Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001022

Physical Location & Seq

Genomic Coordinates Reverse (-)

9512465 .. 9516771

Gene Structure 4307 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0117100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1119 bp

ATGACTTTGATTCTGGGAGTGTACGGGTCTGAGACCTTAGAGCTTGGCCCTAATACTTCGACTCTTCTGCAACCTAACTCCATATTTGTGCAGTCTATAAAGGTGGAAGAGCTGAATGTATCAAACCCTGGGCCTGTGCTATATGGTTTCTATAGTGTTCCACCGCTTAATATTGTGACGACTTGGTCTGAAACACACAGTGCCTCTGTTCCAGCTGATTCTCATAAGGAGTGGATATATTACCTAAATAAGGGGTCTCAAATAAGTATATCATACAGCGTTTCCTCTCCCAGCACGTCTATTTTTCTTATAATTGCTGAAGGTAGAGAAGGCCTTGCTCAGTGGCTTGAAGAGCCAACATATCCTAATACTACATTGTCATGGAACCTCGTTCATGGAAGTGGCAAGATTCAGCAGGACATATCAACGTCTGATAATTACTATATTTCTGTGGGTAACCTGAACTATGAGGATGTGGAGGTGCAATTAAACTTCACAGTGAATGCTTTGTTGTATGATACAAGTGAAGCTTATTACAAGTGTACCTTCACAAATACGTCCTGCAGTTTGAAAATTTTGTTTCCCAGTGGAAATGTTGGTGTGCTAACATCTCCTGGTCCAGATCAGGGTATATACAACCAGTATGTAAAACTGTCATATGGACCAAGATGGGCCACATATATTATTGGTATAGGAGCGATGACTATACTTATGTTATTGGCCTTCAACTTCTTGAACAAGTTCCGCTGTAACAATGAAGATGGAATAAGAGTACAGCATGAGGAGTTCAGACCAGAAAGAGCCCCGTTGCTTTCATACAAAGATGATGATCAATCAAGTTGGGGTTCATCTTATGATTCTGCCTCGAACGATGAGGGGGATCTTGAAGAACTTATGGCAGCAGGTTCTCTTGATGGAAAGTCACTTAGAGATGGTGAAAGTAACAATACTCGTCGGCTTTGTGCAATTTGTTTTGATGCTCCTAGGGACTGCTTTTTCCTCCCATGCGGGCACTGTGTGGCTTGTTTTGAATGCGCAACAAGGATAGCGGAAGCTGCTGCTACTTGTCCAATTTGTCGGAGGAACATAAAGAAGGTGAGGAAGATTTTTACAGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005730 GO:0005737 GO:0005886 GO:0006139 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0008026 GO:0008104 GO:0008150 GO:0008152 GO:0008186 GO:0009266 GO:0009408 GO:0009409 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0010501 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0016973 GO:0017111 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033993 GO:0034613 GO:0034641 GO:0042221 GO:0042623 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070035 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0090304 GO:0097305 GO:0140098 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

372

Amino Acids

41.28

Weight (kDa)

4.89

Isoelectric Point (pI)

