Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0015755.1

Orthogroup ID

OG0001022

Physical Location & Seq

Genomic Coordinates Reverse (-)

6580 .. 11251

Gene Structure 4672 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0015755.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

atgtactccaccctggcccatgccaaacagtttcttgttccgcacgtccaccggaacgacgccgtttcatcccctctgggattcgatctcaacttttccggcctgaacatccacagagagaacatgttcctcgacgaccctgaagactccactttcacaatcgtgagtgacacgcggtacagttcggtgagaagttttgaggatctgaatctgtcgccggaggtgattagggctttgtatgtggacatgggctacaggaggcccagtaaaattcaggcaattactctgccgatgattctgacgcctccttataaggatttggttgctcaagcacacaatggtactgggaaaactacttgctttgggctcgggatgctgggccgaatcgatcctggtctgaaagctcctcaggcgctctgcatttgccccaccagagagctggccattcagatattggaggtgcttcagaagatggggatgtacacaggaataaaaatggagtgtgctgtcccaagtgtgacgccgagttctacatctgttcgtgaccgagcaccagtgacagcacatattgtgattggaacttctggtacagtgcataagcttatgtcatacaagaagctgggtgtaagcaaattgaaggttcttgtttttgatgaggctgatcacatgcttgccgaggatggctttagagatgattctttaaggataaagaaggagatagataaatttagccctcactgccaggtgcttttgttttctgctacttttaatgaaatgatcacaaagttcataccgagggtgatgaaagattataatcaactatgtttaaagaaagaagagctgtctttggaagctgtgaagcagtacaaggtctactgccctgatgagctgagcaaaattgatgtgatcaaaaacaaaatatttgatctaggagattacattggacagagaataatatttgtaaggtcgagaactagtgcaaaaatgttgcatgatgaacttgttggagatggttattcagttactaccatacatggcgccctcagtgttgaagagagagacaaaatagtcaaagagttcaaagatggtttaaccaaagttctcatatcaactgatctcctcgctcgaggctttgatcaacagcaggttaattgtgttgtcaattatgatcttccaatcaagcgtggagcttcttcaagcacacgggatcctccagagcctgattatgagctttacttacatagatgtggccgggcaggtcgttttgggagcaagggatctgtgttcaacttgctttgccttgatacggataagctggtcatgacaaaaattgagcgctactataacatccaagtaccagaggtaataacttgcacctcgttattatacgtctgccagaagcttggagctgaagaagagtcggagttgggatctgaagccatggcgacccgacttgcgcgaagaacaatagcttcatcttctctgttccggcgatcaacggcgatcaccgtcggccacggtggctccgaatcgaggcggcctttatcgtcgtcgagtagcaaatccgagaagccggagaagaagaagccgctggaccgtctatcgacgatcatagacgccgtcaacgagcgcaaactccctcctgagcttcgcggccggcgcaacaccgtcaggtcggaaactgatataataaacgtggtggagcagagaatatggcattcgatggaggaagggcagtttgagaatttgccggggaaagggaaaccgctggacctgagttgcaaccctcacgcagacccggcagatgacacattgtatagaattctatcgaagaatggttgcgcgccgcggtgggtggagctgaacaaagagatcaggagtcaggcggcggaatggaggagggctctgaagaaagcttgggagatgagaaatggtgatggagatcaggagaaatgggtggagacttgtgaggctttgaaagtgcagttgttgcagattaataacaaggttttggagtataatgactataatctgattgttccttttgggcgccaaatgtttggaatcaagtgggagaaggagctggatggtatggaattgaaagattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005730 GO:0005737 GO:0005886 GO:0006139 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0008026 GO:0008104 GO:0008150 GO:0008152 GO:0008186 GO:0009266 GO:0009408 GO:0009409 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0010501 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0016973 GO:0017111 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033993 GO:0034613 GO:0034641 GO:0042221 GO:0042623 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070035 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0090304 GO:0097305 GO:0140098 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

702

Amino Acids

79.3

Weight (kDa)

8.19

Isoelectric Point (pI)

