - 720 | 1e-24 | Helicase conserved C-terminal domain |
| DUF1087 | PF06465 | 843 - 901 | 1.2e-22 | CHD subfamily II, DUF1087 |
| CHDII_SANT-like | PF06461 | 938 - 1070 | 2.2e-51 | CHD subfamily II, SANT-like domain |
| HTH_CHD1_Hrp3 | PF23588 | 1085 - 1123 | 8.6e-06 | ATP-dependent helicase CHD1-2/hrp3 HTH domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 54 |
| Acc16I | TGCGCA | 3 cut(s) | 26, 1724, 2343 |
| Acc36I | ACCTGC | 1 cut(s) | 3382 |
| AccB1I | GGYRCC | 1 cut(s) | 1060 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3713 |
| AccII | CGCG | 1 cut(s) | 484 |
| AccIII | TCCGGA | 2 cut(s) | 277, 839 |
| AciI | CCGC | 5 cut(s) | 344, 482, 1109, 3671, 3869 |
| AclI | AACGTT | 1 cut(s) | 1025 |
| AclWI | GGATC | 8 cut(s) | 71, 583, 596, 1214, 2332, 3270, 3494, 3797 |
| AcuI | CTGAAG | 4 cut(s) | 1379, 2778, 3447, 3939 |
| AdeI | CACNNNGTG | 1 cut(s) | 1873 |
| AfaI | GTAC | 4 cut(s) | 847, 1355, 1927, 3126 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 86, 87, 247, 2798, 3104, 3386, 3391, 3713 |
| AflII | CTTAAG | 1 cut(s) | 1853 |
| AflIII | ACRYGT | 1 cut(s) | 1899 |
| AjiI | CACGTC | 1 cut(s) | 145 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2231, 2263 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3484, 3516 |
| Alw21I | GWGCWC | 5 cut(s) | 112, 1690, 2149, 3415, 4010 |
| Alw26I | GTCTC | 2 cut(s) | 1975, 3879 |
| Alw44I | GTGCAC | 1 cut(s) | 1686 |
| AlwI | GGATC | 8 cut(s) | 71, 583, 596, 1214, 2332, 3270, 3494, 3797 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3877 |
| Aor13HI | TCCGGA | 2 cut(s) | 277, 839 |
| AoxI | GGCC | 1 cut(s) | 2478 |
| ApaLI | GTGCAC | 1 cut(s) | 1686 |
| ApeKI | GCWGC | 8 cut(s) | 22, 1617, 1858, 2393, 2549, 3443, 3785, 3788 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 975, 1007 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2806, 2862, 3777 |
| AspLEI | GCGC | 4 cut(s) | 27, 1725, 2344, 3194 |
| AspS9I | GGNCC | 3 cut(s) | 897, 2789, 3337 |
| AsuHPI | GGTGA | 3 cut(s) | 617, 2185, 3749 |
| AsuII | TTCGAA | 1 cut(s) | 981 |
| AsuNHI | GCTAGC | 1 cut(s) | 596 |
| AvaII | GGWCC | 3 cut(s) | 897, 2789, 3337 |
| BaeGI | GKGCMC | 3 cut(s) | 1063, 1690, 1869 |
| BamHI | GGATCC | 1 cut(s) | 588 |
| BanI | GGYRCC | 1 cut(s) | 1060 |
| BanII | GRGCYC | 3 cut(s) | 112, 293, 2149 |
| BauI | CACGAG | 1 cut(s) | 2196 |
| BbsI | GAAGAC | 7 cut(s) | 516, 990, 1923, 2700, 3011, 3525, 3912 |
| Bbv12I | GWGCWC | 5 cut(s) | 112, 1690, 2149, 3415, 4010 |
