Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001022

Physical Location & Seq

Genomic Coordinates Forward (+)

19687740 .. 19690661

Gene Structure 2922 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G53110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGGCGGATACGGTAGAGAAAGTTCCCACCGTTGTTGAGTCATCTTCATCATCCACCGTTGAAGCATCTAATAGCGCCGAGAAGACTGAGCCCACGACGGAGAAGAAAAAGTGGGGCGATGTTGAAGATGATGATGATGAAGAAGAAGCTGTATCGGAGCTTAATTCATTGAGCATTAAGGAAGAAGAGAAACCTGATTCTATTCTTGAGGAACCTGAAGATTCTAACATCAAAGCTGTTACTTCTGGTGACACACCATATACATCAGCAAGTAGATTTGAAGACTTGAACTTGTCACCTGAATTGATGAAAGGCTTGTACGTTGAGATGAAATTCGAAAAGCCTAGCAAGATCCAAGCTATTAGTTTGCCTATGATAATGACGCCGCCACACAAGCATCTGATTGCCCAGGCTCATAACGGATCTGGAAAGACGACTTGTTTCGTTCTTGGAATGTTGAGTCGTGTTGATCCCACATTGAGAGAGCCTCAAGCTCTCTGTATTTGTCCCACTAGAGAATTAGCTAATCAGAATATGGAAGTTCTTCAGAAGATGGGGAAGTTTACTGGGATCACTGCTGAGTTGGCTGTGCCTGACTCAACGAGAGGTGCACCGGCGGCAACAAGAGGAGCTCCTGTTTCTGCTCATGTTGTGATTGGCACCCCTGGAACGCTTAAGAAATGGATGGCATTTAAGAGACTAGGTCTAAATCATTTGAAGATTCTGGTTTTTGATGAGGCTGACCATATGCTTGCTACGGATGGGTTTAGGGATGATTCCTTGAAGATAATGAAAGACATTGGGAGAGTTAATCCCAATTTCCAGGTTCTTCTTTTCTCGGCAACTTTTAACGAAACTGTCAAAGATTTTGTTGCGCGGACAGTCAAAGATCCCAACCAATTGTTTGTCAAAAGAGAGGATCTGGCTTTGGACTCGGTGAAGCAGTATAAAGTTGTTTGCCCGAAGGAGCAAAACAAGATCGAAGTCATCAAGGATCAGATTATGGAGCTTGGGGATATTGGGCAAACCATTATCTTTGTGAAAACAAAAGCGTCTGCTCAAAAGGTGCACAAAGCCCTTGCGGAAATGGGATATGACGTTACCAGTGTCCATGGTAATCTGACTGAATCGGACAGGGATAAGATAGTTAAAGAGTTTAAAGAATGCCTTACTCAAGTGCTCATTGCTACCGATGTCATTGCAAGAGGTTTTGACCAACAGCGGGTGAATTTGGTTGTCAATTATAATCTTCCCACTAAATATGAAACTGGAGAGCCAGATTATGAGGTGTACCTTCACAGGGTTGGGAGAGCTGGCCGGTTTGGTCGCAAAGGAGCGGTTTTCAACTTGCTGCTTGATGATGGCTGGGATAAAGAGGTGATGGAGAAGATCGAGAAGTATTTTGAAGCAAATGTTAAGGAGATCAAGTCGTGGAACTCAGAGGAAGAGTATAAGAGTGCATTAAAGGAAGCTGGCCTGCTGGACGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005730 GO:0005737 GO:0005886 GO:0006139 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0008026 GO:0008104 GO:0008150 GO:0008152 GO:0008186 GO:0009266 GO:0009408 GO:0009409 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0010501 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0016973 GO:0017111 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033993 GO:0034613 GO:0034641 GO:0042221 GO:0042623 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070035 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0090304 GO:0097305 GO:0140098 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

496

Amino Acids

55.38

Weight (kDa)

5.18

Isoelectric Point (pI)