42.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001022)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53110
fragaria_vesca	FvH4_6g17230 FvH4_6g17230 FvH4_6g17230 FvH4_6g17280 FvH4_6g17280
malus_domestica	MD12G1102600.v1.1 MD14G1096800.v1.1
prunus_persica	Prupe.3G009100_v2.0.a1 Prupe.7G122600_v2.0.a1
pyrus_communis	pycom03g08760 pycom12g10060 pycom14g09450
rosa_chinensis	RchiOBHm_Chr3g0471311 RchiOBHm_Chr3g0471321 RchiOBHm_Chr3g0471361 RchiOBHm_Chr3g0471391
rosa_laevigata	RLG00000024181 RLG00000024187 RLG00000024188
rosa_multiflora	Rmu_sc0006582.1_g000015 Rmu_sc0006582.1_g000018 Rmu_sc0009082.1_g000003 Rmu_sc0010513.1_g000003 Rmu_sc0015755.1_g000002 Rmu_sc0030425.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409980 Rroxscaffold_6G00410000 Rroxscaffold_6G00410060 Rroxscaffold_6G00410080
rosa_rugosa	Rorug03G0117100 Rorug03G0117100 Rorug03G0117100 Rorug03G0117400 Rorug03G0117500 Rorug03G0117500
rosa_samantha	Rh3AG166500 Rh3AG166600 Rh3AG166700 Rh3AG167100 Rh3BG191900 Rh3BG192000 Rh3BG192100 Rh3BG192400 Rh3BG192500 Rh3BG192800 Rh3CG182200 Rh3CG182300 Rh3CG182400 Rh3CG182700 Rh3CG182800 Rh3CG183200 Rh3DG182700 Rh3DG183100 Rh3DG183200 Rh3DG183700 Rh3DG183800
rosa_wichuraiana	Rw3G015670 Rw3G015680 Rw3G015730 Rw3G015760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	312, 813
AasI	GACNNNNNNGTC	1 cut(s)	1067
Acc36I	ACCTGC	2 cut(s)	1135, 1247
AccB1I	GGYRCC	2 cut(s)	1037, 2049
AccI	GTMKAC	1 cut(s)	873
AccII	CGCG	5 cut(s)	175, 1459, 1653, 1844, 1849
AclWI	GGATC	6 cut(s)	210, 383, 1202, 1215, 1285, 1438
AcoI	YGGCCR	4 cut(s)	441, 1249, 1513, 1654
AcsI	RAATTY	4 cut(s)	270, 725, 1744, 1821
AcuI	CTGAAG	5 cut(s)	162, 449, 1431, 1455, 1928
AcyI	GRCGYC	6 cut(s)	60, 302, 521, 1038, 1617, 2050
AfaI	GTAC	7 cut(s)	5, 179, 343, 482, 589, 866, 1356
AfeI	AGCGCT	1 cut(s)	1337
AfiI	CCNNNNNNNGG	3 cut(s)	1306, 1533, 1757
AflIII	ACRYGT	1 cut(s)	123
AgsI	TTSAA	7 cut(s)	637, 1052, 1081, 1197, 1288, 1978, 2101
AhlI	ACTAGT	1 cut(s)	974
AjiI	CACGTC	1 cut(s)	46
AjnI	CCWGG	3 cut(s)	12, 391, 741
AleI	CACNNNNGTG	1 cut(s)	161
Alw21I	GWGCWC	1 cut(s)	553
Alw26I	GTCTC	2 cut(s)	1053, 1955
AlwI	GGATC	6 cut(s)	210, 383, 1202, 1215, 1285, 1438
AlwNI	CAGNNNCTG	1 cut(s)	1220
Ama87I	CYCGRG	2 cut(s)	368, 1125
Aor51HI	AGCGCT	1 cut(s)	1337
