DEAD-box ATP-dependent RNA helicase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1190 |
| Acc36I | ACCTGC | 2 cut(s) | 1012, 1119 |
| AccB1I | GGYRCC | 3 cut(s) | 47, 424, 914 |
| AccII | CGCG | 1 cut(s) | 507 |
| AciI | CCGC | 2 cut(s) | 194, 505 |
| AclWI | GGATC | 2 cut(s) | 269, 1064 |
| AcsI | RAATTY | 4 cut(s) | 26, 658, 795, 1058 |
| AcuI | CTGAAG | 1 cut(s) | 369 |
| AfaI | GTAC | 6 cut(s) | 463, 743, 752, 996, 1109, 1230 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 511, 1021 |
| AflII | CTTAAG | 1 cut(s) | 574 |
| AgsI | TTSAA | 2 cut(s) | 142, 911 |
| AjnI | CCWGG | 4 cut(s) | 159, 457, 615, 804 |
| AluBI | AGCT | 6 cut(s) | 148, 290, 493, 635, 718, 1154 |
| AluI | AGCT | 6 cut(s) | 148, 290, 493, 635, 718, 1154 |
| Alw26I | GTCTC | 2 cut(s) | 670, 930 |
| AlwI | GGATC | 2 cut(s) | 269, 1064 |
| Ama87I | CYCGRG | 1 cut(s) | 294 |
| AoxI | GGCC | 1 cut(s) | 216 |
| ApoI | RAATTY | 4 cut(s) | 26, 658, 795, 1058 |
| AspLEI | GCGC | 1 cut(s) | 857 |
| AspS9I | GGNCC | 2 cut(s) | 217, 514 |
| AsuC2I | CCSGG | 3 cut(s) | 232, 422, 1075 |
| AsuHPI | GGTGA | 1 cut(s) | 1056 |
| AvaI | CYCGRG | 1 cut(s) | 294 |
| AvaII | GGWCC | 1 cut(s) | 514 |
| BaeGI | GKGCMC | 1 cut(s) | 919 |
| BanI | GGYRCC | 3 cut(s) | 47, 424, 914 |
| BanII | GRGCYC | 1 cut(s) | 301 |
| BbsI | GAAGAC | 2 cut(s) | 242, 936 |
| BbvCI | CCTCAGC | 1 cut(s) | 549 |
| BccI | CCATC | 6 cut(s) | 127, 337, 468, 548, 881, 956 |
| BceAI | ACGGC | 3 cut(s) | 252, 362, 450 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 154, 188 |
| BciT130I | CCWGG | 4 cut(s) | 161, 459, 617, 806 |
| BclI | TGATCA | 1 cut(s) | 535 |
| BcnI | CCSGG | 3 cut(s) | 232, 422, 1075 |
| BcoDI | GTCTC | 2 cut(s) | 670, 930 |
| BfmI | CTRYAG | 1 cut(s) | 1086 |
| BfrI | CTTAAG | 1 cut(s) | 574 |
| BfuAI | ACCTGC | 2 cut(s) | 1012, 1119 |
| BglII | AGATCT | 1 cut(s) | 202 |
| BisI | GCNGC | 1 cut(s) | 505 |
| BlpI | GCTNAGC | 1 cut(s) | 263 |
| BlsI | GCNGC | 1 cut(s) | 506 |
| Bme1390I | CCNGG | 7 cut(s) | 161, 232, 422, 459, 617, 806, 1075 |
| Bme18I | GGWCC | 1 cut(s) | 514 |
| BmeT110I | CYCGRG | 1 cut(s) | 294 |
| BmgT120I | GGNCC | 2 cut(s) | 217, 514 |
| BmiI | GGNNCC | 4 cut(s) | 49, 229, 426, 916 |
| BmrFI | CCNGG | 7 cut(s) | 161, 232, 422, 459, 617, 806, 1075 |
| BmrI | ACTGGG | 1 cut(s) | 366 |
| BmsI | GCATC | 1 cut(s) | 315 |
| BmuI | ACTGGG | 1 cut(s) | 366 |
