MD05G1316300.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
44554851 .. 44558003
3153 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1316300.v1.1.491

Sequence Viewer

Length: 1122 bp
ATGCGTTGCAGCTGCTTTGGTGCTTCGGTTGCTGAGAAGAGGAAAAGGAAATCTGGTTCTGGTCAATTTGGCCATGATCTTGATGAGAATGTGCTGGAAAATATCAAGGCTTTCTCTTACAATGAATTAAGATCTGCGACGGATAATTTCCATCCGAGTAACAAGATCGGGCGAGGCGGTTTTGGAACTGTGTACAAGGGAACCCTGACAAGTGGAAAGCATGTTGCTGTCAAGACACTTGCTGCTCAGTCGAAGCAGGGAGTCCGTGAATTCTTAAATGAGATTAACACTATCTCAAATGTCCGGCATCCAAACCTTGTTGAGTTGATTGGGTGCTGTGTTCAGGAAGCTGATCGAGTTTTGGTCTATGAATATGTTGAGAATAAAAGCCTTGATCATGCATTATTAGGTCCAACGAGTAGAACCATCAAACTGGATTGGGAAAAAAGATCAGCCATTTGCTTGGGTACTGCCAGGGGTCTTACGTATCTTCATGAAGAACTGGTGCCACATATTGTACATAGAGATATCAAGGCTAGTAATTTACTTTTAGACAGAGAATTTAACCCGAAAATCGGAGACTTTGGGTTGGCTAAACTCTTCCCTGATGATATCACTCATATCAGCACAAGGATTGCGGGCACAACTGGTTATTTGGCACCAGAATATGCATTGGGAGGTCAGTTAACCCTCAAGGCCGACGTTTACAGTTTTGGGGTTCTCGTTCTTGAAATAGTATGTGGAAGAAGCAGTGCCAAGGGAGACTGGGGTGGGGCAGAAAAGTTTCTGCTTGAATGGGCATGGCAGCTCCATGAAGAAGGGAGACTATTGGAGCTAGCTGACCCGGAGATGGGGGAATTTCCGGAGGAAGAAGTCCTTAGGTACATGAAGGTGGCATTTTTCTGCACCCAAGCAGCAGCAAACCGAAGACCAAAGATGAGCCAGGTTCTTGACATGCTCTCGAGAAACATAAGACTCAACGAGAAACAACTTACAGCCCCAGGTTTCTTCAACAGTTCAGGGAGCCTGAGCGGACCTTCAGGTAAAAAGTCATTTTCCGAAACCACTACCAGTCAGATGAGTTCCGTCCCCGACACTATAACTCAAGTAACACCTCGCTGA

Protein Analysis

374

Amino Acids

41.28

Weight (kDa)

7.63

Isoelectric Point (pI)