AoxI	GGCC	9 cut(s)	15, 100, 260, 379, 441, 1249, 1513, 1538, 1654
ApoI	RAATTY	4 cut(s)	270, 725, 1744, 1821
AseI	ATTAAT	1 cut(s)	1998
Asp700I	GAANNNNTTC	1 cut(s)	125
AspLEI	GCGC	9 cut(s)	415, 1040, 1338, 1459, 1632, 1662, 1844, 1846, 2052
AspS9I	GGNCC	5 cut(s)	16, 261, 379, 1594, 1771
AsuC2I	CCSGG	3 cut(s)	1253, 1752, 1799
AsuHPI	GGTGA	5 cut(s)	199, 235, 811, 1498, 1946
AvaI	CYCGRG	2 cut(s)	368, 1125
AvaII	GGWCC	2 cut(s)	1594, 1771
AxyI	CCTNAGG	1 cut(s)	408
BalI	TGGCCA	1 cut(s)	443
BamHI	GGATCC	1 cut(s)	1207
BanI	GGYRCC	2 cut(s)	1037, 2049
BanII	GRGCYC	2 cut(s)	369, 1906
BbsI	GAAGAC	1 cut(s)	150
Bbv12I	GWGCWC	1 cut(s)	553
BccI	CCATC	7 cut(s)	466, 674, 1004, 1079, 1717, 1931, 2081
BceAI	ACGGC	3 cut(s)	47, 1515, 1604
BciT130I	CCWGG	3 cut(s)	14, 393, 743
BclI	TGATCA	4 cut(s)	661, 777, 906, 1135
BcnI	CCSGG	3 cut(s)	1253, 1752, 1799
BcoDI	GTCTC	2 cut(s)	1053, 1955
BcuI	ACTAGT	1 cut(s)	974
BfaI	CTAG	2 cut(s)	929, 975
BfmI	CTRYAG	1 cut(s)	253
BfoI	RGCGCY	4 cut(s)	416, 1041, 1339, 2053
BfuAI	ACCTGC	2 cut(s)	1135, 1247
BglI	GCCNNNNNGGC	1 cut(s)	1521
BisI	GCNGC	5 cut(s)	1538, 1589, 1654, 1847, 1887
BlpI	GCTNAGC	1 cut(s)	890
BlsI	GCNGC	5 cut(s)	1539, 1590, 1655, 1848, 1888
Bme1390I	CCNGG	6 cut(s)	14, 393, 743, 1253, 1752, 1799
Bme18I	GGWCC	2 cut(s)	1594, 1771
BmeT110I	CYCGRG	2 cut(s)	368, 1125
BmgBI	CACGTC	1 cut(s)	46
BmgT120I	GGNCC	5 cut(s)	16, 261, 379, 1594, 1771
BmiI	GGNNCC	4 cut(s)	1039, 1209, 1525, 2051
BmrFI	CCNGG	6 cut(s)	14, 393, 743, 1253, 1752, 1799
BmrI	ACTGGG	2 cut(s)	258, 354
BmsI	GCATC	1 cut(s)	363
BmuI	ACTGGG	2 cut(s)	258, 354
BpiI	GAAGAC	1 cut(s)	150
BplI	GAGNNNNNCTC	2 cut(s)	1888, 1920
BpmI	CTGGAG	1 cut(s)	1197
Bpu10I	CCTNAGC	1 cut(s)	1644
Bpu1102I	GCTNAGC	1 cut(s)	890
BpuEI	CTTGAG	1 cut(s)	312
BpuMI	CCSGG	3 cut(s)	1253, 1752, 1799
Bsa29I	ATCGAT	1 cut(s)	387
BsaBI	GATNNNNATC	3 cut(s)	207, 813, 1941
BsaHI	GRCGYC	6 cut(s)	60, 302, 521, 1038, 1617, 2050
BsaJI	CCNNGG	7 cut(s)	12, 675, 794, 1440, 1516, 1751, 1847
BsaWI	WCCGGW	1 cut(s)	51
BsaXI	ACNNNNNCTCC	4 cut(s)	250, 280, 1508, 1538
Bsc4I	CCNNNNNNNGG	3 cut(s)	1306, 1533, 1757
Bse118I	RCCGGY	1 cut(s)	1656
Bse1I	ACTGG	3 cut(s)	264, 349, 554
Bse21I	CCTNAGG	1 cut(s)	408
Bse8I	GATNNNNATC	3 cut(s)	207, 813, 1941
BseBI	CCWGG	3 cut(s)	14, 393, 743
BseCI	ATCGAT	1 cut(s)	387