| BpiI | GAAGAC | 2 cut(s) | 242, 936 |
| Bpu10I | CCTNAGC | 2 cut(s) | 213, 549 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 263 |
| BpuEI | CTTGAG | 1 cut(s) | 652 |
| BpuMI | CCSGG | 3 cut(s) | 232, 422, 1075 |
| BsaJI | CCNNGG | 3 cut(s) | 293, 805, 1073 |
| BsaWI | WCCGGW | 1 cut(s) | 1051 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 511, 1021 |
| Bse1I | ACTGG | 4 cut(s) | 51, 361, 428, 1232 |
| BseBI | CCWGG | 4 cut(s) | 161, 459, 617, 806 |
| BseDI | CCNNGG | 3 cut(s) | 293, 805, 1073 |
| BseGI | GGATG | 2 cut(s) | 483, 559 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 511, 1021 |
| BseMII | CTCAG | 5 cut(s) | 163, 227, 277, 540, 758 |
| BseNI | ACTGG | 4 cut(s) | 51, 361, 428, 1232 |
| BseRI | GAGGAG | 2 cut(s) | 180, 282 |
| BseSI | GKGCMC | 1 cut(s) | 919 |
| BseYI | CCCAGC | 1 cut(s) | 493 |
| Bsh1236I | CGCG | 1 cut(s) | 507 |
| BshFI | GGCC | 1 cut(s) | 218 |
| BshNI | GGYRCC | 3 cut(s) | 47, 424, 914 |
| BsiHKCI | CYCGRG | 1 cut(s) | 294 |
| BsiSI | CCGG | 4 cut(s) | 231, 421, 1052, 1075 |
| BslFI | GGGAC | 3 cut(s) | 297, 365, 602 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 511, 1021 |
| BsmAI | GTCTC | 2 cut(s) | 670, 930 |
| BsmFI | GGGAC | 3 cut(s) | 297, 365, 602 |
| BsmI | GAATGC | 1 cut(s) | 406 |
| BsnI | GGCC | 1 cut(s) | 218 |
| BsoBI | CYCGRG | 1 cut(s) | 294 |
| Bsp1286I | GDGCHC | 2 cut(s) | 301, 919 |
| Bsp143I | GATC | 6 cut(s) | 165, 202, 274, 535, 1045, 1069 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 263 |
| BspACI | CCGC | 2 cut(s) | 194, 505 |
| BspANI | GGCC | 1 cut(s) | 218 |
| BspCNI | CTCAG | 5 cut(s) | 162, 226, 276, 541, 759 |
| BspFNI | CGCG | 1 cut(s) | 507 |
| BspLI | GGNNCC | 4 cut(s) | 49, 229, 426, 916 |
| BspMI | ACCTGC | 2 cut(s) | 1012, 1119 |
| BspPI | GGATC | 2 cut(s) | 269, 1064 |
| BspQI | GCTCTTC | 1 cut(s) | 708 |
| BspT107I | GGYRCC | 3 cut(s) | 47, 424, 914 |
| BspTI | CTTAAG | 1 cut(s) | 574 |
| BsrI | ACTGG | 4 cut(s) | 51, 361, 428, 1232 |
| BssECI | CCNNGG | 3 cut(s) | 293, 805, 1073 |
| BssMI | GATC | 6 cut(s) | 165, 202, 274, 535, 1045, 1069 |
| Bst2UI | CCWGG | 4 cut(s) | 161, 459, 617, 806 |
| Bst4CI | ACNGT | 3 cut(s) | 96, 755, 1031 |
| Bst6I | CTCTTC | 1 cut(s) | 708 |
| BstAFI | CTTAAG | 1 cut(s) | 574 |
| BstC8I | GCNNGC | 1 cut(s) | 546 |
| BstDEI | CTNAG | 5 cut(s) | 149, 213, 263, 549, 767 |
| BstF5I | GGATG | 2 cut(s) | 483, 559 |
| BstFNI | CGCG | 1 cut(s) | 507 |
