Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0001022

Physical Location & Seq

Genomic Coordinates Reverse (-)

11205763 .. 11209888

Gene Structure 4126 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g17280.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGGCTGAGACCGACGCCGCCGCCGCAACAACGACGCCACCAGTCGAAACTTCATCCGCCGAGTCCGCCACCACTGCGTCTCCGCCGCCGGCGAAGCCCGTGGTAAAACGCTGGGCCGACGAGGAGGATGATCCGCCGGAGGAGCCGCAGAAAACCGAAGCTCCGTCTACTTCAGAGCAGCCGGAGCTCGATGTCGCCGCACTGAAGATCACCGAGAACAAGTTCCTCGACGAGCCGGAAGACTCTCACATCAGCGCTGTCACGGCCGACGACACGCCGTACACGTCGGCTAGTAGTTTTGAGGATCTGAATCTATCGGAGGCGGTGCTGAAGGGCTTGTATGTAGAGATGGGGTTCAAGAAGCCCAGTAAAATCCAGGCGATCACTTTGCCTATGATTCTGACTCCTCCGCACAAGGATCTGGTTGCTCAGGCCCACAATGGCTCCGGCAAGACGACCTGTTTCGTGCTCGGGATGCTCAGCCGTGTTGATCCCAATGTGAAAGCTCCCCAGGCTCTCTGCATTTGCCCCACTAGAGAGTTGGCTATTCAGAATATGGAGGTTCTTCAAAAGATGGGGAAATACACCGGGATAACTGCAGAGTGTGCTGTCCCTTCAGATAGGGAGAGGAATGCACCTTCGCCTAATCACCGGGCCCCAGTGTCGGCTCAAGTTGTGATTGGAACTCCTGGTACTATCAAGAGATATATGAATATGAAAAAGCTGGGTGTAAACCGCGTGAAGATCCTTGTTTTTGATGAGGCTGATCACATGCTGGCTGAGGATGGCTTCCAAGATGATTCTTTAAGGATAAAGAGGGACACAGAAAAAGCTAGCCCTAACTGCCAGGTTCTTCTGTTTTCAGCTACATTTAATGAAAGAGTCACAAATTTTGTCTCAAGGGTTGTGAAACGTGGTAACAATCAACTTTTTGTCAAGAAAGAAGAGCTATCTTTGGAAGGTGTTAAGCAGTACAAGGTGTACTGTCCTGATGAACTGAGCAAGATTGAGGTTATCAAAACCAAAATTTTTGACCTGGGAGAAAAACTAGGACAGAGGATTATATTTGTTCGGACAAAAAATAGTGCAAGAATGTTGTATCAACAACTTACTGATGATGGTTACGCGGTTACTGCTATTCAAGGTGCCCTCAACACTGAGGACAGAGACAAAATTATCAAAGAGTTTAAAGAGGGTTTAACCCAAGTTCTCATATCAACTGATGTACTTGCCAGAGGCTTTGACCAACAGCAGGTTAATTGTGTCGTCAATTATGATCTTCCAGTCAAATATTCAGCTGGTCCCCGGTCACAACCTTCAGAACCTGATTATGAGGTGTACCTGCATAGAATTGGCAGAGCTGGGCGTTTTGGTCGCAAGGGAGCTGTGTTTAATTTGATTTGCGATGAAAATGATGAGTTGGTCATGTCAAAAATTGAGCAGTATTTTGACATCCAAGTACCAGAGGTTAAGAATACAGATGAGGCTTTTGAAGGGGCTCTTAAAACAGCTGGCTTACTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005730 GO:0005737 GO:0005886 GO:0006139 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0008026 GO:0008104 GO:0008150 GO:0008152 GO:0008186 GO:0009266 GO:0009408 GO:0009409 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0010501 