BseDI	CCNNGG	7 cut(s)	12, 675, 794, 1440, 1516, 1751, 1847
BseGI	GGATG	7 cut(s)	68, 108, 378, 483, 685, 1347, 2092
BseJI	GATNNNNATC	3 cut(s)	207, 813, 1941
BseLI	CCNNNNNNNGG	3 cut(s)	1306, 1533, 1757
BseMII	CTCAG	5 cut(s)	422, 881, 1057, 1635, 1766
BseNI	ACTGG	3 cut(s)	264, 349, 554
BsePI	GCGCGC	1 cut(s)	1842
BseRI	GAGGAG	3 cut(s)	396, 1109, 1912
BseX3I	CGGCCG	1 cut(s)	1654
BseYI	CCCAGC	2 cut(s)	376, 619
BsgI	GTGCAG	1 cut(s)	2003
Bsh1236I	CGCG	5 cut(s)	175, 1459, 1653, 1844, 1849
Bsh1285I	CGRYCG	1 cut(s)	1657
BshFI	GGCC	9 cut(s)	17, 102, 262, 381, 443, 1251, 1515, 1540, 1656
BshNI	GGYRCC	2 cut(s)	1037, 2049
BshVI	ATCGAT	1 cut(s)	387
BsiEI	CGRYCG	1 cut(s)	1657
BsiHKAI	GWGCWC	1 cut(s)	553
BsiHKCI	CYCGRG	2 cut(s)	368, 1125
BsiSI	CCGG	9 cut(s)	52, 99, 218, 1252, 1489, 1574, 1657, 1751, 1799
BslFI	GGGAC	1 cut(s)	494
BslI	CCNNNNNNNGG	3 cut(s)	1306, 1533, 1757
BsmAI	GTCTC	2 cut(s)	1053, 1955
BsmFI	GGGAC	1 cut(s)	494
BsmI	GAATGC	1 cut(s)	1717
BsnI	GGCC	9 cut(s)	17, 102, 262, 381, 443, 1251, 1515, 1540, 1656
BsoBI	CYCGRG	2 cut(s)	368, 1125
Bsp1286I	GDGCHC	3 cut(s)	369, 553, 1906
Bsp1407I	TGTACA	1 cut(s)	480
Bsp1720I	GCTNAGC	1 cut(s)	890
Bsp19I	CCATGG	1 cut(s)	1440
BspANI	GGCC	9 cut(s)	17, 102, 262, 381, 443, 1251, 1515, 1540, 1656
BspCNI	CTCAG	5 cut(s)	421, 882, 1056, 1636, 1767
BspDI	ATCGAT	1 cut(s)	387
BspFNI	CGCG	5 cut(s)	175, 1459, 1653, 1844, 1849
BspHI	TCATGA	1 cut(s)	1320
BspLI	GGNNCC	4 cut(s)	1039, 1209, 1525, 2051
BspMI	ACCTGC	2 cut(s)	1135, 1247
BspPI	GGATC	6 cut(s)	210, 383, 1202, 1215, 1285, 1438
BspQI	GCTCTTC	1 cut(s)	831
BspT107I	GGYRCC	2 cut(s)	1037, 2049
BsrFI	RCCGGY	1 cut(s)	1656
BsrGI	TGTACA	1 cut(s)	480
BsrI	ACTGG	3 cut(s)	264, 349, 554
BssAI	RCCGGY	1 cut(s)	1656
BssECI	CCNNGG	7 cut(s)	12, 675, 794, 1440, 1516, 1751, 1847
BssHII	GCGCGC	1 cut(s)	1842
BssNI	GRCGYC	6 cut(s)	60, 302, 521, 1038, 1617, 2050
BssT1I	CCWWGG	1 cut(s)	1440
Bst2UI	CCWGG	3 cut(s)	14, 393, 743
Bst4CI	ACNGT	7 cut(s)	30, 182, 592, 1510, 1520, 1598, 1669
Bst6I	CTCTTC	3 cut(s)	831, 1047, 1410
BstACI	GRCGYC	6 cut(s)	60, 302, 521, 1038, 1617, 2050
BstAPI	GCANNNNNTGC	1 cut(s)	1990
BstAUI	TGTACA	1 cut(s)	480
BstC8I	GCNNGC	4 cut(s)	441, 672, 1658, 1844
BstDEI	CTNAG	5 cut(s)	408, 890, 1043, 1644, 1775
BstDSI	CCRYGG	3 cut(s)	1440, 1516, 1847
