Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0001022

Physical Location & Seq

Genomic Coordinates Forward (+)

11398752 .. 11402302

Gene Structure 3551 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g09450.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGGCTGAGACCGCCGCCCCCGCTCCGGCGGAGAAGCCTGAGAAGCGGGAGACAAAACGATGGGCCGACGAAGAGGACGACCCTCCGGAGGAGCCCGAGAAGAAAGACGACGCTCCGGCGCCGTCTACTTCGGACCCGGAGGTAAACCTTACCGAATTGAAGATTACCGAGAACAAGTTCCTCGACGACCCCGAAGACTCCAATATCAGTGCCGTTATGGCCGGTGACACGCCGTACACGTCGGCGAGTAGTTTCGAGGATCTGAATCTGTCGCCGGATGTACTGAAGGGCTTGTATGTTGAGATGCAATTCAAAAAGCCGAGCAAAATCCAGGCAATCACTTTGCCAATGATTTTGACCCCGCCCTACAAAGATCTTATTGCTCAGGCGCATAATGGTTCGGGCAAAACCACTTGTTTCGTGCTTGGGATGCTCAGCCGTATCGATCCCAATATCAAAGCTCCTCAGGCGCTCTGCATTTGCCCCACCAGAGAGTTGGCCATTCAGAATCTCGAGGTTCTTCAGAAGATGGGGAAGTATACAGGGATAACTGCAGAGTGTGCTATCCCAACAGATAGGACAAGTTCTACCTCGGCGCAATCCAGGCCACCAGTATCGGCACAAATTGTGATTGGAACTCCTGGTACGATTAAGAGATTAATGTCGACGAAAAAAATCGGTGTGAGCCGTGTCAAGATTCTTGTTTTCGACGAGGCTGATCACATGCTTGCTGAGGATGGCTTTAAGGATGATTCTTTGAGGATAATGAATGACATAAAGAGATATAGCTCTCACTGCCAGGTGCTTTTGTTTTCTGCTACATTTAATGAAAAAGTCACGAACTTTGTTTCAAAAGTGATCAAAGGTGGTGGTAACCAACTCTTTGTAAAGAAAGAAGAGCTATCTTTGGAGGCTGTAAAGCAGTACAAGGTGTACTGTCCTGATGAATTGGCAAAGATTGACGTCATCAAAAGTAAAATATTTGAACTGGGAGAGAAATTGGGGCAGAGAATTATATTTGTACGGACAAAAAATAGTGCAAGAATGTTACATCAGCAACTTGTACAAGATGGTTATGCAGTTACTACTATTCAAGGTGCCCTCAATGCTGAAGATAGAGACAAAATAGTCAAGGAGTTCAAAGATGGTTTAACCCAAGTTCTTATATCAACTGACCTACTCGCTCGAGGATTTGATCAACAGCAGATTAATTGTGTTGTCAATTATGACCTTCCAATCAAATATAGAGAGGGCCCAAGGACACGTGATCCTCCCGAACCTGATTATGAGGTGTACTTGCATAGAATTGGAAGGGCGGGACGTTTTGGTCGCAAGGGGGCCGTGTTTAACTTGATTTGCGGTGATTGGGATGAGTCGACCATGTCAAAGATTGAGCAGTATTTTAACTCTCCAGTAACAGAGGTTGAAAACACCGAAGAAGCTTTCGAAGGCGCTCTGAAAGCAGCTGGCTTACTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005730 GO:0005737 GO:0005886 GO:0006139 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0008026 GO:0008104 GO:0008150 GO:0008152 GO:0008186 GO:0009266 GO:0009408 GO:0009409 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0010501 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0016973 GO:0017111 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033993 GO:0034613 GO:0034641 GO:0042221 GO:0042623 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070035 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0090304 GO:0097305 GO:0140098 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