42.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
APD1-4_N	PF16040	44 - 112	4.7e-25	E3 ubiquitin-protein ligase APD1-4, N-terminal
APD1-4_M	PF16041	136 - 240	1.9e-33	E3 ubiquitin-protein ligase APD1-4, middle domain
zf-C3HC4_3	PF13920	318 - 366	3.3e-14	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	320 - 360	1.7e-06	Ring finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001022)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53110
fragaria_vesca	FvH4_6g17230 FvH4_6g17230 FvH4_6g17230 FvH4_6g17280 FvH4_6g17280
malus_domestica	MD12G1102600.v1.1 MD14G1096800.v1.1
prunus_persica	Prupe.3G009100_v2.0.a1 Prupe.7G122600_v2.0.a1
pyrus_communis	pycom03g08760 pycom12g10060 pycom14g09450
rosa_chinensis	RchiOBHm_Chr3g0471311 RchiOBHm_Chr3g0471321 RchiOBHm_Chr3g0471361 RchiOBHm_Chr3g0471391
rosa_laevigata	RLG00000024181 RLG00000024187 RLG00000024188
rosa_multiflora	Rmu_sc0006582.1_g000015 Rmu_sc0006582.1_g000018 Rmu_sc0009082.1_g000003 Rmu_sc0010513.1_g000003 Rmu_sc0015755.1_g000002 Rmu_sc0030425.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409980 Rroxscaffold_6G00410000 Rroxscaffold_6G00410060 Rroxscaffold_6G00410080
rosa_rugosa	Rorug03G0117100 Rorug03G0117100 Rorug03G0117100 Rorug03G0117400 Rorug03G0117500 Rorug03G0117500
rosa_samantha	Rh3AG166500 Rh3AG166600 Rh3AG166700 Rh3AG167100 Rh3BG191900 Rh3BG192000 Rh3BG192100 Rh3BG192400 Rh3BG192500 Rh3BG192800 Rh3CG182200 Rh3CG182300 Rh3CG182400 Rh3CG182700 Rh3CG182800 Rh3CG183200 Rh3DG182700 Rh3DG183100 Rh3DG183200 Rh3DG183700 Rh3DG183800
rosa_wichuraiana	Rw3G015670 Rw3G015680 Rw3G015730 Rw3G015760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	311
AasI	GACNNNNNNGTC	1 cut(s)	184
Acc16I	TGCGCA	1 cut(s)	1036
Acc36I	ACCTGC	1 cut(s)	893
AciI	CCGC	4 cut(s)	164, 745, 1008, 1049
AclWI	GGATC	1 cut(s)	888
AcsI	RAATTY	1 cut(s)	573
AcuI	CTGAAG	1 cut(s)	339
AdeI	CACNNNGTG	2 cut(s)	200, 1018
AfaI	GTAC	3 cut(s)	23, 544, 774
AfiI	CCNNNNNNNGG	2 cut(s)	250, 626
AgsI	TTSAA	6 cut(s)	350, 571, 727, 736, 887, 1031
AjiI	CACGTC	1 cut(s)	297
AjnI	CCWGG	2 cut(s)	127, 613
AluBI	AGCT	5 cut(s)	43, 112, 215, 530, 1055
AluI	AGCT	5 cut(s)	43, 112, 215, 530, 1055