| BstHHI | GCGC | 1 cut(s) | 857 |
| BstKTI | GATC | 6 cut(s) | 168, 205, 277, 538, 1048, 1072 |
| BstMAI | GTCTC | 2 cut(s) | 670, 930 |
| BstMBI | GATC | 6 cut(s) | 165, 202, 274, 535, 1045, 1069 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 65, 259, 296, 902 |
| BstNI | CCWGG | 4 cut(s) | 161, 459, 617, 806 |
| BstNSI | RCATGY | 1 cut(s) | 544 |
| BstSCI | CCNGG | 7 cut(s) | 159, 230, 420, 457, 615, 804, 1073 |
| BstSFI | CTRYAG | 1 cut(s) | 1086 |
| BstSLI | GKGCMC | 1 cut(s) | 919 |
| BstUI | CGCG | 1 cut(s) | 507 |
| BstV2I | GAAGAC | 2 cut(s) | 242, 936 |
| BstX2I | RGATCY | 1 cut(s) | 202 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 325 |
| BstYI | RGATCY | 1 cut(s) | 202 |
| BsuRI | GGCC | 1 cut(s) | 218 |
| BtgZI | GCGATG | 1 cut(s) | 1188 |
| BtsCI | GGATG | 2 cut(s) | 483, 559 |
| BtsIMutI | CAGTG | 2 cut(s) | 354, 1239 |
| BveI | ACCTGC | 2 cut(s) | 1012, 1119 |
| Cac8I | GCNNGC | 1 cut(s) | 546 |
| CfoI | GCGC | 1 cut(s) | 857 |
| Cfr13I | GGNCC | 2 cut(s) | 217, 514 |
| Csp6I | GTAC | 6 cut(s) | 462, 742, 751, 995, 1108, 1229 |
| CviAII | CATG | 4 cut(s) | 23, 40, 541, 1195 |
| CviQI | GTAC | 6 cut(s) | 462, 742, 751, 995, 1108, 1229 |
| DdeI | CTNAG | 5 cut(s) | 149, 213, 263, 549, 767 |
| DpnI | GATC | 6 cut(s) | 167, 204, 276, 537, 1047, 1071 |
| DpnII | GATC | 6 cut(s) | 165, 202, 274, 535, 1045, 1069 |
| DraI | TTTAAA | 1 cut(s) | 958 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1190 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1190 |
| Eam1104I | CTCTTC | 1 cut(s) | 708 |
| EarI | CTCTTC | 1 cut(s) | 708 |
| Eco24I | GRGCYC | 1 cut(s) | 301 |
| Eco47I | GGWCC | 1 cut(s) | 514 |
| Eco57I | CTGAAG | 1 cut(s) | 369 |
| Eco88I | CYCGRG | 1 cut(s) | 294 |
| EcoO109I | RGGNCCY | 1 cut(s) | 514 |
| EcoRII | CCWGG | 4 cut(s) | 159, 457, 615, 804 |
| EcoT38I | GRGCYC | 1 cut(s) | 301 |
| FaeI | CATG | 4 cut(s) | 26, 43, 544, 1198 |
| FaqI | GGGAC | 3 cut(s) | 297, 365, 602 |
| FatI | CATG | 4 cut(s) | 22, 39, 540, 1194 |
| FbaI | TGATCA | 1 cut(s) | 535 |
| Fnu4HI | GCNGC | 1 cut(s) | 505 |
| FokI | GGATG | 2 cut(s) | 490, 566 |
| FriOI | GRGCYC | 1 cut(s) | 301 |
| Fsp4HI | GCNGC | 1 cut(s) | 505 |
| GlaI | GCGC | 1 cut(s) | 856 |
| GluI | GCNGC | 1 cut(s) | 505 |
| GsaI | CCCAGC | 1 cut(s) | 497 |
| HaeIII | GGCC | 1 cut(s) | 218 |
| HapII | CCGG | 4 cut(s) | 231, 421, 1052, 1075 |
