Rh3DG126900

Flocculation protein FLO11-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000913
Physical Location & Seq
Forward (+)
10721410 .. 10725496
4087 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG126900.1

Sequence Viewer

Length: 1338 bp
ATGTTGTCCAGGCTAATTACTCCACCTGCTACCCCACTATTTCCATCCTTGGAGATGGAACCGCAAAAGACTTCAGTTAGTCAGATTGAGGAACCTAATGCGCGTGATTCTGCTCCTCCAAAATCTAGGCTAGCAAACACAAAGTTAGAGGCTGCTTCAGACAGCAAAATAGCATCTAAGCAGTCAACATTGCCGTCACGACCAAATTCTTCCAGTACTAGTAACAGGAGGCCCTCACCATCAAGAGGGCCAACAGCTGCTCCTCGTAGATCTGCAACACCAACTGGACGGCCCACCACATTACCTTCATCAACCAAGCCATCAAGGTCCTCCACACCCAATTCACGAACCACCTTACCATCTGCTAAGCCAGTGGCTCCTACAGTGAGGTCCTCAACTCCTTCTAGATCCACCGTGCGTTCTTCTACACCAACTGGCAGATCTTCTGTCCCAGCTTCTAAGACAACATCAAGATCAGCAACACCAACTCGCCTACCAAGTTCATCAAGTACACCTGCACTGTCTGCTCCTCGTGGCCGTTCTTCTTCAGTATCAAAGTCAGCTCCCCCAAGTTCGAAAAATCCTGCGCCATCACGTGGAAGTTCTCCAACAGTAAAATCTAGGTCCTCGAAATCCTCAGATATGCCTGCTTTCTCACTTGATGCTCCACCAAATTTGAGAACCACTTTGCCACAAAGGCCAAATTCAGCCTCTAGGGCTCGTCCTGGGGCACCAAGTGTTAGATCATCTTCTGTTGGAGCTGTTTCTAGTGGAAAACCTAGACAGCAATCATGTTCACCTTCTAGAGGAAGGGCTTCACATGGCATTGCCAGTACTAATGGGTACTCTCGTCAAGTCACAAGTAAATCATCTCCCAATGACAGTGATGATGTAAATCCTGTACTTATGGGGACCCAAAGTGTTGAGAGAGTAGTGAACCAGAGGAAATTGGCACCACCAAAGCAGTATGACCATTCTACTCAGAAGAATCCTGATGGGAAGTCTTTGTCCTCTGACAGCTTAGGCTTTGGAAGAACACTTTCAAAGAAATCCTTCGATATGGCTATGAGACACATGGATATAAGGCGAAGCGTGCAAGATAACCTACATCCTGTTCTGACAAAAGTTCCAGCCTCCTCTGTGTACAGTGTCCGGACAAGACCAACAAAAAGCAAGACTACTAATGCTACGGATTCTCCTCTTGCCACATGCAGCAATGCTAGCTCTGAACCAAGTGTCAACAATATTTCTGCATACTTTGAAGGTTGTGAAATTGAGGACATTGATCATGGAAGTGAGAAAGGAAACTCCTCTCCAGCATGCCAGCAAGGCAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

445

Amino Acids

46.78

Weight (kDa)

11.21

Isoelectric Point (pI)

81.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 34, 523, 1323
Acc36I ACCTGC 3 cut(s) 34, 523, 1323
AccB1I GGYRCC 2 cut(s) 730, 952
AccB7I CCANNNNNTGG 1 cut(s) 596
AccII CGCG 1 cut(s) 103
AccIII TCCGGA 1 cut(s) 1152
AciI CCGC 1 cut(s) 62
AclWI GGATC 1 cut(s) 402
AcoI YGGCCR 1 cut(s) 535
AcsI RAATTY 3 cut(s) 205, 673, 703
AcuI CTGAAG 3 cut(s) 57, 141, 531
AcvI CACGTG 1 cut(s) 596