BstF5I	GGATG	7 cut(s)	68, 108, 378, 483, 685, 1347, 2092
BstFNI	CGCG	5 cut(s)	175, 1459, 1653, 1844, 1849
BstH2I	RGCGCY	4 cut(s)	416, 1041, 1339, 2053
BstHHI	GCGC	9 cut(s)	415, 1040, 1338, 1459, 1632, 1662, 1844, 1846, 2052
BstMAI	GTCTC	2 cut(s)	1053, 1955
BstMCI	CGRYCG	1 cut(s)	1657
BstMWI	GCNNNNNNNGC	7 cut(s)	373, 410, 738, 1521, 1659, 1799, 1990
BstNI	CCWGG	3 cut(s)	14, 393, 743
BstNSI	RCATGY	2 cut(s)	127, 670
BstSCI	CCNGG	6 cut(s)	12, 391, 741, 1251, 1750, 1797
BstSFI	CTRYAG	1 cut(s)	253
BstUI	CGCG	5 cut(s)	175, 1459, 1653, 1844, 1849
BstV2I	GAAGAC	1 cut(s)	150
BstX2I	RGATCY	4 cut(s)	202, 1207, 1277, 1430
BstXI	CCANNNNNNTGG	3 cut(s)	439, 1403, 2060
BstYI	RGATCY	4 cut(s)	202, 1207, 1277, 1430
BstZI	CGGCCG	1 cut(s)	1654
Bsu15I	ATCGAT	1 cut(s)	387
Bsu36I	CCTNAGG	1 cut(s)	408
BsuRI	GGCC	9 cut(s)	17, 102, 262, 381, 443, 1251, 1515, 1540, 1656
BsuTUI	ATCGAT	1 cut(s)	387
BtgI	CCRYGG	3 cut(s)	1440, 1516, 1847
BtrI	CACGTC	1 cut(s)	46
BtsCI	GGATG	7 cut(s)	68, 108, 378, 483, 685, 1347, 2092
BtsI	GCAGTG	1 cut(s)	736
BtsIMutI	CAGTG	4 cut(s)	561, 597, 736, 1051
BveI	ACCTGC	2 cut(s)	1135, 1247
Cac8I	GCNNGC	4 cut(s)	441, 672, 1658, 1844
CaiI	CAGNNNCTG	1 cut(s)	1220
CciI	TCATGA	1 cut(s)	1320
CfoI	GCGC	9 cut(s)	415, 1040, 1338, 1459, 1632, 1662, 1844, 1846, 2052
Cfr10I	RCCGGY	1 cut(s)	1656
Cfr13I	GGNCC	5 cut(s)	16, 261, 379, 1594, 1771
Cfr42I	CCGCGG	1 cut(s)	1850
ClaI	ATCGAT	1 cut(s)	387
CseI	GACGC	4 cut(s)	68, 310, 529, 1625
Csp6I	GTAC	7 cut(s)	4, 178, 342, 481, 588, 865, 1355
CviAII	CATG	8 cut(s)	20, 124, 247, 667, 992, 1034, 1321, 1441
CviQI	GTAC	7 cut(s)	4, 178, 342, 481, 588, 865, 1355
DdeI	CTNAG	5 cut(s)	408, 890, 1043, 1644, 1775
DinI	GGCGCC	2 cut(s)	1039, 2051
DraI	TTTAAA	1 cut(s)	828
DrdI	GACNNNNNNGTC	1 cut(s)	1067
DseDI	GACNNNNNNGTC	1 cut(s)	1067
EaeI	YGGCCR	4 cut(s)	441, 1249, 1513, 1654
EagI	CGGCCG	1 cut(s)	1654
Eam1104I	CTCTTC	3 cut(s)	831, 1047, 1410
EarI	CTCTTC	3 cut(s)	831, 1047, 1410
EciI	GGCGGA	1 cut(s)	1904
EclXI	CGGCCG	1 cut(s)	1654
Eco130I	CCWWGG	1 cut(s)	1440
Eco24I	GRGCYC	2 cut(s)	369, 1906
Eco47I	GGWCC	2 cut(s)	1594, 1771
Eco47III	AGCGCT	1 cut(s)	1337
Eco52I	CGGCCG	1 cut(s)	1654
Eco57I	CTGAAG	5 cut(s)	162, 449, 1431, 1455, 1928
Eco81I	CCTNAGG	1 cut(s)	408
Eco88I	CYCGRG	2 cut(s)	368, 1125
EcoRI	GAATTC	1 cut(s)	1821
