Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0001022

Physical Location & Seq

Genomic Coordinates Forward (+)

32824640 .. 32828433

Gene Structure 3794 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024181

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGGCCGAGACTGACACTGGCGCCGCCGCCACAACGACGCCACCAGTCGACACTTCTTCCTCCACCGACTCTGTCACCAGTGCACCTCCGCCGCCGGCGAAGCCAGCGATTAAACGCTGGGCCGACGAAGAGGATGATCCGCCGGAGGAGCCGGAGAAAACCGAAGCTCCTCCGTCTACTTCAGACCAGCCGGAGCTCGAAGTCGCCGCATTGAAGATCACTGAGAACAAGTTCCTGGACGATCCTGAAGACTCTAATATCAGCGCCGTTACGGCCGGCGACACGCCGTACACGTCGGCGAGTACTTTCGAGGACCTGAATCTACCGGAGGCGGTGCTCAAGGGTTTGTATGTAGAGATGGGCTTCAAAAAGCCCAGTAAAATCCAGGCGATCACTTTGCCTATGATTTTGACTCCTCCGTACAAAGATCTGGTTGCTCAGGCCCATAATGGTTCCGGGAAGACGACCTGTTTTGTGCTTGGTATGCTCGGCCGTGTTGATCCCAATGTGAAAGCTCCTCAGGCTCTCTGCATTTGTCCCACCAGAGAGTTGGCTATTCAGAATATGGAGGTTCTTCAGAAAATGGGGAAATACACTGGGATTACTTCGGAGTGTGCCGTCCCTTCAGATAGGGAGAGGAATGCACCTTCGCCTAACTTCCGGGCGCCAGTTACGGCACAAATTGTGATTGGAACTCCTGGTACTATCAAGAGATGGATGTCCATGAAAAAGCTGGGTGTAAGCCGCGTGAAGGTCCTTGTTTTCGATGAGGCTGATCACATGCTGGCTGAGGATGGCTTCCAAGATGATTCCTTGAGGATAAAGAGGGACACAGAAAAAGTTAGCCCTAACTGCCAGGTTCTTCTGTTTTCAGCTACATTTAATGAAAGAGTCACAAATTTTGTCTCAAGGGTTGTGAAACGTGGTAACAATCAACTTTTTGTCAAGAAGGAAGAGCTATCTTTGGAGGGTGTTAAGCAGTACAAGGTGTACTGTCCTGATGAACTGAGCAAGATTGAGGTTATCAAGACCAAAATTTTTGACCTGGGAGAAAAATTAGGACAGAGGATTATATTTGTTCGGACAAAAAGTAGCGCAAGAATGTTGTATCAACAACTTTCTGATGATGGTTATGCTGTTACTGCTATTCAAGGTGCCCTCAACACCGAGGATAGAGACAAAATAATCAAAGAGTTTAAAGATGGTTTAACCCAAGTTCTCATATCAACTGATGTACTTGCCAGAGGCTTTGACCAACAGCAGGTTAATTGTGTTGTCAATTATGATCTTCCGGTCAAATATTCACCTGGTCCCCGGTCACAACCTGTAGAACCTGATTATGAGGTGTACCTGCATAGAATTGGCAGGGCAGGGCGTTTTGGTCGCAAGGGAGCTGTGTTTAACTTGATTTTCGATGATAATGACGAGTTGGTCATGTCAAAAATTGAACAGTATTTTGACATCAAAGTACCAGAGGTTAAAAATACTGATGAGGCTTTTGAAGGGGCTCTTAAAACAGCTGGCTTACTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005730 GO:0005737 GO:0005886 GO:0006139 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0008026 GO:0008104 GO:0008150 GO:0008152 GO:0008186 GO:0009266 GO:0009408 GO:0009409 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0010501 