| BbvCI | CCTCAGC | 1 cut(s) | 3825 |
| BbvI | GCAGC | 8 cut(s) | 9, 1629, 1870, 2380, 2536, 3430, 3772, 3800 |
| BclI | TGATCA | 2 cut(s) | 2091, 3739 |
| BcoDI | GTCTC | 2 cut(s) | 1975, 3879 |
| BfmI | CTRYAG | 6 cut(s) | 169, 2550, 2568, 2811, 3786, 3878 |
| BfoI | RGCGCY | 1 cut(s) | 3195 |
| BfrI | CTTAAG | 1 cut(s) | 1853 |
| BfuAI | ACCTGC | 1 cut(s) | 3382 |
| BglII | AGATCT | 3 cut(s) | 731, 1506, 2125 |
| BisI | GCNGC | 8 cut(s) | 23, 1618, 1859, 2394, 2550, 3444, 3786, 3789 |
| BlsI | GCNGC | 8 cut(s) | 24, 1619, 1860, 2395, 2551, 3445, 3787, 3790 |
| BmcAI | AGTACT | 1 cut(s) | 1355 |
| Bme18I | GGWCC | 3 cut(s) | 897, 2789, 3337 |
| BmgBI | CACGTC | 1 cut(s) | 145 |
| BmgT120I | GGNCC | 3 cut(s) | 897, 2789, 3337 |
| BmiI | GGNNCC | 6 cut(s) | 252, 590, 1014, 1062, 2538, 3493 |
| BmrI | ACTGGG | 1 cut(s) | 3723 |
| BmsI | GCATC | 9 cut(s) | 346, 763, 862, 980, 1429, 1768, 2211, 2295, 2380 |
| BmtI | GCTAGC | 1 cut(s) | 600 |
| BmuI | ACTGGG | 1 cut(s) | 3723 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2562 |
| BpiI | GAAGAC | 7 cut(s) | 516, 990, 1923, 2700, 3011, 3525, 3912 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3585, 3617 |
| BpmI | CTGGAG | 1 cut(s) | 1495 |
| Bpu10I | CCTNAGC | 3 cut(s) | 111, 3486, 3825 |
| Bpu14I | TTCGAA | 1 cut(s) | 981 |
| BpuEI | CTTGAG | 1 cut(s) | 3698 |
| Bsa29I | ATCGAT | 1 cut(s) | 1999 |
| BsaBI | GATNNNNATC | 4 cut(s) | 75, 2112, 2323, 3807 |
| BsaJI | CCNNGG | 5 cut(s) | 3229, 3340, 3385, 3386, 3690 |
| BsaWI | WCCGGW | 4 cut(s) | 277, 585, 839, 1765 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1372, 1402, 3058, 3088, 3465, 3495 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 86, 87, 247, 2798, 3104, 3386, 3391, 3713 |
| Bse1I | ACTGG | 6 cut(s) | 97, 724, 1361, 1387, 3503, 3718 |
| Bse3DI | GCAATG | 2 cut(s) | 278, 430 |
| Bse8I | GATNNNNATC | 4 cut(s) | 75, 2112, 2323, 3807 |
| BseAI | TCCGGA | 2 cut(s) | 277, 839 |
| BseCI | ATCGAT | 1 cut(s) | 1999 |
| BseDI | CCNNGG | 5 cut(s) | 3229, 3340, 3385, 3386, 3690 |
| BseJI | GATNNNNATC | 4 cut(s) | 75, 2112, 2323, 3807 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 86, 87, 247, 2798, 3104, 3386, 3391, 3713 |
| BseMI | GCAATG | 2 cut(s) | 278, 430 |
| BseMII | CTCAG | 5 cut(s) | 125, 438, 1968, 3500, 3839 |
| BseNI | ACTGG | 6 cut(s) | 97, 724, 1361, 1387, 3503, 3718 |
| BseRI | GAGGAG | 5 cut(s) | 243, 557, 1380, 1478, 2546 |
| BseSI | GKGCMC | 3 cut(s) | 1063, 1690, 1869 |