38.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 51 - 253 7.9e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 53 - 319 1.3e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 505, 658
AccBSI CCGCTC 1 cut(s) 1032
AccIII TCCGGA 1 cut(s) 862
AciI CCGC 3 cut(s) 177, 638, 1032
AcoI YGGCCR 1 cut(s) 70
AcsI RAATTY 3 cut(s) 269, 560, 857
AcuI CTGAAG 1 cut(s) 1023
AfaI GTAC 4 cut(s) 194, 469, 519, 884
AfiI CCNNNNNNNGG 3 cut(s) 575, 850, 851
AgsI TTSAA 3 cut(s) 731, 794, 1012
AjnI CCWGG 3 cut(s) 473, 942, 1000
AloI GAACNNNNNNTCC 2 cut(s) 40, 72
AluBI AGCT 5 cut(s) 12, 350, 808, 835, 839
AluI AGCT 5 cut(s) 12, 350, 808, 835, 839
Alw26I GTCTC 3 cut(s) 573, 756, 817
Ama87I CYCGRG 1 cut(s) 961
Aor13HI TCCGGA 1 cut(s) 862
AoxI GGCC 2 cut(s) 70, 696
ApeKI GCWGC 6 cut(s) 9, 12, 242, 805, 914, 917
ApoI RAATTY 3 cut(s) 269, 560, 857
Asp700I GAANNNNTTC 1 cut(s) 783
AspS9I GGNCC 2 cut(s) 410, 1034
AsuC2I CCSGG 1 cut(s) 845
AsuNHI GCTAGC 1 cut(s) 835
AvaI CYCGRG 1 cut(s) 961
AvaII GGWCC 2 cut(s) 410, 1034
AxyI CCTNAGG 1 cut(s) 878
BaeGI GKGCMC 1 cut(s) 644
BalI TGGCCA 1 cut(s) 72
BanI GGYRCC 2 cut(s) 505, 658
BbsI GAAGAC 1 cut(s) 934
BbvI GCAGC 5 cut(s) 21, 229, 817, 926, 929
BccI CCATC 3 cut(s) 159, 434, 844
BciT130I CCWGG 3 cut(s) 475, 944, 1002
BclI TGATCA 1 cut(s) 394
BcnI CCSGG 1 cut(s) 845
BcoDI GTCTC 3 cut(s) 573, 756, 817
BfaI CTAG 2 cut(s) 537, 836
BglII AGATCT 1 cut(s) 131
BisI GCNGC 6 cut(s) 10, 13, 243, 806, 915, 918
BlsI GCNGC 6 cut(s) 11, 14, 244, 807, 916, 919
Bme1390I CCNGG 4 cut(s) 475, 845, 944, 1002
Bme18I GGWCC 2 cut(s) 410, 1034
BmeT110I CYCGRG 1 cut(s) 961
BmgT120I GGNCC 2 cut(s) 410, 1034
BmiI GGNNCC 4 cut(s) 202, 507, 660, 1025
BmrFI CCNGG 4 cut(s) 475, 845, 944, 1002
BmrI ACTGGG 1 cut(s) 775
BmsI GCATC 1 cut(s) 316
BmtI GCTAGC 1 cut(s) 839
BmuI ACTGGG 1 cut(s) 775
BpiI GAAGAC 1 cut(s) 934
Bpu10I CCTNAGC 1 cut(s) 1028
BpuEI CTTGAG 2 cut(s) 677, 1089
BpuMI CCSGG 1 cut(s) 845
BsaAI YACGTR 1 cut(s) 486
BsaJI CCNNGG 3 cut(s) 474, 756, 1000
BsaWI WCCGGW 1 cut(s) 862
Bsc4I CCNNNNNNNGG 3 cut(s) 575, 850, 851
Bse1I ACTGG 5 cut(s) 438, 507, 652, 770, 1071
Bse21I CCTNAGG 1 cut(s) 878
BseAI TCCGGA 1 cut(s) 862
BseBI CCWGG 3 cut(s) 475, 944, 1002
BseDI CCNNGG 3 cut(s) 474, 756, 1000
BseGI GGATG 2 cut(s) 151, 307
BseLI CCNNNNNNNGG 3 cut(s) 575, 850, 851
BseMII CTCAG 3 cut(s) 24, 260, 1019
BseNI ACTGG 5 cut(s) 438, 507, 652, 770, 1071
BseSI GKGCMC 1 cut(s) 644