EcoRII	CCWGG	3 cut(s)	12, 391, 741
EcoT14I	CCWWGG	1 cut(s)	1440
EcoT38I	GRGCYC	2 cut(s)	369, 1906
EgeI	GGCGCC	2 cut(s)	1039, 2051
EheI	GGCGCC	2 cut(s)	1039, 2051
ErhI	CCWWGG	1 cut(s)	1440
FaeI	CATG	8 cut(s)	23, 127, 250, 670, 995, 1037, 1324, 1444
FaqI	GGGAC	1 cut(s)	494
FatI	CATG	8 cut(s)	19, 123, 246, 666, 991, 1033, 1320, 1440
FbaI	TGATCA	4 cut(s)	661, 777, 906, 1135
FblI	GTMKAC	1 cut(s)	873
Fnu4HI	GCNGC	5 cut(s)	1538, 1589, 1654, 1847, 1887
FokI	GGATG	7 cut(s)	55, 95, 385, 490, 692, 1334, 2099
FriOI	GRGCYC	2 cut(s)	369, 1906
Fsp4HI	GCNGC	5 cut(s)	1538, 1589, 1654, 1847, 1887
FspBI	CTAG	2 cut(s)	929, 975
GlaI	GCGC	9 cut(s)	414, 1039, 1337, 1458, 1631, 1661, 1843, 1845, 2051
GluI	GCNGC	5 cut(s)	1538, 1589, 1654, 1847, 1887
GsaI	CCCAGC	2 cut(s)	380, 623
GsuI	CTGGAG	1 cut(s)	1197
HaeII	RGCGCY	4 cut(s)	416, 1041, 1339, 2053
HaeIII	GGCC	9 cut(s)	17, 102, 262, 381, 443, 1251, 1515, 1540, 1656
HapII	CCGG	9 cut(s)	52, 99, 218, 1252, 1489, 1574, 1657, 1751, 1799
HgaI	GACGC	4 cut(s)	68, 310, 529, 1625
HhaI	GCGC	9 cut(s)	415, 1040, 1338, 1459, 1632, 1662, 1844, 1846, 2052
Hin1I	GRCGYC	6 cut(s)	60, 302, 521, 1038, 1617, 2050
Hin1II	CATG	8 cut(s)	23, 127, 250, 670, 995, 1037, 1324, 1444
Hin6I	GCGC	9 cut(s)	413, 1038, 1336, 1457, 1630, 1660, 1842, 1844, 2050
HinP1I	GCGC	9 cut(s)	413, 1038, 1336, 1457, 1630, 1660, 1842, 1844, 2050
HincII	GTYRAC	1 cut(s)	1624
HindII	GTYRAC	1 cut(s)	1624
HindIII	AAGCTT	3 cut(s)	599, 1400, 1914
HpaII	CCGG	9 cut(s)	52, 99, 218, 1252, 1489, 1574, 1657, 1751, 1799
HphI	GGTGA	5 cut(s)	199, 235, 811, 1498, 1946
Hpy166II	GTNNAC	5 cut(s)	49, 244, 483, 874, 1624
Hpy188III	TCNNGA	9 cut(s)	163, 370, 542, 969, 1214, 1321, 1643, 1876, 1946
Hpy8I	GTNNAC	5 cut(s)	49, 244, 483, 874, 1624
Hpy99I	CGWCG	6 cut(s)	62, 137, 1514, 1552, 1555, 1609
HpyAV	CCTTC	4 cut(s)	631, 706, 1724, 2071
HpyCH4III	ACNGT	7 cut(s)	30, 182, 592, 1510, 1520, 1598, 1669
HpyCH4IV	ACGT	3 cut(s)	45, 1389, 1695
HpyCH4V	TGCA	8 cut(s)	420, 595, 980, 991, 1374, 1782, 1984, 1993
HpyF10VI	GCNNNNNNNGC	7 cut(s)	373, 410, 738, 1521, 1659, 1799, 1990
HpyF3I	CTNAG	5 cut(s)	408, 890, 1043, 1644, 1775
HpySE526I	ACGT	3 cut(s)	45, 1389, 1695
Hsp92I	GRCGYC	6 cut(s)	60, 302, 521, 1038, 1617, 2050
Hsp92II	CATG	8 cut(s)	23, 127, 250, 670, 995, 1037, 1324, 1444
