Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0001022

Physical Location & Seq

Genomic Coordinates Forward (+)

32527344 .. 32530714

Gene Structure 3371 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00410060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1323 bp

ATGGCCGAGGAAAATCAAAACGACGCAGTATCTACACCTCCGTCCTCTTTGGATCTCGGGCTTAACTTCGCCGGCTTGAATATCGGCGACCACAAATCGTCAATTTGCCAAGCTGAGCTCCAAATCACCGGCGAGAACAAATTCCTGTACGAACCTGAAGACTCGAATATCAGCGCTGTTACAACCGGCAACACGCCGTACACGTCGGCAAGTACTTTCGAGGATCTGCATTTATCAGAGGAGTTGTTGAAGGGTTTGTATGTGGAGATGGGGTTCAAGAAGCCGAGTAAAATCCAGGCAATTACATTGCCTATGATTTTGATGACTCCACACAAAGACTTGGTTGCTCAGGCTCACAATGGCTCAGGGAAGACGACTTGTTTCGTGCTCGGGATGCTCAGCCGTGTCGATCCGAATGTGAAATCTCCTCAGGCTCTCTGCATTTGTCCCACCAGAGAATTGGCACTTCAGAATGCGGAGGTTATTCGTAAGATGGGGAAGTACACAGGGATAAGTGTAGAGTGTGCTGTCCCAATGGAGAAGGAAAAATCTACACCAGTGAAGTACCGGCCTCTGGTATCAGCACAAATTGTGATTGGAACACCTGGTACAGTTAAGAACTTGATGTCATACAAGAAGCTGGGTGTAAGCGGTGTGAAGATTCTTGTTTTCGATGAAGCTGATCACATGCTGGCTGAGGATGGATTTAAAGATGATTCTTTAAGGATAAAAAAGGAGATAGAGAAATTTGACACTCACTGCCAGGTGCTCCTGTTTTCTGCTACATTCGATGAAACAGTCAGAAATTTCATCTCAAGGGTGGTGAAGGACAAGAATGAACTATTTGTTAAGAAAGAAGAGCTATCTTTGGCAGCTGTGAAGCAGTACAAGGTCTACTGCCCTGATGAACTAACCAAAATTGATGTGATCAAAACCAAGATATTCGACCTAGGGGAGAACATTGGACAGCGAATCATTTTTGTAGGGTTAAAAGCTAGTGCAAGAATGTTGCATAAACAACTTCATGAGGATGGTTATGCAGTTACAAATGTTCATGGTGCCCTCACTCCTGAACATAGAGACAAGACGATTAAGGAATTCAGAGAGGGTTACACCCAAGTTCTTATTGCAACTGACATGCTTGCTCGAGGCTTTGACAGCCAGCAGGTTAACTGTGTTGTCAATTATGATCTTCCAATAAAGTATCAAGCTTGGTCTAGGAAGCAAGCAGCTCCAGAGCCTGATTATGAGGTGTACTTGCATAGATGTGGTCGGGCAGGGCGTTTTGGCCGCAAGGGTAAGTCATCTGATATTCTGATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005730 GO:0005737 GO:0005886 GO:0006139 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0008026 GO:0008104 GO:0008150 GO:0008152 GO:0008186 GO:0009266 GO:0009408 GO:0009409 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0010501 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0016973 GO:0017111 GO:0031503 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0033036 GO:0033993 GO:0034613 GO:0034641 GO:0042221 GO:0042623 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0050657 GO:0050658 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0070013 GO:0070035 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071944 GO:0090304 GO:0097305 GO:0140098 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

440

Amino Acids

49.06

Weight (kDa)

7.15

Isoelectric Point (pI)