BseXI GCAGC 5 cut(s) 21, 229, 817, 926, 929
BsgI GTGCAG 1 cut(s) 889
BshFI GGCC 2 cut(s) 72, 698
BshNI GGYRCC 2 cut(s) 505, 658
BsiHKCI CYCGRG 1 cut(s) 961
BsiSI CCGG 3 cut(s) 304, 845, 863
BslFI GGGAC 1 cut(s) 1073
BslI CCNNNNNNNGG 3 cut(s) 575, 850, 851
BsmAI GTCTC 3 cut(s) 573, 756, 817
BsmFI GGGAC 1 cut(s) 1073
BsnI GGCC 2 cut(s) 72, 698
BsoBI CYCGRG 1 cut(s) 961
Bsp1286I GDGCHC 1 cut(s) 644
Bsp13I TCCGGA 1 cut(s) 862
Bsp1407I TGTACA 2 cut(s) 192, 517
Bsp143I GATC 6 cut(s) 76, 131, 165, 352, 394, 449
BspACI CCGC 3 cut(s) 177, 638, 1032
BspANI GGCC 2 cut(s) 72, 698
BspCNI CTCAG 3 cut(s) 25, 259, 1020
BspEI TCCGGA 1 cut(s) 862
BspHI TCATGA 1 cut(s) 493
BspLI GGNNCC 4 cut(s) 202, 507, 660, 1025
BspOI GCTAGC 1 cut(s) 839
BspT107I GGYRCC 2 cut(s) 505, 658
BsrBI CCGCTC 1 cut(s) 1032
BsrGI TGTACA 2 cut(s) 192, 517
BsrI ACTGG 5 cut(s) 438, 507, 652, 770, 1071
BssECI CCNNGG 3 cut(s) 474, 756, 1000
BssMI GATC 6 cut(s) 76, 131, 165, 352, 394, 449
BssT1I CCWWGG 1 cut(s) 756
Bst2UI CCWGG 3 cut(s) 475, 944, 1002
Bst4CI ACNGT 3 cut(s) 190, 710, 1016
Bst6I CTCTTC 2 cut(s) 32, 605
BstAUI TGTACA 2 cut(s) 192, 517
BstBAI YACGTR 1 cut(s) 486
BstC8I GCNNGC 2 cut(s) 640, 837
BstDEI CTNAG 4 cut(s) 33, 246, 878, 1028
BstF5I GGATG 2 cut(s) 151, 307
BstKTI GATC 6 cut(s) 79, 134, 168, 355, 397, 452
BstMAI GTCTC 3 cut(s) 573, 756, 817
BstMBI GATC 6 cut(s) 76, 131, 165, 352, 394, 449
BstMWI GCNNNNNNNGC 1 cut(s) 29
BstNI CCWGG 3 cut(s) 475, 944, 1002
BstNSI RCATGY 2 cut(s) 224, 958
BstSCI CCNGG 4 cut(s) 473, 843, 942, 1000
BstSLI GKGCMC 1 cut(s) 644
BstSNI TACGTA 1 cut(s) 486
BstV1I GCAGC 5 cut(s) 21, 229, 817, 926, 929
BstV2I GAAGAC 1 cut(s) 934
BstX2I RGATCY 1 cut(s) 131
BstXI CCANNNNNNTGG 2 cut(s) 433, 463
BstYI RGATCY 1 cut(s) 131
Bsu36I CCTNAGG 1 cut(s) 878
BsuRI GGCC 2 cut(s) 72, 698
BtsCI GGATG 2 cut(s) 151, 307
BtsI GCAGTG 1 cut(s) 757
BtsIMutI CAGTG 1 cut(s) 757
Cac8I GCNNGC 2 cut(s) 640, 837
CciI TCATGA 1 cut(s) 493
Cfr13I GGNCC 2 cut(s) 410, 1034
Csp6I GTAC 4 cut(s) 193, 468, 518, 883
CviAII CATG 8 cut(s) 74, 221, 398, 494, 801, 812, 886, 955
CviQI GTAC 4 cut(s) 193, 468, 518, 883
DdeI CTNAG 4 cut(s) 33, 246, 878, 1028
DpnI GATC 6 cut(s) 78, 133, 167, 354, 396, 451
DpnII GATC 6 cut(s) 76, 131, 165, 352, 394, 449
EaeI YGGCCR 1 cut(s) 70
Eam1104I CTCTTC 2 cut(s) 32, 605
EarI CTCTTC 2 cut(s) 32, 605
Eco105I TACGTA 1 cut(s) 486
Eco130I CCWWGG 1 cut(s) 756
Eco32I GATATC 2 cut(s) 529, 613