AdeI CACNNNGTG 1 cut(s) 737
AfaI GTAC 6 cut(s) 217, 511, 835, 845, 903, 1145
AfiI CCNNNNNNNGG 3 cut(s) 245, 596, 806
AgsI TTSAA 2 cut(s) 1044, 1262
AhlI ACTAGT 1 cut(s) 218
AjnI CCWGG 2 cut(s) 8, 724
AluBI AGCT 6 cut(s) 257, 455, 563, 761, 1020, 1224
AluI AGCT 6 cut(s) 257, 455, 563, 761, 1020, 1224
Alw26I GTCTC 1 cut(s) 1063
AlwI GGATC 1 cut(s) 402
Aor13HI TCCGGA 1 cut(s) 1152
AoxI GGCC 5 cut(s) 230, 248, 290, 535, 698
ApeKI GCWGC 3 cut(s) 152, 257, 1212
ApoI RAATTY 3 cut(s) 205, 673, 703
Asp700I GAANNNNTTC 3 cut(s) 814, 1039, 1052
AspLEI GCGC 2 cut(s) 103, 589
AspS9I GGNCC 7 cut(s) 231, 248, 291, 327, 390, 624, 912
AsuHPI GGTGA 2 cut(s) 228, 789
AsuII TTCGAA 1 cut(s) 575
AsuNHI GCTAGC 2 cut(s) 130, 1220
AvaII GGWCC 4 cut(s) 327, 390, 624, 912
BaeGI GKGCMC 1 cut(s) 733
BaeI ACNNNNGTAYC 2 cut(s) 835, 868
BanI GGYRCC 2 cut(s) 730, 952
BanII GRGCYC 1 cut(s) 721
BauI CACGAG 1 cut(s) 531
BbrPI CACGTG 1 cut(s) 596
BbvI GCAGC 3 cut(s) 139, 244, 1224
BccI CCATC 7 cut(s) 49, 52, 247, 328, 367, 598, 989
BceAI ACGGC 3 cut(s) 178, 305, 522
BciT130I CCWGG 2 cut(s) 10, 726
BclI TGATCA 1 cut(s) 1285
BcoDI GTCTC 1 cut(s) 1063
BcuI ACTAGT 1 cut(s) 218
BfmI CTRYAG 1 cut(s) 381
BfuAI ACCTGC 3 cut(s) 34, 523, 1323
BglI GCCNNNNNGGC 3 cut(s) 697, 716, 1329
BglII AGATCT 2 cut(s) 269, 440
BisI GCNGC 3 cut(s) 153, 258, 1213
BlpI GCTNAGC 1 cut(s) 366
BlsI GCNGC 3 cut(s) 154, 259, 1214
BmcAI AGTACT 2 cut(s) 217, 835
Bme1390I CCNGG 2 cut(s) 10, 726
Bme18I GGWCC 4 cut(s) 327, 390, 624, 912
BmgT120I GGNCC 7 cut(s) 231, 248, 291, 327, 390, 624, 912
BmiI GGNNCC 7 cut(s) 60, 93, 378, 732, 913, 914, 954
BmrFI CCNGG 2 cut(s) 10, 726
BmsI GCATC 2 cut(s) 182, 652
BmtI GCTAGC 2 cut(s) 134, 1224
BpmI CTGGAG 1 cut(s) 1299
Bpu10I CCTNAGC 1 cut(s) 1021
Bpu1102I GCTNAGC 1 cut(s) 366
Bpu14I TTCGAA 1 cut(s) 575
BsaAI YACGTR 1 cut(s) 596
BsaBI GATNNNNATC 1 cut(s) 894
BsaJI CCNNGG 2 cut(s) 48, 725
BsaWI WCCGGW 1 cut(s) 1152
BsaXI ACNNNNNCTCC 4 cut(s) 244, 274, 1180, 1210
Bsc4I CCNNNNNNNGG 3 cut(s) 245, 596, 806
Bse1I ACTGG 5 cut(s) 213, 289, 371, 439, 831
Bse3DI GCAATG 3 cut(s) 188, 825, 1222
