Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001022

Physical Location & Seq

Genomic Coordinates Forward (+)

14542739 .. 14546709

Gene Structure 3971 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G122600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGGCCGAGACTGACGCTTCCGCCGACACAGTCAATGCCACCATCGAAACGGCGGCGCAACCAAACGACAACTCCTCGTCCGATACGGCCACCAGTGCTCCCCCACCGCCGGCGAAACCGGAGTCAAAGCGCTGGGCTGACGAGGAGGACGACCCTCCCGAGGAGCCCGAGAAGAAAAATGACGCGCCGTCTACTTCGGAACCGGAAGTGAACGTTGCCGAATTGAAGATCACCGAGAACAAGTTCCTCGACGACCCCGAAGACTCTAATATTAGCGCCGTTACGACCGGCGACACGCCGTACACGTCGGCGAGTAGCTTCGAGGATCTGAATCTATCGCCAGAGGTGCTGAAGGGCTTGTATGTAGAGATGGGGTTCAAGAAGCCCAGTAAAGTCCAGGCAATCACTTTGCCCATGATTTTAACCCCTCCCCACAAAGATCTTATTGCTCAGGCCCACAATGGTTCGGGCAAAACCACTTGTTTCGTGCTTGGGATGCTCAGCCGGGTCGATCCCAATGTTAAAGCTCCTCAGGCGCTCTGTATATGCCCCACCAGAGAGTTGGCCATTCAGAATATGGAGGTCCTTCAGAAGATGGGGAAGTACACGGGGATAAAAGCAGAGTGTGCTGTCCCAACGGAGAGGACGAGTGCTCCGTCCATTCAATCTCGAGCACCAGTATCAGCACAAATTGTGATCGGAACCCCTGGTACAATTAAGAAATGGATGTCTATCAAGAAGCTGGGCGTAAGCCGTGTGAAGATTCTTGTGTTTGACGAGGCTGATTACATGTTGGCCAAGGATGGCTTTCAGGATGATTCTTTAAGGATAAAGAAGGATATAGAGAGATTTAGCCCTCACTGCCAGGTGCTTTTGTTTTCTGCTACATTTAATGAAATAGTCACAAATTTTGTTTCAAGAGTGATCAAAGGCAGTGGTAATGAACTCTTCGTAAAGAAAGAAGAGCTATCTTTGGAGGGTGTAAAGCAGTACAAGGTGTACTGTCCTGATGAATTGACCAAGATTGAAATCATCAAAAGCAAAATATTTGAACTGGGAGAGAACTTGGGGCAGAGAATTATATTCGTAAGGACAAAAAACAGCGCAAGAATGTTGCATCAAACACTCGTTGAAGATGGTTATGCGGTTACTACTATTCAAGGTGCTCTCACTGTTGAAGATAGAGACAAAATAGTCAAAGAGTTTAAGGATGGATTAACCCAAGTTCTTATCTCAACTGACCTACTCGCTCGAGGCTTTGACCAACAGCAGGTTAATTGTGTAGTCAATTATGATCTCCCAATCAAATACACAAGTGGCCCCAGGACACATGACCCAGAGCCTGATTATGAGGTGTACTTGCATAGAATTGGAAGGGCAGGGCGTTTTGGTCGCAAGGGGGCTGTGTTTAACTTGATTTGTGGTGATTGGGATGAATTGATCATGTCAAAGATTGAGCAGTATTTCAACTCCCCAGTAACAGAGGTTCAGAATACTGAAGAAGCATTTGAAGGTGCTCTTAAATCAGCTGGCTTACTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005730 GO:0005737 GO:0005886 GO:0006139 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0008026 GO:0008104 GO:0008150 GO:0008152 GO:0008186 GO:0009266 GO:0009408 GO:0009409 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0010501 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0016973 GO:0017111 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033993 GO:0034613 GO:0034641 GO:0042221 GO:0042623 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070035 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0090304 GO:0097305 GO:0140098 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

