Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0001022

Physical Location & Seq

Genomic Coordinates Reverse (-)

11191784 .. 11195206

Gene Structure 3423 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g17230.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGTACACCACCCTCGCCCACGCCAAGCAGTTTCTTATTCCGCACCCAAACGACGCCGTTTCGTCCCCTCTCGGCCTCGATCTCAACTTTTCCGGCCTCAACATCCACCGCGAGAACATGTTCCTCGACGACCCTGAAGCAGACTTCAACATCACAACCGTGAGTGACACGCGCTACAGTTCGGTGAGGAGTTTTGACGATCTGAATCTGTCGCCGGAGGTGTTGAGGGCTTTGTATGCGGACATGGGATACAGGAGGCCCAGTAAAATTCAGGCAAATACTCTGCCGATGATTTTGAGTCCTCCTTATAAGGATTTGGTTGCTCAAGCACACAATGGTACTGGCAAAACTACTTGTTTCGGGCTCGGAATGCTTGGCCGTATCGATCCCGGTGTTAAAGCTCCTCAGGCACTCTGCATTTGCCCCACCAGAGAGCTGGCCATTCAGATATTGGAGGTGCTTCAGAGGATGGGGATGTACACAGGAATTAATATAGAGTGTGCTGTCCCATGTGTGACGCCGAGTGCTACATCTGTTCATGACCGGGCACCAGTAACGGCACATATTGTGATTGGAACTTCTGGTACGGTGCATAAGCTTATTTCGTACAAGAAGCTGGGTGTAAGCAAGTTGAAGGTTCTTGTTTTTGATGAGGCTGATCACATGCTTGCCGAGGATGGCTTTAGAGATGATTCCTTAAGGATAAAGAAGGAGATAGATAAATTTAGCCCTCATTGCCAGGTGCTTTTGTTTTCTGCTACATTTAATGAAATGATCACAAAGTTCATACCGAGGGTGATGAAAGATTATAATCAACTAACTTTAAAGAAAGAAGAGCTTTCTTTGGAAGCTGTGAAGCAGTACAAAGTTTACTGTCCTGATGAGCTGGATAAAATTGAGGTGATCAGGTCTAAGATATTTGACCTAGGAGATTACATTGGACAGACAATAATATTTGTACGGTCAAGAAATAGTGCCAAAATGCTGCATGAAGAACTTGTTCGAGATGGTCATTCGGTTACTACCGTACATGGTGCCCTCAGCATTGAAGACAGAGACAAAATAGTCAAAGAGTTCAAAGATGGTTTAACCAAAGTTCTCATATCAACTGATCTCCTCGCTCGAGGTTTTGATCAACAGCAGGTTAATTGTGTTGTCAATTATGATCTTCCAATCAAGCGTGTTGCTTCTTCAAGCACACGGGATACTCCAGAGCCTGATTATGAGCTCTACTTGCATAGATGTGGCCGGGCAGGTCGTTTTGGGAGCAAGGGAGCTGTGTTTAACTTGCTTTGCCTTGATACGGATAAGCTGGTCATGGCTAATATCGAGCGCTACTATAACATCCAAGTACCAGAGGTTATGAACAGTGAACGGGCTTTTCAAGGGGCTCTAAGAGCTGCGGGGTTACTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005730 GO:0005737 GO:0005886 GO:0006139 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0008026 GO:0008104 GO:0008150 GO:0008152 GO:0008186 GO:0009266 GO:0009408 GO:0009409 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0010501 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0016973 GO:0017111 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033993 GO:0034613 GO:0034641 GO:0042221 GO:0042623 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070035 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0090304 GO:0097305 GO:0140098 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

