Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0001022

Physical Location & Seq

Genomic Coordinates Forward (+)

32890431 .. 32893600

Gene Structure 3170 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024187

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1155 bp

ATGGCCGAGAAAAATCAAAACAACGCATCAACTTGCCAAGCTGAGCTCCAAATCGCCGGCAAGAACAAATTCCTGGACGAACCTGAAGACTCATATATCAGCGCTGTTACAACCGGCAACACGCCGTACACGTCGGCGAGTACTTTCGAGGATCTGCATTTATCAGAGGAGTTGTTGAAGGGTTTGTATGTGGAGATGGGGTTCAAGAAGCCGAGTAAAATCCAGGCAATTACATTGCCTATGATTTTGACGACTCCACACAAAGACTTGGTTGCTCAGGCTCACAATGGCTCAGGGAAGACGACTTGTTTCGTGCTCGGGATGCTCAGCCGTGTCGATCCGAATGTGAAAGCTCCTCAGGCTCTCTGCATTTGTCCCACCAGAGAATTGGCACTTCAGAATGCAGAGGTTATTCGTAAGATGGGGAAGTACACAGGGATAAATGTAGAGTGTGCTGTCCCAATGGAGAAGGAAAAATCTACACCAGTGAAGTACCGGCCTCTGGTATCAGCACAAATTGTGATTGGAACGCCTGGTACAGTTAAGAACTTGATGTCATACAAGAAGCTGGGTGTAAGCGGTGTGAAGATTCTTGTTTTCGATGAAGCTGATCACATGCTGGCTGAGGATGGATTTAAAGATGAATCTTTAAGGGTAAAAAAGGAGATAGAGAAATTTGACACTCACTGCCAGGTGCTCCTGTTTTCTGCTACATTCGATGAAACAGTCAGAAATTTAATCTCAAGGGTGGTGAAGGACAAGAATGAACTATTTGTTAAGAAAGAAGAGCTATCTTTGGCGGCTGTGAAGCAGTACAAGGTCTACTGCCCTGACGAACTAACCAAAATTGATGTGATCAAAACCAAGATATTCGACCTAGGGGAGAACATTGGACAGCGAATCATTTTTGTAGGGTCAAGAGCTAGTGCAAGAATGTTGCATAAACAACTTCATGAGGATGGTTATGCAGTTACAAATGTTCATGGTGCCCTCACTACTGAACATAGAGACAAGACGATTAAAGAATTCAGAGAGGGTTACACCCAAGTTCTTATTGCAACTGACATGCTTGCGCGAGGCTTTGACAGCCAGCAGGTTAACATAAGTGAAGAAGCTTTTGAAGATGCTCTCAAGTTAGCGGGCTTGAAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005730 GO:0005737 GO:0005886 GO:0006139 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0008026 GO:0008104 GO:0008150 GO:0008152 GO:0008186 GO:0009266 GO:0009408 GO:0009409 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0010501 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0016973 GO:0017111 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033993 GO:0034613 GO:0034641 GO:0042221 GO:0042623 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070035 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0090304 GO:0097305 GO:0140098 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

385

Amino Acids

42.75

Weight (kDa)

6.54

Isoelectric Point (pI)