514

Amino Acids

56.66

Weight (kDa)

5.09

Isoelectric Point (pI)

39.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001022)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53110
fragaria_vesca	FvH4_6g17230 FvH4_6g17230 FvH4_6g17230 FvH4_6g17280 FvH4_6g17280
malus_domestica	MD12G1102600.v1.1 MD14G1096800.v1.1
prunus_persica	Prupe.3G009100_v2.0.a1 Prupe.7G122600_v2.0.a1
pyrus_communis	pycom03g08760 pycom12g10060 pycom14g09450
rosa_chinensis	RchiOBHm_Chr3g0471311 RchiOBHm_Chr3g0471321 RchiOBHm_Chr3g0471361 RchiOBHm_Chr3g0471391
rosa_laevigata	RLG00000024181 RLG00000024187 RLG00000024188
rosa_multiflora	Rmu_sc0006582.1_g000015 Rmu_sc0006582.1_g000018 Rmu_sc0009082.1_g000003 Rmu_sc0010513.1_g000003 Rmu_sc0015755.1_g000002 Rmu_sc0030425.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409980 Rroxscaffold_6G00410000 Rroxscaffold_6G00410060 Rroxscaffold_6G00410080
rosa_rugosa	Rorug03G0117100 Rorug03G0117100 Rorug03G0117100 Rorug03G0117400 Rorug03G0117500 Rorug03G0117500
rosa_samantha	Rh3AG166500 Rh3AG166600 Rh3AG166700 Rh3AG167100 Rh3BG191900 Rh3BG192000 Rh3BG192100 Rh3BG192400 Rh3BG192500 Rh3BG192800 Rh3CG182200 Rh3CG182300 Rh3CG182400 Rh3CG182700 Rh3CG182800 Rh3CG183200 Rh3DG182700 Rh3DG183100 Rh3DG183200 Rh3DG183700 Rh3DG183800
rosa_wichuraiana	Rw3G015670 Rw3G015680 Rw3G015730 Rw3G015760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1193
Acc36I	ACCTGC	1 cut(s)	1261
AccI	GTMKAC	1 cut(s)	191
AccII	CGCG	1 cut(s)	185
AciI	CCGC	4 cut(s)	21, 53, 107, 1145
AclI	AACGTT	1 cut(s)	213
AclWI	GGATC	2 cut(s)	333, 506
AcoI	YGGCCR	4 cut(s)	3, 87, 564, 795
AcsI	RAATTY	1 cut(s)	907
AcuI	CTGAAG	3 cut(s)	371, 572, 1518
AfaI	GTAC	6 cut(s)	302, 605, 712, 992, 1001, 1358
AfeI	AGCGCT	1 cut(s)	131
AfiI	CCNNNNNNNGG	3 cut(s)	109, 160, 1270
AflIII	ACRYGT	2 cut(s)	303, 789
AhdI	GACNNNNNGTC	1 cut(s)	187
AjiI	CACGTC	1 cut(s)	306
AjnI	CCWGG	4 cut(s)	396, 706, 864, 1322
AluBI	AGCT	5 cut(s)	318, 527, 742, 967, 1529