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0016973 GO:0017111 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033993 GO:0034613 GO:0034641 GO:0042221 GO:0042623 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070035 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0090304 GO:0097305 GO:0140098 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

508

Amino Acids

56.08

Weight (kDa)

5.23

Isoelectric Point (pI)

40.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	124 - 296	2e-36	DEAD/DEAH box helicase
ResIII	PF04851	137 - 292	4.5e-08	Type III restriction enzyme, res subunit
Helicase_C	PF00271	340 - 458	6.4e-25	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001022)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53110
fragaria_vesca	FvH4_6g17230 FvH4_6g17230 FvH4_6g17230 FvH4_6g17280 FvH4_6g17280
malus_domestica	MD12G1102600.v1.1 MD14G1096800.v1.1
prunus_persica	Prupe.3G009100_v2.0.a1 Prupe.7G122600_v2.0.a1
pyrus_communis	pycom03g08760 pycom12g10060 pycom14g09450
rosa_chinensis	RchiOBHm_Chr3g0471311 RchiOBHm_Chr3g0471321 RchiOBHm_Chr3g0471361 RchiOBHm_Chr3g0471391
rosa_laevigata	RLG00000024181 RLG00000024187 RLG00000024188
rosa_multiflora	Rmu_sc0006582.1_g000015 Rmu_sc0006582.1_g000018 Rmu_sc0009082.1_g000003 Rmu_sc0010513.1_g000003 Rmu_sc0015755.1_g000002 Rmu_sc0030425.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409980 Rroxscaffold_6G00410000 Rroxscaffold_6G00410060 Rroxscaffold_6G00410080
rosa_rugosa	Rorug03G0117100 Rorug03G0117100 Rorug03G0117100 Rorug03G0117400 Rorug03G0117500 Rorug03G0117500
rosa_samantha	Rh3AG166500 Rh3AG166600 Rh3AG166700 Rh3AG167100 Rh3BG191900 Rh3BG192000 Rh3BG192100 Rh3BG192400 Rh3BG192500 Rh3BG192800 Rh3CG182200 Rh3CG182300 Rh3CG182400 Rh3CG182700 Rh3CG182800 Rh3CG183200 Rh3DG182700 Rh3DG183100 Rh3DG183200 Rh3DG183700 Rh3DG183800
rosa_wichuraiana	Rw3G015670 Rw3G015680 Rw3G015730 Rw3G015760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1243, 1350
AccB1I	GGYRCC	1 cut(s)	1145
AccI	GTMKAC	1 cut(s)	167
AccII	CGCG	2 cut(s)	738, 1127
AclWI	GGATC	5 cut(s)	125, 312, 426, 485, 739