Alw26I	GTCTC	2 cut(s)	26, 261
AlwI	GGATC	1 cut(s)	888
AoxI	GGCC	5 cut(s)	46, 131, 331, 672, 720
ApeKI	GCWGC	3 cut(s)	899, 1055, 1058
ApoI	RAATTY	1 cut(s)	573
Asp700I	GAANNNNTTC	1 cut(s)	740
AspA2I	CCTAGG	1 cut(s)	983
AspLEI	GCGC	1 cut(s)	1037
AspS9I	GGNCC	5 cut(s)	47, 131, 617, 662, 672
AsuHPI	GGTGA	2 cut(s)	947, 1108
AvaII	GGWCC	2 cut(s)	617, 662
AvrII	CCTAGG	1 cut(s)	983
BaeGI	GKGCMC	1 cut(s)	1014
BaeI	ACNNNNGTAYC	2 cut(s)	526, 559
BanII	GRGCYC	1 cut(s)	805
BbvI	GCAGC	3 cut(s)	911, 1042, 1045
BccI	CCATC	4 cut(s)	663, 755, 908, 926
BcgI	CGANNNNNNTGC	2 cut(s)	49, 83
BciT130I	CCWGG	2 cut(s)	129, 615
BclI	TGATCA	1 cut(s)	829
BcoDI	GTCTC	2 cut(s)	26, 261
BfaI	CTAG	1 cut(s)	984
BfmI	CTRYAG	2 cut(s)	151, 562
BfuAI	ACCTGC	1 cut(s)	893
BisI	GCNGC	3 cut(s)	900, 1056, 1059
BlnI	CCTAGG	1 cut(s)	983
BlsI	GCNGC	3 cut(s)	901, 1057, 1060
Bme1390I	CCNGG	2 cut(s)	129, 615
Bme18I	GGWCC	2 cut(s)	617, 662
BmgBI	CACGTC	1 cut(s)	297
BmgT120I	GGNCC	5 cut(s)	47, 131, 617, 662, 672
BmiI	GGNNCC	1 cut(s)	386
BmrFI	CCNGG	2 cut(s)	129, 615
BmrI	ACTGGG	1 cut(s)	579
BmsI	GCATC	1 cut(s)	967
BmuI	ACTGGG	1 cut(s)	579
BsaBI	GATNNNNATC	1 cut(s)	828
BsaI	GGTCTC	2 cut(s)	26, 261
BsaJI	CCNNGG	3 cut(s)	127, 128, 983
Bsc4I	CCNNNNNNNGG	2 cut(s)	250, 626
Bse1I	ACTGG	2 cut(s)	585, 640
Bse8I	GATNNNNATC	1 cut(s)	828
BseBI	CCWGG	2 cut(s)	129, 615
BseDI	CCNNGG	3 cut(s)	127, 128, 983
BseGI	GGATG	1 cut(s)	478
BseJI	GATNNNNATC	1 cut(s)	828
BseLI	CCNNNNNNNGG	2 cut(s)	250, 626
BseMII	CTCAG	2 cut(s)	21, 353
BseNI	ACTGG	2 cut(s)	585, 640
BseRI	GAGGAG	1 cut(s)	797
BseSI	GKGCMC	1 cut(s)	1014
BseXI	GCAGC	3 cut(s)	911, 1042, 1045
BseYI	CCCAGC	1 cut(s)	290
BsgI	GTGCAG	1 cut(s)	110
BshFI	GGCC	5 cut(s)	48, 133, 333, 674, 722
BslFI	GGGAC	1 cut(s)	1001
BslI	CCNNNNNNNGG	2 cut(s)	250, 626
BsmAI	GTCTC	2 cut(s)	26, 261
BsmFI	GGGAC	1 cut(s)	1001
BsmI	GAATGC	2 cut(s)	508, 1037
BsnI	GGCC	5 cut(s)	48, 133, 333, 674, 722
Bso31I	GGTCTC	2 cut(s)	26, 261
Bsp1286I	GDGCHC	2 cut(s)	805, 1014
Bsp143I	GATC	3 cut(s)	622, 829, 880
BspACI	CCGC	4 cut(s)	164, 745, 1008, 1049
BspANI	GGCC	5 cut(s)	48, 133, 333, 674, 722
BspCNI	CTCAG	2 cut(s)	22, 352
