Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009082.1

Orthogroup ID

OG0001022

Physical Location & Seq

Genomic Coordinates Forward (+)

2646 .. 5969

Gene Structure 3324 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009082.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

atgtactccaccctggcccatgccaaacagtttcttgttccgcacgtccaccggaacgacgccgtttcatcccctctgggactcgatctcaacttttccggcctgaacatccacagagagaacatgttcctcgacgaccctgaagactccactttcacaatcgtgagtgacacgcggtacagttcggtgagaagttttgaggatctgaatctgtcgccggaggtgattagggctttgtatgtggacatgggctacaggaggcccagtaaaattcaggcaattactctgccgatgattctgacgcctccttataaggatttggttgctcaagcacacaatggtactgggaaaactacttgctttgggctcgggatgctgggccgaatcgatcctggtctgaaagctcctcaggcgctctgcatttgccccaccagagagctggccattcagatattggaggtgcttcagaagatggggatgtacacaggaataaaaatggagtgtgctgtcccaagtgtgacgccgagttctacatctgttcgtgaccgagcaccagtgacagcacatattgtgattggaacttctggtacagtgcataagcttatgtcatacaagaagctgggtgtaagcaaattgaaggttcttgtttttgatgaggctgatcacatgcttgccgaggtgcttttgttttctgctacttttaatgaaatgatcacaaagttcataccgagggtgatgaaagattataatcaactatgtttaaagaaagaagagctgtctttggaagctgtgaagcagtacaaggtctactgccctgatgagctgagcaaaattgatgtgatcaaaaacaaaatatttgatctaggagattacattggacagagaataatatttgtaaggtcgagaactagtgcaaaaatgttgcatgatgaacttgttggagatggttattcggttactaccatacatggcgccctcagtgttgaagagagagacaaaatagtcaaagagttcaaagatggtttaaccaaagttctcatatcaactgatctcctcgctcgaggctttgatcaacagcaggttaattgtgttgtcaattatgatcttccaatcaagcgtggagcttcttcaagcacacgggatcctccagagcctgattatgagctttacttacatagatgtggccgggcaggtcgttttgggagcaagggatctgtgttcaacttgctttgccttgatacggataagctggtcatgacaaaaattgagcgctactataacatccaagtaccagaggttaagatcagtgaacgggcttttcaaggggctctaagagctgcggggttactgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005730 GO:0005737 GO:0005886 GO:0006139 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0008026 GO:0008104 GO:0008150 GO:0008152 GO:0008186 GO:0009266 GO:0009408 GO:0009409 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0010501 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0016973 GO:0017111 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033993 GO:0034613 GO:0034641 GO:0042221 GO:0042623 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070035 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0090304 GO:0097305 GO:0140098 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

450

Amino Acids

50.32

Weight (kDa)

8.42

Isoelectric Point (pI)