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0016973 GO:0017111 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033993 GO:0034613 GO:0034641 GO:0042221 GO:0042623 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070035 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0090304 GO:0097305 GO:0140098 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

511

Amino Acids

56.34

Weight (kDa)

5.12

Isoelectric Point (pI)

40.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	127 - 299	1.6e-35	DEAD/DEAH box helicase
ResIII	PF04851	143 - 295	3.6e-07	Type III restriction enzyme, res subunit
Helicase_C	PF00271	343 - 461	6.5e-25	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001022)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53110
fragaria_vesca	FvH4_6g17230 FvH4_6g17230 FvH4_6g17230 FvH4_6g17280 FvH4_6g17280
malus_domestica	MD12G1102600.v1.1 MD14G1096800.v1.1
prunus_persica	Prupe.3G009100_v2.0.a1 Prupe.7G122600_v2.0.a1
pyrus_communis	pycom03g08760 pycom12g10060 pycom14g09450
rosa_chinensis	RchiOBHm_Chr3g0471311 RchiOBHm_Chr3g0471321 RchiOBHm_Chr3g0471361 RchiOBHm_Chr3g0471391
rosa_laevigata	RLG00000024181 RLG00000024187 RLG00000024188
rosa_multiflora	Rmu_sc0006582.1_g000015 Rmu_sc0006582.1_g000018 Rmu_sc0009082.1_g000003 Rmu_sc0010513.1_g000003 Rmu_sc0015755.1_g000002 Rmu_sc0030425.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409980 Rroxscaffold_6G00410000 Rroxscaffold_6G00410060 Rroxscaffold_6G00410080
rosa_rugosa	Rorug03G0117100 Rorug03G0117100 Rorug03G0117100 Rorug03G0117400 Rorug03G0117500 Rorug03G0117500
rosa_samantha	Rh3AG166500 Rh3AG166600 Rh3AG166700 Rh3AG167100 Rh3BG191900 Rh3BG192000 Rh3BG192100 Rh3BG192400 Rh3BG192500 Rh3BG192800 Rh3CG182200 Rh3CG182300 Rh3CG182400 Rh3CG182700 Rh3CG182800 Rh3CG183200 Rh3DG182700 Rh3DG183100 Rh3DG183200 Rh3DG183700 Rh3DG183800
rosa_wichuraiana	Rw3G015670 Rw3G015680 Rw3G015730 Rw3G015760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1430
Acc36I	ACCTGC	2 cut(s)	1252, 1359
AccB1I	GGYRCC	3 cut(s)	20, 664, 1154
AccI	GTMKAC	2 cut(s)	48, 176
AccII	CGCG	1 cut(s)	747