493

Amino Acids

54.73

Weight (kDa)

5.35

Isoelectric Point (pI)

36.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001022)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53110
fragaria_vesca	FvH4_6g17230 FvH4_6g17230 FvH4_6g17230 FvH4_6g17280 FvH4_6g17280
malus_domestica	MD12G1102600.v1.1 MD14G1096800.v1.1
prunus_persica	Prupe.3G009100_v2.0.a1 Prupe.7G122600_v2.0.a1
pyrus_communis	pycom03g08760 pycom12g10060 pycom14g09450
rosa_chinensis	RchiOBHm_Chr3g0471311 RchiOBHm_Chr3g0471321 RchiOBHm_Chr3g0471361 RchiOBHm_Chr3g0471391
rosa_laevigata	RLG00000024181 RLG00000024187 RLG00000024188
rosa_multiflora	Rmu_sc0006582.1_g000015 Rmu_sc0006582.1_g000018 Rmu_sc0009082.1_g000003 Rmu_sc0010513.1_g000003 Rmu_sc0015755.1_g000002 Rmu_sc0030425.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409980 Rroxscaffold_6G00410000 Rroxscaffold_6G00410060 Rroxscaffold_6G00410080
rosa_rugosa	Rorug03G0117100 Rorug03G0117100 Rorug03G0117100 Rorug03G0117400 Rorug03G0117500 Rorug03G0117500
rosa_samantha	Rh3AG166500 Rh3AG166600 Rh3AG166700 Rh3AG167100 Rh3BG191900 Rh3BG192000 Rh3BG192100 Rh3BG192400 Rh3BG192500 Rh3BG192800 Rh3CG182200 Rh3CG182300 Rh3CG182400 Rh3CG182700 Rh3CG182800 Rh3CG183200 Rh3DG182700 Rh3DG183100 Rh3DG183200 Rh3DG183700 Rh3DG183800
rosa_wichuraiana	Rw3G015670 Rw3G015680 Rw3G015730 Rw3G015760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1127, 1326
AatII	GACGTC	1 cut(s)	966
AccB1I	GGYRCC	2 cut(s)	118, 1097
AccBSI	CCGCTC	1 cut(s)	23
AccI	GTMKAC	4 cut(s)	125, 539, 665, 1376
AccIII	TCCGGA	1 cut(s)	85
AciI	CCGC	8 cut(s)	12, 15, 21, 29, 46, 362, 1316, 1359
AclWI	GGATC	3 cut(s)	267, 440, 1262
AcoI	YGGCCR	2 cut(s)	219, 498
AcuI	CTGAAG	3 cut(s)	305, 506, 1131
AcvI	CACGTG	1 cut(s)	1265
AcyI	GRCGYC	2 cut(s)	119, 963
AfaI	GTAC	8 cut(s)	236, 282, 646, 926, 935, 1023, 1065, 1295
AfiI	CCNNNNNNNGG	2 cut(s)	25, 88