34.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001022)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53110
fragaria_vesca	FvH4_6g17230 FvH4_6g17230 FvH4_6g17230 FvH4_6g17280 FvH4_6g17280
malus_domestica	MD12G1102600.v1.1 MD14G1096800.v1.1
prunus_persica	Prupe.3G009100_v2.0.a1 Prupe.7G122600_v2.0.a1
pyrus_communis	pycom03g08760 pycom12g10060 pycom14g09450
rosa_chinensis	RchiOBHm_Chr3g0471311 RchiOBHm_Chr3g0471321 RchiOBHm_Chr3g0471361 RchiOBHm_Chr3g0471391
rosa_laevigata	RLG00000024181 RLG00000024187 RLG00000024188
rosa_multiflora	Rmu_sc0006582.1_g000015 Rmu_sc0006582.1_g000018 Rmu_sc0009082.1_g000003 Rmu_sc0010513.1_g000003 Rmu_sc0015755.1_g000002 Rmu_sc0030425.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409980 Rroxscaffold_6G00410000 Rroxscaffold_6G00410060 Rroxscaffold_6G00410080
rosa_rugosa	Rorug03G0117100 Rorug03G0117100 Rorug03G0117100 Rorug03G0117400 Rorug03G0117500 Rorug03G0117500
rosa_samantha	Rh3AG166500 Rh3AG166600 Rh3AG166700 Rh3AG167100 Rh3BG191900 Rh3BG192000 Rh3BG192100 Rh3BG192400 Rh3BG192500 Rh3BG192800 Rh3CG182200 Rh3CG182300 Rh3CG182400 Rh3CG182700 Rh3CG182800 Rh3CG183200 Rh3DG182700 Rh3DG183100 Rh3DG183200 Rh3DG183700 Rh3DG183800
rosa_wichuraiana	Rw3G015670 Rw3G015680 Rw3G015730 Rw3G015760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	312, 747
AasI	GACNNNNNNGTC	1 cut(s)	1001
Acc36I	ACCTGC	2 cut(s)	1069, 1181
AccB1I	GGYRCC	1 cut(s)	971
AccI	GTMKAC	1 cut(s)	807
AccII	CGCG	1 cut(s)	175
AciI	CCGC	3 cut(s)	41, 175, 1340
AclWI	GGATC	5 cut(s)	210, 383, 1136, 1149, 1219
AcoI	YGGCCR	2 cut(s)	441, 1183
AcsI	RAATTY	1 cut(s)	270
AcuI	CTGAAG	2 cut(s)	162, 449
AcyI	GRCGYC	4 cut(s)	60, 302, 521, 972
AfaI	GTAC	7 cut(s)	5, 179, 343, 482, 589, 800, 1290
AfeI	AGCGCT	1 cut(s)	1271
AfiI	CCNNNNNNNGG	1 cut(s)	1240
AflIII	ACRYGT	1 cut(s)	123
AgsI	TTSAA	6 cut(s)	637, 986, 1015, 1131, 1222, 1322
AhlI	ACTAGT	1 cut(s)	908
AjiI	CACGTC	1 cut(s)	46
AjnI	CCWGG	2 cut(s)	12, 391
AleI	CACNNNNGTG	1 cut(s)	161
Alw21I	GWGCWC	1 cut(s)	553
Alw26I	GTCTC	1 cut(s)	987
AlwI	GGATC	5 cut(s)	210, 383, 1136, 1149, 1219
AlwNI	CAGNNNCTG	1 cut(s)	1154
Ama87I	CYCGRG	2 cut(s)	368, 1059
Aor51HI	AGCGCT	1 cut(s)	1271
AoxI	GGCC	6 cut(s)	15, 100, 260, 379, 441, 1183
ApeKI	GCWGC	1 cut(s)	1337
ApoI	RAATTY	1 cut(s)	270
Asp700I	GAANNNNTTC	1 cut(s)	125
AspLEI	GCGC	3 cut(s)	415, 974, 1272
AspS9I	GGNCC	3 cut(s)	16, 261, 379
AsuC2I	CCSGG	1 cut(s)	1187
AsuHPI	GGTGA	3 cut(s)	199, 235, 745
AvaI	CYCGRG	2 cut(s)	368, 1059