| HhaI | GCGC | 1 cut(s) | 857 |
| Hin1II | CATG | 4 cut(s) | 26, 43, 544, 1198 |
| Hin6I | GCGC | 1 cut(s) | 855 |
| HinP1I | GCGC | 1 cut(s) | 855 |
| HincII | GTYRAC | 1 cut(s) | 1027 |
| HindII | GTYRAC | 1 cut(s) | 1027 |
| HinfI | GANTC | 3 cut(s) | 187, 569, 651 |
| HpaI | GTTAAC | 1 cut(s) | 1027 |
| HpaII | CCGG | 4 cut(s) | 231, 421, 1052, 1075 |
| HphI | GGTGA | 1 cut(s) | 1056 |
| Hpy166II | GTNNAC | 5 cut(s) | 83, 113, 751, 1027, 1108 |
| Hpy188I | TCNGA | 5 cut(s) | 339, 370, 388, 843, 883 |
| Hpy188III | TCNNGA | 6 cut(s) | 142, 278, 469, 706, 758, 787 |
| Hpy8I | GTNNAC | 5 cut(s) | 83, 113, 751, 1027, 1108 |
| HpyAV | CCTTC | 3 cut(s) | 393, 417, 505 |
| HpyCH4III | ACNGT | 3 cut(s) | 96, 755, 1031 |
| HpyCH4IV | ACGT | 1 cut(s) | 1164 |
| HpyCH4V | TGCA | 6 cut(s) | 68, 91, 306, 404, 1114, 1250 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 65, 259, 296, 902 |
| HpyF3I | CTNAG | 5 cut(s) | 149, 213, 263, 549, 767 |
| HpySE526I | ACGT | 1 cut(s) | 1164 |
| Hsp92II | CATG | 4 cut(s) | 26, 43, 544, 1198 |
| HspAI | GCGC | 1 cut(s) | 855 |
| Ksp22I | TGATCA | 1 cut(s) | 535 |
| KspAI | GTTAAC | 1 cut(s) | 1027 |
| Kzo9I | GATC | 6 cut(s) | 165, 202, 274, 535, 1045, 1069 |
| LguI | GCTCTTC | 1 cut(s) | 708 |
| LmnI | GCTCC | 2 cut(s) | 295, 1151 |
| LweI | GCATC | 1 cut(s) | 315 |
| MaeII | ACGT | 1 cut(s) | 1164 |
| MaeIII | GTNAC | 7 cut(s) | 53, 430, 652, 686, 898, 1077, 1237 |
| MalI | GATC | 6 cut(s) | 167, 204, 276, 537, 1047, 1071 |
| MboI | GATC | 6 cut(s) | 165, 202, 274, 535, 1045, 1069 |
| MboII | GAAGA | 5 cut(s) | 247, 352, 725, 941, 1040 |
| MflI | RGATCY | 1 cut(s) | 202 |
| MhlI | GDGCHC | 2 cut(s) | 301, 919 |
| MlyI | GAGTC | 2 cut(s) | 181, 660 |
| MseI | TTAA | 9 cut(s) | 30, 575, 642, 735, 957, 968, 1026, 1038, 1161 |
| MspCI | CTTAAG | 1 cut(s) | 574 |
| MspI | CCGG | 4 cut(s) | 231, 421, 1052, 1075 |
| MspR9I | CCNGG | 7 cut(s) | 161, 232, 422, 459, 617, 806, 1075 |
| Mva1269I | GAATGC | 1 cut(s) | 406 |
| MvaI | CCWGG | 4 cut(s) | 161, 459, 617, 806 |
| MvnI | CGCG | 1 cut(s) | 507 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 65, 259, 296, 902 |
| NciI | CCSGG | 3 cut(s) | 232, 422, 1075 |
| NdeII | GATC | 6 cut(s) | 165, 202, 274, 535, 1045, 1069 |
| NlaIII | CATG | 4 cut(s) | 26, 43, 544, 1198 |
| NlaIV | GGNNCC | 4 cut(s) | 49, 229, 426, 916 |
| NmuCI | GTSAC | 2 cut(s) | 652, 1077 |
| NspI | RCATGY | 1 cut(s) | 544 |