AflIII	ACRYGT	2 cut(s)	237, 1262
AgsI	TTSAA	7 cut(s)	160, 313, 852, 986, 1094, 1141, 1427
AjiI	CACGTC	1 cut(s)	240
AjnI	CCWGG	4 cut(s)	330, 602, 640, 798
AluBI	AGCT	5 cut(s)	461, 789, 901, 1442, 1466
AluI	AGCT	5 cut(s)	461, 789, 901, 1442, 1466
Alw26I	GTCTC	3 cut(s)	2, 44, 1113
AlwI	GGATC	3 cut(s)	267, 440, 1262
Ama87I	CYCGRG	3 cut(s)	95, 512, 1185
Aor13HI	TCCGGA	1 cut(s)	85
AoxI	GGCC	6 cut(s)	63, 219, 498, 605, 1252, 1338
ApaI	GGGCCC	1 cut(s)	1256
ApeKI	GCWGC	1 cut(s)	1463
AseI	ATTAAT	2 cut(s)	659, 1209
Asp700I	GAANNNNTTC	1 cut(s)	176
AspLEI	GCGC	5 cut(s)	121, 391, 472, 598, 1454
AspS9I	GGNCC	5 cut(s)	63, 133, 1252, 1253, 1338
AsuC2I	CCSGG	1 cut(s)	137
AsuHPI	GGTGA	2 cut(s)	236, 1373
AsuII	TTCGAA	1 cut(s)	1446
AvaI	CYCGRG	3 cut(s)	95, 512, 1185
AvaII	GGWCC	1 cut(s)	133
AxyI	CCTNAGG	1 cut(s)	465
BaeGI	GKGCMC	2 cut(s)	1102, 1256
BalI	TGGCCA	1 cut(s)	500
BanI	GGYRCC	2 cut(s)	118, 1097
BanII	GRGCYC	2 cut(s)	96, 1256
BbrPI	CACGTG	1 cut(s)	1265
BbsI	GAAGAC	1 cut(s)	201
BbvCI	CCTCAGC	1 cut(s)	732
BbvI	GCAGC	1 cut(s)	1475
BccI	CCATC	5 cut(s)	54, 523, 731, 1064, 1139
BceAI	ACGGC	6 cut(s)	106, 197, 217, 423, 672, 1325
BciT130I	CCWGG	4 cut(s)	332, 604, 642, 800
BclI	TGATCA	3 cut(s)	718, 858, 1195
BcnI	CCSGG	1 cut(s)	137
BcoDI	GTCTC	3 cut(s)	2, 44, 1113
BfmI	CTRYAG	1 cut(s)	552
BfoI	RGCGCY	3 cut(s)	122, 473, 1455
BglI	GCCNNNNNGGC	1 cut(s)	218
BglII	AGATCT	1 cut(s)	373
BisI	GCNGC	2 cut(s)	15, 1464
BlpI	GCTNAGC	1 cut(s)	434
BlsI	GCNGC	2 cut(s)	16, 1465
Bme1390I	CCNGG	5 cut(s)	137, 332, 604, 642, 800
Bme18I	GGWCC	1 cut(s)	133
BmeT110I	CYCGRG	3 cut(s)	95, 512, 1185
BmgBI	CACGTC	1 cut(s)	240
BmgT120I	GGNCC	5 cut(s)	63, 133, 1252, 1253, 1338
BmiI	GGNNCC	6 cut(s)	93, 120, 135, 1099, 1254, 1339
BmrFI	CCNGG	5 cut(s)	137, 332, 604, 642, 800
BmrI	ACTGGG	1 cut(s)	998
BmsI	GCATC	2 cut(s)	294, 420
BmuI	ACTGGG	1 cut(s)	998
BpiI	GAAGAC	1 cut(s)	201
BpmI	CTGGAG	1 cut(s)	1395
Bpu10I	CCTNAGC	2 cut(s)	384, 732
Bpu1102I	GCTNAGC	1 cut(s)	434
Bpu14I	TTCGAA	1 cut(s)	1446
BpuMI	CCSGG	1 cut(s)	137
Bsa29I	ATCGAT	1 cut(s)	444
BsaAI	YACGTR	1 cut(s)	1265
BsaBI	GATNNNNATC	1 cut(s)	264
BsaHI	GRCGYC	2 cut(s)	119, 963