31.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	117 - 290	3.6e-37	DEAD/DEAH box helicase
ResIII	PF04851	130 - 284	1.6e-08	Type III restriction enzyme, res subunit
Helicase_C	PF00271	326 - 442	3.3e-26	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001022)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53110
fragaria_vesca	FvH4_6g17230 FvH4_6g17230 FvH4_6g17230 FvH4_6g17280 FvH4_6g17280
malus_domestica	MD12G1102600.v1.1 MD14G1096800.v1.1
prunus_persica	Prupe.3G009100_v2.0.a1 Prupe.7G122600_v2.0.a1
pyrus_communis	pycom03g08760 pycom12g10060 pycom14g09450
rosa_chinensis	RchiOBHm_Chr3g0471311 RchiOBHm_Chr3g0471321 RchiOBHm_Chr3g0471361 RchiOBHm_Chr3g0471391
rosa_laevigata	RLG00000024181 RLG00000024187 RLG00000024188
rosa_multiflora	Rmu_sc0006582.1_g000015 Rmu_sc0006582.1_g000018 Rmu_sc0009082.1_g000003 Rmu_sc0010513.1_g000003 Rmu_sc0015755.1_g000002 Rmu_sc0030425.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409980 Rroxscaffold_6G00410000 Rroxscaffold_6G00410060 Rroxscaffold_6G00410080
rosa_rugosa	Rorug03G0117100 Rorug03G0117100 Rorug03G0117100 Rorug03G0117400 Rorug03G0117500 Rorug03G0117500
rosa_samantha	Rh3AG166500 Rh3AG166600 Rh3AG166700 Rh3AG167100 Rh3BG191900 Rh3BG192000 Rh3BG192100 Rh3BG192400 Rh3BG192500 Rh3BG192800 Rh3CG182200 Rh3CG182300 Rh3CG182400 Rh3CG182700 Rh3CG182800 Rh3CG183200 Rh3DG182700 Rh3DG183100 Rh3DG183200 Rh3DG183700 Rh3DG183800
rosa_wichuraiana	Rw3G015670 Rw3G015680 Rw3G015730 Rw3G015760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1245
AccB1I	GGYRCC	1 cut(s)	659
AccBSI	CCGCTC	1 cut(s)	1337
AccII	CGCG	1 cut(s)	877
AciI	CCGC	7 cut(s)	5, 386, 617, 877, 1082, 1222, 1337
AclWI	GGATC	7 cut(s)	346, 430, 464, 578, 884, 927, 1002
AcoI	YGGCCR	1 cut(s)	1315
AcsI	RAATTY	2 cut(s)	332, 1228
AcuI	CTGAAG	2 cut(s)	237, 530
AcyI	GRCGYC	1 cut(s)	383
AfaI	GTAC	2 cut(s)	320, 1292
AfiI	CCNNNNNNNGG	2 cut(s)	1222, 1300
AflII	CTTAAG	1 cut(s)	674
AgsI	TTSAA	8 cut(s)	62, 125, 281, 289, 718, 784, 1345, 1406
AjnI	CCWGG	3 cut(s)	408, 664, 822
Alw21I	GWGCWC	4 cut(s)	613, 634, 1071, 1182
Alw26I	GTCTC	1 cut(s)	691
Alw44I	GTGCAC	2 cut(s)	609, 1067
AlwI	GGATC	7 cut(s)	346, 430, 464, 578, 884, 927, 1002