28.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	73 - 245	8.7e-37	DEAD/DEAH box helicase
ResIII	PF04851	85 - 240	1.6e-08	Type III restriction enzyme, res subunit
Helicase_C	PF00271	289 - 367	2.7e-13	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001022)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53110
fragaria_vesca	FvH4_6g17230 FvH4_6g17230 FvH4_6g17230 FvH4_6g17280 FvH4_6g17280
malus_domestica	MD12G1102600.v1.1 MD14G1096800.v1.1
prunus_persica	Prupe.3G009100_v2.0.a1 Prupe.7G122600_v2.0.a1
pyrus_communis	pycom03g08760 pycom12g10060 pycom14g09450
rosa_chinensis	RchiOBHm_Chr3g0471311 RchiOBHm_Chr3g0471321 RchiOBHm_Chr3g0471361 RchiOBHm_Chr3g0471391
rosa_laevigata	RLG00000024181 RLG00000024187 RLG00000024188
rosa_multiflora	Rmu_sc0006582.1_g000015 Rmu_sc0006582.1_g000018 Rmu_sc0009082.1_g000003 Rmu_sc0010513.1_g000003 Rmu_sc0015755.1_g000002 Rmu_sc0030425.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409980 Rroxscaffold_6G00410000 Rroxscaffold_6G00410060 Rroxscaffold_6G00410080
rosa_rugosa	Rorug03G0117100 Rorug03G0117100 Rorug03G0117100 Rorug03G0117400 Rorug03G0117500 Rorug03G0117500
rosa_samantha	Rh3AG166500 Rh3AG166600 Rh3AG166700 Rh3AG167100 Rh3BG191900 Rh3BG192000 Rh3BG192100 Rh3BG192400 Rh3BG192500 Rh3BG192800 Rh3CG182200 Rh3CG182300 Rh3CG182400 Rh3CG182700 Rh3CG182800 Rh3CG183200 Rh3DG182700 Rh3DG183100 Rh3DG183200 Rh3DG183700 Rh3DG183800
rosa_wichuraiana	Rw3G015670 Rw3G015680 Rw3G015730 Rw3G015760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1084
AccB1I	GGYRCC	1 cut(s)	986
AccI	GTMKAC	1 cut(s)	822
AccII	CGCG	1 cut(s)	1075
AciI	CCGC	3 cut(s)	579, 800, 1139
AclWI	GGATC	2 cut(s)	159, 332
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	4 cut(s)	68, 674, 733, 1025
AcuI	CTGAAG	2 cut(s)	105, 380
AfaI	GTAC	6 cut(s)	128, 142, 431, 494, 538, 815
AfeI	AGCGCT	1 cut(s)	103
AfiI	CCNNNNNNNGG	1 cut(s)	502
AflIII	ACRYGT	1 cut(s)	129
AgsI	TTSAA	4 cut(s)	178, 205, 1121, 1147
AjiI	CACGTC	1 cut(s)	132
AjnI	CCWGG	4 cut(s)	72, 222, 532, 690
AloI	GAACNNNNNNTCC	2 cut(s)	185, 217
AluBI	AGCT	8 cut(s)	41, 46, 353, 568, 608, 790, 923, 1115
AluI	AGCT	8 cut(s)	41, 46, 353, 568, 608, 790, 923, 1115
Alw21I	GWGCWC	3 cut(s)	48, 318, 699
Alw26I	GTCTC	1 cut(s)	1002
AlwI	GGATC	2 cut(s)	159, 332
Ama87I	CYCGRG	1 cut(s)	317
Aor51HI	AGCGCT	1 cut(s)	103