BsaI	GGTCTC	1 cut(s)	2
BsaJI	CCNNGG	2 cut(s)	591, 1256
BsaWI	WCCGGW	1 cut(s)	85
Bsc4I	CCNNNNNNNGG	2 cut(s)	25, 88
Bse118I	RCCGGY	1 cut(s)	221
Bse1I	ACTGG	3 cut(s)	611, 993, 1412
Bse21I	CCTNAGG	1 cut(s)	465
Bse8I	GATNNNNATC	1 cut(s)	264
BseAI	TCCGGA	1 cut(s)	85
BseBI	CCWGG	4 cut(s)	332, 604, 642, 800
BseCI	ATCGAT	1 cut(s)	444
BseDI	CCNNGG	2 cut(s)	591, 1256
BseGI	GGATG	5 cut(s)	283, 435, 742, 754, 1375
BseJI	GATNNNNATC	1 cut(s)	264
BseLI	CCNNNNNNNGG	2 cut(s)	25, 88
BseMII	CTCAG	5 cut(s)	30, 398, 448, 479, 723
BseNI	ACTGG	3 cut(s)	611, 993, 1412
BseRI	GAGGAG	2 cut(s)	104, 453
BseSI	GKGCMC	2 cut(s)	1102, 1256
BseXI	GCAGC	1 cut(s)	1475
BshFI	GGCC	6 cut(s)	65, 221, 500, 607, 1254, 1340
BshNI	GGYRCC	2 cut(s)	118, 1097
BshVI	ATCGAT	1 cut(s)	444
BsiHKCI	CYCGRG	3 cut(s)	95, 512, 1185
BsiSI	CCGG	6 cut(s)	26, 86, 116, 137, 222, 275
BslFI	GGGAC	1 cut(s)	1332
BslI	CCNNNNNNNGG	2 cut(s)	25, 88
BsmAI	GTCTC	3 cut(s)	2, 44, 1113
BsmFI	GGGAC	1 cut(s)	1332
BsnI	GGCC	6 cut(s)	65, 221, 500, 607, 1254, 1340
Bso31I	GGTCTC	1 cut(s)	2
BsoBI	CYCGRG	3 cut(s)	95, 512, 1185
Bsp119I	TTCGAA	1 cut(s)	1446
Bsp120I	GGGCCC	1 cut(s)	1252
Bsp1286I	GDGCHC	3 cut(s)	96, 1102, 1256
Bsp13I	TCCGGA	1 cut(s)	85
Bsp1407I	TGTACA	1 cut(s)	1063
Bsp143I	GATC	7 cut(s)	259, 373, 445, 718, 858, 1195, 1267
Bsp1720I	GCTNAGC	1 cut(s)	434
BspACI	CCGC	8 cut(s)	12, 15, 21, 29, 46, 362, 1316, 1359
BspANI	GGCC	6 cut(s)	65, 221, 500, 607, 1254, 1340
BspCNI	CTCAG	5 cut(s)	31, 397, 447, 478, 724
BspDI	ATCGAT	1 cut(s)	444
BspEI	TCCGGA	1 cut(s)	85
BspLI	GGNNCC	6 cut(s)	93, 120, 135, 1099, 1254, 1339
BspMAI	CTGCAG	1 cut(s)	556
BspPI	GGATC	3 cut(s)	267, 440, 1262
BspQI	GCTCTTC	1 cut(s)	891
BspT104I	TTCGAA	1 cut(s)	1446
BspT107I	GGYRCC	2 cut(s)	118, 1097
BspTNI	GGTCTC	1 cut(s)	2
BsrBI	CCGCTC	1 cut(s)	23
BsrFI	RCCGGY	1 cut(s)	221
BsrGI	TGTACA	1 cut(s)	1063
BsrI	ACTGG	3 cut(s)	611, 993, 1412
BssAI	RCCGGY	1 cut(s)	221
BssECI	CCNNGG	2 cut(s)	591, 1256
BssMI	GATC	7 cut(s)	259, 373, 445, 718, 858, 1195, 1267
BssNAI	GTATAC	1 cut(s)	540
BssNI	GRCGYC	2 cut(s)	119, 963
BssT1I	CCWWGG	1 cut(s)	1256
Bst1107I	GTATAC	1 cut(s)	540
Bst2UI	CCWGG	4 cut(s)	332, 604, 642, 800