AcoI	YGGCCR	1 cut(s)	264
AcsI	RAATTY	2 cut(s)	889, 1026
AcuI	CTGAAG	5 cut(s)	156, 224, 350, 600, 1302
AcyI	GRCGYC	2 cut(s)	15, 35
AfaI	GTAC	7 cut(s)	281, 694, 974, 983, 1227, 1340, 1461
AfeI	AGCGCT	1 cut(s)	256
AfiI	CCNNNNNNNGG	2 cut(s)	664, 1252
AflIII	ACRYGT	1 cut(s)	282
AgsI	TTSAA	4 cut(s)	358, 569, 1142, 1493
AjiI	CACGTC	1 cut(s)	285
AjnI	CCWGG	5 cut(s)	375, 510, 688, 846, 1035
Alw21I	GWGCWC	2 cut(s)	189, 471
Alw26I	GTCTC	4 cut(s)	2, 84, 901, 1161
AlwI	GGATC	5 cut(s)	125, 312, 426, 485, 739
AlwNI	CAGNNNCTG	1 cut(s)	1325
Ama87I	CYCGRG	1 cut(s)	470
Aor51HI	AGCGCT	1 cut(s)	256
AoxI	GGCC	4 cut(s)	114, 264, 432, 654
ApaI	GGGCCC	1 cut(s)	658
ApeKI	GCWGC	1 cut(s)	178
ApoI	RAATTY	2 cut(s)	889, 1026
Asp700I	GAANNNNTTC	1 cut(s)	221
AspLEI	GCGC	1 cut(s)	257
AspS9I	GGNCC	5 cut(s)	114, 433, 654, 655, 1301
AsuC2I	CCSGG	3 cut(s)	589, 653, 1306
AsuHPI	GGTGA	2 cut(s)	202, 641
AsuNHI	GCTAGC	1 cut(s)	833
AvaI	CYCGRG	1 cut(s)	470
AvaII	GGWCC	1 cut(s)	1301
BaeGI	GKGCMC	2 cut(s)	658, 1150
BanI	GGYRCC	1 cut(s)	1145
BanII	GRGCYC	3 cut(s)	189, 658, 1501
BbsI	GAAGAC	1 cut(s)	246
Bbv12I	GWGCWC	2 cut(s)	189, 471
BbvCI	CCTCAGC	1 cut(s)	780
BbvI	GCAGC	1 cut(s)	190
BccI	CCATC	4 cut(s)	343, 568, 779, 1112
BceAI	ACGGC	3 cut(s)	262, 279, 468
BcgI	CGANNNNNNTGC	2 cut(s)	370, 404
BciT130I	CCWGG	5 cut(s)	377, 512, 690, 848, 1037
BclI	TGATCA	1 cut(s)	766
BcnI	CCSGG	3 cut(s)	589, 653, 1306
BcoDI	GTCTC	4 cut(s)	2, 84, 901, 1161
BfaI	CTAG	4 cut(s)	291, 534, 834, 1049
BfmI	CTRYAG	2 cut(s)	597, 1520
BfoI	RGCGCY	1 cut(s)	258
BfuAI	ACCTGC	2 cut(s)	1243, 1350
BisI	GCNGC	7 cut(s)	18, 21, 24, 86, 146, 179, 198
BlpI	GCTNAGC	1 cut(s)	479
BlsI	GCNGC	7 cut(s)	19, 22, 25, 87, 147, 180, 199
Bme1390I	CCNGG	8 cut(s)	377, 512, 589, 653, 690, 848, 1037, 1306
Bme18I	GGWCC	1 cut(s)	1301
BmeT110I	CYCGRG	1 cut(s)	470
BmgBI	CACGTC	1 cut(s)	285
BmgT120I	GGNCC	5 cut(s)	114, 433, 654, 655, 1301
BmiI	GGNNCC	6 cut(s)	144, 445, 656, 657, 1147, 1303
BmrFI	CCNGG	8 cut(s)	377, 512, 589, 653, 690, 848, 1037, 1306
BmrI	ACTGGG	2 cut(s)	360, 653
BmsI	GCATC	1 cut(s)	465
BmtI	GCTAGC	1 cut(s)	837