Eco47I GGWCC 2 cut(s) 410, 1034
Eco57I CTGAAG 1 cut(s) 1023
Eco81I CCTNAGG 1 cut(s) 878
Eco88I CYCGRG 1 cut(s) 961
EcoRI GAATTC 1 cut(s) 269
EcoRII CCWGG 3 cut(s) 473, 942, 1000
EcoRV GATATC 2 cut(s) 529, 613
EcoT14I CCWWGG 1 cut(s) 756
EcoT22I ATGCAT 2 cut(s) 403, 673
ErhI CCWWGG 1 cut(s) 756
FaeI CATG 8 cut(s) 77, 224, 401, 497, 804, 815, 889, 958
FalI AAGNNNNNCTT 2 cut(s) 861, 893
FaqI GGGAC 1 cut(s) 1073
FatI CATG 8 cut(s) 73, 220, 397, 493, 800, 811, 885, 954
FauI CCCGC 1 cut(s) 631
FbaI TGATCA 1 cut(s) 394
Fnu4HI GCNGC 6 cut(s) 10, 13, 243, 806, 915, 918
FokI GGATG 2 cut(s) 138, 294
Fsp4HI GCNGC 6 cut(s) 10, 13, 243, 806, 915, 918
FspBI CTAG 2 cut(s) 537, 836
GluI GCNGC 6 cut(s) 10, 13, 243, 806, 915, 918
HaeIII GGCC 2 cut(s) 72, 698
HapII CCGG 3 cut(s) 304, 845, 863
Hin1II CATG 8 cut(s) 77, 224, 401, 497, 804, 815, 889, 958
HincII GTYRAC 1 cut(s) 687
HindII GTYRAC 1 cut(s) 687
HinfI GANTC 2 cut(s) 261, 975
HpaI GTTAAC 1 cut(s) 687
HpaII CCGG 3 cut(s) 304, 845, 863
Hpy166II GTNNAC 3 cut(s) 193, 687, 706
Hpy188I TCNGA 4 cut(s) 156, 578, 1060, 1077
Hpy188III TCNNGA 9 cut(s) 80, 232, 344, 494, 728, 863, 950, 961, 963
Hpy8I GTNNAC 3 cut(s) 193, 687, 706
Hpy99I CGWCG 2 cut(s) 142, 704
HpyAV CCTTC 3 cut(s) 812, 883, 1047
HpyCH4III ACNGT 3 cut(s) 190, 710, 1016
HpyCH4IV ACGT 2 cut(s) 485, 702
HpyCH4V TGCA 4 cut(s) 9, 401, 671, 906
HpyF10VI GCNNNNNNNGC 1 cut(s) 29
HpyF3I CTNAG 4 cut(s) 33, 246, 878, 1028
HpySE526I ACGT 2 cut(s) 485, 702
Hsp92II CATG 8 cut(s) 77, 224, 401, 497, 804, 815, 889, 958
Kpn2I TCCGGA 1 cut(s) 862
Ksp22I TGATCA 1 cut(s) 394
KspAI GTTAAC 1 cut(s) 687
Kzo9I GATC 6 cut(s) 76, 131, 165, 352, 394, 449
LmnI GCTCC 3 cut(s) 813, 832, 1023
Lsp1109I GCAGC 5 cut(s) 21, 229, 817, 926, 929
LweI GCATC 1 cut(s) 316
MaeI CTAG 2 cut(s) 537, 836
MaeII ACGT 2 cut(s) 485, 702
MaeIII GTNAC 2 cut(s) 158, 1108
MalI GATC 6 cut(s) 78, 133, 167, 354, 396, 451
MbiI CCGCTC 1 cut(s) 1032
MboI GATC 6 cut(s) 76, 131, 165, 352, 394, 449
MboII GAAGA 9 cut(s) 49, 482, 509, 592, 756, 827, 881, 939, 1000
MflI RGATCY 1 cut(s) 131
MhlI GDGCHC 1 cut(s) 644
MlsI TGGCCA 1 cut(s) 72
MluCI AATT 7 cut(s) 65, 125, 145, 269, 541, 560, 857
MluNI TGGCCA 1 cut(s) 72
MlyI GAGTC 2 cut(s) 270, 969
MmeI TCCRAC 1 cut(s) 437
MnlI CCTC 5 cut(s) 33, 167, 671, 701, 859
Mox20I TGGCCA 1 cut(s) 72
Mph1103I ATGCAT 2 cut(s) 403, 673
MroI TCCGGA 1 cut(s) 862
MroXI GAANNNNTTC 1 cut(s) 783
MscI TGGCCA 1 cut(s) 72