Bst4CI	ACNGT	2 cut(s)	938, 1476
Bst6I	CTCTTC	2 cut(s)	66, 891
BstACI	GRCGYC	2 cut(s)	119, 963
BstAPI	GCANNNNNTGC	1 cut(s)	560
BstAUI	TGTACA	1 cut(s)	1063
BstBAI	YACGTR	1 cut(s)	1265
BstBI	TTCGAA	1 cut(s)	1446
BstC8I	GCNNGC	2 cut(s)	729, 1468
BstDEI	CTNAG	6 cut(s)	6, 39, 384, 434, 465, 732
BstEII	GGTNACC	1 cut(s)	872
BstF5I	GGATG	5 cut(s)	283, 435, 742, 754, 1375
BstH2I	RGCGCY	3 cut(s)	122, 473, 1455
BstHHI	GCGC	5 cut(s)	121, 391, 472, 598, 1454
BstKTI	GATC	7 cut(s)	262, 376, 448, 721, 861, 1198, 1270
BstMAI	GTCTC	3 cut(s)	2, 44, 1113
BstMBI	GATC	7 cut(s)	259, 373, 445, 718, 858, 1195, 1267
BstNI	CCWGG	4 cut(s)	332, 604, 642, 800
BstNSI	RCATGY	1 cut(s)	727
BstPI	GGTNACC	1 cut(s)	872
BstSCI	CCNGG	5 cut(s)	135, 330, 602, 640, 798
BstSFI	CTRYAG	1 cut(s)	552
BstSLI	GKGCMC	2 cut(s)	1102, 1256
BstV1I	GCAGC	1 cut(s)	1475
BstV2I	GAAGAC	1 cut(s)	201
BstX2I	RGATCY	2 cut(s)	259, 373
BstXI	CCANNNNNNTGG	1 cut(s)	496
BstYI	RGATCY	2 cut(s)	259, 373
BstZ17I	GTATAC	1 cut(s)	540
Bsu15I	ATCGAT	1 cut(s)	444
Bsu36I	CCTNAGG	1 cut(s)	465
BsuRI	GGCC	6 cut(s)	65, 221, 500, 607, 1254, 1340
BsuTUI	ATCGAT	1 cut(s)	444
BtrI	CACGTC	1 cut(s)	240
BtsCI	GGATG	5 cut(s)	283, 435, 742, 754, 1375
BtsI	GCAGTG	1 cut(s)	793
BtsIMutI	CAGTG	2 cut(s)	214, 793
Cac8I	GCNNGC	2 cut(s)	729, 1468
CfoI	GCGC	5 cut(s)	121, 391, 472, 598, 1454
Cfr10I	RCCGGY	1 cut(s)	221
Cfr13I	GGNCC	5 cut(s)	63, 133, 1252, 1253, 1338
ClaI	ATCGAT	1 cut(s)	444
CseI	GACGC	1 cut(s)	119
Csp6I	GTAC	8 cut(s)	235, 281, 645, 925, 934, 1022, 1064, 1294
CspCI	CAANNNNNGTGG	2 cut(s)	850, 885
CviAII	CATG	2 cut(s)	724, 1381
CviQI	GTAC	8 cut(s)	235, 281, 645, 925, 934, 1022, 1064, 1294
DdeI	CTNAG	6 cut(s)	6, 39, 384, 434, 465, 732
DinI	GGCGCC	1 cut(s)	120
DpnI	GATC	7 cut(s)	261, 375, 447, 720, 860, 1197, 1269
DpnII	GATC	7 cut(s)	259, 373, 445, 718, 858, 1195, 1267
DrdI	GACNNNNNNGTC	2 cut(s)	1127, 1326
DseDI	GACNNNNNNGTC	2 cut(s)	1127, 1326
EaeI	YGGCCR	2 cut(s)	219, 498
Eam1104I	CTCTTC	2 cut(s)	66, 891
EarI	CTCTTC	2 cut(s)	66, 891
EciI	GGCGGA	1 cut(s)	44
Eco130I	CCWWGG	1 cut(s)	1256
Eco24I	GRGCYC	2 cut(s)	96, 1256
Eco31I	GGTCTC	1 cut(s)	2
Eco47I	GGWCC	1 cut(s)	133