BmuI	ACTGGG	2 cut(s)	360, 653
BpiI	GAAGAC	1 cut(s)	246
Bpu10I	CCTNAGC	2 cut(s)	429, 780
Bpu1102I	GCTNAGC	1 cut(s)	479
BpuEI	CTTGAG	2 cut(s)	654, 883
BpuMI	CCSGG	3 cut(s)	589, 653, 1306
BsaBI	GATNNNNATC	1 cut(s)	309
BsaHI	GRCGYC	2 cut(s)	15, 35
BsaI	GGTCTC	1 cut(s)	2
BsaJI	CCNNGG	4 cut(s)	99, 510, 1036, 1304
BsaXI	ACNNNNNCTCC	6 cut(s)	64, 94, 145, 175, 428, 458
Bsc4I	CCNNNNNNNGG	2 cut(s)	664, 1252
Bse118I	RCCGGY	1 cut(s)	88
Bse1I	ACTGG	4 cut(s)	41, 366, 659, 1283
Bse8I	GATNNNNATC	1 cut(s)	309
BseBI	CCWGG	5 cut(s)	377, 512, 690, 848, 1037
BseDI	CCNNGG	4 cut(s)	99, 510, 1036, 1304
BseGI	GGATG	5 cut(s)	53, 133, 480, 790, 1452
BseJI	GATNNNNATC	1 cut(s)	309
BseLI	CCNNNNNNNGG	2 cut(s)	664, 1252
BseMII	CTCAG	5 cut(s)	443, 493, 771, 989, 1149
BseNI	ACTGG	4 cut(s)	41, 366, 659, 1283
BseRI	GAGGAG	3 cut(s)	137, 155, 396
BseSI	GKGCMC	2 cut(s)	658, 1150
BseX3I	CGGCCG	1 cut(s)	264
BseXI	GCAGC	1 cut(s)	190
BseYI	CCCAGC	3 cut(s)	111, 724, 1361
Bsh1236I	CGCG	2 cut(s)	738, 1127
Bsh1285I	CGRYCG	1 cut(s)	267
BshFI	GGCC	4 cut(s)	116, 266, 434, 656
BshNI	GGYRCC	1 cut(s)	1145
BsiEI	CGRYCG	1 cut(s)	267
BsiHKAI	GWGCWC	2 cut(s)	189, 471
BsiHKCI	CYCGRG	1 cut(s)	470
BsiSI	CCGG	8 cut(s)	89, 137, 182, 236, 447, 588, 652, 1306
BslFI	GGGAC	3 cut(s)	596, 833, 1287
BslI	CCNNNNNNNGG	2 cut(s)	664, 1252
BsmAI	GTCTC	4 cut(s)	2, 84, 901, 1161
BsmBI	CGTCTC	1 cut(s)	84
BsmFI	GGGAC	3 cut(s)	596, 833, 1287
BsmI	GAATGC	1 cut(s)	637
BsnI	GGCC	4 cut(s)	116, 266, 434, 656
Bso31I	GGTCTC	1 cut(s)	2
BsoBI	CYCGRG	1 cut(s)	470
Bsp120I	GGGCCC	1 cut(s)	654
Bsp1286I	GDGCHC	5 cut(s)	189, 471, 658, 1150, 1501
Bsp143I	GATC	9 cut(s)	130, 207, 304, 381, 418, 490, 744, 766, 1276
Bsp1720I	GCTNAGC	1 cut(s)	479
BspANI	GGCC	4 cut(s)	116, 266, 434, 656
BspCNI	CTCAG	5 cut(s)	442, 492, 772, 990, 1150
BspFNI	CGCG	2 cut(s)	738, 1127
BspLI	GGNNCC	6 cut(s)	144, 445, 656, 657, 1147, 1303
BspMAI	CTGCAG	1 cut(s)	601
BspMI	ACCTGC	2 cut(s)	1243, 1350
BspOI	GCTAGC	1 cut(s)	837
BspPI	GGATC	5 cut(s)	125, 312, 426, 485, 739
BspQI	GCTCTTC	1 cut(s)	939
BspT107I	GGYRCC	1 cut(s)	1145
BspTNI	GGTCTC	1 cut(s)	2
BsrFI	RCCGGY	1 cut(s)	88