AxyI	CCTNAGG	1 cut(s)	408
BalI	TGGCCA	1 cut(s)	443
BamHI	GGATCC	1 cut(s)	1141
BanI	GGYRCC	1 cut(s)	971
BanII	GRGCYC	2 cut(s)	369, 1330
BbsI	GAAGAC	1 cut(s)	150
Bbv12I	GWGCWC	1 cut(s)	553
BbvI	GCAGC	1 cut(s)	1324
BccI	CCATC	3 cut(s)	466, 938, 1013
BceAI	ACGGC	1 cut(s)	47
BciT130I	CCWGG	2 cut(s)	14, 393
BclI	TGATCA	4 cut(s)	661, 711, 840, 1069
BcnI	CCSGG	1 cut(s)	1187
BcoDI	GTCTC	1 cut(s)	987
BcuI	ACTAGT	1 cut(s)	908
BfaI	CTAG	2 cut(s)	863, 909
BfmI	CTRYAG	1 cut(s)	253
BfoI	RGCGCY	3 cut(s)	416, 975, 1273
BfuAI	ACCTGC	2 cut(s)	1069, 1181
BisI	GCNGC	1 cut(s)	1338
BlpI	GCTNAGC	1 cut(s)	824
BlsI	GCNGC	1 cut(s)	1339
Bme1390I	CCNGG	3 cut(s)	14, 393, 1187
BmeT110I	CYCGRG	2 cut(s)	368, 1059
BmgBI	CACGTC	1 cut(s)	46
BmgT120I	GGNCC	3 cut(s)	16, 261, 379
BmiI	GGNNCC	2 cut(s)	973, 1143
BmrFI	CCNGG	3 cut(s)	14, 393, 1187
BmrI	ACTGGG	2 cut(s)	258, 354
BmsI	GCATC	1 cut(s)	363
BmuI	ACTGGG	2 cut(s)	258, 354
BpiI	GAAGAC	1 cut(s)	150
BpmI	CTGGAG	1 cut(s)	1131
Bpu1102I	GCTNAGC	1 cut(s)	824
BpuEI	CTTGAG	1 cut(s)	312
BpuMI	CCSGG	1 cut(s)	1187
Bsa29I	ATCGAT	1 cut(s)	387
BsaBI	GATNNNNATC	2 cut(s)	207, 747
BsaHI	GRCGYC	4 cut(s)	60, 302, 521, 972
BsaJI	CCNNGG	3 cut(s)	12, 675, 728
BsaWI	WCCGGW	1 cut(s)	51
BsaXI	ACNNNNNCTCC	2 cut(s)	250, 280
Bsc4I	CCNNNNNNNGG	1 cut(s)	1240
Bse1I	ACTGG	3 cut(s)	264, 349, 554
Bse21I	CCTNAGG	1 cut(s)	408
Bse8I	GATNNNNATC	2 cut(s)	207, 747
BseBI	CCWGG	2 cut(s)	14, 393
BseCI	ATCGAT	1 cut(s)	387
BseDI	CCNNGG	3 cut(s)	12, 675, 728
BseGI	GGATG	5 cut(s)	68, 108, 378, 483, 1281
BseJI	GATNNNNATC	2 cut(s)	207, 747
BseLI	CCNNNNNNNGG	1 cut(s)	1240
BseMII	CTCAG	3 cut(s)	422, 815, 991
BseNI	ACTGG	3 cut(s)	264, 349, 554
BseRI	GAGGAG	2 cut(s)	396, 1043
BseXI	GCAGC	1 cut(s)	1324
BseYI	CCCAGC	2 cut(s)	376, 619
Bsh1236I	CGCG	1 cut(s)	175
BshFI	GGCC	6 cut(s)	17, 102, 262, 381, 443, 1185
BshNI	GGYRCC	1 cut(s)	971
BshVI	ATCGAT	1 cut(s)	387
BsiHKAI	GWGCWC	1 cut(s)	553
BsiHKCI	CYCGRG	2 cut(s)	368, 1059
BsiSI	CCGG	4 cut(s)	52, 99, 218, 1186
BslFI	GGGAC	2 cut(s)	93, 494
BslI	CCNNNNNNNGG	1 cut(s)	1240
BsmAI	GTCTC	1 cut(s)	987
BsmFI	GGGAC	2 cut(s)	93, 494
BsnI	GGCC	6 cut(s)	17, 102, 262, 381, 443, 1185
BsoBI	CYCGRG	2 cut(s)	368, 1059
Bsp1286I	GDGCHC	3 cut(s)	369, 553, 1330
Bsp1407I	TGTACA	1 cut(s)	480
Bsp1720I	GCTNAGC	1 cut(s)	824
BspACI	CCGC	3 cut(s)	41, 175, 1340
BspANI	GGCC	6 cut(s)	17, 102, 262, 381, 443, 1185
BspCNI	CTCAG	3 cut(s)	421, 816, 990
BspDI	ATCGAT	1 cut(s)	387
BspFNI	CGCG	1 cut(s)	175
BspHI	TCATGA	1 cut(s)	1254
BspLI	GGNNCC	2 cut(s)	973, 1143