BspLI	GGNNCC	1 cut(s)	386
BspMAI	CTGCAG	1 cut(s)	566
BspMI	ACCTGC	1 cut(s)	893
BspPI	GGATC	1 cut(s)	888
BspQI	GCTCTTC	2 cut(s)	102, 345
BspTNI	GGTCTC	2 cut(s)	26, 261
BsrI	ACTGG	2 cut(s)	585, 640
BssECI	CCNNGG	3 cut(s)	127, 128, 983
BssMI	GATC	3 cut(s)	622, 829, 880
BssT1I	CCWWGG	1 cut(s)	983
Bst2UI	CCWGG	2 cut(s)	129, 615
Bst4CI	ACNGT	5 cut(s)	200, 499, 654, 1016, 1114
Bst6I	CTCTTC	3 cut(s)	69, 102, 345
BstC8I	GCNNGC	1 cut(s)	1010
BstDEI	CTNAG	4 cut(s)	30, 37, 339, 926
BstEII	GGTNACC	1 cut(s)	455
BstENI	CCTNNNNNAGG	1 cut(s)	248
BstF5I	GGATG	1 cut(s)	478
BstHHI	GCGC	1 cut(s)	1037
BstKTI	GATC	3 cut(s)	625, 832, 883
BstMAI	GTCTC	2 cut(s)	26, 261
BstMBI	GATC	3 cut(s)	622, 829, 880
BstMWI	GCNNNNNNNGC	2 cut(s)	352, 1055
BstNI	CCWGG	2 cut(s)	129, 615
BstPI	GGTNACC	1 cut(s)	455
BstSCI	CCNGG	2 cut(s)	127, 613
BstSFI	CTRYAG	2 cut(s)	151, 562
BstSLI	GKGCMC	1 cut(s)	1014
BstV1I	GCAGC	3 cut(s)	911, 1042, 1045
BstX2I	RGATCY	1 cut(s)	880
BstYI	RGATCY	1 cut(s)	880
BsuRI	GGCC	5 cut(s)	48, 133, 333, 674, 722
BtgZI	GCGATG	1 cut(s)	713
BtrI	CACGTC	1 cut(s)	297
BtsCI	GGATG	1 cut(s)	478
BtsIMutI	CAGTG	5 cut(s)	205, 347, 504, 592, 1012
BveI	ACCTGC	1 cut(s)	893
Cac8I	GCNNGC	1 cut(s)	1010
CfoI	GCGC	1 cut(s)	1037
Cfr13I	GGNCC	5 cut(s)	47, 131, 617, 662, 672
Csp6I	GTAC	3 cut(s)	22, 543, 773
CviAII	CATG	4 cut(s)	381, 395, 779, 1005
CviQI	GTAC	3 cut(s)	22, 543, 773
DdeI	CTNAG	4 cut(s)	30, 37, 339, 926
DpnI	GATC	3 cut(s)	624, 831, 882
DpnII	GATC	3 cut(s)	622, 829, 880
DraIII	CACNNNGTG	2 cut(s)	200, 1018
DrdI	GACNNNNNNGTC	1 cut(s)	184
DseDI	GACNNNNNNGTC	1 cut(s)	184
Eam1104I	CTCTTC	3 cut(s)	69, 102, 345
EarI	CTCTTC	3 cut(s)	69, 102, 345
Eco130I	CCWWGG	1 cut(s)	983
Eco147I	AGGCCT	1 cut(s)	333
Eco24I	GRGCYC	1 cut(s)	805
Eco31I	GGTCTC	2 cut(s)	26, 261
Eco47I	GGWCC	2 cut(s)	617, 662
Eco57I	CTGAAG	1 cut(s)	339
Eco91I	GGTNACC	1 cut(s)	455
EcoNI	CCTNNNNNAGG	1 cut(s)	248
EcoO65I	GGTNACC	1 cut(s)	455
EcoRII	CCWGG	2 cut(s)	127, 613
EcoT14I	CCWWGG	1 cut(s)	983
EcoT38I	GRGCYC	1 cut(s)	805
ErhI	CCWWGG	1 cut(s)	983
FaeI	CATG	4 cut(s)	384, 398, 782, 1008
FalI	AAGNNNNNCTT	4 cut(s)	514, 546, 530, 562
FaqI	GGGAC	1 cut(s)	1001
FatI	CATG	4 cut(s)	380, 394, 778, 1004