AciI	CCGC	8 cut(s)	24, 27, 89, 92, 140, 207, 332, 745
AclWI	GGATC	3 cut(s)	131, 236, 494
AcoI	YGGCCR	3 cut(s)	3, 273, 490
AcsI	RAATTY	2 cut(s)	898, 1035
AcuI	CTGAAG	4 cut(s)	165, 267, 560, 609
AcyI	GRCGYC	3 cut(s)	21, 38, 665
AfaI	GTAC	9 cut(s)	290, 304, 422, 703, 983, 992, 1236, 1349, 1470
AfiI	CCNNNNNNNGG	2 cut(s)	751, 1261
AflIII	ACRYGT	1 cut(s)	291
AgsI	TTSAA	5 cut(s)	214, 367, 1151, 1448, 1502
AjiI	CACGTC	1 cut(s)	294
AjnI	CCWGG	6 cut(s)	234, 384, 697, 855, 1044, 1306
AluBI	AGCT	8 cut(s)	167, 196, 515, 733, 875, 958, 1394, 1520
AluI	AGCT	8 cut(s)	167, 196, 515, 733, 875, 958, 1394, 1520
Alw21I	GWGCWC	3 cut(s)	85, 198, 339
Alw26I	GTCTC	3 cut(s)	2, 910, 1170
Alw44I	GTGCAC	1 cut(s)	81
AlwI	GGATC	3 cut(s)	131, 236, 494
AoxI	GGCC	5 cut(s)	3, 120, 273, 441, 490
ApaLI	GTGCAC	1 cut(s)	81
ApoI	RAATTY	2 cut(s)	898, 1035
Asp700I	GAANNNNTTC	1 cut(s)	230
AspLEI	GCGC	4 cut(s)	23, 266, 667, 1097
AspS9I	GGNCC	5 cut(s)	120, 313, 442, 754, 1310
AsuC2I	CCSGG	3 cut(s)	457, 662, 1315
AsuHPI	GGTGA	2 cut(s)	67, 1296
AvaII	GGWCC	3 cut(s)	313, 754, 1310
AxyI	CCTNAGG	1 cut(s)	519
BaeGI	GKGCMC	2 cut(s)	85, 1159
BanI	GGYRCC	3 cut(s)	20, 664, 1154
BanII	GRGCYC	2 cut(s)	198, 1510
BbsI	GAAGAC	2 cut(s)	255, 467
Bbv12I	GWGCWC	3 cut(s)	85, 198, 339
BbvCI	CCTCAGC	1 cut(s)	789
BccI	CCATC	5 cut(s)	352, 708, 788, 1121, 1196
BceAI	ACGGC	6 cut(s)	251, 271, 288, 477, 602, 690
BcgI	CGANNNNNNTGC	2 cut(s)	379, 413
BciT130I	CCWGG	6 cut(s)	236, 386, 699, 857, 1046, 1308
BclI	TGATCA	1 cut(s)	775
BcnI	CCSGG	3 cut(s)	457, 662, 1315
BcoDI	GTCTC	3 cut(s)	2, 910, 1170
BfmI	CTRYAG	1 cut(s)	1326
BfoI	RGCGCY	3 cut(s)	24, 267, 668
BfuAI	ACCTGC	2 cut(s)	1252, 1359
BglI	GCCNNNNNGGC	1 cut(s)	272
BglII	AGATCT	1 cut(s)	427
BisI	GCNGC	5 cut(s)	24, 27, 92, 207, 745
BlsI	GCNGC	5 cut(s)	25, 28, 93, 208, 746
BmcAI	AGTACT	1 cut(s)	304
Bme1390I	CCNGG	9 cut(s)	236, 386, 457, 662, 699, 857, 1046, 1308, 1315
Bme18I	GGWCC	3 cut(s)	313, 754, 1310
BmgBI	CACGTC	1 cut(s)	294
BmgT120I	GGNCC	5 cut(s)	120, 313, 442, 754, 1310
BmiI	GGNNCC	6 cut(s)	22, 150, 454, 666, 1156, 1312
BmrFI	CCNGG	9 cut(s)	236, 386, 457, 662, 699, 857, 1046, 1308, 1315