AoxI	GGCC	2 cut(s)	3, 497
ApoI	RAATTY	4 cut(s)	68, 674, 733, 1025
Asp700I	GAANNNNTTC	1 cut(s)	68
AspA2I	CCTAGG	1 cut(s)	877
AspLEI	GCGC	2 cut(s)	104, 1075
AsuHPI	GGTGA	1 cut(s)	763
AvaI	CYCGRG	1 cut(s)	317
AvrII	CCTAGG	1 cut(s)	877
AxyI	CCTNAGG	1 cut(s)	357
BaeGI	GKGCMC	1 cut(s)	991
BanI	GGYRCC	1 cut(s)	986
BanII	GRGCYC	1 cut(s)	48
BbsI	GAAGAC	2 cut(s)	93, 305
Bbv12I	GWGCWC	3 cut(s)	48, 318, 699
BbvCI	CCTCAGC	1 cut(s)	624
BccI	CCATC	4 cut(s)	190, 415, 623, 953
BceAI	ACGGC	2 cut(s)	109, 315
BciT130I	CCWGG	4 cut(s)	74, 224, 534, 692
BclI	TGATCA	2 cut(s)	610, 855
BcoDI	GTCTC	1 cut(s)	1002
BfaI	CTAG	2 cut(s)	878, 924
BfoI	RGCGCY	1 cut(s)	105
BfuAI	ACCTGC	1 cut(s)	1084
BisI	GCNGC	1 cut(s)	801
BlnI	CCTAGG	1 cut(s)	877
BlpI	GCTNAGC	2 cut(s)	42, 326
BlsI	GCNGC	1 cut(s)	802
BmcAI	AGTACT	1 cut(s)	142
Bme1390I	CCNGG	4 cut(s)	74, 224, 534, 692
BmeT110I	CYCGRG	1 cut(s)	317
BmgBI	CACGTC	1 cut(s)	132
BmiI	GGNNCC	1 cut(s)	988
BmrFI	CCNGG	4 cut(s)	74, 224, 534, 692
BmsI	GCATC	3 cut(s)	35, 312, 1114
BpiI	GAAGAC	2 cut(s)	93, 305
Bpu10I	CCTNAGC	3 cut(s)	276, 292, 624
Bpu1102I	GCTNAGC	2 cut(s)	42, 326
BpuEI	CTTGAG	2 cut(s)	727, 1115
BsaJI	CCNNGG	1 cut(s)	877
BsaXI	ACNNNNNCTCC	2 cut(s)	185, 215
Bsc4I	CCNNNNNNNGG	1 cut(s)	502
Bse118I	RCCGGY	3 cut(s)	56, 113, 495
Bse1I	ACTGG	1 cut(s)	485
Bse21I	CCTNAGG	1 cut(s)	357
Bse3DI	GCAATG	1 cut(s)	233
BseBI	CCWGG	4 cut(s)	74, 224, 534, 692
BseDI	CCNNGG	1 cut(s)	877
BseGI	GGATG	3 cut(s)	327, 634, 964
BseLI	CCNNNNNNNGG	1 cut(s)	502
BseMI	GCAATG	1 cut(s)	233
BseMII	CTCAG	6 cut(s)	33, 290, 306, 340, 371, 615
BseNI	ACTGG	1 cut(s)	485
BseRI	GAGGAG	2 cut(s)	182, 345
BseSI	GKGCMC	1 cut(s)	991
BseYI	CCCAGC	1 cut(s)	568
Bsh1236I	CGCG	1 cut(s)	1075
BshFI	GGCC	2 cut(s)	5, 499
BshNI	GGYRCC	1 cut(s)	986
BsiHKAI	GWGCWC	3 cut(s)	48, 318, 699
BsiHKCI	CYCGRG	1 cut(s)	317
BsiSI	CCGG	3 cut(s)	57, 114, 496
BslFI	GGGAC	2 cut(s)	360, 443
BslI	CCNNNNNNNGG	1 cut(s)	502
BsmAI	GTCTC	1 cut(s)	1002
BsmFI	GGGAC	2 cut(s)	360, 443
BsmI	GAATGC	1 cut(s)	406
BsnI	GGCC	2 cut(s)	5, 499
BsoBI	CYCGRG	1 cut(s)	317
Bsp1286I	GDGCHC	4 cut(s)	48, 318, 699, 991
Bsp143I	GATC	4 cut(s)	151, 337, 610, 855
Bsp1720I	GCTNAGC	2 cut(s)	42, 326
BspACI	CCGC	3 cut(s)	579, 800, 1139
BspANI	GGCC	2 cut(s)	5, 499
BspCNI	CTCAG	6 cut(s)	34, 289, 305, 339, 370, 616