Eco57I	CTGAAG	3 cut(s)	305, 506, 1131
Eco72I	CACGTG	1 cut(s)	1265
Eco81I	CCTNAGG	1 cut(s)	465
Eco88I	CYCGRG	3 cut(s)	95, 512, 1185
Eco91I	GGTNACC	1 cut(s)	872
EcoO109I	RGGNCCY	1 cut(s)	1252
EcoO65I	GGTNACC	1 cut(s)	872
EcoRII	CCWGG	4 cut(s)	330, 602, 640, 798
EcoT14I	CCWWGG	1 cut(s)	1256
EcoT38I	GRGCYC	2 cut(s)	96, 1256
EgeI	GGCGCC	1 cut(s)	120
EheI	GGCGCC	1 cut(s)	120
ErhI	CCWWGG	1 cut(s)	1256
FaeI	CATG	2 cut(s)	727, 1384
FaqI	GGGAC	1 cut(s)	1332
FatI	CATG	2 cut(s)	723, 1380
FauI	CCCGC	4 cut(s)	28, 39, 369, 1309
FbaI	TGATCA	3 cut(s)	718, 858, 1195
FblI	GTMKAC	4 cut(s)	125, 539, 665, 1376
Fnu4HI	GCNGC	2 cut(s)	15, 1464
FokI	GGATG	5 cut(s)	290, 442, 749, 761, 1382
FriOI	GRGCYC	2 cut(s)	96, 1256
Fsp4HI	GCNGC	2 cut(s)	15, 1464
GlaI	GCGC	5 cut(s)	120, 390, 471, 597, 1453
GluI	GCNGC	2 cut(s)	15, 1464
GsuI	CTGGAG	1 cut(s)	1395
HaeII	RGCGCY	3 cut(s)	122, 473, 1455
HaeIII	GGCC	6 cut(s)	65, 221, 500, 607, 1254, 1340
HapII	CCGG	6 cut(s)	26, 86, 116, 137, 222, 275
HgaI	GACGC	1 cut(s)	119
HhaI	GCGC	5 cut(s)	121, 391, 472, 598, 1454
Hin1I	GRCGYC	2 cut(s)	119, 963
Hin1II	CATG	2 cut(s)	727, 1384
Hin6I	GCGC	5 cut(s)	119, 389, 470, 596, 1452
HinP1I	GCGC	5 cut(s)	119, 389, 470, 596, 1452
HincII	GTYRAC	2 cut(s)	666, 1377
HindII	GTYRAC	2 cut(s)	666, 1377
HindIII	AAGCTT	1 cut(s)	1440
HinfI	GANTC	6 cut(s)	197, 265, 508, 697, 752, 1373
HpaII	CCGG	6 cut(s)	26, 86, 116, 137, 222, 275
HphI	GGTGA	2 cut(s)	236, 1373
Hpy166II	GTNNAC	8 cut(s)	126, 145, 237, 540, 666, 934, 1294, 1377
Hpy188I	TCNGA	5 cut(s)	133, 264, 507, 525, 1458
Hpy188III	TCNNGA	6 cut(s)	86, 512, 694, 838, 941, 1274
Hpy8I	GTNNAC	8 cut(s)	126, 145, 237, 540, 666, 934, 1294, 1377
Hpy99I	CGWCG	6 cut(s)	71, 113, 188, 244, 670, 713
HpyAV	CCTTC	4 cut(s)	280, 1241, 1305, 1442
HpyCH4III	ACNGT	2 cut(s)	938, 1476
HpyCH4IV	ACGT	4 cut(s)	239, 963, 1264, 1321
HpyCH4V	TGCA	6 cut(s)	307, 477, 554, 1040, 1079, 1300
HpyF3I	CTNAG	6 cut(s)	6, 39, 384, 434, 465, 732
HpySE526I	ACGT	4 cut(s)	239, 963, 1264, 1321
Hsp92I	GRCGYC	2 cut(s)	119, 963
Hsp92II	CATG	2 cut(s)	727, 1384
HspAI	GCGC	5 cut(s)	119, 389, 470, 596, 1452
KasI	GGCGCC	1 cut(s)	118
Kpn2I	TCCGGA	1 cut(s)	85