| PciSI | GCTCTTC | 1 cut(s) | 708 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1170 |
| PctI | GAATGC | 1 cut(s) | 406 |
| PfeI | GAWTC | 1 cut(s) | 569 |
| PfoI | TCCNGGA | 1 cut(s) | 230 |
| PkrI | GCNGC | 1 cut(s) | 506 |
| PleI | GAGTC | 2 cut(s) | 181, 659 |
| PpsI | GAGTC | 2 cut(s) | 181, 659 |
| PpuMI | RGGWCCY | 1 cut(s) | 514 |
| Psp5II | RGGWCCY | 1 cut(s) | 514 |
| Psp6I | CCWGG | 4 cut(s) | 159, 457, 615, 804 |
| PspFI | CCCAGC | 1 cut(s) | 493 |
| PspGI | CCWGG | 4 cut(s) | 159, 457, 615, 804 |
| PspN4I | GGNNCC | 4 cut(s) | 49, 229, 426, 916 |
| PspPI | GGNCC | 2 cut(s) | 217, 514 |
| PspPPI | RGGWCCY | 1 cut(s) | 514 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 445, 477 |
| PsuI | RGATCY | 1 cut(s) | 202 |
| RsaI | GTAC | 6 cut(s) | 463, 743, 752, 996, 1109, 1230 |
| RsaNI | GTAC | 6 cut(s) | 462, 742, 751, 995, 1108, 1229 |
| SapI | GCTCTTC | 1 cut(s) | 708 |
| SaqAI | TTAA | 9 cut(s) | 30, 575, 642, 735, 957, 968, 1026, 1038, 1161 |
| SatI | GCNGC | 1 cut(s) | 505 |
| Sau3AI | GATC | 6 cut(s) | 165, 202, 274, 535, 1045, 1069 |
| Sau96I | GGNCC | 2 cut(s) | 217, 514 |
| SchI | GAGTC | 2 cut(s) | 181, 660 |
| ScrFI | CCNGG | 7 cut(s) | 161, 232, 422, 459, 617, 806, 1075 |
| SduI | GDGCHC | 2 cut(s) | 301, 919 |
| SfaNI | GCATC | 1 cut(s) | 315 |
| SfcI | CTRYAG | 1 cut(s) | 1086 |
| SinI | GGWCC | 1 cut(s) | 514 |
| SmlI | CTYRAG | 2 cut(s) | 574, 667 |
| SmoI | CTYRAG | 2 cut(s) | 574, 667 |
| SsiI | CCGC | 2 cut(s) | 194, 505 |
| StyD4I | CCNGG | 7 cut(s) | 159, 230, 420, 457, 615, 804, 1073 |
| TaaI | ACNGT | 3 cut(s) | 96, 755, 1031 |
| TaiI | ACGT | 1 cut(s) | 1167 |
| TaqI | TCGA | 2 cut(s) | 482, 525 |
| TatI | WGTACW | 3 cut(s) | 741, 750, 994 |
| TauI | GCSGC | 1 cut(s) | 507 |
| TfiI | GAWTC | 1 cut(s) | 569 |
| Tru1I | TTAA | 9 cut(s) | 30, 575, 642, 735, 957, 968, 1026, 1038, 1161 |
| Tru9I | TTAA | 9 cut(s) | 30, 575, 642, 735, 957, 968, 1026, 1038, 1161 |
| TscAI | CASTG | 2 cut(s) | 361, 1239 |
| TseFI | GTSAC | 2 cut(s) | 652, 1077 |
| Tsp45I | GTSAC | 2 cut(s) | 652, 1077 |
| TspDTI | ATGAA | 5 cut(s) | 17, 39, 500, 660, 777 |
| TspRI | CASTG | 2 cut(s) | 361, 1239 |
| Vha464I | CTTAAG | 1 cut(s) | 574 |
| VpaK11BI | GGWCC | 1 cut(s) | 514 |
| XapI | RAATTY | 4 cut(s) | 26, 658, 795, 1058 |
| XceI | RCATGY | 1 cut(s) | 544 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 41, 130, 322 |