472

Amino Acids

52.72

Weight (kDa)

6.68

Isoelectric Point (pI)

38.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	89 - 259	2.9e-34	DEAD/DEAH box helicase
ResIII	PF04851	105 - 256	5.9e-07	Type III restriction enzyme, res subunit
Helicase_C	PF00271	306 - 422	5.6e-25	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001022)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53110
fragaria_vesca	FvH4_6g17230 FvH4_6g17230 FvH4_6g17230 FvH4_6g17280 FvH4_6g17280
malus_domestica	MD12G1102600.v1.1 MD14G1096800.v1.1
prunus_persica	Prupe.3G009100_v2.0.a1 Prupe.7G122600_v2.0.a1
pyrus_communis	pycom03g08760 pycom12g10060 pycom14g09450
rosa_chinensis	RchiOBHm_Chr3g0471311 RchiOBHm_Chr3g0471321 RchiOBHm_Chr3g0471361 RchiOBHm_Chr3g0471391
rosa_laevigata	RLG00000024181 RLG00000024187 RLG00000024188
rosa_multiflora	Rmu_sc0006582.1_g000015 Rmu_sc0006582.1_g000018 Rmu_sc0009082.1_g000003 Rmu_sc0010513.1_g000003 Rmu_sc0015755.1_g000002 Rmu_sc0030425.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409980 Rroxscaffold_6G00410000 Rroxscaffold_6G00410060 Rroxscaffold_6G00410080
rosa_rugosa	Rorug03G0117100 Rorug03G0117100 Rorug03G0117100 Rorug03G0117400 Rorug03G0117500 Rorug03G0117500
rosa_samantha	Rh3AG166500 Rh3AG166600 Rh3AG166700 Rh3AG167100 Rh3BG191900 Rh3BG192000 Rh3BG192100 Rh3BG192400 Rh3BG192500 Rh3BG192800 Rh3CG182200 Rh3CG182300 Rh3CG182400 Rh3CG182700 Rh3CG182800 Rh3CG183200 Rh3DG182700 Rh3DG183100 Rh3DG183200 Rh3DG183700 Rh3DG183800
rosa_wichuraiana	Rw3G015670 Rw3G015680 Rw3G015730 Rw3G015760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	309, 810
AasI	GACNNNNNNGTC	1 cut(s)	1064
Acc36I	ACCTGC	2 cut(s)	1132, 1244
AccB1I	GGYRCC	2 cut(s)	547, 1034
AccII	CGCG	2 cut(s)	111, 172
AciI	CCGC	4 cut(s)	41, 109, 239, 1403
AclWI	GGATC	1 cut(s)	380
AcoI	YGGCCR	3 cut(s)	376, 438, 1246
AcsI	RAATTY	2 cut(s)	267, 722
AcuI	CTGAAG	2 cut(s)	156, 446
AcyI	GRCGYC	2 cut(s)	54, 518
AfaI	GTAC	9 cut(s)	5, 340, 479, 586, 608, 863, 960, 1029, 1353
AfeI	AGCGCT	1 cut(s)	1334
AfiI	CCNNNNNNNGG	1 cut(s)	1303
AflII	CTTAAG	1 cut(s)	697
AflIII	ACRYGT	1 cut(s)	117
AgsI	TTSAA	6 cut(s)	148, 634, 1049, 1078, 1194, 1385
AjnI	CCWGG	1 cut(s)	738
AleI	CACNNNNGTG	1 cut(s)	158