BsrI	ACTGG	4 cut(s)	41, 366, 659, 1283
BssAI	RCCGGY	1 cut(s)	88
BssECI	CCNNGG	4 cut(s)	99, 510, 1036, 1304
BssMI	GATC	9 cut(s)	130, 207, 304, 381, 418, 490, 744, 766, 1276
BssNI	GRCGYC	2 cut(s)	15, 35
Bst2UI	CCWGG	5 cut(s)	377, 512, 690, 848, 1037
Bst4CI	ACNGT	2 cut(s)	986, 1521
Bst6I	CTCTTC	1 cut(s)	939
BstACI	GRCGYC	2 cut(s)	15, 35
BstAPI	GCANNNNNTGC	1 cut(s)	605
BstC8I	GCNNGC	4 cut(s)	90, 777, 835, 1513
BstDEI	CTNAG	6 cut(s)	6, 429, 479, 780, 998, 1158
BstDSI	CCRYGG	1 cut(s)	99
BstF5I	GGATG	5 cut(s)	53, 133, 480, 790, 1452
BstFNI	CGCG	2 cut(s)	738, 1127
BstH2I	RGCGCY	1 cut(s)	258
BstHHI	GCGC	1 cut(s)	257
BstKTI	GATC	9 cut(s)	133, 210, 307, 384, 421, 493, 747, 769, 1279
BstMAI	GTCTC	4 cut(s)	2, 84, 901, 1161
BstMBI	GATC	9 cut(s)	130, 207, 304, 381, 418, 490, 744, 766, 1276
BstMCI	CGRYCG	1 cut(s)	267
BstNI	CCWGG	5 cut(s)	377, 512, 690, 848, 1037
BstNSI	RCATGY	1 cut(s)	775
BstSCI	CCNGG	8 cut(s)	375, 510, 587, 651, 688, 846, 1035, 1304
BstSFI	CTRYAG	2 cut(s)	597, 1520
BstSLI	GKGCMC	2 cut(s)	658, 1150
BstUI	CGCG	2 cut(s)	738, 1127
BstV1I	GCAGC	1 cut(s)	190
BstV2I	GAAGAC	1 cut(s)	246
BstX2I	RGATCY	3 cut(s)	304, 418, 744
BstYI	RGATCY	3 cut(s)	304, 418, 744
BstZI	CGGCCG	1 cut(s)	264
BsuRI	GGCC	4 cut(s)	116, 266, 434, 656
BtgI	CCRYGG	1 cut(s)	99
BtgZI	GCGATG	1 cut(s)	1419
BtrI	CACGTC	1 cut(s)	285
BtsCI	GGATG	5 cut(s)	53, 133, 480, 790, 1452
BtsI	GCAGTG	1 cut(s)	72
BtsIMutI	CAGTG	4 cut(s)	72, 200, 666, 1155
BveI	ACCTGC	2 cut(s)	1243, 1350
Cac8I	GCNNGC	4 cut(s)	90, 777, 835, 1513
CaiI	CAGNNNCTG	1 cut(s)	1325
CfoI	GCGC	1 cut(s)	257
Cfr10I	RCCGGY	1 cut(s)	88
Cfr13I	GGNCC	5 cut(s)	114, 433, 654, 655, 1301
CseI	GACGC	3 cut(s)	23, 43, 66
Csp6I	GTAC	7 cut(s)	280, 693, 973, 982, 1226, 1339, 1460
CviAII	CATG	2 cut(s)	772, 1426
CviQI	GTAC	7 cut(s)	280, 693, 973, 982, 1226, 1339, 1460
DdeI	CTNAG	6 cut(s)	6, 429, 479, 780, 998, 1158
DpnI	GATC	9 cut(s)	132, 209, 306, 383, 420, 492, 746, 768, 1278
DpnII	GATC	9 cut(s)	130, 207, 304, 381, 418, 490, 744, 766, 1276
DraI	TTTAAA	1 cut(s)	1189
EaeI	YGGCCR	1 cut(s)	264
EagI	CGGCCG	1 cut(s)	264
Eam1104I	CTCTTC	1 cut(s)	939