FauI	CCCGC	1 cut(s)	1001
FauNDI	CATATG	1 cut(s)	658
FbaI	TGATCA	1 cut(s)	829
Fnu4HI	GCNGC	3 cut(s)	900, 1056, 1059
FokI	GGATG	1 cut(s)	485
FriOI	GRGCYC	1 cut(s)	805
Fsp4HI	GCNGC	3 cut(s)	900, 1056, 1059
FspBI	CTAG	1 cut(s)	984
FspI	TGCGCA	1 cut(s)	1036
GlaI	GCGC	1 cut(s)	1036
GluI	GCNGC	3 cut(s)	900, 1056, 1059
GsaI	CCCAGC	1 cut(s)	294
HaeIII	GGCC	5 cut(s)	48, 133, 333, 674, 722
HhaI	GCGC	1 cut(s)	1037
Hin1II	CATG	4 cut(s)	384, 398, 782, 1008
Hin6I	GCGC	1 cut(s)	1035
HinP1I	GCGC	1 cut(s)	1035
HindIII	AAGCTT	1 cut(s)	528
HinfI	GANTC	5 cut(s)	10, 61, 218, 409, 857
HphI	GGTGA	2 cut(s)	947, 1108
Hpy166II	GTNNAC	2 cut(s)	22, 543
Hpy188I	TCNGA	5 cut(s)	31, 190, 433, 791, 1080
Hpy188III	TCNNGA	4 cut(s)	620, 733, 884, 911
Hpy8I	GTNNAC	2 cut(s)	22, 543
Hpy99I	CGWCG	1 cut(s)	957
HpyAV	CCTTC	5 cut(s)	314, 323, 556, 733, 1087
HpyCH4III	ACNGT	5 cut(s)	200, 499, 654, 1016, 1114
HpyCH4IV	ACGT	3 cut(s)	296, 428, 557
HpyCH4V	TGCA	5 cut(s)	70, 91, 484, 564, 965
HpyF10VI	GCNNNNNNNGC	2 cut(s)	352, 1055
HpyF3I	CTNAG	4 cut(s)	30, 37, 339, 926
HpySE526I	ACGT	3 cut(s)	296, 428, 557
Hsp92II	CATG	4 cut(s)	384, 398, 782, 1008
HspAI	GCGC	1 cut(s)	1035
Ksp22I	TGATCA	1 cut(s)	829
Kzo9I	GATC	3 cut(s)	622, 829, 880
LguI	GCTCTTC	2 cut(s)	102, 345
LmnI	GCTCC	2 cut(s)	695, 985
Lsp1109I	GCAGC	3 cut(s)	911, 1042, 1045
LweI	GCATC	1 cut(s)	967
MaeI	CTAG	1 cut(s)	984
MaeII	ACGT	3 cut(s)	296, 428, 557
MaeIII	GTNAC	5 cut(s)	175, 455, 749, 921, 941
MalI	GATC	3 cut(s)	624, 831, 882
MboI	GATC	3 cut(s)	622, 829, 880
MboII	GAAGA	6 cut(s)	56, 119, 362, 770, 899, 1114
MflI	RGATCY	1 cut(s)	880
MhlI	GDGCHC	2 cut(s)	805, 1014
MluCI	AATT	6 cut(s)	312, 436, 485, 573, 966, 1071
MlyI	GAGTC	1 cut(s)	55
MmeI	TCCRAC	1 cut(s)	1058
MroXI	GAANNNNTTC	1 cut(s)	740
MseI	TTAA	2 cut(s)	168, 488
MslI	CAYNNNNRTG	3 cut(s)	86, 379, 399
MspA1I	CMGCKG	2 cut(s)	215, 747
MspR9I	CCNGG	2 cut(s)	129, 615
Mva1269I	GAATGC	2 cut(s)	508, 1037
MvaI	CCWGG	2 cut(s)	129, 615
MwoI	GCNNNNNNNGC	2 cut(s)	352, 1055
NdeI	CATATG	1 cut(s)	658
NdeII	GATC	3 cut(s)	622, 829, 880
NlaIII	CATG	4 cut(s)	384, 398, 782, 1008
NlaIV	GGNNCC	1 cut(s)	386
NmuCI	GTSAC	2 cut(s)	175, 921