Alw21I	GWGCWC	1 cut(s)	1230
Alw26I	GTCTC	1 cut(s)	1050
AlwI	GGATC	1 cut(s)	380
AlwNI	CAGNNNCTG	1 cut(s)	1217
Ama87I	CYCGRG	1 cut(s)	1122
Aor51HI	AGCGCT	1 cut(s)	1334
AoxI	GGCC	6 cut(s)	73, 94, 257, 376, 438, 1246
ApeKI	GCWGC	2 cut(s)	985, 1400
ApoI	RAATTY	2 cut(s)	267, 722
AseI	ATTAAT	1 cut(s)	489
Asp700I	GAANNNNTTC	2 cut(s)	119, 999
AspA2I	CCTAGG	1 cut(s)	925
AspLEI	GCGC	2 cut(s)	174, 1335
AspS9I	GGNCC	1 cut(s)	258
AsuC2I	CCSGG	3 cut(s)	390, 545, 1250
AsuHPI	GGTGA	3 cut(s)	196, 808, 913
AvaI	CYCGRG	1 cut(s)	1122
AvrII	CCTAGG	1 cut(s)	925
AxyI	CCTNAGG	1 cut(s)	405
BaeGI	GKGCMC	2 cut(s)	550, 1039
BalI	TGGCCA	1 cut(s)	440
BanI	GGYRCC	2 cut(s)	547, 1034
BanII	GRGCYC	3 cut(s)	366, 1230, 1393
BbsI	GAAGAC	1 cut(s)	1056
Bbv12I	GWGCWC	1 cut(s)	1230
BbvCI	CCTCAGC	1 cut(s)	1040
BbvI	GCAGC	2 cut(s)	972, 1387
BccI	CCATC	4 cut(s)	463, 671, 1001, 1076
BceAI	ACGGC	3 cut(s)	41, 363, 573
BciT130I	CCWGG	1 cut(s)	740
BciVI	GTATCC	2 cut(s)	242, 1198
BclI	TGATCA	4 cut(s)	658, 774, 903, 1132
BcnI	CCSGG	3 cut(s)	390, 545, 1250
BcoDI	GTCTC	1 cut(s)	1050
BfaI	CTAG	1 cut(s)	926
BfmI	CTRYAG	1 cut(s)	175
BfoI	RGCGCY	1 cut(s)	1336
BfrI	CTTAAG	1 cut(s)	697
BfuAI	ACCTGC	2 cut(s)	1132, 1244
BfuI	GTATCC	2 cut(s)	242, 1198
BisI	GCNGC	2 cut(s)	986, 1401
BlnI	CCTAGG	1 cut(s)	925
BlsI	GCNGC	2 cut(s)	987, 1402
Bme1390I	CCNGG	4 cut(s)	390, 545, 740, 1250
BmeT110I	CYCGRG	1 cut(s)	1122
BmgT120I	GGNCC	1 cut(s)	258
BmiI	GGNNCC	2 cut(s)	549, 1036
BmrFI	CCNGG	4 cut(s)	390, 545, 740, 1250
BmrI	ACTGGG	1 cut(s)	255
BmuI	ACTGGG	1 cut(s)	255
BpiI	GAAGAC	1 cut(s)	1056
BpmI	CTGGAG	1 cut(s)	1194
Bpu10I	CCTNAGC	1 cut(s)	1040
BpuEI	CTTGAG	1 cut(s)	309
BpuMI	CCSGG	3 cut(s)	390, 545, 1250
Bsa29I	ATCGAT	1 cut(s)	384
BsaBI	GATNNNNATC	2 cut(s)	204, 810
BsaHI	GRCGYC	2 cut(s)	54, 518
BsaJI	CCNNGG	3 cut(s)	672, 791, 925
BsaXI	ACNNNNNCTCC	2 cut(s)	247, 277
Bsc4I	CCNNNNNNNGG	1 cut(s)	1303
Bse1I	ACTGG	3 cut(s)	261, 346, 551
Bse21I	CCTNAGG	1 cut(s)	405
Bse3DI	GCAATG	1 cut(s)	733
Bse8I	GATNNNNATC	2 cut(s)	204, 810
BseBI	CCWGG	1 cut(s)	740
BseCI	ATCGAT	1 cut(s)	384
BseDI	CCNNGG	3 cut(s)	672, 791, 925
BseGI	GGATG	5 cut(s)	102, 474, 480, 682, 1344
BseJI	GATNNNNATC	2 cut(s)	204, 810
BseLI	CCNNNNNNNGG	1 cut(s)	1303
BseMI	GCAATG	1 cut(s)	733
BseMII	CTCAG	2 cut(s)	419, 1054
BseNI	ACTGG	3 cut(s)	261, 346, 551