30.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	97 - 269	4.1e-37	DEAD/DEAH box helicase
ResIII	PF04851	109 - 264	3e-08	Type III restriction enzyme, res subunit
Helicase_C	PF00271	313 - 430	2.1e-23	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001022)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53110
fragaria_vesca	FvH4_6g17230 FvH4_6g17230 FvH4_6g17230 FvH4_6g17280 FvH4_6g17280
malus_domestica	MD12G1102600.v1.1 MD14G1096800.v1.1
prunus_persica	Prupe.3G009100_v2.0.a1 Prupe.7G122600_v2.0.a1
pyrus_communis	pycom03g08760 pycom12g10060 pycom14g09450
rosa_chinensis	RchiOBHm_Chr3g0471311 RchiOBHm_Chr3g0471321 RchiOBHm_Chr3g0471361 RchiOBHm_Chr3g0471391
rosa_laevigata	RLG00000024181 RLG00000024187 RLG00000024188
rosa_multiflora	Rmu_sc0006582.1_g000015 Rmu_sc0006582.1_g000018 Rmu_sc0009082.1_g000003 Rmu_sc0010513.1_g000003 Rmu_sc0015755.1_g000002 Rmu_sc0030425.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409980 Rroxscaffold_6G00410000 Rroxscaffold_6G00410060 Rroxscaffold_6G00410080
rosa_rugosa	Rorug03G0117100 Rorug03G0117100 Rorug03G0117100 Rorug03G0117400 Rorug03G0117500 Rorug03G0117500
rosa_samantha	Rh3AG166500 Rh3AG166600 Rh3AG166700 Rh3AG167100 Rh3BG191900 Rh3BG192000 Rh3BG192100 Rh3BG192400 Rh3BG192500 Rh3BG192800 Rh3CG182200 Rh3CG182300 Rh3CG182400 Rh3CG182700 Rh3CG182800 Rh3CG183200 Rh3DG182700 Rh3DG183100 Rh3DG183200 Rh3DG183700 Rh3DG183800
rosa_wichuraiana	Rw3G015670 Rw3G015680 Rw3G015730 Rw3G015760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1156
AccB1I	GGYRCC	1 cut(s)	1058
AccI	GTMKAC	1 cut(s)	894
AciI	CCGC	3 cut(s)	476, 651, 1291
AclWI	GGATC	3 cut(s)	60, 231, 404
AcoI	YGGCCR	2 cut(s)	3, 1288
AcsI	RAATTY	4 cut(s)	140, 746, 805, 1097
AcuI	CTGAAG	2 cut(s)	177, 452
AfaI	GTAC	8 cut(s)	149, 200, 214, 503, 566, 610, 887, 1256
AfeI	AGCGCT	1 cut(s)	175
AfiI	CCNNNNNNNGG	1 cut(s)	574
AflIII	ACRYGT	1 cut(s)	201
AgsI	TTSAA	3 cut(s)	79, 250, 277
AjiI	CACGTC	1 cut(s)	204
AjnI	CCWGG	3 cut(s)	294, 604, 762
AloI	GAACNNNNNNTCC	2 cut(s)	257, 289
AluBI	AGCT	9 cut(s)	113, 118, 640, 680, 862, 875, 995, 1211, 1232
AluI	AGCT	9 cut(s)	113, 118, 640, 680, 862, 875, 995, 1211, 1232
Alw21I	GWGCWC	3 cut(s)	120, 390, 771
Alw26I	GTCTC	1 cut(s)	1074
AlwI	GGATC	3 cut(s)	60, 231, 404
AlwNI	CAGNNNCTG	1 cut(s)	1241
Ama87I	CYCGRG	3 cut(s)	56, 389, 1146
Aor51HI	AGCGCT	1 cut(s)	175
AoxI	GGCC	3 cut(s)	3, 569, 1288
ApeKI	GCWGC	2 cut(s)	872, 1229
ApoI	RAATTY	4 cut(s)	140, 746, 805, 1097
Asp700I	GAANNNNTTC	1 cut(s)	140
AspA2I	CCTAGG	1 cut(s)	949
AspLEI	GCGC	1 cut(s)	176