Bse8I GATNNNNATC 1 cut(s) 894
BseAI TCCGGA 1 cut(s) 1152
BseBI CCWGG 2 cut(s) 10, 726
BseDI CCNNGG 2 cut(s) 48, 725
BseGI GGATG 2 cut(s) 44, 1108
BseJI GATNNNNATC 1 cut(s) 894
BseLI CCNNNNNNNGG 3 cut(s) 245, 596, 806
BseMI GCAATG 3 cut(s) 188, 825, 1222
BseMII CTCAG 2 cut(s) 651, 995
BseNI ACTGG 5 cut(s) 213, 289, 371, 439, 831
BseRI GAGGAG 6 cut(s) 105, 252, 519, 1126, 1188, 1300
BseSI GKGCMC 1 cut(s) 733
BseXI GCAGC 3 cut(s) 139, 244, 1224
BseYI CCCAGC 1 cut(s) 451
BsgI GTGCAG 1 cut(s) 501
Bsh1236I CGCG 1 cut(s) 103
BshFI GGCC 5 cut(s) 232, 250, 292, 537, 700
BshNI GGYRCC 2 cut(s) 730, 952
BsiSI CCGG 1 cut(s) 1153
BslFI GGGAC 2 cut(s) 434, 925
BslI CCNNNNNNNGG 3 cut(s) 245, 596, 806
BsmAI GTCTC 1 cut(s) 1063
BsmFI GGGAC 2 cut(s) 434, 925
BsnI GGCC 5 cut(s) 232, 250, 292, 537, 700
Bsp119I TTCGAA 1 cut(s) 575
Bsp1286I GDGCHC 2 cut(s) 721, 733
Bsp13I TCCGGA 1 cut(s) 1152
Bsp1407I TGTACA 1 cut(s) 1143
Bsp143I GATC 6 cut(s) 269, 407, 440, 473, 743, 1285
Bsp1720I GCTNAGC 1 cut(s) 366
BspACI CCGC 1 cut(s) 62
BspANI GGCC 5 cut(s) 232, 250, 292, 537, 700
BspCNI CTCAG 2 cut(s) 650, 994
BspEI TCCGGA 1 cut(s) 1152
BspFNI CGCG 1 cut(s) 103
BspLI GGNNCC 7 cut(s) 60, 93, 378, 732, 913, 914, 954
BspMI ACCTGC 3 cut(s) 34, 523, 1323
BspOI GCTAGC 2 cut(s) 134, 1224
BspPI GGATC 1 cut(s) 402
BspT104I TTCGAA 1 cut(s) 575
BspT107I GGYRCC 2 cut(s) 730, 952
BsrDI GCAATG 3 cut(s) 188, 825, 1222
BsrGI TGTACA 1 cut(s) 1143
BsrI ACTGG 5 cut(s) 213, 289, 371, 439, 831
BssECI CCNNGG 2 cut(s) 48, 725
BssMI GATC 6 cut(s) 269, 407, 440, 473, 743, 1285
BssSI CACGAG 1 cut(s) 531
BssT1I CCWWGG 1 cut(s) 48
Bst2BI CACGAG 1 cut(s) 531
Bst2UI CCWGG 2 cut(s) 10, 726
Bst4CI ACNGT 6 cut(s) 385, 415, 522, 613, 884, 1148
BstAPI GCANNNNNTGC 1 cut(s) 524
BstAUI TGTACA 1 cut(s) 1143
BstBAI YACGTR 1 cut(s) 596
BstBI TTCGAA 1 cut(s) 575
BstC8I GCNNGC 6 cut(s) 132, 648, 1094, 1222, 1321, 1325
BstDEI CTNAG 6 cut(s) 177, 366, 459, 637, 981, 1021
BstENI CCTNNNNNAGG 1 cut(s) 804
BstF5I GGATG 2 cut(s) 44, 1108
BstFNI CGCG 1 cut(s) 103
BstHHI GCGC 2 cut(s) 103, 589
BstKTI GATC 6 cut(s) 272, 410, 443, 476, 746, 1288