EarI	CTCTTC	1 cut(s)	939
EciI	GGCGGA	4 cut(s)	46, 55, 72, 123
Ecl136II	GAGCTC	1 cut(s)	187
EclXI	CGGCCG	1 cut(s)	264
Eco24I	GRGCYC	3 cut(s)	189, 658, 1501
Eco31I	GGTCTC	1 cut(s)	2
Eco47I	GGWCC	1 cut(s)	1301
Eco47III	AGCGCT	1 cut(s)	256
Eco52I	CGGCCG	1 cut(s)	264
Eco53kI	GAGCTC	1 cut(s)	187
Eco57I	CTGAAG	5 cut(s)	156, 224, 350, 600, 1302
Eco88I	CYCGRG	1 cut(s)	470
EcoICRI	GAGCTC	1 cut(s)	187
EcoO109I	RGGNCCY	1 cut(s)	655
EcoRII	CCWGG	5 cut(s)	375, 510, 688, 846, 1035
EcoT38I	GRGCYC	3 cut(s)	189, 658, 1501
Esp3I	CGTCTC	1 cut(s)	84
FaeI	CATG	2 cut(s)	775, 1429
FalI	AAGNNNNNCTT	2 cut(s)	1485, 1517
FaqI	GGGAC	3 cut(s)	596, 833, 1287
FatI	CATG	2 cut(s)	771, 1425
FbaI	TGATCA	1 cut(s)	766
FblI	GTMKAC	1 cut(s)	167
Fnu4HI	GCNGC	7 cut(s)	18, 21, 24, 86, 146, 179, 198
FokI	GGATG	5 cut(s)	40, 140, 487, 797, 1439
FriOI	GRGCYC	3 cut(s)	189, 658, 1501
Fsp4HI	GCNGC	7 cut(s)	18, 21, 24, 86, 146, 179, 198
FspBI	CTAG	4 cut(s)	291, 534, 834, 1049
GlaI	GCGC	1 cut(s)	256
GluI	GCNGC	7 cut(s)	18, 21, 24, 86, 146, 179, 198
GsaI	CCCAGC	3 cut(s)	115, 728, 1365
HaeII	RGCGCY	1 cut(s)	258
HaeIII	GGCC	4 cut(s)	116, 266, 434, 656
HapII	CCGG	8 cut(s)	89, 137, 182, 236, 447, 588, 652, 1306
HgaI	GACGC	3 cut(s)	23, 43, 66
HhaI	GCGC	1 cut(s)	257
Hin1I	GRCGYC	2 cut(s)	15, 35
Hin1II	CATG	2 cut(s)	775, 1429
Hin6I	GCGC	1 cut(s)	255
HinP1I	GCGC	1 cut(s)	255
HinfI	GANTC	7 cut(s)	62, 242, 310, 397, 403, 800, 882
HpaII	CCGG	8 cut(s)	89, 137, 182, 236, 447, 588, 652, 1306
HphI	GGTGA	2 cut(s)	202, 641
Hpy166II	GTNNAC	5 cut(s)	168, 282, 733, 982, 1339
Hpy188I	TCNGA	8 cut(s)	175, 309, 319, 402, 552, 619, 1074, 1321
Hpy188III	TCNNGA	5 cut(s)	358, 472, 700, 937, 989
Hpy8I	GTNNAC	5 cut(s)	168, 282, 733, 982, 1339
Hpy99I	CGWCG	6 cut(s)	17, 37, 122, 233, 272, 289
HpyAV	CCTTC	6 cut(s)	325, 624, 648, 953, 1326, 1487
HpyCH4III	ACNGT	2 cut(s)	986, 1521
HpyCH4IV	ACGT	2 cut(s)	284, 913
HpyCH4V	TGCA	5 cut(s)	522, 599, 635, 1088, 1345
HpyF3I	CTNAG	6 cut(s)	6, 429, 479, 780, 998, 1158
HpySE526I	ACGT	2 cut(s)	284, 913
Hsp92I	GRCGYC	2 cut(s)	15, 35
Hsp92II	CATG	2 cut(s)	775, 1429
HspAI	GCGC	1 cut(s)	255