Ksp22I	TGATCA	3 cut(s)	718, 858, 1195
Kzo9I	GATC	7 cut(s)	259, 373, 445, 718, 858, 1195, 1267
LguI	GCTCTTC	1 cut(s)	891
LmnI	GCTCC	4 cut(s)	28, 91, 118, 466
Lsp1109I	GCAGC	1 cut(s)	1475
LweI	GCATC	2 cut(s)	294, 420
MaeII	ACGT	4 cut(s)	239, 963, 1264, 1321
MaeIII	GTNAC	6 cut(s)	224, 835, 872, 1047, 1081, 1414
MalI	GATC	7 cut(s)	261, 375, 447, 720, 860, 1197, 1269
MbiI	CCGCTC	1 cut(s)	23
MboI	GATC	7 cut(s)	259, 373, 445, 718, 858, 1195, 1267
MboII	GAAGA	9 cut(s)	83, 112, 172, 206, 512, 538, 908, 1124, 1448
MflI	RGATCY	2 cut(s)	259, 373
MhlI	GDGCHC	3 cut(s)	96, 1102, 1256
MlsI	TGGCCA	1 cut(s)	500
MluCI	AATT	9 cut(s)	155, 308, 624, 947, 998, 1011, 1210, 1222, 1305
MluNI	TGGCCA	1 cut(s)	500
Mly113I	GGCGCC	1 cut(s)	119
MlyI	GAGTC	2 cut(s)	191, 1382
Mox20I	TGGCCA	1 cut(s)	500
MroI	TCCGGA	1 cut(s)	85
MroXI	GAANNNNTTC	1 cut(s)	176
MscI	TGGCCA	1 cut(s)	500
MseI	TTAA	8 cut(s)	651, 659, 744, 825, 1151, 1209, 1347, 1404
Msp20I	TGGCCA	1 cut(s)	500
MspA1I	CMGCKG	1 cut(s)	1466
MspI	CCGG	6 cut(s)	26, 86, 116, 137, 222, 275
MspR9I	CCNGG	5 cut(s)	137, 332, 604, 642, 800
MvaI	CCWGG	4 cut(s)	332, 604, 642, 800
NarI	GGCGCC	1 cut(s)	119
NciI	CCSGG	1 cut(s)	137
NdeII	GATC	7 cut(s)	259, 373, 445, 718, 858, 1195, 1267
NlaIII	CATG	2 cut(s)	727, 1384
NlaIV	GGNNCC	6 cut(s)	93, 120, 135, 1099, 1254, 1339
NmeAIII	GCCGAG	2 cut(s)	345, 572
NmuCI	GTSAC	2 cut(s)	224, 835
NspI	RCATGY	1 cut(s)	727
NspV	TTCGAA	1 cut(s)	1446
PaeR7I	CTCGAG	2 cut(s)	512, 1185
PciSI	GCTCTTC	1 cut(s)	891
PcsI	WCGNNNNNNNCGW	3 cut(s)	75, 189, 236
PdmI	GAANNNNTTC	1 cut(s)	176
PfeI	GAWTC	4 cut(s)	265, 508, 697, 752
PflFI	GACNNNGTC	1 cut(s)	1381
PkrI	GCNGC	2 cut(s)	16, 1465
PleI	GAGTC	2 cut(s)	191, 1381
PluTI	GGCGCC	1 cut(s)	122
PmaCI	CACGTG	1 cut(s)	1265
PmlI	CACGTG	1 cut(s)	1265
PpsI	GAGTC	2 cut(s)	191, 1381
Ppu21I	YACGTR	1 cut(s)	1265
PshBI	ATTAAT	2 cut(s)	659, 1209
Psp6I	CCWGG	4 cut(s)	330, 602, 640, 798
PspCI	CACGTG	1 cut(s)	1265
PspEI	GGTNACC	1 cut(s)	872
PspGI	CCWGG	4 cut(s)	330, 602, 640, 798
PspN4I	GGNNCC	6 cut(s)	93, 120, 135, 1099, 1254, 1339
PspOMI	GGGCCC	1 cut(s)	1252
PspPI	GGNCC	5 cut(s)	63, 133, 1252, 1253, 1338
PspXI	VCTCGAGB	1 cut(s)	1185