BstMAI GTCTC 1 cut(s) 1063
BstMBI GATC 6 cut(s) 269, 407, 440, 473, 743, 1285
BstMWI GCNNNNNNNGC 6 cut(s) 524, 697, 716, 1093, 1221, 1329
BstNI CCWGG 2 cut(s) 10, 726
BstNSI RCATGY 2 cut(s) 1212, 1323
BstSCI CCNGG 2 cut(s) 8, 724
BstSFI CTRYAG 1 cut(s) 381
BstSLI GKGCMC 1 cut(s) 733
BstUI CGCG 1 cut(s) 103
BstV1I GCAGC 3 cut(s) 139, 244, 1224
BstX2I RGATCY 3 cut(s) 269, 407, 440
BstYI RGATCY 3 cut(s) 269, 407, 440
BsuRI GGCC 5 cut(s) 232, 250, 292, 537, 700
BtsCI GGATG 2 cut(s) 44, 1108
BtsIMutI CAGTG 5 cut(s) 378, 390, 518, 889, 1153
BveI ACCTGC 3 cut(s) 34, 523, 1323
Cac8I GCNNGC 6 cut(s) 132, 648, 1094, 1222, 1321, 1325
CfoI GCGC 2 cut(s) 103, 589
Cfr13I GGNCC 7 cut(s) 231, 248, 291, 327, 390, 624, 912
Csp6I GTAC 6 cut(s) 216, 510, 834, 844, 902, 1144
CspCI CAANNNNNGTGG 2 cut(s) 657, 692
CviAII CATG 6 cut(s) 792, 821, 1075, 1209, 1289, 1320
CviQI GTAC 6 cut(s) 216, 510, 834, 844, 902, 1144
DdeI CTNAG 6 cut(s) 177, 366, 459, 637, 981, 1021
DpnI GATC 6 cut(s) 271, 409, 442, 475, 745, 1287
DpnII GATC 6 cut(s) 269, 407, 440, 473, 743, 1285
DraIII CACNNNGTG 1 cut(s) 737
EaeI YGGCCR 1 cut(s) 535
Eco130I CCWWGG 1 cut(s) 48
Eco24I GRGCYC 1 cut(s) 721
Eco47I GGWCC 4 cut(s) 327, 390, 624, 912
Eco57I CTGAAG 3 cut(s) 57, 141, 531
Eco72I CACGTG 1 cut(s) 596
EcoNI CCTNNNNNAGG 1 cut(s) 804
EcoO109I RGGNCCY 5 cut(s) 231, 327, 390, 624, 912
EcoRII CCWGG 2 cut(s) 8, 724
EcoT14I CCWWGG 1 cut(s) 48
EcoT38I GRGCYC 1 cut(s) 721
ErhI CCWWGG 1 cut(s) 48
FaeI CATG 6 cut(s) 795, 824, 1078, 1212, 1292, 1323
FalI AAGNNNNNCTT 2 cut(s) 1037, 1069
FaqI GGGAC 2 cut(s) 434, 925
FatI CATG 6 cut(s) 791, 820, 1074, 1208, 1288, 1319
FbaI TGATCA 1 cut(s) 1285
Fnu4HI GCNGC 3 cut(s) 153, 258, 1213
FokI GGATG 2 cut(s) 31, 1095
FriOI GRGCYC 1 cut(s) 721
Fsp4HI GCNGC 3 cut(s) 153, 258, 1213
GlaI GCGC 2 cut(s) 102, 588
GluI GCNGC 3 cut(s) 153, 258, 1213
GsaI CCCAGC 1 cut(s) 455
GsuI CTGGAG 1 cut(s) 1299
HaeIII GGCC 5 cut(s) 232, 250, 292, 537, 700
HapII CCGG 1 cut(s) 1153
HhaI GCGC 2 cut(s) 103, 589
Hin1II CATG 6 cut(s) 795, 824, 1078, 1212, 1292, 1323
Hin6I GCGC 2 cut(s) 101, 587
HinP1I GCGC 2 cut(s) 101, 587