AoxI	GGCC	2 cut(s)	1315, 1474
ApaLI	GTGCAC	2 cut(s)	609, 1067
ApeKI	GCWGC	1 cut(s)	1351
ApoI	RAATTY	2 cut(s)	332, 1228
Asp700I	GAANNNNTTC	1 cut(s)	543
AspLEI	GCGC	2 cut(s)	77, 877
AsuHPI	GGTGA	5 cut(s)	260, 288, 949, 1237, 1390
AsuII	TTCGAA	1 cut(s)	336
BaeGI	GKGCMC	2 cut(s)	613, 1071
BanI	GGYRCC	1 cut(s)	659
BanII	GRGCYC	2 cut(s)	93, 634
BbsI	GAAGAC	2 cut(s)	89, 288
Bbv12I	GWGCWC	4 cut(s)	613, 634, 1071, 1182
BbvI	GCAGC	1 cut(s)	1338
BccI	CCATC	5 cut(s)	547, 679, 755, 1355, 1375
BcgI	CGANNNNNNTGC	2 cut(s)	1181, 1215
BciT130I	CCWGG	3 cut(s)	410, 666, 824
BcoDI	GTCTC	1 cut(s)	691
BfaI	CTAG	3 cut(s)	345, 513, 701
BfoI	RGCGCY	1 cut(s)	78
BfrI	CTTAAG	1 cut(s)	674
BisI	GCNGC	3 cut(s)	386, 618, 1352
BlsI	GCNGC	3 cut(s)	387, 619, 1353
Bme1390I	CCNGG	3 cut(s)	410, 666, 824
BmiI	GGNNCC	2 cut(s)	213, 661
BmrFI	CCNGG	3 cut(s)	410, 666, 824
BmrI	ACTGGG	1 cut(s)	576
BmsI	GCATC	2 cut(s)	74, 406
BmuI	ACTGGG	1 cut(s)	576
BpiI	GAAGAC	2 cut(s)	89, 288
BplI	GAGNNNNNCTC	2 cut(s)	472, 504
BpmI	CTGGAG	1 cut(s)	1290
Bpu14I	TTCGAA	1 cut(s)	336
BpuEI	CTTGAG	3 cut(s)	227, 474, 1158
BsaHI	GRCGYC	1 cut(s)	383
BsaJI	CCNNGG	3 cut(s)	408, 664, 1111
BsaXI	ACNNNNNCTCC	4 cut(s)	621, 651, 1412, 1442
Bsc4I	CCNNNNNNNGG	2 cut(s)	1222, 1300
Bse118I	RCCGGY	2 cut(s)	613, 1317
Bse1I	ACTGG	3 cut(s)	571, 1104, 1273
Bse3DI	GCAATG	2 cut(s)	1182, 1197
BseBI	CCWGG	3 cut(s)	410, 666, 824
BseDI	CCNNGG	3 cut(s)	408, 664, 1111
BseGI	GGATG	4 cut(s)	50, 690, 766, 778
BseLI	CCNNNNNNNGG	2 cut(s)	1222, 1300
BseMI	GCAATG	2 cut(s)	1182, 1197
BseMII	CTCAG	3 cut(s)	78, 570, 1452
BseNI	ACTGG	3 cut(s)	571, 1104, 1273
BseRI	GAGGAG	1 cut(s)	642
BseSI	GKGCMC	2 cut(s)	613, 1071
BseXI	GCAGC	1 cut(s)	1338
BseYI	CCCAGC	1 cut(s)	1365
Bsh1236I	CGCG	1 cut(s)	877
BshFI	GGCC	2 cut(s)	1317, 1476
BshNI	GGYRCC	1 cut(s)	659
BsiHKAI	GWGCWC	4 cut(s)	613, 634, 1071, 1182
BsiSI	CCGG	2 cut(s)	614, 1318
BslFI	GGGAC	1 cut(s)	492
BslI	CCNNNNNNNGG	2 cut(s)	1222, 1300
BsmAI	GTCTC	1 cut(s)	691
BsmFI	GGGAC	1 cut(s)	492
BsmI	GAATGC	1 cut(s)	1169
BsnI	GGCC	2 cut(s)	1317, 1476
Bsp119I	TTCGAA	1 cut(s)	336
Bsp1286I	GDGCHC	5 cut(s)	93, 613, 634, 1071, 1182
Bsp19I	CCATGG	1 cut(s)	1111
BspACI	CCGC	7 cut(s)	5, 386, 617, 877, 1082, 1222, 1337