BseRI	GAGGAG	3 cut(s)	202, 393, 1106
BseSI	GKGCMC	2 cut(s)	550, 1039
BseXI	GCAGC	2 cut(s)	972, 1387
BseYI	CCCAGC	1 cut(s)	616
Bsh1236I	CGCG	2 cut(s)	111, 172
BshFI	GGCC	6 cut(s)	75, 96, 259, 378, 440, 1248
BshNI	GGYRCC	2 cut(s)	547, 1034
BshVI	ATCGAT	1 cut(s)	384
BsiHKAI	GWGCWC	1 cut(s)	1230
BsiHKCI	CYCGRG	1 cut(s)	1122
BsiSI	CCGG	5 cut(s)	93, 215, 390, 544, 1249
BslFI	GGGAC	2 cut(s)	49, 491
BslI	CCNNNNNNNGG	1 cut(s)	1303
BsmAI	GTCTC	1 cut(s)	1050
BsmFI	GGGAC	2 cut(s)	49, 491
BsmI	GAATGC	1 cut(s)	375
BsnI	GGCC	6 cut(s)	75, 96, 259, 378, 440, 1248
BsoBI	CYCGRG	1 cut(s)	1122
Bsp1286I	GDGCHC	5 cut(s)	366, 550, 1039, 1230, 1393
Bsp1407I	TGTACA	2 cut(s)	3, 477
Bsp143I	GATC	9 cut(s)	79, 199, 385, 658, 774, 903, 1111, 1132, 1165
BspACI	CCGC	4 cut(s)	41, 109, 239, 1403
BspANI	GGCC	6 cut(s)	75, 96, 259, 378, 440, 1248
BspCNI	CTCAG	2 cut(s)	418, 1053
BspDI	ATCGAT	1 cut(s)	384
BspFNI	CGCG	2 cut(s)	111, 172
BspHI	TCATGA	1 cut(s)	538
BspLI	GGNNCC	2 cut(s)	549, 1036
BspMI	ACCTGC	2 cut(s)	1132, 1244
BspPI	GGATC	1 cut(s)	380
BspQI	GCTCTTC	1 cut(s)	828
BspT107I	GGYRCC	2 cut(s)	547, 1034
BspTI	CTTAAG	1 cut(s)	697
BsrDI	GCAATG	1 cut(s)	733
BsrGI	TGTACA	2 cut(s)	3, 477
BsrI	ACTGG	3 cut(s)	261, 346, 551
BssECI	CCNNGG	3 cut(s)	672, 791, 925
BssMI	GATC	9 cut(s)	79, 199, 385, 658, 774, 903, 1111, 1132, 1165
BssNI	GRCGYC	2 cut(s)	54, 518
BssT1I	CCWWGG	1 cut(s)	925
Bst2UI	CCWGG	1 cut(s)	740
Bst4CI	ACNGT	8 cut(s)	160, 179, 589, 875, 963, 1027, 1370, 1413
Bst6I	CTCTTC	1 cut(s)	828
BstACI	GRCGYC	2 cut(s)	54, 518
BstAFI	CTTAAG	1 cut(s)	697
BstAUI	TGTACA	2 cut(s)	3, 477
BstC8I	GCNNGC	2 cut(s)	438, 669
BstDEI	CTNAG	4 cut(s)	405, 912, 1040, 1394
BstF5I	GGATG	5 cut(s)	102, 474, 480, 682, 1344
BstFNI	CGCG	2 cut(s)	111, 172
BstH2I	RGCGCY	1 cut(s)	1336
BstHHI	GCGC	2 cut(s)	174, 1335
BstKTI	GATC	9 cut(s)	82, 202, 388, 661, 777, 906, 1114, 1135, 1168
BstMAI	GTCTC	1 cut(s)	1050
BstMBI	GATC	9 cut(s)	79, 199, 385, 658, 774, 903, 1111, 1132, 1165
BstMWI	GCNNNNNNNGC	6 cut(s)	236, 370, 407, 735, 1234, 1397
BstNI	CCWGG	1 cut(s)	740
BstNSI	RCATGY	2 cut(s)	121, 667
BstSCI	CCNGG	4 cut(s)	388, 543, 738, 1248
BstSFI	CTRYAG	1 cut(s)	175
BstSLI	GKGCMC	2 cut(s)	550, 1039
BstUI	CGCG	2 cut(s)	111, 172
BstV1I	GCAGC	2 cut(s)	972, 1387
BstV2I	GAAGAC	1 cut(s)	1056
BstXI	CCANNNNNNTGG	1 cut(s)	436