BspMI	ACCTGC	2 cut(s)	1069, 1181
BspPI	GGATC	5 cut(s)	210, 383, 1136, 1149, 1219
BspQI	GCTCTTC	1 cut(s)	765
BspT107I	GGYRCC	1 cut(s)	971
BsrGI	TGTACA	1 cut(s)	480
BsrI	ACTGG	3 cut(s)	264, 349, 554
BssECI	CCNNGG	3 cut(s)	12, 675, 728
BssNI	GRCGYC	4 cut(s)	60, 302, 521, 972
Bst2UI	CCWGG	2 cut(s)	14, 393
Bst4CI	ACNGT	4 cut(s)	30, 182, 592, 1350
Bst6I	CTCTTC	2 cut(s)	765, 981
BstACI	GRCGYC	4 cut(s)	60, 302, 521, 972
BstAUI	TGTACA	1 cut(s)	480
BstC8I	GCNNGC	2 cut(s)	441, 672
BstDEI	CTNAG	4 cut(s)	408, 824, 977, 1331
BstF5I	GGATG	5 cut(s)	68, 108, 378, 483, 1281
BstFNI	CGCG	1 cut(s)	175
BstH2I	RGCGCY	3 cut(s)	416, 975, 1273
BstHHI	GCGC	3 cut(s)	415, 974, 1272
BstMAI	GTCTC	1 cut(s)	987
BstMWI	GCNNNNNNNGC	3 cut(s)	373, 410, 1334
BstNI	CCWGG	2 cut(s)	14, 393
BstNSI	RCATGY	2 cut(s)	127, 670
BstSCI	CCNGG	3 cut(s)	12, 391, 1185
BstSFI	CTRYAG	1 cut(s)	253
BstUI	CGCG	1 cut(s)	175
BstV1I	GCAGC	1 cut(s)	1324
BstV2I	GAAGAC	1 cut(s)	150
BstX2I	RGATCY	3 cut(s)	202, 1141, 1211
BstXI	CCANNNNNNTGG	1 cut(s)	439
BstYI	RGATCY	3 cut(s)	202, 1141, 1211
Bsu15I	ATCGAT	1 cut(s)	387
Bsu36I	CCTNAGG	1 cut(s)	408
BsuRI	GGCC	6 cut(s)	17, 102, 262, 381, 443, 1185
BsuTUI	ATCGAT	1 cut(s)	387
BtrI	CACGTC	1 cut(s)	46
BtsCI	GGATG	5 cut(s)	68, 108, 378, 483, 1281
BtsIMutI	CAGTG	4 cut(s)	561, 597, 985, 1312
BveI	ACCTGC	2 cut(s)	1069, 1181
Cac8I	GCNNGC	2 cut(s)	441, 672
CaiI	CAGNNNCTG	1 cut(s)	1154
CciI	TCATGA	1 cut(s)	1254
CfoI	GCGC	3 cut(s)	415, 974, 1272
Cfr13I	GGNCC	3 cut(s)	16, 261, 379
ClaI	ATCGAT	1 cut(s)	387
CseI	GACGC	3 cut(s)	68, 310, 529
Csp6I	GTAC	7 cut(s)	4, 178, 342, 481, 588, 799, 1289
CviAII	CATG	7 cut(s)	20, 124, 247, 667, 926, 968, 1255
CviQI	GTAC	7 cut(s)	4, 178, 342, 481, 588, 799, 1289
DdeI	CTNAG	4 cut(s)	408, 824, 977, 1331
DinI	GGCGCC	1 cut(s)	973
DraI	TTTAAA	1 cut(s)	762
DrdI	GACNNNNNNGTC	1 cut(s)	1001
DseDI	GACNNNNNNGTC	1 cut(s)	1001
EaeI	YGGCCR	2 cut(s)	441, 1183
Eam1104I	CTCTTC	2 cut(s)	765, 981
EarI	CTCTTC	2 cut(s)	765, 981
Eco24I	GRGCYC	2 cut(s)	369, 1330
Eco47III	AGCGCT	1 cut(s)	1271
Eco57I	CTGAAG	2 cut(s)	162, 449
Eco81I	CCTNAGG	1 cut(s)	408
Eco88I	CYCGRG	2 cut(s)	368, 1059
EcoRII	CCWGG	2 cut(s)	12, 391
EcoT38I	GRGCYC	2 cut(s)	369, 1330
EgeI	GGCGCC	1 cut(s)	973
EheI	GGCGCC	1 cut(s)	973
FaeI	CATG	7 cut(s)	23, 127, 250, 670, 929, 971, 1258
FaqI	GGGAC	2 cut(s)	93, 494
FatI	CATG	7 cut(s)	19, 123, 246, 666, 925, 967, 1254
FauI	CCCGC	1 cut(s)	1333
FbaI	TGATCA	4 cut(s)	661, 711, 840, 1069
FblI	GTMKAC	1 cut(s)	807
Fnu4HI	GCNGC	1 cut(s)	1338