| BseXI | GCAGC | 8 cut(s) | 9, 1629, 1870, 2380, 2536, 3430, 3772, 3800 |
| BseYI | CCCAGC | 2 cut(s) | 2051, 2426 |
| BsgI | GTGCAG | 1 cut(s) | 2874 |
| Bsh1236I | CGCG | 1 cut(s) | 484 |
| BshFI | GGCC | 1 cut(s) | 2480 |
| BshNI | GGYRCC | 1 cut(s) | 1060 |
| BshVI | ATCGAT | 1 cut(s) | 1999 |
| BsiHKAI | GWGCWC | 5 cut(s) | 112, 1690, 2149, 3415, 4010 |
| BsiSI | CCGG | 4 cut(s) | 278, 586, 840, 1766 |
| BslFI | GGGAC | 5 cut(s) | 103, 429, 948, 3080, 3709 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 86, 87, 247, 2798, 3104, 3386, 3391, 3713 |
| BsmAI | GTCTC | 2 cut(s) | 1975, 3879 |
| BsmFI | GGGAC | 5 cut(s) | 103, 429, 948, 3080, 3709 |
| BsmI | GAATGC | 2 cut(s) | 467, 662 |
| BsnI | GGCC | 1 cut(s) | 2480 |
| Bsp119I | TTCGAA | 1 cut(s) | 981 |
| Bsp1286I | GDGCHC | 8 cut(s) | 112, 293, 1063, 1690, 1869, 2149, 3415, 4010 |
| Bsp13I | TCCGGA | 2 cut(s) | 277, 839 |
| Bsp1407I | TGTACA | 1 cut(s) | 1925 |
| Bsp19I | CCATGG | 1 cut(s) | 3690 |
| BspACI | CCGC | 5 cut(s) | 344, 482, 1109, 3671, 3869 |
| BspANI | GGCC | 1 cut(s) | 2480 |
| BspCNI | CTCAG | 5 cut(s) | 124, 439, 1969, 3499, 3838 |
| BspDI | ATCGAT | 1 cut(s) | 1999 |
| BspEI | TCCGGA | 2 cut(s) | 277, 839 |
| BspFNI | CGCG | 1 cut(s) | 484 |
| BspHI | TCATGA | 1 cut(s) | 1566 |
| BspLI | GGNNCC | 6 cut(s) | 252, 590, 1014, 1062, 2538, 3493 |
| BspMAI | CTGCAG | 4 cut(s) | 2554, 2815, 3790, 3882 |
| BspMI | ACCTGC | 1 cut(s) | 3382 |
| BspOI | GCTAGC | 1 cut(s) | 600 |
| BspPI | GGATC | 8 cut(s) | 71, 583, 596, 1214, 2332, 3270, 3494, 3797 |
| BspQI | GCTCTTC | 4 cut(s) | 100, 752, 1099, 2292 |
| BspT104I | TTCGAA | 1 cut(s) | 981 |
| BspT107I | GGYRCC | 1 cut(s) | 1060 |
| BspTI | CTTAAG | 1 cut(s) | 1853 |
| BsrDI | GCAATG | 2 cut(s) | 278, 430 |
| BsrGI | TGTACA | 1 cut(s) | 1925 |
| BsrI | ACTGG | 6 cut(s) | 97, 724, 1361, 1387, 3503, 3718 |
| BssECI | CCNNGG | 5 cut(s) | 3229, 3340, 3385, 3386, 3690 |
| BssSI | CACGAG | 1 cut(s) | 2196 |
| BssT1I | CCWWGG | 1 cut(s) | 3690 |
| Bst2BI | CACGAG | 1 cut(s) | 2196 |
| Bst4CI | ACNGT | 8 cut(s) | 340, 580, 813, 824, 1353, 1925, 2089, 2561 |
| Bst6I | CTCTTC | 9 cut(s) | 100, 752, 1099, 1398, 1470, 2292, 2523, 2657, 3586 |
| BstAFI | CTTAAG | 1 cut(s) | 1853 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 221, 1873, 3173, 3877 |
| BstAUI | TGTACA | 1 cut(s) | 1925 |
| BstBI | TTCGAA | 1 cut(s) | 981 |
| BstC8I | GCNNGC | 7 cut(s) | 598, 1196, 1444, 1622, 1727, 3285, 3318 |
| BstDSI | CCRYGG | 1 cut(s) | 3690 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 3102, 3384 |