KroI	GCCGGC	1 cut(s)	88
KroNI	GCCGGC	1 cut(s)	90
Ksp22I	TGATCA	1 cut(s)	766
Kzo9I	GATC	9 cut(s)	130, 207, 304, 381, 418, 490, 744, 766, 1276
LguI	GCTCTTC	1 cut(s)	939
LmnI	GCTCC	6 cut(s)	142, 166, 184, 449, 511, 1382
Lsp1109I	GCAGC	1 cut(s)	190
LweI	GCATC	1 cut(s)	465
MaeI	CTAG	4 cut(s)	291, 534, 834, 1049
MaeII	ACGT	2 cut(s)	284, 913
MaeIII	GTNAC	6 cut(s)	259, 883, 917, 1121, 1129, 1308
MalI	GATC	9 cut(s)	132, 209, 306, 383, 420, 492, 746, 768, 1278
MboI	GATC	9 cut(s)	130, 207, 304, 381, 418, 490, 744, 766, 1276
MboII	GAAGA	7 cut(s)	217, 251, 557, 754, 845, 956, 1271
MflI	RGATCY	3 cut(s)	304, 418, 744
MhlI	GDGCHC	5 cut(s)	189, 471, 658, 1150, 1501
MluCI	AATT	8 cut(s)	889, 1026, 1173, 1258, 1270, 1350, 1393, 1434
MlyI	GAGTC	4 cut(s)	71, 236, 397, 891
MreI	CGCCGGCG	1 cut(s)	88
MroNI	GCCGGC	1 cut(s)	88
MroXI	GAANNNNTTC	1 cut(s)	221
MseI	TTAA	9 cut(s)	806, 873, 966, 1188, 1199, 1257, 1392, 1470, 1503
MspA1I	CMGCKG	2 cut(s)	1298, 1511
MspI	CCGG	8 cut(s)	89, 137, 182, 236, 447, 588, 652, 1306
MspR9I	CCNGG	8 cut(s)	377, 512, 589, 653, 690, 848, 1037, 1306
Mva1269I	GAATGC	1 cut(s)	637
MvaI	CCWGG	5 cut(s)	377, 512, 690, 848, 1037
MvnI	CGCG	2 cut(s)	738, 1127
NaeI	GCCGGC	1 cut(s)	90
NciI	CCSGG	3 cut(s)	589, 653, 1306
NdeII	GATC	9 cut(s)	130, 207, 304, 381, 418, 490, 744, 766, 1276
NgoMIV	GCCGGC	1 cut(s)	88
NheI	GCTAGC	1 cut(s)	833
NlaIII	CATG	2 cut(s)	775, 1429
NlaIV	GGNNCC	6 cut(s)	144, 445, 656, 657, 1147, 1303
NmeAIII	GCCGAG	1 cut(s)	85
NmuCI	GTSAC	3 cut(s)	259, 883, 1308
NspI	RCATGY	1 cut(s)	775
PciSI	GCTCTTC	1 cut(s)	939
PcsI	WCGNNNNNNNCGW	1 cut(s)	281
PctI	GAATGC	1 cut(s)	637
PdiI	GCCGGC	1 cut(s)	90
PdmI	GAANNNNTTC	1 cut(s)	221
PfeI	GAWTC	3 cut(s)	310, 397, 800
PkrI	GCNGC	7 cut(s)	19, 22, 25, 87, 147, 180, 199
PleI	GAGTC	4 cut(s)	70, 236, 397, 890
PpsI	GAGTC	4 cut(s)	70, 236, 397, 890
Psp124BI	GAGCTC	1 cut(s)	189
Psp6I	CCWGG	5 cut(s)	375, 510, 688, 846, 1035
PspFI	CCCAGC	3 cut(s)	111, 724, 1361
PspGI	CCWGG	5 cut(s)	375, 510, 688, 846, 1035
PspN4I	GGNNCC	6 cut(s)	144, 445, 656, 657, 1147, 1303
PspOMI	GGGCCC	1 cut(s)	654