BmrI	ACTGGG	2 cut(s)	369, 606
BmuI	ACTGGG	2 cut(s)	369, 606
BpiI	GAAGAC	2 cut(s)	255, 467
Bpu10I	CCTNAGC	2 cut(s)	438, 789
BpuEI	CTTGAG	3 cut(s)	323, 835, 892
BpuMI	CCSGG	3 cut(s)	457, 662, 1315
BsaHI	GRCGYC	3 cut(s)	21, 38, 665
BsaJI	CCNNGG	3 cut(s)	1045, 1167, 1313
BsaWI	WCCGGW	2 cut(s)	325, 1291
BsaXI	ACNNNNNCTCC	2 cut(s)	151, 181
Bsc4I	CCNNNNNNNGG	2 cut(s)	751, 1261
Bse118I	RCCGGY	2 cut(s)	94, 275
Bse1I	ACTGG	6 cut(s)	22, 44, 78, 375, 601, 668
Bse21I	CCTNAGG	1 cut(s)	519
BseBI	CCWGG	6 cut(s)	236, 386, 699, 857, 1046, 1308
BseDI	CCNNGG	3 cut(s)	1045, 1167, 1313
BseGI	GGATG	3 cut(s)	139, 723, 799
BseLI	CCNNNNNNNGG	2 cut(s)	751, 1261
BseMII	CTCAG	5 cut(s)	213, 452, 533, 780, 998
BseNI	ACTGG	6 cut(s)	22, 44, 78, 375, 601, 668
BseRI	GAGGAG	4 cut(s)	159, 161, 405, 507
BseSI	GKGCMC	2 cut(s)	85, 1159
BseX3I	CGGCCG	2 cut(s)	273, 490
BseYI	CCCAGC	2 cut(s)	117, 733
Bsh1236I	CGCG	1 cut(s)	747
Bsh1285I	CGRYCG	2 cut(s)	276, 493
BshFI	GGCC	5 cut(s)	5, 122, 275, 443, 492
BshNI	GGYRCC	3 cut(s)	20, 664, 1154
BsiEI	CGRYCG	2 cut(s)	276, 493
BsiHKAI	GWGCWC	3 cut(s)	85, 198, 339
BslFI	GGGAC	4 cut(s)	522, 605, 842, 1296
BslI	CCNNNNNNNGG	2 cut(s)	751, 1261
BsmAI	GTCTC	3 cut(s)	2, 910, 1170
BsmFI	GGGAC	4 cut(s)	522, 605, 842, 1296
BsmI	GAATGC	1 cut(s)	646
BsnI	GGCC	5 cut(s)	5, 122, 275, 443, 492
Bsp1286I	GDGCHC	5 cut(s)	85, 198, 339, 1159, 1510
Bsp143I	GATC	8 cut(s)	136, 216, 241, 390, 427, 499, 775, 1285
BspACI	CCGC	8 cut(s)	24, 27, 89, 92, 140, 207, 332, 745
BspANI	GGCC	5 cut(s)	5, 122, 275, 443, 492
BspCNI	CTCAG	5 cut(s)	214, 451, 532, 781, 999
BspFNI	CGCG	1 cut(s)	747
BspLI	GGNNCC	6 cut(s)	22, 150, 454, 666, 1156, 1312
BspMI	ACCTGC	2 cut(s)	1252, 1359
BspPI	GGATC	3 cut(s)	131, 236, 494
BspQI	GCTCTTC	1 cut(s)	948
BspT107I	GGYRCC	3 cut(s)	20, 664, 1154
BsrFI	RCCGGY	2 cut(s)	94, 275
BsrI	ACTGG	6 cut(s)	22, 44, 78, 375, 601, 668
BssAI	RCCGGY	2 cut(s)	94, 275
BssECI	CCNNGG	3 cut(s)	1045, 1167, 1313
BssMI	GATC	8 cut(s)	136, 216, 241, 390, 427, 499, 775, 1285
BssNI	GRCGYC	3 cut(s)	21, 38, 665
Bst2UI	CCWGG	6 cut(s)	236, 386, 699, 857, 1046, 1308
Bst4CI	ACNGT	3 cut(s)	995, 1452, 1530