MseI TTAA 5 cut(s) 128, 275, 285, 564, 686
MslI CAYNNNNRTG 1 cut(s) 890
Msp20I TGGCCA 1 cut(s) 72
MspA1I CMGCKG 1 cut(s) 12
MspI CCGG 3 cut(s) 304, 845, 863
MspR9I CCNGG 4 cut(s) 475, 845, 944, 1002
MvaI CCWGG 3 cut(s) 475, 944, 1002
MwoI GCNNNNNNNGC 1 cut(s) 29
NciI CCSGG 1 cut(s) 845
NdeII GATC 6 cut(s) 76, 131, 165, 352, 394, 449
NheI GCTAGC 1 cut(s) 835
NlaIII CATG 8 cut(s) 77, 224, 401, 497, 804, 815, 889, 958
NlaIV GGNNCC 4 cut(s) 202, 507, 660, 1025
NsiI ATGCAT 2 cut(s) 403, 673
NspI RCATGY 2 cut(s) 224, 958
PaeR7I CTCGAG 1 cut(s) 961
PagI TCATGA 1 cut(s) 493
PdmI GAANNNNTTC 1 cut(s) 783
PkrI GCNGC 6 cut(s) 11, 14, 244, 807, 916, 919
PleI GAGTC 2 cut(s) 269, 969
PpsI GAGTC 2 cut(s) 269, 969
Ppu21I YACGTR 1 cut(s) 486
Psp6I CCWGG 3 cut(s) 473, 942, 1000
PspGI CCWGG 3 cut(s) 473, 942, 1000
PspN4I GGNNCC 4 cut(s) 202, 507, 660, 1025
PspPI GGNCC 2 cut(s) 410, 1034
PsuI RGATCY 1 cut(s) 131
PvuII CAGCTG 1 cut(s) 12
RsaI GTAC 4 cut(s) 194, 469, 519, 884
RsaNI GTAC 4 cut(s) 193, 468, 518, 883
RseI CAYNNNNRTG 1 cut(s) 890
SaqAI TTAA 5 cut(s) 128, 275, 285, 564, 686
SatI GCNGC 6 cut(s) 10, 13, 243, 806, 915, 918
Sau3AI GATC 6 cut(s) 76, 131, 165, 352, 394, 449
Sau96I GGNCC 2 cut(s) 410, 1034
SchI GAGTC 2 cut(s) 270, 969
ScrFI CCNGG 4 cut(s) 475, 845, 944, 1002
SduI GDGCHC 1 cut(s) 644
SfaNI GCATC 1 cut(s) 316
Sfr274I CTCGAG 1 cut(s) 961
SinI GGWCC 2 cut(s) 410, 1034
SlaI CTCGAG 1 cut(s) 961
SmiMI CAYNNNNRTG 1 cut(s) 890
SmlI CTYRAG 3 cut(s) 692, 961, 1104
SmoI CTYRAG 3 cut(s) 692, 961, 1104
SnaBI TACGTA 1 cut(s) 486
Sse9I AATT 7 cut(s) 65, 125, 145, 269, 541, 560, 857
SsiI CCGC 3 cut(s) 177, 638, 1032
SspMI CTAG 2 cut(s) 537, 836
StyD4I CCNGG 4 cut(s) 473, 843, 942, 1000
StyI CCWWGG 1 cut(s) 756
TaaI ACNGT 3 cut(s) 190, 710, 1016
TaiI ACGT 2 cut(s) 488, 705
TaqI TCGA 3 cut(s) 251, 355, 962
TasI AATT 7 cut(s) 65, 125, 145, 269, 541, 560, 857
TatI WGTACW 2 cut(s) 192, 517
Tru1I TTAA 5 cut(s) 128, 275, 285, 564, 686
Tru9I TTAA 5 cut(s) 128, 275, 285, 564, 686
TscAI CASTG 1 cut(s) 757
TseI GCWGC 6 cut(s) 9, 12, 242, 805, 914, 917
TspDTI ATGAA 6 cut(s) 138, 384, 482, 510, 828, 902
TspGWI ACGGA 3 cut(s) 155, 254, 1075
TspRI CASTG 1 cut(s) 757
VpaK11BI GGWCC 2 cut(s) 410, 1034
XapI RAATTY 3 cut(s) 269, 560, 857
XceI RCATGY 2 cut(s) 224, 958
XhoI CTCGAG 1 cut(s) 961
XmnI GAANNNNTTC 1 cut(s) 783
XspI CTAG 2 cut(s) 537, 836
Zsp2I ATGCAT 2 cut(s) 403, 673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.