HspAI	GCGC	9 cut(s)	413, 1038, 1336, 1457, 1630, 1660, 1842, 1844, 2050
KasI	GGCGCC	2 cut(s)	1037, 2049
KroI	GCCGGC	1 cut(s)	1656
KroNI	GCCGGC	1 cut(s)	1658
Ksp22I	TGATCA	4 cut(s)	661, 777, 906, 1135
KspI	CCGCGG	1 cut(s)	1850
LguI	GCTCTTC	1 cut(s)	831
LmnI	GCTCC	8 cut(s)	409, 1187, 1269, 1406, 1529, 1702, 1858, 2080
LweI	GCATC	1 cut(s)	363
MaeI	CTAG	2 cut(s)	929, 975
MaeII	ACGT	3 cut(s)	45, 1389, 1695
MaeIII	GTNAC	5 cut(s)	167, 517, 542, 556, 1021
MflI	RGATCY	4 cut(s)	202, 1207, 1277, 1430
MhlI	GDGCHC	3 cut(s)	369, 553, 1906
MlsI	TGGCCA	1 cut(s)	443
MluNI	TGGCCA	1 cut(s)	443
Mly113I	GGCGCC	2 cut(s)	1038, 2050
MlyI	GAGTC	3 cut(s)	140, 1427, 1888
MmeI	TCCRAC	3 cut(s)	985, 1401, 1656
Mox20I	TGGCCA	1 cut(s)	443
MroNI	GCCGGC	1 cut(s)	1656
MroXI	GAANNNNTTC	1 cut(s)	125
MscI	TGGCCA	1 cut(s)	443
MseI	TTAA	6 cut(s)	701, 768, 827, 1091, 1149, 1998
MslI	CAYNNNNRTG	2 cut(s)	161, 1245
Msp20I	TGGCCA	1 cut(s)	443
MspA1I	CMGCKG	3 cut(s)	1591, 1768, 1849
MspI	CCGG	9 cut(s)	52, 99, 218, 1252, 1489, 1574, 1657, 1751, 1799
MspR9I	CCNGG	6 cut(s)	14, 393, 743, 1253, 1752, 1799
Mva1269I	GAATGC	1 cut(s)	1717
MvaI	CCWGG	3 cut(s)	14, 393, 743
MvnI	CGCG	5 cut(s)	175, 1459, 1653, 1844, 1849
MwoI	GCNNNNNNNGC	7 cut(s)	373, 410, 738, 1521, 1659, 1799, 1990
NaeI	GCCGGC	1 cut(s)	1658
NarI	GGCGCC	2 cut(s)	1038, 2050
NciI	CCSGG	3 cut(s)	1253, 1752, 1799
NcoI	CCATGG	1 cut(s)	1440
NgoMIV	GCCGGC	1 cut(s)	1656
NlaIII	CATG	8 cut(s)	23, 127, 250, 670, 995, 1037, 1324, 1444
NlaIV	GGNNCC	4 cut(s)	1039, 1209, 1525, 2051
NmeAIII	GCCGAG	2 cut(s)	549, 700
NmuCI	GTSAC	4 cut(s)	167, 517, 542, 556
NspI	RCATGY	2 cut(s)	127, 670
OliI	CACNNNNGTG	1 cut(s)	161
PaeR7I	CTCGAG	1 cut(s)	1125
PagI	TCATGA	1 cut(s)	1320
PauI	GCGCGC	1 cut(s)	1842
PciI	ACATGT	1 cut(s)	123
PciSI	GCTCTTC	1 cut(s)	831
PcsI	WCGNNNNNNNCGW	2 cut(s)	1524, 1623
PctI	GAATGC	1 cut(s)	1717
PdiI	GCCGGC	1 cut(s)	1658
PdmI	GAANNNNTTC	1 cut(s)	125
PfeI	GAWTC	7 cut(s)	81, 208, 295, 384, 695, 1529, 2064
PflFI	GACNNNGTC	1 cut(s)	1619
PkrI	GCNGC	5 cut(s)	1539, 1590, 1655, 1848, 1888
PleI	GAGTC	3 cut(s)	140, 1426, 1887
PluTI	GGCGCC	2 cut(s)	1041, 2053
PpsI	GAGTC	3 cut(s)	140, 1426, 1887
PscI	ACATGT	1 cut(s)	123
PshBI	ATTAAT	1 cut(s)	1998
PsiI	TTATAA	2 cut(s)	312, 813
Psp6I	CCWGG	3 cut(s)	12, 391, 741
PspFI	CCCAGC	2 cut(s)	376, 619