| BstFNI | CGCG | 1 cut(s) | 484 |
| BstH2I | RGCGCY | 1 cut(s) | 3195 |
| BstHHI | GCGC | 4 cut(s) | 27, 1725, 2344, 3194 |
| BstMAI | GTCTC | 2 cut(s) | 1975, 3879 |
| BstNSI | RCATGY | 4 cut(s) | 207, 1903, 3287, 3419 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2562 |
| BstSFI | CTRYAG | 6 cut(s) | 169, 2550, 2568, 2811, 3786, 3878 |
| BstSLI | GKGCMC | 3 cut(s) | 1063, 1690, 1869 |
| BstUI | CGCG | 1 cut(s) | 484 |
| BstV1I | GCAGC | 8 cut(s) | 9, 1629, 1870, 2380, 2536, 3430, 3772, 3800 |
| BstV2I | GAAGAC | 7 cut(s) | 516, 990, 1923, 2700, 3011, 3525, 3912 |
| BstX2I | RGATCY | 4 cut(s) | 588, 731, 1506, 2125 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 367 |
| BstYI | RGATCY | 4 cut(s) | 588, 731, 1506, 2125 |
| Bsu15I | ATCGAT | 1 cut(s) | 1999 |
| BsuRI | GGCC | 1 cut(s) | 2480 |
| BsuTUI | ATCGAT | 1 cut(s) | 1999 |
| BtgI | CCRYGG | 1 cut(s) | 3690 |
| BtgZI | GCGATG | 1 cut(s) | 1352 |
| BtrI | CACGTC | 1 cut(s) | 145 |
| BtsI | GCAGTG | 1 cut(s) | 848 |
| BtsIMutI | CAGTG | 4 cut(s) | 848, 1262, 2094, 3711 |
| BveI | ACCTGC | 1 cut(s) | 3382 |
| Cac8I | GCNNGC | 7 cut(s) | 598, 1196, 1444, 1622, 1727, 3285, 3318 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3877 |
| CciI | TCATGA | 1 cut(s) | 1566 |
| CfoI | GCGC | 4 cut(s) | 27, 1725, 2344, 3194 |
| Cfr13I | GGNCC | 3 cut(s) | 897, 2789, 3337 |
| ClaI | ATCGAT | 1 cut(s) | 1999 |
| CseI | GACGC | 3 cut(s) | 473, 2447, 3503 |
| CsiI | ACCWGGT | 1 cut(s) | 3433 |
| Csp6I | GTAC | 4 cut(s) | 846, 1354, 1926, 3125 |
| CviQI | GTAC | 4 cut(s) | 846, 1354, 1926, 3125 |
| DraI | TTTAAA | 2 cut(s) | 2475, 3816 |
| DraIII | CACNNNGTG | 1 cut(s) | 1873 |
| Eam1104I | CTCTTC | 9 cut(s) | 100, 752, 1099, 1398, 1470, 2292, 2523, 2657, 3586 |
| EarI | CTCTTC | 9 cut(s) | 100, 752, 1099, 1398, 1470, 2292, 2523, 2657, 3586 |
| EciI | GGCGGA | 1 cut(s) | 359 |
| Ecl136II | GAGCTC | 2 cut(s) | 110, 2147 |
| Eco130I | CCWWGG | 1 cut(s) | 3690 |
| Eco147I | AGGCCT | 1 cut(s) | 2480 |
| Eco24I | GRGCYC | 3 cut(s) | 112, 293, 2149 |
| Eco32I | GATATC | 3 cut(s) | 682, 1489, 1695 |
| Eco47I | GGWCC | 3 cut(s) | 897, 2789, 3337 |
| Eco53kI | GAGCTC | 2 cut(s) | 110, 2147 |
| Eco57I | CTGAAG | 4 cut(s) | 1379, 2778, 3447, 3939 |
| EcoICRI | GAGCTC | 2 cut(s) | 110, 2147 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 3102, 3384 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3337 |
| EcoRI | GAATTC | 1 cut(s) | 1046 |