BspFNI	CGCG	1 cut(s)	1075
BspHI	TCATGA	1 cut(s)	952
BspLI	GGNNCC	1 cut(s)	988
BspMI	ACCTGC	1 cut(s)	1084
BspPI	GGATC	2 cut(s)	159, 332
BspQI	GCTCTTC	1 cut(s)	780
BspT107I	GGYRCC	1 cut(s)	986
BsrDI	GCAATG	1 cut(s)	233
BsrFI	RCCGGY	3 cut(s)	56, 113, 495
BsrI	ACTGG	1 cut(s)	485
BssAI	RCCGGY	3 cut(s)	56, 113, 495
BssECI	CCNNGG	1 cut(s)	877
BssMI	GATC	4 cut(s)	151, 337, 610, 855
BssT1I	CCWWGG	1 cut(s)	877
Bst2UI	CCWGG	4 cut(s)	74, 224, 534, 692
Bst4CI	ACNGT	2 cut(s)	541, 727
Bst6I	CTCTTC	1 cut(s)	780
BstC8I	GCNNGC	5 cut(s)	58, 621, 1071, 1091, 1141
BstDEI	CTNAG	6 cut(s)	42, 276, 292, 326, 357, 624
BstF5I	GGATG	3 cut(s)	327, 634, 964
BstFNI	CGCG	1 cut(s)	1075
BstH2I	RGCGCY	1 cut(s)	105
BstHHI	GCGC	2 cut(s)	104, 1075
BstKTI	GATC	4 cut(s)	154, 340, 613, 858
BstMAI	GTCTC	1 cut(s)	1002
BstMBI	GATC	4 cut(s)	151, 337, 610, 855
BstMWI	GCNNNNNNNGC	3 cut(s)	322, 359, 1086
BstNI	CCWGG	4 cut(s)	74, 224, 534, 692
BstNSI	RCATGY	2 cut(s)	619, 1069
BstSCI	CCNGG	4 cut(s)	72, 222, 532, 690
BstSLI	GKGCMC	1 cut(s)	991
BstUI	CGCG	1 cut(s)	1075
BstV2I	GAAGAC	2 cut(s)	93, 305
BstX2I	RGATCY	1 cut(s)	151
BstXI	CCANNNNNNTGG	1 cut(s)	388
BstYI	RGATCY	1 cut(s)	151
Bsu36I	CCTNAGG	1 cut(s)	357
BsuRI	GGCC	2 cut(s)	5, 499
BtrI	CACGTC	1 cut(s)	132
BtsCI	GGATG	3 cut(s)	327, 634, 964
BtsI	GCAGTG	1 cut(s)	685
BtsIMutI	CAGTG	2 cut(s)	492, 685
BveI	ACCTGC	1 cut(s)	1084
Cac8I	GCNNGC	5 cut(s)	58, 621, 1071, 1091, 1141
CciI	TCATGA	1 cut(s)	952
CfoI	GCGC	2 cut(s)	104, 1075
Cfr10I	RCCGGY	3 cut(s)	56, 113, 495
Csp6I	GTAC	6 cut(s)	127, 141, 430, 493, 537, 814
CviAII	CATG	4 cut(s)	616, 953, 983, 1066
CviQI	GTAC	6 cut(s)	127, 141, 430, 493, 537, 814
DdeI	CTNAG	6 cut(s)	42, 276, 292, 326, 357, 624
DpnI	GATC	4 cut(s)	153, 339, 612, 857
DpnII	GATC	4 cut(s)	151, 337, 610, 855
DraI	TTTAAA	1 cut(s)	637
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	780
EarI	CTCTTC	1 cut(s)	780
Ecl136II	GAGCTC	1 cut(s)	46
Eco130I	CCWWGG	1 cut(s)	877
Eco24I	GRGCYC	1 cut(s)	48
Eco47III	AGCGCT	1 cut(s)	103
Eco53kI	GAGCTC	1 cut(s)	46
Eco57I	CTGAAG	2 cut(s)	105, 380
Eco81I	CCTNAGG	1 cut(s)	357
Eco88I	CYCGRG	1 cut(s)	317
EcoICRI	GAGCTC	1 cut(s)	46
EcoRI	GAATTC	1 cut(s)	1025
EcoRII	CCWGG	4 cut(s)	72, 222, 532, 690
EcoT14I	CCWWGG	1 cut(s)	877
EcoT38I	GRGCYC	1 cut(s)	48
ErhI	CCWWGG	1 cut(s)	877
FaeI	CATG	4 cut(s)	619, 956, 986, 1069