AluI	AGCT	5 cut(s)	318, 527, 742, 967, 1529
Alw21I	GWGCWC	5 cut(s)	100, 655, 676, 1168, 1519
Alw26I	GTCTC	2 cut(s)	2, 1179
AlwI	GGATC	2 cut(s)	333, 506
AlwNI	CAGNNNCTG	1 cut(s)	1343
Ama87I	CYCGRG	4 cut(s)	158, 167, 669, 1251
Aor51HI	AGCGCT	1 cut(s)	131
AoxI	GGCC	6 cut(s)	3, 87, 453, 564, 795, 1318
ApoI	RAATTY	1 cut(s)	907
ArsI	GACNNNNNNTTYG	2 cut(s)	107, 139
Asp700I	GAANNNNTTC	1 cut(s)	242
AspLEI	GCGC	6 cut(s)	58, 132, 187, 278, 538, 1106
AspS9I	GGNCC	3 cut(s)	454, 583, 1319
AsuC2I	CCSGG	1 cut(s)	506
AsuHPI	GGTGA	2 cut(s)	223, 1436
AvaI	CYCGRG	4 cut(s)	158, 167, 669, 1251
AvaII	GGWCC	1 cut(s)	583
AxyI	CCTNAGG	1 cut(s)	531
BalI	TGGCCA	2 cut(s)	566, 797
BanII	GRGCYC	1 cut(s)	168
BbsI	GAAGAC	1 cut(s)	267
Bbv12I	GWGCWC	5 cut(s)	100, 655, 676, 1168, 1519
BccI	CCATC	6 cut(s)	50, 364, 589, 797, 1130, 1205
BceAI	ACGGC	6 cut(s)	66, 102, 172, 263, 283, 738
BciT130I	CCWGG	4 cut(s)	398, 708, 866, 1324
BclI	TGATCA	2 cut(s)	924, 1440
BcnI	CCSGG	1 cut(s)	506
BcoDI	GTCTC	2 cut(s)	2, 1179
BfoI	RGCGCY	3 cut(s)	133, 279, 539
BfuAI	ACCTGC	1 cut(s)	1261
BglII	AGATCT	1 cut(s)	439
BisI	GCNGC	1 cut(s)	54
BlpI	GCTNAGC	1 cut(s)	500
BlsI	GCNGC	1 cut(s)	55
Bme1390I	CCNGG	5 cut(s)	398, 506, 708, 866, 1324
Bme18I	GGWCC	1 cut(s)	583
BmeRI	GACNNNNNGTC	1 cut(s)	187
BmeT110I	CYCGRG	4 cut(s)	158, 167, 669, 1251
BmgBI	CACGTC	1 cut(s)	306
BmgT120I	GGNCC	3 cut(s)	454, 583, 1319
BmiI	GGNNCC	4 cut(s)	165, 201, 703, 1321
BmrFI	CCNGG	5 cut(s)	398, 506, 708, 866, 1324
BmrI	ACTGGG	3 cut(s)	381, 1064, 1469
BmsI	GCATC	2 cut(s)	486, 1126
BmuI	ACTGGG	3 cut(s)	381, 1064, 1469
BpiI	GAAGAC	1 cut(s)	267
Bpu10I	CCTNAGC	1 cut(s)	450
Bpu1102I	GCTNAGC	1 cut(s)	500
BpuMI	CCSGG	1 cut(s)	506
BsaBI	GATNNNNATC	3 cut(s)	330, 731, 1028
BsaJI	CCNNGG	4 cut(s)	159, 706, 798, 1322
BsaWI	WCCGGW	2 cut(s)	118, 202
BsaXI	ACNNNNNCTCC	6 cut(s)	56, 82, 86, 112, 637, 667
Bsc4I	CCNNNNNNNGG	3 cut(s)	109, 160, 1270
Bse118I	RCCGGY	2 cut(s)	109, 287
Bse1I	ACTGG	5 cut(s)	93, 387, 677, 1059, 1475
Bse21I	CCTNAGG	1 cut(s)	531
Bse8I	GATNNNNATC	3 cut(s)	330, 731, 1028
BseBI	CCWGG	4 cut(s)	398, 708, 866, 1324
BseDI	CCNNGG	4 cut(s)	159, 706, 798, 1322
BseGI	GGATG	6 cut(s)	501, 732, 808, 820, 1216, 1438
BseJI	GATNNNNATC	3 cut(s)	330, 731, 1028