| EcoRV | GATATC | 3 cut(s) | 682, 1489, 1695 |
| EcoT14I | CCWWGG | 1 cut(s) | 3690 |
| EcoT22I | ATGCAT | 1 cut(s) | 217 |
| EcoT38I | GRGCYC | 3 cut(s) | 112, 293, 2149 |
| ErhI | CCWWGG | 1 cut(s) | 3690 |
| FaqI | GGGAC | 5 cut(s) | 103, 429, 948, 3080, 3709 |
| FauI | CCCGC | 2 cut(s) | 489, 3876 |
| FauNDI | CATATG | 2 cut(s) | 1234, 3010 |
| FbaI | TGATCA | 2 cut(s) | 2091, 3739 |
| Fnu4HI | GCNGC | 8 cut(s) | 23, 1618, 1859, 2394, 2550, 3444, 3786, 3789 |
| FriOI | GRGCYC | 3 cut(s) | 112, 293, 2149 |
| Fsp4HI | GCNGC | 8 cut(s) | 23, 1618, 1859, 2394, 2550, 3444, 3786, 3789 |
| FspI | TGCGCA | 3 cut(s) | 26, 1724, 2343 |
| GlaI | GCGC | 4 cut(s) | 26, 1724, 2343, 3193 |
| GluI | GCNGC | 8 cut(s) | 23, 1618, 1859, 2394, 2550, 3444, 3786, 3789 |
| GsaI | CCCAGC | 2 cut(s) | 2055, 2430 |
| GsuI | CTGGAG | 1 cut(s) | 1495 |
| HaeII | RGCGCY | 1 cut(s) | 3195 |
| HaeIII | GGCC | 1 cut(s) | 2480 |
| HapII | CCGG | 4 cut(s) | 278, 586, 840, 1766 |
| HgaI | GACGC | 3 cut(s) | 473, 2447, 3503 |
| HhaI | GCGC | 4 cut(s) | 27, 1725, 2344, 3194 |
| Hin6I | GCGC | 4 cut(s) | 25, 1723, 2342, 3192 |
| HinP1I | GCGC | 4 cut(s) | 25, 1723, 2342, 3192 |
| HincII | GTYRAC | 4 cut(s) | 502, 583, 2557, 3328 |
| HindII | GTYRAC | 4 cut(s) | 502, 583, 2557, 3328 |
| HindIII | AAGCTT | 1 cut(s) | 3024 |
| HpaI | GTTAAC | 1 cut(s) | 502 |
| HpaII | CCGG | 4 cut(s) | 278, 586, 840, 1766 |
| HphI | GGTGA | 3 cut(s) | 617, 2185, 3749 |
| Hpy166II | GTNNAC | 9 cut(s) | 233, 502, 583, 848, 1688, 2420, 2557, 3328, 3508 |
| Hpy8I | GTNNAC | 9 cut(s) | 233, 502, 583, 848, 1688, 2420, 2557, 3328, 3508 |
| Hpy99I | CGWCG | 2 cut(s) | 1680, 3544 |
| HpyCH4III | ACNGT | 8 cut(s) | 340, 580, 813, 824, 1353, 1925, 2089, 2561 |
| HpyCH4IV | ACGT | 6 cut(s) | 144, 1025, 3123, 3213, 3468, 3539 |
| HpySE526I | ACGT | 6 cut(s) | 144, 1025, 3123, 3213, 3468, 3539 |
| HspAI | GCGC | 4 cut(s) | 25, 1723, 2342, 3192 |
| Kpn2I | TCCGGA | 2 cut(s) | 277, 839 |
| Ksp22I | TGATCA | 2 cut(s) | 2091, 3739 |
| KspAI | GTTAAC | 1 cut(s) | 502 |
| LguI | GCTCTTC | 4 cut(s) | 100, 752, 1099, 2292 |
| LmnI | GCTCC | 6 cut(s) | 256, 1018, 1973, 3199, 3410, 3673 |
| Lsp1109I | GCAGC | 8 cut(s) | 9, 1629, 1870, 2380, 2536, 3430, 3772, 3800 |
| LweI | GCATC | 9 cut(s) | 346, 763, 862, 980, 1429, 1768, 2211, 2295, 2380 |
| MabI | ACCWGGT | 1 cut(s) | 3433 |
| MaeII | ACGT | 6 cut(s) | 144, 1025, 3123, 3213, 3468, 3539 |
| MfeI | CAATTG | 1 cut(s) | 2205 |