FaqI	GGGAC	2 cut(s)	360, 443
FatI	CATG	4 cut(s)	615, 952, 982, 1065
FauI	CCCGC	1 cut(s)	1132
FbaI	TGATCA	2 cut(s)	610, 855
FblI	GTMKAC	1 cut(s)	822
Fnu4HI	GCNGC	1 cut(s)	801
FokI	GGATG	3 cut(s)	334, 641, 971
FriOI	GRGCYC	1 cut(s)	48
Fsp4HI	GCNGC	1 cut(s)	801
FspBI	CTAG	2 cut(s)	878, 924
GlaI	GCGC	2 cut(s)	103, 1074
GluI	GCNGC	1 cut(s)	801
GsaI	CCCAGC	1 cut(s)	572
HaeII	RGCGCY	1 cut(s)	105
HaeIII	GGCC	2 cut(s)	5, 499
HapII	CCGG	3 cut(s)	57, 114, 496
HhaI	GCGC	2 cut(s)	104, 1075
Hin1II	CATG	4 cut(s)	619, 956, 986, 1069
Hin6I	GCGC	2 cut(s)	102, 1073
HinP1I	GCGC	2 cut(s)	102, 1073
HincII	GTYRAC	1 cut(s)	1099
HindII	GTYRAC	1 cut(s)	1099
HindIII	AAGCTT	1 cut(s)	1113
HinfI	GANTC	5 cut(s)	89, 253, 589, 644, 900
HpaI	GTTAAC	1 cut(s)	1099
HpaII	CCGG	3 cut(s)	57, 114, 496
HphI	GGTGA	1 cut(s)	763
Hpy166II	GTNNAC	4 cut(s)	129, 432, 823, 1099
Hpy188I	TCNGA	5 cut(s)	166, 342, 399, 731, 1031
Hpy188III	TCNNGA	4 cut(s)	205, 319, 918, 953
Hpy8I	GTNNAC	4 cut(s)	129, 432, 823, 1099
Hpy99I	CGWCG	1 cut(s)	136
HpyAV	CCTTC	4 cut(s)	172, 463, 748, 1141
HpyCH4III	ACNGT	2 cut(s)	541, 727
HpyCH4IV	ACGT	1 cut(s)	131
HpyCH4V	TGCA	7 cut(s)	157, 369, 404, 929, 940, 968, 1058
HpyF10VI	GCNNNNNNNGC	3 cut(s)	322, 359, 1086
HpyF3I	CTNAG	6 cut(s)	42, 276, 292, 326, 357, 624
HpySE526I	ACGT	1 cut(s)	131
Hsp92II	CATG	4 cut(s)	619, 956, 986, 1069
HspAI	GCGC	2 cut(s)	102, 1073
KroI	GCCGGC	1 cut(s)	56
KroNI	GCCGGC	1 cut(s)	58
Ksp22I	TGATCA	2 cut(s)	610, 855
KspAI	GTTAAC	1 cut(s)	1099
Kzo9I	GATC	4 cut(s)	151, 337, 610, 855
LguI	GCTCTTC	1 cut(s)	780
LmnI	GCTCC	3 cut(s)	51, 358, 702
LweI	GCATC	3 cut(s)	35, 312, 1114
MaeI	CTAG	2 cut(s)	878, 924
MaeII	ACGT	1 cut(s)	131
MaeIII	GTNAC	3 cut(s)	106, 970, 1037
MalI	GATC	4 cut(s)	153, 339, 612, 857
MboI	GATC	4 cut(s)	151, 337, 610, 855
MboII	GAAGA	6 cut(s)	98, 310, 598, 797, 1121, 1133
MflI	RGATCY	1 cut(s)	151
MhlI	GDGCHC	4 cut(s)	48, 318, 699, 991
MluCI	AATT	8 cut(s)	68, 228, 386, 516, 674, 733, 846, 1025
MlyI	GAGTC	2 cut(s)	83, 247
MroNI	GCCGGC	1 cut(s)	56
MroXI	GAANNNNTTC	1 cut(s)	68
MseI	TTAA	7 cut(s)	543, 636, 650, 737, 777, 1020, 1098
MslI	CAYNNNNRTG	1 cut(s)	957
MspI	CCGG	3 cut(s)	57, 114, 496
MspR9I	CCNGG	4 cut(s)	74, 224, 534, 692
Mva1269I	GAATGC	1 cut(s)	406
MvaI	CCWGG	4 cut(s)	74, 224, 534, 692
MvnI	CGCG	1 cut(s)	1075
MwoI	GCNNNNNNNGC	3 cut(s)	322, 359, 1086