PspGI	CCWGG	3 cut(s)	12, 391, 741
PspN4I	GGNNCC	4 cut(s)	1039, 1209, 1525, 2051
PspPI	GGNCC	5 cut(s)	16, 261, 379, 1594, 1771
PspXI	VCTCGAGB	1 cut(s)	1125
PsrI	GAACNNNNNNTAC	2 cut(s)	571, 603
PstNI	CAGNNNCTG	1 cut(s)	1220
PsuI	RGATCY	4 cut(s)	202, 1207, 1277, 1430
PsyI	GACNNNGTC	1 cut(s)	1619
PteI	GCGCGC	1 cut(s)	1842
RsaI	GTAC	7 cut(s)	5, 179, 343, 482, 589, 866, 1356
RsaNI	GTAC	7 cut(s)	4, 178, 342, 481, 588, 865, 1355
RseI	CAYNNNNRTG	2 cut(s)	161, 1245
SacII	CCGCGG	1 cut(s)	1850
SapI	GCTCTTC	1 cut(s)	831
SaqAI	TTAA	6 cut(s)	701, 768, 827, 1091, 1149, 1998
SatI	GCNGC	5 cut(s)	1538, 1589, 1654, 1847, 1887
Sau96I	GGNCC	5 cut(s)	16, 261, 379, 1594, 1771
SchI	GAGTC	3 cut(s)	140, 1427, 1888
ScrFI	CCNGG	6 cut(s)	14, 393, 743, 1253, 1752, 1799
SduI	GDGCHC	3 cut(s)	369, 553, 1906
SfaNI	GCATC	1 cut(s)	363
SfcI	CTRYAG	1 cut(s)	253
SfoI	GGCGCC	2 cut(s)	1039, 2051
Sfr274I	CTCGAG	1 cut(s)	1125
Sfr303I	CCGCGG	1 cut(s)	1850
SgrBI	CCGCGG	1 cut(s)	1850
SinI	GGWCC	2 cut(s)	1594, 1771
SlaI	CTCGAG	1 cut(s)	1125
SmiMI	CAYNNNNRTG	2 cut(s)	161, 1245
SmlI	CTYRAG	2 cut(s)	327, 1125
SmoI	CTYRAG	2 cut(s)	327, 1125
SpeI	ACTAGT	1 cut(s)	974
SspDI	GGCGCC	2 cut(s)	1037, 2049
SspI	AATATT	2 cut(s)	921, 957
SspMI	CTAG	2 cut(s)	929, 975
StyD4I	CCNGG	6 cut(s)	12, 391, 741, 1251, 1750, 1797
StyI	CCWWGG	1 cut(s)	1440
TaaI	ACNGT	7 cut(s)	30, 182, 592, 1510, 1520, 1598, 1669
TaiI	ACGT	3 cut(s)	48, 1392, 1698
TaqII	GACCGA	1 cut(s)	561
TatI	WGTACW	3 cut(s)	3, 480, 864
TauI	GCSGC	5 cut(s)	1540, 1591, 1656, 1849, 1889
TfiI	GAWTC	7 cut(s)	81, 208, 295, 384, 695, 1529, 2064
Tru1I	TTAA	6 cut(s)	701, 768, 827, 1091, 1149, 1998
Tru9I	TTAA	6 cut(s)	701, 768, 827, 1091, 1149, 1998
TscAI	CASTG	4 cut(s)	561, 597, 743, 1051
TseFI	GTSAC	4 cut(s)	167, 517, 542, 556
Tsp45I	GTSAC	4 cut(s)	167, 517, 542, 556
TspDTI	ATGAA	6 cut(s)	57, 778, 786, 818, 1011, 1464
TspGWI	ACGGA	1 cut(s)	1322
TspRI	CASTG	4 cut(s)	561, 597, 743, 1051
Tth111I	GACNNNGTC	1 cut(s)	1619
VpaK11BI	GGWCC	2 cut(s)	1594, 1771
VspI	ATTAAT	1 cut(s)	1998
XapI	RAATTY	4 cut(s)	270, 725, 1744, 1821
XceI	RCATGY	2 cut(s)	127, 670
XcmI	CCANNNNNNNNNTGG	2 cut(s)	436, 451
XhoI	CTCGAG	1 cut(s)	1125
XmiI	GTMKAC	1 cut(s)	873
XmnI	GAANNNNTTC	1 cut(s)	125
XspI	CTAG	2 cut(s)	929, 975

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.