| MflI | RGATCY | 4 cut(s) | 588, 731, 1506, 2125 |
| MhlI | GDGCHC | 8 cut(s) | 112, 293, 1063, 1690, 1869, 2149, 3415, 4010 |
| MlyI | GAGTC | 8 cut(s) | 1247, 1645, 1767, 3065, 3102, 3539, 3916, 4007 |
| MmeI | TCCRAC | 5 cut(s) | 1884, 2245, 2427, 3101, 3989 |
| Mph1103I | ATGCAT | 1 cut(s) | 217 |
| MroI | TCCGGA | 2 cut(s) | 277, 839 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2806, 2862, 3777 |
| MslI | CAYNNNNRTG | 4 cut(s) | 365, 1424, 2385, 3303 |
| MspCI | CTTAAG | 1 cut(s) | 1853 |
| MspI | CCGG | 4 cut(s) | 278, 586, 840, 1766 |
| MunI | CAATTG | 1 cut(s) | 2205 |
| Mva1269I | GAATGC | 2 cut(s) | 467, 662 |
| MvnI | CGCG | 1 cut(s) | 484 |
| NcoI | CCATGG | 1 cut(s) | 3690 |
| NdeI | CATATG | 2 cut(s) | 1234, 3010 |
| NheI | GCTAGC | 1 cut(s) | 596 |
| NlaIV | GGNNCC | 6 cut(s) | 252, 590, 1014, 1062, 2538, 3493 |
| NmuCI | GTSAC | 5 cut(s) | 199, 323, 2761, 3794, 3919 |
| NsbI | TGCGCA | 3 cut(s) | 26, 1724, 2343 |
| NsiI | ATGCAT | 1 cut(s) | 217 |
| NspI | RCATGY | 4 cut(s) | 207, 1903, 3287, 3419 |
| NspV | TTCGAA | 1 cut(s) | 981 |
| PaeI | GCATGC | 1 cut(s) | 3287 |
| PagI | TCATGA | 1 cut(s) | 1566 |
| PasI | CCCWGGG | 1 cut(s) | 3386 |
| PceI | AGGCCT | 1 cut(s) | 2480 |
| PciI | ACATGT | 1 cut(s) | 1899 |
| PciSI | GCTCTTC | 4 cut(s) | 100, 752, 1099, 2292 |
| PctI | GAATGC | 2 cut(s) | 467, 662 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2806, 2862, 3777 |
| PflFI | GACNNNGTC | 2 cut(s) | 989, 1308 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3713 |
| PfoI | TCCNGGA | 1 cut(s) | 1470 |
| PkrI | GCNGC | 8 cut(s) | 24, 1619, 1860, 2395, 2551, 3445, 3787, 3790 |
| PleI | GAGTC | 8 cut(s) | 1247, 1645, 1766, 3065, 3102, 3538, 3916, 4006 |
| PpsI | GAGTC | 8 cut(s) | 1247, 1645, 1766, 3065, 3102, 3538, 3916, 4006 |
| PpuMI | RGGWCCY | 1 cut(s) | 3337 |
| PscI | ACATGT | 1 cut(s) | 1899 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2562 |
| PsiI | TTATAA | 1 cut(s) | 54 |
| Psp124BI | GAGCTC | 2 cut(s) | 112, 2149 |
| Psp1406I | AACGTT | 1 cut(s) | 1025 |
| Psp5II | RGGWCCY | 1 cut(s) | 3337 |
| PspFI | CCCAGC | 2 cut(s) | 2051, 2426 |
| PspN4I | GGNNCC | 6 cut(s) | 252, 590, 1014, 1062, 2538, 3493 |
| PspPI | GGNCC | 3 cut(s) | 897, 2789, 3337 |
| PspPPI | RGGWCCY | 1 cut(s) | 3337 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1584, 1616 |
| PstI | CTGCAG | 4 cut(s) | 2554, 2815, 3790, 3882 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3877 |
| PsuI | RGATCY | 4 cut(s) | 588, 731, 1506, 2125 |