FokI	GGATG	5 cut(s)	55, 95, 385, 490, 1268
FriOI	GRGCYC	2 cut(s)	369, 1330
Fsp4HI	GCNGC	1 cut(s)	1338
FspBI	CTAG	2 cut(s)	863, 909
GlaI	GCGC	3 cut(s)	414, 973, 1271
GluI	GCNGC	1 cut(s)	1338
GsaI	CCCAGC	2 cut(s)	380, 623
GsuI	CTGGAG	1 cut(s)	1131
HaeII	RGCGCY	3 cut(s)	416, 975, 1273
HaeIII	GGCC	6 cut(s)	17, 102, 262, 381, 443, 1185
HapII	CCGG	4 cut(s)	52, 99, 218, 1186
HgaI	GACGC	3 cut(s)	68, 310, 529
HhaI	GCGC	3 cut(s)	415, 974, 1272
Hin1I	GRCGYC	4 cut(s)	60, 302, 521, 972
Hin1II	CATG	7 cut(s)	23, 127, 250, 670, 929, 971, 1258
Hin6I	GCGC	3 cut(s)	413, 972, 1270
HinP1I	GCGC	3 cut(s)	413, 972, 1270
HindIII	AAGCTT	1 cut(s)	599
HinfI	GANTC	5 cut(s)	81, 146, 208, 295, 384
HpaII	CCGG	4 cut(s)	52, 99, 218, 1186
HphI	GGTGA	3 cut(s)	199, 235, 745
Hpy166II	GTNNAC	5 cut(s)	49, 244, 483, 808, 1310
Hpy188I	TCNGA	5 cut(s)	207, 300, 399, 450, 468
Hpy188III	TCNNGA	6 cut(s)	163, 370, 542, 903, 1148, 1255
Hpy8I	GTNNAC	5 cut(s)	49, 244, 483, 808, 1310
Hpy99I	CGWCG	2 cut(s)	62, 137
HpyAV	CCTTC	1 cut(s)	631
HpyCH4III	ACNGT	4 cut(s)	30, 182, 592, 1350
HpyCH4IV	ACGT	1 cut(s)	45
HpyCH4V	TGCA	4 cut(s)	420, 595, 914, 925
HpyF10VI	GCNNNNNNNGC	3 cut(s)	373, 410, 1334
HpyF3I	CTNAG	4 cut(s)	408, 824, 977, 1331
HpySE526I	ACGT	1 cut(s)	45
Hsp92I	GRCGYC	4 cut(s)	60, 302, 521, 972
Hsp92II	CATG	7 cut(s)	23, 127, 250, 670, 929, 971, 1258
HspAI	GCGC	3 cut(s)	413, 972, 1270
KasI	GGCGCC	1 cut(s)	971
Ksp22I	TGATCA	4 cut(s)	661, 711, 840, 1069
LguI	GCTCTTC	1 cut(s)	765
LmnI	GCTCC	3 cut(s)	409, 1121, 1203
Lsp1109I	GCAGC	1 cut(s)	1324
LweI	GCATC	1 cut(s)	363
MaeI	CTAG	2 cut(s)	863, 909
MaeII	ACGT	1 cut(s)	45
MaeIII	GTNAC	6 cut(s)	167, 517, 542, 556, 955, 1344
MboII	GAAGA	6 cut(s)	155, 481, 782, 998, 1097, 1119
MflI	RGATCY	3 cut(s)	202, 1141, 1211
MhlI	GDGCHC	3 cut(s)	369, 553, 1330
MlsI	TGGCCA	1 cut(s)	443
MluCI	AATT	7 cut(s)	270, 279, 632, 831, 1084, 1096, 1263
MluNI	TGGCCA	1 cut(s)	443
Mly113I	GGCGCC	1 cut(s)	972
MlyI	GAGTC	2 cut(s)	75, 140
MmeI	TCCRAC	1 cut(s)	919
Mox20I	TGGCCA	1 cut(s)	443
MroXI	GAANNNNTTC	1 cut(s)	125
MscI	TGGCCA	1 cut(s)	443
MseI	TTAA	5 cut(s)	702, 761, 1025, 1083, 1299
MslI	CAYNNNNRTG	2 cut(s)	161, 1179
Msp20I	TGGCCA	1 cut(s)	443
MspI	CCGG	4 cut(s)	52, 99, 218, 1186
MspR9I	CCNGG	3 cut(s)	14, 393, 1187
MvaI	CCWGG	2 cut(s)	14, 393
MvnI	CGCG	1 cut(s)	175
MwoI	GCNNNNNNNGC	3 cut(s)	373, 410, 1334
NarI	GGCGCC	1 cut(s)	972
NciI	CCSGG	1 cut(s)	1187
NlaIII	CATG	7 cut(s)	23, 127, 250, 670, 929, 971, 1258
NlaIV	GGNNCC	2 cut(s)	973, 1143