Bst6I	CTCTTC	2 cut(s)	123, 948
BstACI	GRCGYC	3 cut(s)	21, 38, 665
BstC8I	GCNNGC	5 cut(s)	96, 105, 277, 786, 1522
BstDEI	CTNAG	5 cut(s)	222, 438, 519, 789, 1007
BstF5I	GGATG	3 cut(s)	139, 723, 799
BstFNI	CGCG	1 cut(s)	747
BstH2I	RGCGCY	3 cut(s)	24, 267, 668
BstHHI	GCGC	4 cut(s)	23, 266, 667, 1097
BstKTI	GATC	8 cut(s)	139, 219, 244, 393, 430, 502, 778, 1288
BstMAI	GTCTC	3 cut(s)	2, 910, 1170
BstMBI	GATC	8 cut(s)	136, 216, 241, 390, 427, 499, 775, 1285
BstMCI	CGRYCG	2 cut(s)	276, 493
BstMWI	GCNNNNNNNGC	8 cut(s)	100, 104, 148, 272, 484, 521, 852, 1142
BstNI	CCWGG	6 cut(s)	236, 386, 699, 857, 1046, 1308
BstNSI	RCATGY	1 cut(s)	784
BstSCI	CCNGG	9 cut(s)	234, 384, 455, 660, 697, 855, 1044, 1306, 1313
BstSFI	CTRYAG	1 cut(s)	1326
BstSLI	GKGCMC	2 cut(s)	85, 1159
BstUI	CGCG	1 cut(s)	747
BstV2I	GAAGAC	2 cut(s)	255, 467
BstX2I	RGATCY	1 cut(s)	427
BstXI	CCANNNNNNTGG	1 cut(s)	550
BstYI	RGATCY	1 cut(s)	427
BstZI	CGGCCG	2 cut(s)	273, 490
Bsu36I	CCTNAGG	1 cut(s)	519
BsuRI	GGCC	5 cut(s)	5, 122, 275, 443, 492
BtrI	CACGTC	1 cut(s)	294
BtsCI	GGATG	3 cut(s)	139, 723, 799
BtsIMutI	CAGTG	4 cut(s)	15, 85, 219, 594
BveI	ACCTGC	2 cut(s)	1252, 1359
Cac8I	GCNNGC	5 cut(s)	96, 105, 277, 786, 1522
CfoI	GCGC	4 cut(s)	23, 266, 667, 1097
Cfr10I	RCCGGY	2 cut(s)	94, 275
Cfr13I	GGNCC	5 cut(s)	120, 313, 442, 754, 1310
CseI	GACGC	1 cut(s)	46
CsiI	ACCWGGT	1 cut(s)	1306
Csp6I	GTAC	9 cut(s)	289, 303, 421, 702, 982, 991, 1235, 1348, 1469
CviAII	CATG	3 cut(s)	724, 781, 1435
CviQI	GTAC	9 cut(s)	289, 303, 421, 702, 982, 991, 1235, 1348, 1469
DdeI	CTNAG	5 cut(s)	222, 438, 519, 789, 1007
DinI	GGCGCC	2 cut(s)	22, 666
DpnI	GATC	8 cut(s)	138, 218, 243, 392, 429, 501, 777, 1287
DpnII	GATC	8 cut(s)	136, 216, 241, 390, 427, 499, 775, 1285
DraI	TTTAAA	1 cut(s)	1198
DrdI	GACNNNNNNGTC	1 cut(s)	1430
DseDI	GACNNNNNNGTC	1 cut(s)	1430
EaeI	YGGCCR	3 cut(s)	3, 273, 490
EagI	CGGCCG	2 cut(s)	273, 490
Eam1104I	CTCTTC	2 cut(s)	123, 948
EarI	CTCTTC	2 cut(s)	123, 948
EciI	GGCGGA	2 cut(s)	78, 129
Ecl136II	GAGCTC	1 cut(s)	196
EclXI	CGGCCG	2 cut(s)	273, 490
Eco24I	GRGCYC	2 cut(s)	198, 1510
Eco47I	GGWCC	3 cut(s)	313, 754, 1310
Eco52I	CGGCCG	2 cut(s)	273, 490