BseLI	CCNNNNNNNGG	3 cut(s)	109, 160, 1270
BseMII	CTCAG	3 cut(s)	464, 514, 545
BseNI	ACTGG	5 cut(s)	93, 387, 677, 1059, 1475
BseRI	GAGGAG	4 cut(s)	64, 158, 176, 519
BseYI	CCCAGC	2 cut(s)	132, 742
Bsh1236I	CGCG	1 cut(s)	185
Bsh1285I	CGRYCG	1 cut(s)	288
BshFI	GGCC	6 cut(s)	5, 89, 455, 566, 797, 1320
BsiEI	CGRYCG	1 cut(s)	288
BsiHKAI	GWGCWC	5 cut(s)	100, 655, 676, 1168, 1519
BsiHKCI	CYCGRG	4 cut(s)	158, 167, 669, 1251
BsiSI	CCGG	5 cut(s)	110, 119, 203, 288, 505
BslFI	GGGAC	1 cut(s)	617
BslI	CCNNNNNNNGG	3 cut(s)	109, 160, 1270
BsmAI	GTCTC	2 cut(s)	2, 1179
BsmFI	GGGAC	1 cut(s)	617
BsnI	GGCC	6 cut(s)	5, 89, 455, 566, 797, 1320
BsoBI	CYCGRG	4 cut(s)	158, 167, 669, 1251
Bsp1286I	GDGCHC	6 cut(s)	100, 168, 655, 676, 1168, 1519
Bsp143I	GATC	8 cut(s)	228, 325, 439, 511, 696, 924, 1294, 1440
Bsp1720I	GCTNAGC	1 cut(s)	500
BspACI	CCGC	4 cut(s)	21, 53, 107, 1145
BspANI	GGCC	6 cut(s)	5, 89, 455, 566, 797, 1320
BspCNI	CTCAG	3 cut(s)	463, 513, 544
BspFNI	CGCG	1 cut(s)	185
BspLI	GGNNCC	4 cut(s)	165, 201, 703, 1321
BspMI	ACCTGC	1 cut(s)	1261
BspPI	GGATC	2 cut(s)	333, 506
BspQI	GCTCTTC	1 cut(s)	957
BsrFI	RCCGGY	2 cut(s)	109, 287
BsrI	ACTGG	5 cut(s)	93, 387, 677, 1059, 1475
BssAI	RCCGGY	2 cut(s)	109, 287
BssECI	CCNNGG	4 cut(s)	159, 706, 798, 1322
BssMI	GATC	8 cut(s)	228, 325, 439, 511, 696, 924, 1294, 1440
BssT1I	CCWWGG	1 cut(s)	798
Bst2UI	CCWGG	4 cut(s)	398, 708, 866, 1324
Bst4CI	ACNGT	3 cut(s)	31, 1004, 1174
Bst6I	CTCTTC	2 cut(s)	953, 957
BstAPI	GCANNNNNTGC	1 cut(s)	626
BstC8I	GCNNGC	2 cut(s)	111, 1531
BstDEI	CTNAG	3 cut(s)	450, 500, 531
BstF5I	GGATG	6 cut(s)	501, 732, 808, 820, 1216, 1438
BstFNI	CGCG	1 cut(s)	185
BstH2I	RGCGCY	3 cut(s)	133, 279, 539
BstHHI	GCGC	6 cut(s)	58, 132, 187, 278, 538, 1106
BstKTI	GATC	8 cut(s)	231, 328, 442, 514, 699, 927, 1297, 1443
BstMAI	GTCTC	2 cut(s)	2, 1179
BstMBI	GATC	8 cut(s)	228, 325, 439, 511, 696, 924, 1294, 1440
BstMCI	CGRYCG	1 cut(s)	288
BstMWI	GCNNNNNNNGC	6 cut(s)	95, 346, 496, 533, 626, 861
BstNI	CCWGG	4 cut(s)	398, 708, 866, 1324
BstNSI	RCATGY	1 cut(s)	793
BstSCI	CCNGG	5 cut(s)	396, 504, 706, 864, 1322
BstUI	CGCG	1 cut(s)	185
BstV2I	GAAGAC	1 cut(s)	267
BstX2I	RGATCY	2 cut(s)	325, 439
BstXI	CCANNNNNNTGG	1 cut(s)	562