NsbI	TGCGCA	1 cut(s)	1036
PasI	CCCWGGG	1 cut(s)	128
PceI	AGGCCT	1 cut(s)	333
PciSI	GCTCTTC	2 cut(s)	102, 345
PctI	GAATGC	2 cut(s)	508, 1037
PdmI	GAANNNNTTC	1 cut(s)	740
PfeI	GAWTC	4 cut(s)	10, 218, 409, 857
PflFI	GACNNNGTC	1 cut(s)	184
PkrI	GCNGC	3 cut(s)	901, 1057, 1060
PleI	GAGTC	1 cut(s)	55
PpsI	GAGTC	1 cut(s)	55
PsiI	TTATAA	1 cut(s)	311
Psp6I	CCWGG	2 cut(s)	127, 613
PspEI	GGTNACC	1 cut(s)	455
PspFI	CCCAGC	1 cut(s)	290
PspGI	CCWGG	2 cut(s)	127, 613
PspN4I	GGNNCC	1 cut(s)	386
PspPI	GGNCC	5 cut(s)	47, 131, 617, 662, 672
PstI	CTGCAG	1 cut(s)	566
PsuI	RGATCY	1 cut(s)	880
PsyI	GACNNNGTC	1 cut(s)	184
PvuII	CAGCTG	1 cut(s)	215
RsaI	GTAC	3 cut(s)	23, 544, 774
RsaNI	GTAC	3 cut(s)	22, 543, 773
RseI	CAYNNNNRTG	3 cut(s)	86, 379, 399
SapI	GCTCTTC	2 cut(s)	102, 345
SaqAI	TTAA	2 cut(s)	168, 488
SatI	GCNGC	3 cut(s)	900, 1056, 1059
Sau3AI	GATC	3 cut(s)	622, 829, 880
Sau96I	GGNCC	5 cut(s)	47, 131, 617, 662, 672
SchI	GAGTC	1 cut(s)	55
ScrFI	CCNGG	2 cut(s)	129, 615
SduI	GDGCHC	2 cut(s)	805, 1014
SfaNI	GCATC	1 cut(s)	967
SfcI	CTRYAG	2 cut(s)	151, 562
SinI	GGWCC	2 cut(s)	617, 662
SmiMI	CAYNNNNRTG	3 cut(s)	86, 379, 399
Sse9I	AATT	6 cut(s)	312, 436, 485, 573, 966, 1071
SseBI	AGGCCT	1 cut(s)	333
SsiI	CCGC	4 cut(s)	164, 745, 1008, 1049
SspI	AATATT	1 cut(s)	172
SspMI	CTAG	1 cut(s)	984
StuI	AGGCCT	1 cut(s)	333
StyD4I	CCNGG	2 cut(s)	127, 613
StyI	CCWWGG	1 cut(s)	983
TaaI	ACNGT	5 cut(s)	200, 499, 654, 1016, 1114
TaiI	ACGT	3 cut(s)	299, 431, 560
TaqI	TCGA	2 cut(s)	59, 866
TasI	AATT	6 cut(s)	312, 436, 485, 573, 966, 1071
TatI	WGTACW	1 cut(s)	772
TfiI	GAWTC	4 cut(s)	10, 218, 409, 857
Tru1I	TTAA	2 cut(s)	168, 488
Tru9I	TTAA	2 cut(s)	168, 488
TscAI	CASTG	5 cut(s)	205, 347, 504, 592, 1019
TseFI	GTSAC	2 cut(s)	175, 921
TseI	GCWGC	3 cut(s)	899, 1055, 1058
Tsp45I	GTSAC	2 cut(s)	175, 921
TspDTI	ATGAA	4 cut(s)	383, 771, 804, 837
TspRI	CASTG	5 cut(s)	205, 347, 504, 592, 1019
Tth111I	GACNNNGTC	1 cut(s)	184
VpaK11BI	GGWCC	2 cut(s)	617, 662
XagI	CCTNNNNNAGG	1 cut(s)	248
XapI	RAATTY	1 cut(s)	573
XmaJI	CCTAGG	1 cut(s)	983
XmnI	GAANNNNTTC	1 cut(s)	740
XspI	CTAG	1 cut(s)	984

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.