PsrI	GAACNNNNNNTAC	2 cut(s)	628, 660
PstI	CTGCAG	1 cut(s)	556
PsuI	RGATCY	2 cut(s)	259, 373
PsyI	GACNNNGTC	1 cut(s)	1381
PvuII	CAGCTG	1 cut(s)	1466
RsaI	GTAC	8 cut(s)	236, 282, 646, 926, 935, 1023, 1065, 1295
RsaNI	GTAC	8 cut(s)	235, 281, 645, 925, 934, 1022, 1064, 1294
SalI	GTCGAC	2 cut(s)	664, 1375
SapI	GCTCTTC	1 cut(s)	891
SaqAI	TTAA	8 cut(s)	651, 659, 744, 825, 1151, 1209, 1347, 1404
SatI	GCNGC	2 cut(s)	15, 1464
Sau3AI	GATC	7 cut(s)	259, 373, 445, 718, 858, 1195, 1267
Sau96I	GGNCC	5 cut(s)	63, 133, 1252, 1253, 1338
SchI	GAGTC	2 cut(s)	191, 1382
ScrFI	CCNGG	5 cut(s)	137, 332, 604, 642, 800
SduI	GDGCHC	3 cut(s)	96, 1102, 1256
SfaNI	GCATC	2 cut(s)	294, 420
SfcI	CTRYAG	1 cut(s)	552
SfoI	GGCGCC	1 cut(s)	120
Sfr274I	CTCGAG	2 cut(s)	512, 1185
SfuI	TTCGAA	1 cut(s)	1446
SinI	GGWCC	1 cut(s)	133
SlaI	CTCGAG	2 cut(s)	512, 1185
SmlI	CTYRAG	2 cut(s)	512, 1185
SmoI	CTYRAG	2 cut(s)	512, 1185
Sse9I	AATT	9 cut(s)	155, 308, 624, 947, 998, 1011, 1210, 1222, 1305
SsiI	CCGC	8 cut(s)	12, 15, 21, 29, 46, 362, 1316, 1359
SspDI	GGCGCC	1 cut(s)	118
SspI	AATATT	1 cut(s)	981
StyD4I	CCNGG	5 cut(s)	135, 330, 602, 640, 798
StyI	CCWWGG	1 cut(s)	1256
TaaI	ACNGT	2 cut(s)	938, 1476
TaiI	ACGT	4 cut(s)	242, 966, 1267, 1324
TaqI	TCGA	9 cut(s)	183, 255, 444, 513, 665, 708, 1186, 1376, 1446
TasI	AATT	9 cut(s)	155, 308, 624, 947, 998, 1011, 1210, 1222, 1305
TatI	WGTACW	5 cut(s)	280, 924, 933, 1063, 1293
TauI	GCSGC	1 cut(s)	17
TfiI	GAWTC	4 cut(s)	265, 508, 697, 752
Tru1I	TTAA	8 cut(s)	651, 659, 744, 825, 1151, 1209, 1347, 1404
Tru9I	TTAA	8 cut(s)	651, 659, 744, 825, 1151, 1209, 1347, 1404
TscAI	CASTG	2 cut(s)	214, 800
TseFI	GTSAC	2 cut(s)	224, 835
TseI	GCWGC	1 cut(s)	1463
Tsp45I	GTSAC	2 cut(s)	224, 835
TspDTI	ATGAA	3 cut(s)	782, 843, 960
TspGWI	ACGGA	1 cut(s)	1039
TspRI	CASTG	2 cut(s)	214, 800
Tth111I	GACNNNGTC	1 cut(s)	1381
VpaK11BI	GGWCC	1 cut(s)	133
VspI	ATTAAT	2 cut(s)	659, 1209
XceI	RCATGY	1 cut(s)	727
XcmI	CCANNNNNNNNNTGG	1 cut(s)	493
XhoI	CTCGAG	2 cut(s)	512, 1185
XmiI	GTMKAC	4 cut(s)	125, 539, 665, 1376
XmnI	GAANNNNTTC	1 cut(s)	176
ZraI	GACGTC	1 cut(s)	964

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.