BspANI	GGCC	2 cut(s)	1317, 1476
BspCNI	CTCAG	3 cut(s)	79, 571, 1451
BspFNI	CGCG	1 cut(s)	877
BspLI	GGNNCC	2 cut(s)	213, 661
BspPI	GGATC	7 cut(s)	346, 430, 464, 578, 884, 927, 1002
BspT104I	TTCGAA	1 cut(s)	336
BspT107I	GGYRCC	1 cut(s)	659
BspTI	CTTAAG	1 cut(s)	674
BsrBI	CCGCTC	1 cut(s)	1337
BsrDI	GCAATG	2 cut(s)	1182, 1197
BsrFI	RCCGGY	2 cut(s)	613, 1317
BsrI	ACTGG	3 cut(s)	571, 1104, 1273
BssAI	RCCGGY	2 cut(s)	613, 1317
BssECI	CCNNGG	3 cut(s)	408, 664, 1111
BssNI	GRCGYC	1 cut(s)	383
BssT1I	CCWWGG	1 cut(s)	1111
Bst2UI	CCWGG	3 cut(s)	410, 666, 824
Bst4CI	ACNGT	5 cut(s)	13, 31, 58, 859, 883
Bst6I	CTCTTC	2 cut(s)	180, 1440
BstACI	GRCGYC	1 cut(s)	383
BstAFI	CTTAAG	1 cut(s)	674
BstBI	TTCGAA	1 cut(s)	336
BstC8I	GCNNGC	4 cut(s)	753, 1315, 1474, 1478
BstDEI	CTNAG	3 cut(s)	87, 579, 1438
BstDSI	CCRYGG	1 cut(s)	1111
BstF5I	GGATG	4 cut(s)	50, 690, 766, 778
BstFNI	CGCG	1 cut(s)	877
BstH2I	RGCGCY	1 cut(s)	78
BstHHI	GCGC	2 cut(s)	77, 877
BstMAI	GTCTC	1 cut(s)	691
BstMWI	GCNNNNNNNGC	3 cut(s)	394, 584, 617
BstNI	CCWGG	3 cut(s)	410, 666, 824
BstSCI	CCNGG	3 cut(s)	408, 664, 822
BstSLI	GKGCMC	2 cut(s)	613, 1071
BstUI	CGCG	1 cut(s)	877
BstV1I	GCAGC	1 cut(s)	1338
BstV2I	GAAGAC	2 cut(s)	89, 288
BstX2I	RGATCY	4 cut(s)	351, 422, 889, 919
BstYI	RGATCY	4 cut(s)	351, 422, 889, 919
BsuRI	GGCC	2 cut(s)	1317, 1476
BtgI	CCRYGG	1 cut(s)	1111
BtgZI	GCGATG	1 cut(s)	132
BtsCI	GGATG	4 cut(s)	50, 690, 766, 778
BtsI	GCAGTG	1 cut(s)	573
BtsIMutI	CAGTG	2 cut(s)	573, 1111
Cac8I	GCNNGC	4 cut(s)	753, 1315, 1474, 1478
CfoI	GCGC	2 cut(s)	77, 877
Cfr10I	RCCGGY	2 cut(s)	613, 1317
CseI	GACGC	2 cut(s)	391, 1041
Csp6I	GTAC	2 cut(s)	319, 1291
CspCI	CAANNNNNGTGG	2 cut(s)	16, 51
CviAII	CATG	2 cut(s)	647, 1112
CviQI	GTAC	2 cut(s)	319, 1291
DdeI	CTNAG	3 cut(s)	87, 579, 1438
DraI	TTTAAA	1 cut(s)	1159
EaeI	YGGCCR	1 cut(s)	1315
Eam1104I	CTCTTC	2 cut(s)	180, 1440
EarI	CTCTTC	2 cut(s)	180, 1440
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	1 cut(s)	632
Eco130I	CCWWGG	1 cut(s)	1111
Eco24I	GRGCYC	2 cut(s)	93, 634
Eco53kI	GAGCTC	1 cut(s)	632
Eco57I	CTGAAG	2 cut(s)	237, 530
EcoICRI	GAGCTC	1 cut(s)	632
EcoRII	CCWGG	3 cut(s)	408, 664, 822
EcoT14I	CCWWGG	1 cut(s)	1111