Bsu15I	ATCGAT	1 cut(s)	384
Bsu36I	CCTNAGG	1 cut(s)	405
BsuI	GTATCC	2 cut(s)	242, 1198
BsuRI	GGCC	6 cut(s)	75, 96, 259, 378, 440, 1248
BsuTUI	ATCGAT	1 cut(s)	384
BtsCI	GGATG	5 cut(s)	102, 474, 480, 682, 1344
BtsIMutI	CAGTG	1 cut(s)	1375
BveI	ACCTGC	2 cut(s)	1132, 1244
Cac8I	GCNNGC	2 cut(s)	438, 669
CaiI	CAGNNNCTG	1 cut(s)	1217
CciI	TCATGA	1 cut(s)	538
CfoI	GCGC	2 cut(s)	174, 1335
Cfr13I	GGNCC	1 cut(s)	258
ClaI	ATCGAT	1 cut(s)	384
CseI	GACGC	2 cut(s)	62, 526
Csp6I	GTAC	9 cut(s)	4, 339, 478, 585, 607, 862, 959, 1028, 1352
CviAII	CATG	8 cut(s)	118, 244, 510, 539, 664, 989, 1031, 1318
CviQI	GTAC	9 cut(s)	4, 339, 478, 585, 607, 862, 959, 1028, 1352
DdeI	CTNAG	4 cut(s)	405, 912, 1040, 1394
DpnI	GATC	9 cut(s)	81, 201, 387, 660, 776, 905, 1113, 1134, 1167
DpnII	GATC	9 cut(s)	79, 199, 385, 658, 774, 903, 1111, 1132, 1165
DraI	TTTAAA	1 cut(s)	825
DrdI	GACNNNNNNGTC	1 cut(s)	1064
DseDI	GACNNNNNNGTC	1 cut(s)	1064
EaeI	YGGCCR	3 cut(s)	376, 438, 1246
Eam1104I	CTCTTC	1 cut(s)	828
EarI	CTCTTC	1 cut(s)	828
Ecl136II	GAGCTC	1 cut(s)	1228
Eco130I	CCWWGG	1 cut(s)	925
Eco24I	GRGCYC	3 cut(s)	366, 1230, 1393
Eco47III	AGCGCT	1 cut(s)	1334
Eco53kI	GAGCTC	1 cut(s)	1228
Eco57I	CTGAAG	2 cut(s)	156, 446
Eco81I	CCTNAGG	1 cut(s)	405
Eco88I	CYCGRG	1 cut(s)	1122
EcoICRI	GAGCTC	1 cut(s)	1228
EcoRII	CCWGG	1 cut(s)	738
EcoT14I	CCWWGG	1 cut(s)	925
EcoT38I	GRGCYC	3 cut(s)	366, 1230, 1393
ErhI	CCWWGG	1 cut(s)	925
FaeI	CATG	8 cut(s)	121, 247, 513, 542, 667, 992, 1034, 1321
FalI	AAGNNNNNCTT	2 cut(s)	822, 854
FaqI	GGGAC	2 cut(s)	49, 491
FatI	CATG	8 cut(s)	117, 243, 509, 538, 663, 988, 1030, 1317
FauI	CCCGC	1 cut(s)	1396
FbaI	TGATCA	4 cut(s)	658, 774, 903, 1132
Fnu4HI	GCNGC	2 cut(s)	986, 1401
FokI	GGATG	5 cut(s)	89, 481, 487, 689, 1331
FriOI	GRGCYC	3 cut(s)	366, 1230, 1393
Fsp4HI	GCNGC	2 cut(s)	986, 1401
FspBI	CTAG	1 cut(s)	926
GlaI	GCGC	2 cut(s)	173, 1334
GluI	GCNGC	2 cut(s)	986, 1401
GsaI	CCCAGC	1 cut(s)	620
GsuI	CTGGAG	1 cut(s)	1194
HaeII	RGCGCY	1 cut(s)	1336
HaeIII	GGCC	6 cut(s)	75, 96, 259, 378, 440, 1248
HapII	CCGG	5 cut(s)	93, 215, 390, 544, 1249
HgaI	GACGC	2 cut(s)	62, 526
HhaI	GCGC	2 cut(s)	174, 1335
Hin1I	GRCGYC	2 cut(s)	54, 518
Hin1II	CATG	8 cut(s)	121, 247, 513, 542, 667, 992, 1034, 1321
Hin6I	GCGC	2 cut(s)	172, 1333
HinP1I	GCGC	2 cut(s)	172, 1333