Eco53kI	GAGCTC	1 cut(s)	196
Eco57I	CTGAAG	4 cut(s)	165, 267, 560, 609
Eco81I	CCTNAGG	1 cut(s)	519
EcoICRI	GAGCTC	1 cut(s)	196
EcoO109I	RGGNCCY	2 cut(s)	313, 754
EcoRII	CCWGG	6 cut(s)	234, 384, 697, 855, 1044, 1306
EcoT38I	GRGCYC	2 cut(s)	198, 1510
EgeI	GGCGCC	2 cut(s)	22, 666
EheI	GGCGCC	2 cut(s)	22, 666
FaeI	CATG	3 cut(s)	727, 784, 1438
FalI	AAGNNNNNCTT	2 cut(s)	1494, 1526
FaqI	GGGAC	4 cut(s)	522, 605, 842, 1296
FatI	CATG	3 cut(s)	723, 780, 1434
FbaI	TGATCA	1 cut(s)	775
FblI	GTMKAC	2 cut(s)	48, 176
Fnu4HI	GCNGC	5 cut(s)	24, 27, 92, 207, 745
FokI	GGATG	3 cut(s)	146, 730, 806
FriOI	GRGCYC	2 cut(s)	198, 1510
Fsp4HI	GCNGC	5 cut(s)	24, 27, 92, 207, 745
GlaI	GCGC	4 cut(s)	22, 265, 666, 1096
GluI	GCNGC	5 cut(s)	24, 27, 92, 207, 745
GsaI	CCCAGC	2 cut(s)	121, 737
HaeII	RGCGCY	3 cut(s)	24, 267, 668
HaeIII	GGCC	5 cut(s)	5, 122, 275, 443, 492
HgaI	GACGC	1 cut(s)	46
HhaI	GCGC	4 cut(s)	23, 266, 667, 1097
Hin1I	GRCGYC	3 cut(s)	21, 38, 665
Hin1II	CATG	3 cut(s)	727, 784, 1438
Hin6I	GCGC	4 cut(s)	21, 264, 665, 1095
HinP1I	GCGC	4 cut(s)	21, 264, 665, 1095
HincII	GTYRAC	1 cut(s)	49
HindII	GTYRAC	1 cut(s)	49
HinfI	GANTC	6 cut(s)	68, 251, 319, 412, 809, 891
HphI	GGTGA	2 cut(s)	67, 1296
Hpy166II	GTNNAC	6 cut(s)	49, 83, 177, 291, 991, 1348
Hpy188I	TCNGA	7 cut(s)	184, 561, 579, 610, 628, 1083, 1123
Hpy188III	TCNNGA	5 cut(s)	245, 709, 946, 998, 1027
Hpy8I	GTNNAC	6 cut(s)	49, 83, 177, 291, 991, 1348
Hpy99I	CGWCG	3 cut(s)	40, 128, 298
HpyAV	CCTTC	5 cut(s)	633, 657, 745, 943, 1496
HpyCH4III	ACNGT	3 cut(s)	995, 1452, 1530
HpyCH4IV	ACGT	2 cut(s)	293, 922
HpyCH4V	TGCA	4 cut(s)	83, 531, 644, 1354
HpyF10VI	GCNNNNNNNGC	8 cut(s)	100, 104, 148, 272, 484, 521, 852, 1142
HpyF3I	CTNAG	5 cut(s)	222, 438, 519, 789, 1007
HpySE526I	ACGT	2 cut(s)	293, 922
Hsp92I	GRCGYC	3 cut(s)	21, 38, 665
Hsp92II	CATG	3 cut(s)	727, 784, 1438
HspAI	GCGC	4 cut(s)	21, 264, 665, 1095
KasI	GGCGCC	2 cut(s)	20, 664
KroI	GCCGGC	2 cut(s)	94, 275
KroNI	GCCGGC	2 cut(s)	96, 277
Ksp22I	TGATCA	1 cut(s)	775
Kzo9I	GATC	8 cut(s)	136, 216, 241, 390, 427, 499, 775, 1285
LguI	GCTCTTC	1 cut(s)	948
LmnI	GCTCC	5 cut(s)	148, 172, 193, 520, 1391