| PsyI | GACNNNGTC | 2 cut(s) | 989, 1308 |
| RsaI | GTAC | 4 cut(s) | 847, 1355, 1927, 3126 |
| RsaNI | GTAC | 4 cut(s) | 846, 1354, 1926, 3125 |
| RseI | CAYNNNNRTG | 4 cut(s) | 365, 1424, 2385, 3303 |
| SacI | GAGCTC | 2 cut(s) | 112, 2149 |
| SapI | GCTCTTC | 4 cut(s) | 100, 752, 1099, 2292 |
| SatI | GCNGC | 8 cut(s) | 23, 1618, 1859, 2394, 2550, 3444, 3786, 3789 |
| Sau96I | GGNCC | 3 cut(s) | 897, 2789, 3337 |
| ScaI | AGTACT | 1 cut(s) | 1355 |
| SchI | GAGTC | 8 cut(s) | 1247, 1645, 1767, 3065, 3102, 3539, 3916, 4007 |
| SduI | GDGCHC | 8 cut(s) | 112, 293, 1063, 1690, 1869, 2149, 3415, 4010 |
| SexAI | ACCWGGT | 1 cut(s) | 3433 |
| SfaNI | GCATC | 9 cut(s) | 346, 763, 862, 980, 1429, 1768, 2211, 2295, 2380 |
| SfcI | CTRYAG | 6 cut(s) | 169, 2550, 2568, 2811, 3786, 3878 |
| SfuI | TTCGAA | 1 cut(s) | 981 |
| SinI | GGWCC | 3 cut(s) | 897, 2789, 3337 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 365, 1424, 2385, 3303 |
| SmlI | CTYRAG | 2 cut(s) | 1853, 3677 |
| SmoI | CTYRAG | 2 cut(s) | 1853, 3677 |
| SphI | GCATGC | 1 cut(s) | 3287 |
| SseBI | AGGCCT | 1 cut(s) | 2480 |
| SsiI | CCGC | 5 cut(s) | 344, 482, 1109, 3671, 3869 |
| SspI | AATATT | 1 cut(s) | 1634 |
| SstI | GAGCTC | 2 cut(s) | 112, 2149 |
| StuI | AGGCCT | 1 cut(s) | 2480 |
| StyI | CCWWGG | 1 cut(s) | 3690 |
| TaaI | ACNGT | 8 cut(s) | 340, 580, 813, 824, 1353, 1925, 2089, 2561 |
| TaiI | ACGT | 6 cut(s) | 147, 1028, 3126, 3216, 3471, 3542 |
| TaqI | TCGA | 8 cut(s) | 562, 780, 981, 1761, 1999, 2152, 2317, 2327 |
| TaqII | GACCGA | 1 cut(s) | 54 |
| TatI | WGTACW | 2 cut(s) | 1353, 1925 |
| TscAI | CASTG | 4 cut(s) | 855, 1269, 2094, 3718 |
| TseFI | GTSAC | 5 cut(s) | 199, 323, 2761, 3794, 3919 |
| TseI | GCWGC | 8 cut(s) | 22, 1617, 1858, 2393, 2549, 3443, 3785, 3788 |
| Tsp45I | GTSAC | 5 cut(s) | 199, 323, 2761, 3794, 3919 |
| TspGWI | ACGGA | 3 cut(s) | 2337, 2780, 3212 |
| TspRI | CASTG | 4 cut(s) | 855, 1269, 2094, 3718 |
| Tth111I | GACNNNGTC | 2 cut(s) | 989, 1308 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3713 |
| Vha464I | CTTAAG | 1 cut(s) | 1853 |
| VneI | GTGCAC | 1 cut(s) | 1686 |
| VpaK11BI | GGWCC | 3 cut(s) | 897, 2789, 3337 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 3102, 3384 |
| XbaI | TCTAGA | 2 cut(s) | 728, 1459 |
| XceI | RCATGY | 4 cut(s) | 207, 1903, 3287, 3419 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2806, 2862, 3777 |
| ZrmI | AGTACT | 1 cut(s) | 1355 |
| Zsp2I | ATGCAT | 1 cut(s) | 217 |