NmeAIII	GCCGAG	2 cut(s)	549, 700
NmuCI	GTSAC	4 cut(s)	167, 517, 542, 556
NspI	RCATGY	2 cut(s)	127, 670
OliI	CACNNNNGTG	1 cut(s)	161
PaeR7I	CTCGAG	1 cut(s)	1059
PagI	TCATGA	1 cut(s)	1254
PciI	ACATGT	1 cut(s)	123
PciSI	GCTCTTC	1 cut(s)	765
PdmI	GAANNNNTTC	1 cut(s)	125
PfeI	GAWTC	3 cut(s)	208, 295, 384
PkrI	GCNGC	1 cut(s)	1339
PleI	GAGTC	2 cut(s)	75, 140
PluTI	GGCGCC	1 cut(s)	975
PpsI	GAGTC	2 cut(s)	75, 140
PscI	ACATGT	1 cut(s)	123
PsiI	TTATAA	2 cut(s)	312, 747
Psp6I	CCWGG	2 cut(s)	12, 391
PspFI	CCCAGC	2 cut(s)	376, 619
PspGI	CCWGG	2 cut(s)	12, 391
PspN4I	GGNNCC	2 cut(s)	973, 1143
PspPI	GGNCC	3 cut(s)	16, 261, 379
PspXI	VCTCGAGB	1 cut(s)	1059
PsrI	GAACNNNNNNTAC	2 cut(s)	571, 603
PstNI	CAGNNNCTG	1 cut(s)	1154
PsuI	RGATCY	3 cut(s)	202, 1141, 1211
RsaI	GTAC	7 cut(s)	5, 179, 343, 482, 589, 800, 1290
RsaNI	GTAC	7 cut(s)	4, 178, 342, 481, 588, 799, 1289
RseI	CAYNNNNRTG	2 cut(s)	161, 1179
SapI	GCTCTTC	1 cut(s)	765
SaqAI	TTAA	5 cut(s)	702, 761, 1025, 1083, 1299
SatI	GCNGC	1 cut(s)	1338
Sau96I	GGNCC	3 cut(s)	16, 261, 379
SchI	GAGTC	2 cut(s)	75, 140
ScrFI	CCNGG	3 cut(s)	14, 393, 1187
SduI	GDGCHC	3 cut(s)	369, 553, 1330
SfaNI	GCATC	1 cut(s)	363
SfcI	CTRYAG	1 cut(s)	253
SfoI	GGCGCC	1 cut(s)	973
Sfr274I	CTCGAG	1 cut(s)	1059
SlaI	CTCGAG	1 cut(s)	1059
SmiMI	CAYNNNNRTG	2 cut(s)	161, 1179
SmlI	CTYRAG	2 cut(s)	327, 1059
SmoI	CTYRAG	2 cut(s)	327, 1059
SpeI	ACTAGT	1 cut(s)	908
Sse9I	AATT	7 cut(s)	270, 279, 632, 831, 1084, 1096, 1263
SsiI	CCGC	3 cut(s)	41, 175, 1340
SspDI	GGCGCC	1 cut(s)	971
SspI	AATATT	2 cut(s)	855, 891
SspMI	CTAG	2 cut(s)	863, 909
StyD4I	CCNGG	3 cut(s)	12, 391, 1185
TaaI	ACNGT	4 cut(s)	30, 182, 592, 1350
TaiI	ACGT	1 cut(s)	48
TaqI	TCGA	5 cut(s)	84, 132, 387, 902, 1060
TaqII	GACCGA	1 cut(s)	561
TasI	AATT	7 cut(s)	270, 279, 632, 831, 1084, 1096, 1263
TatI	WGTACW	3 cut(s)	3, 480, 798
TfiI	GAWTC	3 cut(s)	208, 295, 384
Tru1I	TTAA	5 cut(s)	702, 761, 1025, 1083, 1299
Tru9I	TTAA	5 cut(s)	702, 761, 1025, 1083, 1299
TscAI	CASTG	4 cut(s)	561, 597, 985, 1312
TseFI	GTSAC	4 cut(s)	167, 517, 542, 556
TseI	GCWGC	1 cut(s)	1337
Tsp45I	GTSAC	4 cut(s)	167, 517, 542, 556
TspDTI	ATGAA	5 cut(s)	57, 712, 720, 752, 945
TspGWI	ACGGA	1 cut(s)	1256
TspRI	CASTG	4 cut(s)	561, 597, 985, 1312
XapI	RAATTY	1 cut(s)	270
XceI	RCATGY	2 cut(s)	127, 670
XcmI	CCANNNNNNNNNTGG	2 cut(s)	436, 451
XhoI	CTCGAG	1 cut(s)	1059
XmiI	GTMKAC	1 cut(s)	807
XmnI	GAANNNNTTC	1 cut(s)	125
XspI	CTAG	2 cut(s)	863, 909

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.