HindIII	AAGCTT	1 cut(s)	596
HinfI	GANTC	3 cut(s)	205, 298, 692
HpaII	CCGG	5 cut(s)	93, 215, 390, 544, 1249
HphI	GGTGA	3 cut(s)	196, 808, 913
Hpy166II	GTNNAC	4 cut(s)	6, 480, 871, 1373
Hpy188I	TCNGA	4 cut(s)	204, 368, 447, 465
Hpy188III	TCNNGA	5 cut(s)	539, 878, 966, 1004, 1211
Hpy8I	GTNNAC	4 cut(s)	6, 480, 871, 1373
Hpy99I	CGWCG	2 cut(s)	56, 131
HpyAV	CCTTC	2 cut(s)	628, 703
HpyCH4III	ACNGT	8 cut(s)	160, 179, 589, 875, 963, 1027, 1370, 1413
HpyCH4V	TGCA	4 cut(s)	417, 592, 988, 1237
HpyF10VI	GCNNNNNNNGC	6 cut(s)	236, 370, 407, 735, 1234, 1397
HpyF3I	CTNAG	4 cut(s)	405, 912, 1040, 1394
Hsp92I	GRCGYC	2 cut(s)	54, 518
Hsp92II	CATG	8 cut(s)	121, 247, 513, 542, 667, 992, 1034, 1321
HspAI	GCGC	2 cut(s)	172, 1333
Ksp22I	TGATCA	4 cut(s)	658, 774, 903, 1132
Kzo9I	GATC	9 cut(s)	79, 199, 385, 658, 774, 903, 1111, 1132, 1165
LguI	GCTCTTC	1 cut(s)	828
LmnI	GCTCC	3 cut(s)	406, 1266, 1274
Lsp1109I	GCAGC	2 cut(s)	972, 1387
MaeI	CTAG	1 cut(s)	926
MaeIII	GTNAC	5 cut(s)	164, 514, 553, 1018, 1407
MalI	GATC	9 cut(s)	81, 201, 387, 660, 776, 905, 1113, 1134, 1167
MboI	GATC	9 cut(s)	79, 199, 385, 658, 774, 903, 1111, 1132, 1165
MboII	GAAGA	5 cut(s)	845, 1004, 1061, 1160, 1182
MhlI	GDGCHC	5 cut(s)	366, 550, 1039, 1230, 1393
MlsI	TGGCCA	1 cut(s)	440
MluCI	AATT	6 cut(s)	267, 486, 722, 894, 1147, 1159
MluNI	TGGCCA	1 cut(s)	440
MlyI	GAGTC	1 cut(s)	307
Mox20I	TGGCCA	1 cut(s)	440
MroXI	GAANNNNTTC	2 cut(s)	119, 999
MscI	TGGCCA	1 cut(s)	440
MseI	TTAA	8 cut(s)	396, 489, 698, 765, 824, 1088, 1146, 1284
MslI	CAYNNNNRTG	2 cut(s)	158, 1242
Msp20I	TGGCCA	1 cut(s)	440
MspCI	CTTAAG	1 cut(s)	697
MspI	CCGG	5 cut(s)	93, 215, 390, 544, 1249
MspR9I	CCNGG	4 cut(s)	390, 545, 740, 1250
Mva1269I	GAATGC	1 cut(s)	375
MvaI	CCWGG	1 cut(s)	740
MvnI	CGCG	2 cut(s)	111, 172
MwoI	GCNNNNNNNGC	6 cut(s)	236, 370, 407, 735, 1234, 1397
NciI	CCSGG	3 cut(s)	390, 545, 1250
NdeII	GATC	9 cut(s)	79, 199, 385, 658, 774, 903, 1111, 1132, 1165
NlaIII	CATG	8 cut(s)	121, 247, 513, 542, 667, 992, 1034, 1321
NlaIV	GGNNCC	2 cut(s)	549, 1036
NmeAIII	GCCGAG	3 cut(s)	51, 546, 697
NmuCI	GTSAC	2 cut(s)	164, 514
NspI	RCATGY	2 cut(s)	121, 667
OliI	CACNNNNGTG	1 cut(s)	158
PaeR7I	CTCGAG	1 cut(s)	1122
PagI	TCATGA	1 cut(s)	538
PciI	ACATGT	1 cut(s)	117
PciSI	GCTCTTC	1 cut(s)	828
PctI	GAATGC	1 cut(s)	375
PdmI	GAANNNNTTC	2 cut(s)	119, 999