MabI	ACCWGGT	1 cut(s)	1306
MaeII	ACGT	2 cut(s)	293, 922
MaeIII	GTNAC	7 cut(s)	73, 268, 670, 892, 926, 1138, 1317
MalI	GATC	8 cut(s)	138, 218, 243, 392, 429, 501, 777, 1287
MboI	GATC	8 cut(s)	136, 216, 241, 390, 427, 499, 775, 1285
MboII	GAAGA	9 cut(s)	48, 140, 226, 260, 472, 566, 854, 965, 1280
MflI	RGATCY	1 cut(s)	427
MhlI	GDGCHC	5 cut(s)	85, 198, 339, 1159, 1510
MluCI	AATT	8 cut(s)	681, 898, 1035, 1055, 1267, 1279, 1359, 1443
Mly113I	GGCGCC	2 cut(s)	21, 665
MlyI	GAGTC	4 cut(s)	62, 245, 406, 900
MreI	CGCCGGCG	1 cut(s)	94
MroNI	GCCGGC	2 cut(s)	94, 275
MroXI	GAANNNNTTC	1 cut(s)	230
MseI	TTAA	9 cut(s)	111, 882, 975, 1197, 1208, 1266, 1401, 1479, 1512
MspA1I	CMGCKG	1 cut(s)	1520
MspR9I	CCNGG	9 cut(s)	236, 386, 457, 662, 699, 857, 1046, 1308, 1315
Mva1269I	GAATGC	1 cut(s)	646
MvaI	CCWGG	6 cut(s)	236, 386, 699, 857, 1046, 1308
MvnI	CGCG	1 cut(s)	747
MwoI	GCNNNNNNNGC	8 cut(s)	100, 104, 148, 272, 484, 521, 852, 1142
NaeI	GCCGGC	2 cut(s)	96, 277
NarI	GGCGCC	2 cut(s)	21, 665
NciI	CCSGG	3 cut(s)	457, 662, 1315
NdeII	GATC	8 cut(s)	136, 216, 241, 390, 427, 499, 775, 1285
NgoMIV	GCCGGC	2 cut(s)	94, 275
NlaIII	CATG	3 cut(s)	727, 784, 1438
NlaIV	GGNNCC	6 cut(s)	22, 150, 454, 666, 1156, 1312
NmeAIII	GCCGAG	2 cut(s)	31, 468
NmuCI	GTSAC	3 cut(s)	73, 892, 1317
NspI	RCATGY	1 cut(s)	784
PciSI	GCTCTTC	1 cut(s)	948
PcsI	WCGNNNNNNNCGW	1 cut(s)	290
PctI	GAATGC	1 cut(s)	646
PdiI	GCCGGC	2 cut(s)	96, 277
PdmI	GAANNNNTTC	1 cut(s)	230
PfeI	GAWTC	2 cut(s)	319, 809
PflFI	GACNNNGTC	1 cut(s)	71
PfoI	TCCNGGA	2 cut(s)	234, 455
PkrI	GCNGC	5 cut(s)	25, 28, 93, 208, 746
PleI	GAGTC	4 cut(s)	62, 245, 406, 899
PluTI	GGCGCC	2 cut(s)	24, 668
PpsI	GAGTC	4 cut(s)	62, 245, 406, 899
PpuMI	RGGWCCY	2 cut(s)	313, 754
Psp124BI	GAGCTC	1 cut(s)	198
Psp5II	RGGWCCY	2 cut(s)	313, 754
Psp6I	CCWGG	6 cut(s)	234, 384, 697, 855, 1044, 1306
PspFI	CCCAGC	2 cut(s)	117, 733
PspGI	CCWGG	6 cut(s)	234, 384, 697, 855, 1044, 1306
PspN4I	GGNNCC	6 cut(s)	22, 150, 454, 666, 1156, 1312
PspPI	GGNCC	5 cut(s)	120, 313, 442, 754, 1310
PspPPI	RGGWCCY	2 cut(s)	313, 754
PsrI	GAACNNNNNNTAC	2 cut(s)	685, 717
PsuI	RGATCY	1 cut(s)	427