EcoT38I	GRGCYC	2 cut(s)	93, 634
ErhI	CCWWGG	1 cut(s)	1111
FaeI	CATG	2 cut(s)	650, 1115
FalI	AAGNNNNNCTT	2 cut(s)	1152, 1184
FaqI	GGGAC	1 cut(s)	492
FatI	CATG	2 cut(s)	646, 1111
FauI	CCCGC	1 cut(s)	1215
FauNDI	CATATG	1 cut(s)	747
Fnu4HI	GCNGC	3 cut(s)	386, 618, 1352
FokI	GGATG	4 cut(s)	37, 697, 773, 785
FriOI	GRGCYC	2 cut(s)	93, 634
Fsp4HI	GCNGC	3 cut(s)	386, 618, 1352
FspBI	CTAG	3 cut(s)	345, 513, 701
GlaI	GCGC	2 cut(s)	76, 876
GluI	GCNGC	3 cut(s)	386, 618, 1352
GsaI	CCCAGC	1 cut(s)	1369
GsuI	CTGGAG	1 cut(s)	1290
HaeII	RGCGCY	1 cut(s)	78
HaeIII	GGCC	2 cut(s)	1317, 1476
HapII	CCGG	2 cut(s)	614, 1318
HgaI	GACGC	2 cut(s)	391, 1041
HhaI	GCGC	2 cut(s)	77, 877
Hin1I	GRCGYC	1 cut(s)	383
Hin1II	CATG	2 cut(s)	650, 1115
Hin6I	GCGC	2 cut(s)	75, 875
HinP1I	GCGC	2 cut(s)	75, 875
HinfI	GANTC	9 cut(s)	38, 197, 221, 460, 596, 721, 776, 932, 1127
HpaII	CCGG	2 cut(s)	614, 1318
HphI	GGTGA	5 cut(s)	260, 288, 949, 1237, 1390
Hpy166II	GTNNAC	4 cut(s)	564, 611, 1069, 1291
Hpy188I	TCNGA	8 cut(s)	157, 402, 531, 549, 999, 1122, 1132, 1441
Hpy188III	TCNNGA	3 cut(s)	206, 426, 1393
Hpy8I	GTNNAC	4 cut(s)	564, 611, 1069, 1291
Hpy99I	CGWCG	1 cut(s)	100
HpyAV	CCTTC	2 cut(s)	958, 1304
HpyCH4III	ACNGT	5 cut(s)	13, 31, 58, 859, 883
HpyCH4IV	ACGT	2 cut(s)	321, 1098
HpyCH4V	TGCA	4 cut(s)	611, 1069, 1202, 1460
HpyF10VI	GCNNNNNNNGC	3 cut(s)	394, 584, 617
HpyF3I	CTNAG	3 cut(s)	87, 579, 1438
HpySE526I	ACGT	2 cut(s)	321, 1098
Hsp92I	GRCGYC	1 cut(s)	383
Hsp92II	CATG	2 cut(s)	650, 1115
HspAI	GCGC	2 cut(s)	75, 875
LmnI	GCTCC	6 cut(s)	157, 629, 637, 967, 1006, 1334
Lsp1109I	GCAGC	1 cut(s)	1338
LweI	GCATC	2 cut(s)	74, 406
MaeI	CTAG	3 cut(s)	345, 513, 701
MaeII	ACGT	2 cut(s)	321, 1098
MaeIII	GTNAC	4 cut(s)	238, 248, 294, 1099
MbiI	CCGCTC	1 cut(s)	1337
MfeI	CAATTG	1 cut(s)	899
MflI	RGATCY	4 cut(s)	351, 422, 889, 919
MhlI	GDGCHC	5 cut(s)	93, 613, 634, 1071, 1182
MluCI	AATT	8 cut(s)	163, 302, 332, 518, 817, 899, 1228, 1240
MlyI	GAGTC	4 cut(s)	47, 469, 590, 926
MroXI	GAANNNNTTC	1 cut(s)	543
MspA1I	CMGCKG	1 cut(s)	1222
MspCI	CTTAAG	1 cut(s)	674
MspI	CCGG	2 cut(s)	614, 1318
MspR9I	CCNGG	3 cut(s)	410, 666, 824
MunI	CAATTG	1 cut(s)	899
Mva1269I	GAATGC	1 cut(s)	1169