BstYI	RGATCY	2 cut(s)	325, 439
Bsu36I	CCTNAGG	1 cut(s)	531
BsuRI	GGCC	6 cut(s)	5, 89, 455, 566, 797, 1320
BtrI	CACGTC	1 cut(s)	306
BtsCI	GGATG	6 cut(s)	501, 732, 808, 820, 1216, 1438
BtsI	GCAGTG	2 cut(s)	859, 940
BtsIMutI	CAGTG	4 cut(s)	100, 859, 940, 1170
BveI	ACCTGC	1 cut(s)	1261
Cac8I	GCNNGC	2 cut(s)	111, 1531
CaiI	CAGNNNCTG	1 cut(s)	1343
CfoI	GCGC	6 cut(s)	58, 132, 187, 278, 538, 1106
Cfr10I	RCCGGY	2 cut(s)	109, 287
Cfr13I	GGNCC	3 cut(s)	454, 583, 1319
CseI	GACGC	2 cut(s)	23, 191
Csp6I	GTAC	6 cut(s)	301, 604, 711, 991, 1000, 1357
CspCI	CAANNNNNGTGG	2 cut(s)	916, 951
CviAII	CATG	4 cut(s)	415, 790, 1331, 1444
CviQI	GTAC	6 cut(s)	301, 604, 711, 991, 1000, 1357
DdeI	CTNAG	3 cut(s)	450, 500, 531
DpnI	GATC	8 cut(s)	230, 327, 441, 513, 698, 926, 1296, 1442
DpnII	GATC	8 cut(s)	228, 325, 439, 511, 696, 924, 1294, 1440
DrdI	GACNNNNNNGTC	1 cut(s)	1193
DriI	GACNNNNNGTC	1 cut(s)	187
DseDI	GACNNNNNNGTC	1 cut(s)	1193
EaeI	YGGCCR	4 cut(s)	3, 87, 564, 795
Eam1104I	CTCTTC	2 cut(s)	953, 957
Eam1105I	GACNNNNNGTC	1 cut(s)	187
EarI	CTCTTC	2 cut(s)	953, 957
EciI	GGCGGA	1 cut(s)	10
Eco130I	CCWWGG	1 cut(s)	798
Eco24I	GRGCYC	1 cut(s)	168
Eco47I	GGWCC	1 cut(s)	583
Eco47III	AGCGCT	1 cut(s)	131
Eco57I	CTGAAG	3 cut(s)	371, 572, 1518
Eco81I	CCTNAGG	1 cut(s)	531
Eco88I	CYCGRG	4 cut(s)	158, 167, 669, 1251
EcoO109I	RGGNCCY	1 cut(s)	583
EcoRII	CCWGG	4 cut(s)	396, 706, 864, 1322
EcoT14I	CCWWGG	1 cut(s)	798
EcoT38I	GRGCYC	1 cut(s)	168
ErhI	CCWWGG	1 cut(s)	798
FaeI	CATG	4 cut(s)	418, 793, 1334, 1447
FalI	AAGNNNNNCTT	4 cut(s)	791, 823, 1503, 1535
FaqI	GGGAC	1 cut(s)	617
FatI	CATG	4 cut(s)	414, 789, 1330, 1443
FbaI	TGATCA	2 cut(s)	924, 1440
FblI	GTMKAC	1 cut(s)	191
Fnu4HI	GCNGC	1 cut(s)	54
FokI	GGATG	6 cut(s)	508, 739, 815, 827, 1223, 1445
FriOI	GRGCYC	1 cut(s)	168
Fsp4HI	GCNGC	1 cut(s)	54
GlaI	GCGC	6 cut(s)	57, 131, 186, 277, 537, 1105
GluI	GCNGC	1 cut(s)	54
GsaI	CCCAGC	2 cut(s)	136, 746
HaeII	RGCGCY	3 cut(s)	133, 279, 539
HaeIII	GGCC	6 cut(s)	5, 89, 455, 566, 797, 1320
HapII	CCGG	5 cut(s)	110, 119, 203, 288, 505
HgaI	GACGC	2 cut(s)	23, 191
HhaI	GCGC	6 cut(s)	58, 132, 187, 278, 538, 1106
Hin1II	CATG	4 cut(s)	418, 793, 1334, 1447
Hin6I	GCGC	6 cut(s)	56, 130, 185, 276, 536, 1104