HincII GTYRAC 2 cut(s) 186, 1240
HindII GTYRAC 2 cut(s) 186, 1240
HinfI GANTC 3 cut(s) 107, 988, 1193
HpaII CCGG 1 cut(s) 1153
HphI GGTGA 2 cut(s) 228, 789
Hpy166II GTNNAC 6 cut(s) 186, 512, 797, 937, 1144, 1240
Hpy188I TCNGA 7 cut(s) 84, 160, 640, 984, 1015, 1119, 1228
Hpy188III TCNNGA 8 cut(s) 198, 243, 345, 405, 471, 804, 992, 1153
Hpy8I GTNNAC 6 cut(s) 186, 512, 797, 937, 1144, 1240
HpyAV CCTTC 6 cut(s) 315, 411, 804, 810, 1063, 1256
HpyCH4III ACNGT 6 cut(s) 385, 415, 522, 613, 884, 1148
HpyCH4IV ACGT 1 cut(s) 595
HpyCH4V TGCA 5 cut(s) 275, 518, 1096, 1212, 1253
HpyF10VI GCNNNNNNNGC 6 cut(s) 524, 697, 716, 1093, 1221, 1329
HpyF3I CTNAG 6 cut(s) 177, 366, 459, 637, 981, 1021
HpySE526I ACGT 1 cut(s) 595
Hsp92II CATG 6 cut(s) 795, 824, 1078, 1212, 1292, 1323
HspAI GCGC 2 cut(s) 101, 587
KflI GGGWCCC 1 cut(s) 912
Kpn2I TCCGGA 1 cut(s) 1152
Ksp22I TGATCA 1 cut(s) 1285
Kzo9I GATC 6 cut(s) 269, 407, 440, 473, 743, 1285
LmnI GCTCC 7 cut(s) 118, 265, 382, 532, 568, 670, 758
Lsp1109I GCAGC 3 cut(s) 139, 244, 1224
LweI GCATC 2 cut(s) 182, 652
MaeII ACGT 1 cut(s) 595
MaeIII GTNAC 3 cut(s) 195, 221, 856
MalI GATC 6 cut(s) 271, 409, 442, 475, 745, 1287
MboI GATC 6 cut(s) 269, 407, 440, 473, 743, 1285
MboII GAAGA 8 cut(s) 201, 414, 435, 534, 537, 741, 997, 1044
MflI RGATCY 3 cut(s) 269, 407, 440
MhlI GDGCHC 2 cut(s) 721, 733
MluCI AATT 7 cut(s) 15, 205, 340, 673, 703, 947, 1272
MmeI TCCRAC 2 cut(s) 632, 736
MroI TCCGGA 1 cut(s) 1152
MroXI GAANNNNTTC 3 cut(s) 814, 1039, 1052
MslI CAYNNNNRTG 1 cut(s) 1293
MspA1I CMGCKG 1 cut(s) 257
MspI CCGG 1 cut(s) 1153
MspR9I CCNGG 2 cut(s) 10, 726
MvaI CCWGG 2 cut(s) 10, 726
MvnI CGCG 1 cut(s) 103
MwoI GCNNNNNNNGC 6 cut(s) 524, 697, 716, 1093, 1221, 1329
NdeII GATC 6 cut(s) 269, 407, 440, 473, 743, 1285
NheI GCTAGC 2 cut(s) 130, 1220
NlaIII CATG 6 cut(s) 795, 824, 1078, 1212, 1292, 1323
NlaIV GGNNCC 7 cut(s) 60, 93, 378, 732, 913, 914, 954
NmuCI GTSAC 2 cut(s) 195, 856
NspI RCATGY 2 cut(s) 1212, 1323
NspV TTCGAA 1 cut(s) 575
PaeI GCATGC 1 cut(s) 1323
PaqCI CACCTGC 3 cut(s) 34, 523, 1323
PdmI GAANNNNTTC 3 cut(s) 814, 1039, 1052