MvaI	CCWGG	3 cut(s)	410, 666, 824
MvnI	CGCG	1 cut(s)	877
MwoI	GCNNNNNNNGC	3 cut(s)	394, 584, 617
NcoI	CCATGG	1 cut(s)	1111
NdeI	CATATG	1 cut(s)	747
NlaIII	CATG	2 cut(s)	650, 1115
NlaIV	GGNNCC	2 cut(s)	213, 661
NmeAIII	GCCGAG	2 cut(s)	103, 818
NmuCI	GTSAC	2 cut(s)	248, 294
NspV	TTCGAA	1 cut(s)	336
PctI	GAATGC	1 cut(s)	1169
PdmI	GAANNNNTTC	1 cut(s)	543
PfeI	GAWTC	5 cut(s)	197, 221, 721, 776, 1127
PflFI	GACNNNGTC	1 cut(s)	702
PkrI	GCNGC	3 cut(s)	387, 619, 1353
PleI	GAGTC	4 cut(s)	46, 468, 590, 926
PpsI	GAGTC	4 cut(s)	46, 468, 590, 926
PsiI	TTATAA	1 cut(s)	1245
Psp124BI	GAGCTC	1 cut(s)	634
Psp6I	CCWGG	3 cut(s)	408, 664, 822
PspFI	CCCAGC	1 cut(s)	1365
PspGI	CCWGG	3 cut(s)	408, 664, 822
PspN4I	GGNNCC	2 cut(s)	213, 661
PsrI	GAACNNNNNNTAC	1 cut(s)	38
PsuI	RGATCY	4 cut(s)	351, 422, 889, 919
PsyI	GACNNNGTC	1 cut(s)	702
RsaI	GTAC	2 cut(s)	320, 1292
RsaNI	GTAC	2 cut(s)	319, 1291
SacI	GAGCTC	1 cut(s)	634
SatI	GCNGC	3 cut(s)	386, 618, 1352
SchI	GAGTC	4 cut(s)	47, 469, 590, 926
ScrFI	CCNGG	3 cut(s)	410, 666, 824
SduI	GDGCHC	5 cut(s)	93, 613, 634, 1071, 1182
SfaNI	GCATC	2 cut(s)	74, 406
SfuI	TTCGAA	1 cut(s)	336
SgrAI	CRCCGGYG	1 cut(s)	613
SmlI	CTYRAG	4 cut(s)	206, 489, 674, 1173
SmoI	CTYRAG	4 cut(s)	206, 489, 674, 1173
Sse9I	AATT	8 cut(s)	163, 302, 332, 518, 817, 899, 1228, 1240
SsiI	CCGC	7 cut(s)	5, 386, 617, 877, 1082, 1222, 1337
SspMI	CTAG	3 cut(s)	345, 513, 701
SstI	GAGCTC	1 cut(s)	634
StyD4I	CCNGG	3 cut(s)	408, 664, 822
StyI	CCWWGG	1 cut(s)	1111
TaaI	ACNGT	5 cut(s)	13, 31, 58, 859, 883
TaiI	ACGT	2 cut(s)	324, 1101
TaqI	TCGA	3 cut(s)	336, 981, 1392
TasI	AATT	8 cut(s)	163, 302, 332, 518, 817, 899, 1228, 1240
TauI	GCSGC	2 cut(s)	388, 620
TfiI	GAWTC	5 cut(s)	197, 221, 721, 776, 1127
TscAI	CASTG	2 cut(s)	580, 1111
TseFI	GTSAC	2 cut(s)	248, 294
TseI	GCWGC	1 cut(s)	1351
Tsp45I	GTSAC	2 cut(s)	248, 294
TspDTI	ATGAA	7 cut(s)	36, 153, 156, 323, 344, 806, 1278
TspGWI	ACGGA	3 cut(s)	113, 435, 773
TspRI	CASTG	2 cut(s)	580, 1111
Tth111I	GACNNNGTC	1 cut(s)	702
Vha464I	CTTAAG	1 cut(s)	674
VneI	GTGCAC	2 cut(s)	609, 1067
XapI	RAATTY	2 cut(s)	332, 1228
XmnI	GAANNNNTTC	1 cut(s)	543
XspI	CTAG	3 cut(s)	345, 513, 701

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.