HinP1I	GCGC	6 cut(s)	56, 130, 185, 276, 536, 1104
HinfI	GANTC	5 cut(s)	122, 263, 331, 763, 818
HpaII	CCGG	5 cut(s)	110, 119, 203, 288, 505
HphI	GGTGA	2 cut(s)	223, 1436
Hpy166II	GTNNAC	6 cut(s)	192, 211, 303, 606, 1000, 1357
Hpy188I	TCNGA	7 cut(s)	82, 199, 330, 573, 591, 701, 1491
Hpy188III	TCNNGA	7 cut(s)	158, 379, 669, 736, 812, 918, 1007
Hpy8I	GTNNAC	6 cut(s)	192, 211, 303, 606, 1000, 1357
Hpy99I	CGWCG	2 cut(s)	254, 310
HpyAV	CCTTC	5 cut(s)	346, 596, 829, 1368, 1505
HpyCH4III	ACNGT	3 cut(s)	31, 1004, 1174
HpyCH4IV	ACGT	2 cut(s)	213, 305
HpyCH4V	TGCA	2 cut(s)	1117, 1363
HpyF10VI	GCNNNNNNNGC	6 cut(s)	95, 346, 496, 533, 626, 861
HpyF3I	CTNAG	3 cut(s)	450, 500, 531
HpySE526I	ACGT	2 cut(s)	213, 305
Hsp92II	CATG	4 cut(s)	418, 793, 1334, 1447
HspAI	GCGC	6 cut(s)	56, 130, 185, 276, 536, 1104
KroI	GCCGGC	1 cut(s)	109
KroNI	GCCGGC	1 cut(s)	111
Ksp22I	TGATCA	2 cut(s)	924, 1440
Kzo9I	GATC	8 cut(s)	228, 325, 439, 511, 696, 924, 1294, 1440
LguI	GCTCTTC	1 cut(s)	957
LmnI	GCTCC	4 cut(s)	103, 163, 532, 658
LweI	GCATC	2 cut(s)	486, 1126
MaeII	ACGT	2 cut(s)	213, 305
MaeIII	GTNAC	4 cut(s)	280, 901, 1147, 1477
MalI	GATC	8 cut(s)	230, 327, 441, 513, 698, 926, 1296, 1442
MboI	GATC	8 cut(s)	228, 325, 439, 511, 696, 924, 1294, 1440
MflI	RGATCY	2 cut(s)	325, 439
MhlI	GDGCHC	6 cut(s)	100, 168, 655, 676, 1168, 1519
MlsI	TGGCCA	2 cut(s)	566, 797
MluNI	TGGCCA	2 cut(s)	566, 797
MlyI	GAGTC	2 cut(s)	131, 257
Mox20I	TGGCCA	2 cut(s)	566, 797
MreI	CGCCGGCG	1 cut(s)	109
MroNI	GCCGGC	1 cut(s)	109
MroXI	GAANNNNTTC	1 cut(s)	242
MscI	TGGCCA	2 cut(s)	566, 797
Msp20I	TGGCCA	2 cut(s)	566, 797
MspA1I	CMGCKG	1 cut(s)	1529
MspI	CCGG	5 cut(s)	110, 119, 203, 288, 505
MspR9I	CCNGG	5 cut(s)	398, 506, 708, 866, 1324
MvaI	CCWGG	4 cut(s)	398, 708, 866, 1324
MvnI	CGCG	1 cut(s)	185
MwoI	GCNNNNNNNGC	6 cut(s)	95, 346, 496, 533, 626, 861
NaeI	GCCGGC	1 cut(s)	111
NciI	CCSGG	1 cut(s)	506
NdeII	GATC	8 cut(s)	228, 325, 439, 511, 696, 924, 1294, 1440
NgoMIV	GCCGGC	1 cut(s)	109
NlaIII	CATG	4 cut(s)	418, 793, 1334, 1447
NlaIV	GGNNCC	4 cut(s)	165, 201, 703, 1321
NmeAIII	GCCGAG	1 cut(s)	31
NmuCI	GTSAC	1 cut(s)	901
NspI	RCATGY	1 cut(s)	793
PaeR7I	CTCGAG	2 cut(s)	669, 1251
PciI	ACATGT	1 cut(s)	789
PciSI	GCTCTTC	1 cut(s)	957