PsyI	GACNNNGTC	1 cut(s)	71
PvuII	CAGCTG	1 cut(s)	1520
RsaI	GTAC	9 cut(s)	290, 304, 422, 703, 983, 992, 1236, 1349, 1470
RsaNI	GTAC	9 cut(s)	289, 303, 421, 702, 982, 991, 1235, 1348, 1469
SacI	GAGCTC	1 cut(s)	198
SalI	GTCGAC	1 cut(s)	47
SapI	GCTCTTC	1 cut(s)	948
SaqAI	TTAA	9 cut(s)	111, 882, 975, 1197, 1208, 1266, 1401, 1479, 1512
SatI	GCNGC	5 cut(s)	24, 27, 92, 207, 745
Sau3AI	GATC	8 cut(s)	136, 216, 241, 390, 427, 499, 775, 1285
Sau96I	GGNCC	5 cut(s)	120, 313, 442, 754, 1310
ScaI	AGTACT	1 cut(s)	304
SchI	GAGTC	4 cut(s)	62, 245, 406, 900
ScrFI	CCNGG	9 cut(s)	236, 386, 457, 662, 699, 857, 1046, 1308, 1315
SduI	GDGCHC	5 cut(s)	85, 198, 339, 1159, 1510
SexAI	ACCWGGT	1 cut(s)	1306
SfcI	CTRYAG	1 cut(s)	1326
SfoI	GGCGCC	2 cut(s)	22, 666
SgrAI	CRCCGGYG	1 cut(s)	94
SinI	GGWCC	3 cut(s)	313, 754, 1310
SmlI	CTYRAG	3 cut(s)	338, 814, 907
SmoI	CTYRAG	3 cut(s)	338, 814, 907
Sse9I	AATT	8 cut(s)	681, 898, 1035, 1055, 1267, 1279, 1359, 1443
SsiI	CCGC	8 cut(s)	24, 27, 89, 92, 140, 207, 332, 745
SspDI	GGCGCC	2 cut(s)	20, 664
SspI	AATATT	1 cut(s)	1301
SstI	GAGCTC	1 cut(s)	198
StyD4I	CCNGG	9 cut(s)	234, 384, 455, 660, 697, 855, 1044, 1306, 1313
TaaI	ACNGT	3 cut(s)	995, 1452, 1530
TaiI	ACGT	2 cut(s)	296, 925
TaqI	TCGA	5 cut(s)	48, 198, 309, 765, 1413
TasI	AATT	8 cut(s)	681, 898, 1035, 1055, 1267, 1279, 1359, 1443
TatI	WGTACW	4 cut(s)	302, 981, 990, 1234
TauI	GCSGC	5 cut(s)	26, 29, 94, 209, 747
TfiI	GAWTC	2 cut(s)	319, 809
Tru1I	TTAA	9 cut(s)	111, 882, 975, 1197, 1208, 1266, 1401, 1479, 1512
Tru9I	TTAA	9 cut(s)	111, 882, 975, 1197, 1208, 1266, 1401, 1479, 1512
TscAI	CASTG	4 cut(s)	22, 85, 226, 601
TseFI	GTSAC	3 cut(s)	73, 892, 1317
Tsp45I	GTSAC	3 cut(s)	73, 892, 1317
TspDTI	ATGAA	3 cut(s)	740, 900, 1017
TspGWI	ACGGA	2 cut(s)	162, 408
TspRI	CASTG	4 cut(s)	22, 85, 226, 601
Tth111I	GACNNNGTC	1 cut(s)	71
VneI	GTGCAC	1 cut(s)	81
VpaK11BI	GGWCC	3 cut(s)	313, 754, 1310
XapI	RAATTY	2 cut(s)	898, 1035
XceI	RCATGY	1 cut(s)	784
XcmI	CCANNNNNNNNNTGG	2 cut(s)	547, 730
XmiI	GTMKAC	2 cut(s)	48, 176
XmnI	GAANNNNTTC	1 cut(s)	230
ZrmI	AGTACT	1 cut(s)	304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.