PfeI	GAWTC	2 cut(s)	205, 692
PkrI	GCNGC	2 cut(s)	987, 1402
PleI	GAGTC	1 cut(s)	306
PpsI	GAGTC	1 cut(s)	306
PscI	ACATGT	1 cut(s)	117
PshBI	ATTAAT	1 cut(s)	489
PsiI	TTATAA	2 cut(s)	309, 810
Psp124BI	GAGCTC	1 cut(s)	1230
Psp6I	CCWGG	1 cut(s)	738
PspFI	CCCAGC	1 cut(s)	616
PspGI	CCWGG	1 cut(s)	738
PspN4I	GGNNCC	2 cut(s)	549, 1036
PspPI	GGNCC	1 cut(s)	258
PspXI	VCTCGAGB	1 cut(s)	1122
PsrI	GAACNNNNNNTAC	2 cut(s)	568, 600
PstNI	CAGNNNCTG	1 cut(s)	1217
RsaI	GTAC	9 cut(s)	5, 340, 479, 586, 608, 863, 960, 1029, 1353
RsaNI	GTAC	9 cut(s)	4, 339, 478, 585, 607, 862, 959, 1028, 1352
RseI	CAYNNNNRTG	2 cut(s)	158, 1242
SacI	GAGCTC	1 cut(s)	1230
SapI	GCTCTTC	1 cut(s)	828
SaqAI	TTAA	8 cut(s)	396, 489, 698, 765, 824, 1088, 1146, 1284
SatI	GCNGC	2 cut(s)	986, 1401
Sau3AI	GATC	9 cut(s)	79, 199, 385, 658, 774, 903, 1111, 1132, 1165
Sau96I	GGNCC	1 cut(s)	258
SchI	GAGTC	1 cut(s)	307
ScrFI	CCNGG	4 cut(s)	390, 545, 740, 1250
SduI	GDGCHC	5 cut(s)	366, 550, 1039, 1230, 1393
SfcI	CTRYAG	1 cut(s)	175
Sfr274I	CTCGAG	1 cut(s)	1122
SlaI	CTCGAG	1 cut(s)	1122
SmiMI	CAYNNNNRTG	2 cut(s)	158, 1242
SmlI	CTYRAG	3 cut(s)	324, 697, 1122
SmoI	CTYRAG	3 cut(s)	324, 697, 1122
Sse9I	AATT	6 cut(s)	267, 486, 722, 894, 1147, 1159
SsiI	CCGC	4 cut(s)	41, 109, 239, 1403
SspI	AATATT	1 cut(s)	954
SspMI	CTAG	1 cut(s)	926
SstI	GAGCTC	1 cut(s)	1230
StyD4I	CCNGG	4 cut(s)	388, 543, 738, 1248
StyI	CCWWGG	1 cut(s)	925
TaaI	ACNGT	8 cut(s)	160, 179, 589, 875, 963, 1027, 1370, 1413
TaqI	TCGA	6 cut(s)	78, 126, 384, 1003, 1123, 1329
TasI	AATT	6 cut(s)	267, 486, 722, 894, 1147, 1159
TatI	WGTACW	3 cut(s)	3, 477, 861
TfiI	GAWTC	2 cut(s)	205, 692
Tru1I	TTAA	8 cut(s)	396, 489, 698, 765, 824, 1088, 1146, 1284
Tru9I	TTAA	8 cut(s)	396, 489, 698, 765, 824, 1088, 1146, 1284
TscAI	CASTG	1 cut(s)	1375
TseFI	GTSAC	2 cut(s)	164, 514
TseI	GCWGC	2 cut(s)	985, 1400
Tsp45I	GTSAC	2 cut(s)	164, 514
TspDTI	ATGAA	6 cut(s)	527, 775, 783, 815, 1005, 1379
TspGWI	ACGGA	1 cut(s)	1319
TspRI	CASTG	1 cut(s)	1375
Vha464I	CTTAAG	1 cut(s)	697
VspI	ATTAAT	1 cut(s)	489
XapI	RAATTY	2 cut(s)	267, 722
XceI	RCATGY	2 cut(s)	121, 667
XcmI	CCANNNNNNNNNTGG	2 cut(s)	433, 448
XhoI	CTCGAG	1 cut(s)	1122
XmaJI	CCTAGG	1 cut(s)	925
XmnI	GAANNNNTTC	2 cut(s)	119, 999
XspI	CTAG	1 cut(s)	926

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.