PcsI	WCGNNNNNNNCGW	7 cut(s)	21, 147, 156, 255, 302, 644, 653
PdiI	GCCGGC	1 cut(s)	111
PdmI	GAANNNNTTC	1 cut(s)	242
PfeI	GAWTC	3 cut(s)	331, 763, 818
PflFI	GACNNNGTC	1 cut(s)	29
PkrI	GCNGC	1 cut(s)	55
PleI	GAGTC	2 cut(s)	130, 257
PpsI	GAGTC	2 cut(s)	130, 257
PpuMI	RGGWCCY	1 cut(s)	583
PscI	ACATGT	1 cut(s)	789
Psp1406I	AACGTT	1 cut(s)	213
Psp5II	RGGWCCY	1 cut(s)	583
Psp6I	CCWGG	4 cut(s)	396, 706, 864, 1322
PspFI	CCCAGC	2 cut(s)	132, 742
PspGI	CCWGG	4 cut(s)	396, 706, 864, 1322
PspN4I	GGNNCC	4 cut(s)	165, 201, 703, 1321
PspPI	GGNCC	3 cut(s)	454, 583, 1319
PspPPI	RGGWCCY	1 cut(s)	583
PspXI	VCTCGAGB	1 cut(s)	1251
PsrI	GAACNNNNNNTAC	4 cut(s)	694, 726, 1470, 1502
PstNI	CAGNNNCTG	1 cut(s)	1343
PsuI	RGATCY	2 cut(s)	325, 439
PsyI	GACNNNGTC	1 cut(s)	29
PvuII	CAGCTG	1 cut(s)	1529
RsaI	GTAC	6 cut(s)	302, 605, 712, 992, 1001, 1358
RsaNI	GTAC	6 cut(s)	301, 604, 711, 991, 1000, 1357
SapI	GCTCTTC	1 cut(s)	957
SatI	GCNGC	1 cut(s)	54
Sau3AI	GATC	8 cut(s)	228, 325, 439, 511, 696, 924, 1294, 1440
Sau96I	GGNCC	3 cut(s)	454, 583, 1319
SchI	GAGTC	2 cut(s)	131, 257
ScrFI	CCNGG	5 cut(s)	398, 506, 708, 866, 1324
SduI	GDGCHC	6 cut(s)	100, 168, 655, 676, 1168, 1519
SfaNI	GCATC	2 cut(s)	486, 1126
Sfr274I	CTCGAG	2 cut(s)	669, 1251
SgrAI	CRCCGGYG	1 cut(s)	109
SinI	GGWCC	1 cut(s)	583
SlaI	CTCGAG	2 cut(s)	669, 1251
SmlI	CTYRAG	2 cut(s)	669, 1251
SmoI	CTYRAG	2 cut(s)	669, 1251
SsiI	CCGC	4 cut(s)	21, 53, 107, 1145
SspI	AATATT	2 cut(s)	271, 1047
StyD4I	CCNGG	5 cut(s)	396, 504, 706, 864, 1322
StyI	CCWWGG	1 cut(s)	798
TaaI	ACNGT	3 cut(s)	31, 1004, 1174
TaiI	ACGT	2 cut(s)	216, 308
TaqI	TCGA	6 cut(s)	45, 249, 321, 510, 670, 1252
TatI	WGTACW	4 cut(s)	603, 990, 999, 1356
TauI	GCSGC	1 cut(s)	56
TfiI	GAWTC	3 cut(s)	331, 763, 818
TscAI	CASTG	4 cut(s)	100, 866, 940, 1177
TseFI	GTSAC	1 cut(s)	901
Tsp45I	GTSAC	1 cut(s)	901
TspDTI	ATGAA	4 cut(s)	909, 957, 1026, 1449
TspGWI	ACGGA	2 cut(s)	645, 653
TspRI	CASTG	4 cut(s)	100, 866, 940, 1177
Tth111I	GACNNNGTC	1 cut(s)	29
VpaK11BI	GGWCC	1 cut(s)	583
XapI	RAATTY	1 cut(s)	907
XceI	RCATGY	1 cut(s)	793
XcmI	CCANNNNNNNNNTGG	2 cut(s)	559, 574
XhoI	CTCGAG	2 cut(s)	669, 1251
XmiI	GTMKAC	1 cut(s)	191
XmnI	GAANNNNTTC	1 cut(s)	242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.