PspPI	GGNCC	5 cut(s)	114, 433, 654, 655, 1301
PsrI	GAACNNNNNNTAC	2 cut(s)	676, 708
PstI	CTGCAG	1 cut(s)	601
PstNI	CAGNNNCTG	1 cut(s)	1325
PsuI	RGATCY	3 cut(s)	304, 418, 744
PvuII	CAGCTG	2 cut(s)	1298, 1511
RsaI	GTAC	7 cut(s)	281, 694, 974, 983, 1227, 1340, 1461
RsaNI	GTAC	7 cut(s)	280, 693, 973, 982, 1226, 1339, 1460
SacI	GAGCTC	1 cut(s)	189
SapI	GCTCTTC	1 cut(s)	939
SaqAI	TTAA	9 cut(s)	806, 873, 966, 1188, 1199, 1257, 1392, 1470, 1503
SatI	GCNGC	7 cut(s)	18, 21, 24, 86, 146, 179, 198
Sau3AI	GATC	9 cut(s)	130, 207, 304, 381, 418, 490, 744, 766, 1276
Sau96I	GGNCC	5 cut(s)	114, 433, 654, 655, 1301
SchI	GAGTC	4 cut(s)	71, 236, 397, 891
ScrFI	CCNGG	8 cut(s)	377, 512, 589, 653, 690, 848, 1037, 1306
SduI	GDGCHC	5 cut(s)	189, 471, 658, 1150, 1501
SfaNI	GCATC	1 cut(s)	465
SfcI	CTRYAG	2 cut(s)	597, 1520
SgrAI	CRCCGGYG	1 cut(s)	88
SinI	GGWCC	1 cut(s)	1301
SmlI	CTYRAG	2 cut(s)	669, 898
SmoI	CTYRAG	2 cut(s)	669, 898
Sse9I	AATT	8 cut(s)	889, 1026, 1173, 1258, 1270, 1350, 1393, 1434
SspI	AATATT	1 cut(s)	1292
SspMI	CTAG	4 cut(s)	291, 534, 834, 1049
SstI	GAGCTC	1 cut(s)	189
StyD4I	CCNGG	8 cut(s)	375, 510, 587, 651, 688, 846, 1035, 1304
TaaI	ACNGT	2 cut(s)	986, 1521
TaiI	ACGT	2 cut(s)	287, 916
TaqI	TCGA	3 cut(s)	45, 189, 228
TaqII	GACCGA	1 cut(s)	26
TasI	AATT	8 cut(s)	889, 1026, 1173, 1258, 1270, 1350, 1393, 1434
TatI	WGTACW	3 cut(s)	972, 981, 1225
TauI	GCSGC	6 cut(s)	20, 23, 26, 88, 148, 200
TfiI	GAWTC	3 cut(s)	310, 397, 800
Tru1I	TTAA	9 cut(s)	806, 873, 966, 1188, 1199, 1257, 1392, 1470, 1503
Tru9I	TTAA	9 cut(s)	806, 873, 966, 1188, 1199, 1257, 1392, 1470, 1503
TscAI	CASTG	4 cut(s)	79, 207, 666, 1162
TseFI	GTSAC	3 cut(s)	259, 883, 1308
TseI	GCWGC	1 cut(s)	178
Tsp45I	GTSAC	3 cut(s)	259, 883, 1308
TspDTI	ATGAA	6 cut(s)	42, 725, 731, 891, 1008, 1422
TspGWI	ACGGA	1 cut(s)	153
TspRI	CASTG	4 cut(s)	79, 207, 666, 1162
VpaK11BI	GGWCC	1 cut(s)	1301
XapI	RAATTY	2 cut(s)	889, 1026
XceI	RCATGY	1 cut(s)	775
XcmI	CCANNNNNNNNNTGG	1 cut(s)	538
XmiI	GTMKAC	1 cut(s)	167
XmnI	GAANNNNTTC	1 cut(s)	221
XspI	CTAG	4 cut(s)	291, 534, 834, 1049

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.