NaeI	GCCGGC	1 cut(s)	58
NdeII	GATC	4 cut(s)	151, 337, 610, 855
NgoMIV	GCCGGC	1 cut(s)	56
NlaIII	CATG	4 cut(s)	619, 956, 986, 1069
NlaIV	GGNNCC	1 cut(s)	988
NmeAIII	GCCGAG	2 cut(s)	31, 237
NspI	RCATGY	2 cut(s)	619, 1069
PagI	TCATGA	1 cut(s)	952
PciSI	GCTCTTC	1 cut(s)	780
PcsI	WCGNNNNNNNCGW	1 cut(s)	128
PctI	GAATGC	1 cut(s)	406
PdiI	GCCGGC	1 cut(s)	58
PdmI	GAANNNNTTC	1 cut(s)	68
PfeI	GAWTC	3 cut(s)	589, 644, 900
PfoI	TCCNGGA	1 cut(s)	72
PkrI	GCNGC	1 cut(s)	802
PleI	GAGTC	2 cut(s)	83, 247
PpsI	GAGTC	2 cut(s)	83, 247
Psp124BI	GAGCTC	1 cut(s)	48
Psp6I	CCWGG	4 cut(s)	72, 222, 532, 690
PspFI	CCCAGC	1 cut(s)	568
PspGI	CCWGG	4 cut(s)	72, 222, 532, 690
PspN4I	GGNNCC	1 cut(s)	988
PsrI	GAACNNNNNNTAC	2 cut(s)	520, 552
PsuI	RGATCY	1 cut(s)	151
RsaI	GTAC	6 cut(s)	128, 142, 431, 494, 538, 815
RsaNI	GTAC	6 cut(s)	127, 141, 430, 493, 537, 814
RseI	CAYNNNNRTG	1 cut(s)	957
SacI	GAGCTC	1 cut(s)	48
SapI	GCTCTTC	1 cut(s)	780
SaqAI	TTAA	7 cut(s)	543, 636, 650, 737, 777, 1020, 1098
SatI	GCNGC	1 cut(s)	801
Sau3AI	GATC	4 cut(s)	151, 337, 610, 855
ScaI	AGTACT	1 cut(s)	142
SchI	GAGTC	2 cut(s)	83, 247
ScrFI	CCNGG	4 cut(s)	74, 224, 534, 692
SduI	GDGCHC	4 cut(s)	48, 318, 699, 991
SfaNI	GCATC	3 cut(s)	35, 312, 1114
SmiMI	CAYNNNNRTG	1 cut(s)	957
SmlI	CTYRAG	2 cut(s)	742, 1130
SmoI	CTYRAG	2 cut(s)	742, 1130
Sse9I	AATT	8 cut(s)	68, 228, 386, 516, 674, 733, 846, 1025
SsiI	CCGC	3 cut(s)	579, 800, 1139
SspMI	CTAG	2 cut(s)	878, 924
SstI	GAGCTC	1 cut(s)	48
StyD4I	CCNGG	4 cut(s)	72, 222, 532, 690
StyI	CCWWGG	1 cut(s)	877
TaaI	ACNGT	2 cut(s)	541, 727
TaiI	ACGT	1 cut(s)	134
TaqI	TCGA	5 cut(s)	147, 336, 600, 717, 873
TasI	AATT	8 cut(s)	68, 228, 386, 516, 674, 733, 846, 1025
TatI	WGTACW	3 cut(s)	140, 429, 813
TauI	GCSGC	1 cut(s)	803
TfiI	GAWTC	3 cut(s)	589, 644, 900
Tru1I	TTAA	7 cut(s)	543, 636, 650, 737, 777, 1020, 1098
Tru9I	TTAA	7 cut(s)	543, 636, 650, 737, 777, 1020, 1098
TscAI	CASTG	2 cut(s)	492, 692
TspDTI	ATGAA	6 cut(s)	618, 657, 735, 780, 941, 971
TspRI	CASTG	2 cut(s)	492, 692
XapI	RAATTY	4 cut(s)	68, 674, 733, 1025
XceI	RCATGY	2 cut(s)	619, 1069
XcmI	CCANNNNNNNNNTGG	1 cut(s)	385
XmaJI	CCTAGG	1 cut(s)	877
XmiI	GTMKAC	1 cut(s)	822
XmnI	GAANNNNTTC	1 cut(s)	68
XspI	CTAG	2 cut(s)	878, 924
ZrmI	AGTACT	1 cut(s)	142

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.