PfeI GAWTC 3 cut(s) 107, 988, 1193
PflMI CCANNNNNTGG 1 cut(s) 596
PkrI GCNGC 3 cut(s) 154, 259, 1214
PmaCI CACGTG 1 cut(s) 596
PmlI CACGTG 1 cut(s) 596
Ppu21I YACGTR 1 cut(s) 596
PpuMI RGGWCCY 4 cut(s) 327, 390, 624, 912
Psp5II RGGWCCY 4 cut(s) 327, 390, 624, 912
Psp6I CCWGG 2 cut(s) 8, 724
PspCI CACGTG 1 cut(s) 596
PspFI CCCAGC 1 cut(s) 451
PspGI CCWGG 2 cut(s) 8, 724
PspN4I GGNNCC 7 cut(s) 60, 93, 378, 732, 913, 914, 954
PspPI GGNCC 7 cut(s) 231, 248, 291, 327, 390, 624, 912
PspPPI RGGWCCY 4 cut(s) 327, 390, 624, 912
PsuI RGATCY 3 cut(s) 269, 407, 440
PvuII CAGCTG 1 cut(s) 257
RsaI GTAC 6 cut(s) 217, 511, 835, 845, 903, 1145
RsaNI GTAC 6 cut(s) 216, 510, 834, 844, 902, 1144
RseI CAYNNNNRTG 1 cut(s) 1293
SatI GCNGC 3 cut(s) 153, 258, 1213
Sau3AI GATC 6 cut(s) 269, 407, 440, 473, 743, 1285
Sau96I GGNCC 7 cut(s) 231, 248, 291, 327, 390, 624, 912
ScaI AGTACT 2 cut(s) 217, 835
ScrFI CCNGG 2 cut(s) 10, 726
SduI GDGCHC 2 cut(s) 721, 733
SfaNI GCATC 2 cut(s) 182, 652
SfcI CTRYAG 1 cut(s) 381
SfuI TTCGAA 1 cut(s) 575
SinI GGWCC 4 cut(s) 327, 390, 624, 912
SmiMI CAYNNNNRTG 1 cut(s) 1293
SpeI ACTAGT 1 cut(s) 218
SphI GCATGC 1 cut(s) 1323
Sse9I AATT 7 cut(s) 15, 205, 340, 673, 703, 947, 1272
SsiI CCGC 1 cut(s) 62
SspI AATATT 1 cut(s) 1246
StyD4I CCNGG 2 cut(s) 8, 724
StyI CCWWGG 1 cut(s) 48
TaaI ACNGT 6 cut(s) 385, 415, 522, 613, 884, 1148
TaiI ACGT 1 cut(s) 598
TaqI TCGA 3 cut(s) 575, 629, 1056
TasI AATT 7 cut(s) 15, 205, 340, 673, 703, 947, 1272
TatI WGTACW 5 cut(s) 215, 509, 833, 901, 1143
TfiI GAWTC 3 cut(s) 107, 988, 1193
TscAI CASTG 5 cut(s) 378, 390, 525, 889, 1153
TseFI GTSAC 2 cut(s) 195, 856
TseI GCWGC 3 cut(s) 152, 257, 1212
Tsp45I GTSAC 2 cut(s) 195, 856
TspDTI ATGAA 2 cut(s) 297, 492
TspGWI ACGGA 1 cut(s) 1205
TspRI CASTG 5 cut(s) 378, 390, 525, 889, 1153
Van91I CCANNNNNTGG 1 cut(s) 596
VpaK11BI GGWCC 4 cut(s) 327, 390, 624, 912
XagI CCTNNNNNAGG 1 cut(s) 804
XapI RAATTY 3 cut(s) 205, 673, 703
XbaI TCTAGA 2 cut(s) 404, 803
XceI RCATGY 2 cut(s) 1212, 1323
XmnI GAANNNNTTC 3 cut(s) 814, 1039, 1052
ZrmI AGTACT 2 cut(s) 217, 835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.