AsuHPI	GGTGA	2 cut(s)	118, 835
AvaI	CYCGRG	3 cut(s)	56, 389, 1146
AvrII	CCTAGG	1 cut(s)	949
AxyI	CCTNAGG	1 cut(s)	429
BaeGI	GKGCMC	1 cut(s)	1063
BanI	GGYRCC	1 cut(s)	1058
BanII	GRGCYC	1 cut(s)	120
BbsI	GAAGAC	2 cut(s)	165, 377
Bbv12I	GWGCWC	3 cut(s)	120, 390, 771
BbvCI	CCTCAGC	1 cut(s)	696
BbvI	GCAGC	2 cut(s)	884, 1241
BccI	CCATC	4 cut(s)	262, 487, 695, 1025
BceAI	ACGGC	2 cut(s)	181, 387
BciT130I	CCWGG	3 cut(s)	296, 606, 764
BclI	TGATCA	2 cut(s)	682, 927
BcoDI	GTCTC	1 cut(s)	1074
BfaI	CTAG	3 cut(s)	950, 996, 1218
BfoI	RGCGCY	1 cut(s)	177
BfuAI	ACCTGC	1 cut(s)	1156
BisI	GCNGC	3 cut(s)	873, 1230, 1291
BlnI	CCTAGG	1 cut(s)	949
BlpI	GCTNAGC	2 cut(s)	114, 398
BlsI	GCNGC	3 cut(s)	874, 1231, 1292
BmcAI	AGTACT	1 cut(s)	214
Bme1390I	CCNGG	3 cut(s)	296, 606, 764
BmeT110I	CYCGRG	3 cut(s)	56, 389, 1146
BmgBI	CACGTC	1 cut(s)	204
BmiI	GGNNCC	1 cut(s)	1060
BmrFI	CCNGG	3 cut(s)	296, 606, 764
BmsI	GCATC	1 cut(s)	384
BpiI	GAAGAC	2 cut(s)	165, 377
BpmI	CTGGAG	1 cut(s)	1218
Bpu10I	CCTNAGC	3 cut(s)	348, 364, 696
Bpu1102I	GCTNAGC	2 cut(s)	114, 398
BpuEI	CTTGAG	1 cut(s)	799
BsaJI	CCNNGG	2 cut(s)	6, 949
BsaXI	ACNNNNNCTCC	2 cut(s)	257, 287
Bsc4I	CCNNNNNNNGG	1 cut(s)	574
Bse118I	RCCGGY	4 cut(s)	71, 128, 185, 567
Bse1I	ACTGG	1 cut(s)	557
Bse21I	CCTNAGG	1 cut(s)	429
Bse3DI	GCAATG	1 cut(s)	305
BseBI	CCWGG	3 cut(s)	296, 606, 764
BseDI	CCNNGG	2 cut(s)	6, 949
BseGI	GGATG	3 cut(s)	399, 706, 1036
BseLI	CCNNNNNNNGG	1 cut(s)	574
BseMI	GCAATG	1 cut(s)	305
BseMII	CTCAG	6 cut(s)	105, 362, 378, 412, 443, 687
BseNI	ACTGG	1 cut(s)	557
BseRI	GAGGAG	2 cut(s)	254, 417
BseSI	GKGCMC	1 cut(s)	1063
BseXI	GCAGC	2 cut(s)	884, 1241
BseYI	CCCAGC	1 cut(s)	640
BshFI	GGCC	3 cut(s)	5, 571, 1290
BshNI	GGYRCC	1 cut(s)	1058
BsiHKAI	GWGCWC	3 cut(s)	120, 390, 771
BsiHKCI	CYCGRG	3 cut(s)	56, 389, 1146
BsiSI	CCGG	4 cut(s)	72, 129, 186, 568
BslFI	GGGAC	2 cut(s)	432, 515
BslI	CCNNNNNNNGG	1 cut(s)	574
BsmAI	GTCTC	1 cut(s)	1074
BsmFI	GGGAC	2 cut(s)	432, 515
BsmI	GAATGC	1 cut(s)	478
BsnI	GGCC	3 cut(s)	5, 571, 1290
BsoBI	CYCGRG	3 cut(s)	56, 389, 1146
Bsp1286I	GDGCHC	4 cut(s)	120, 390, 771, 1063
Bsp143I	GATC	7 cut(s)	52, 223, 409, 682, 927, 1189, 1317
Bsp1720I	GCTNAGC	2 cut(s)	114, 398
BspACI	CCGC	3 cut(s)	476, 651, 1291
BspANI	GGCC	3 cut(s)	5, 571, 1290
BspCNI	CTCAG	6 cut(s)	106, 361, 377, 411, 442, 688
BspHI	TCATGA	1 cut(s)	1024
BspLI	GGNNCC	1 cut(s)	1060
BspMI	ACCTGC	1 cut(s)	1156
BspPI	GGATC	3 cut(s)	60, 231, 404
BspQI	GCTCTTC	1 cut(s)	852
BspT107I	GGYRCC	1 cut(s)	1058
BsrDI	GCAATG	1 cut(s)	305
BsrFI	RCCGGY	4 cut(s)	71, 128, 185, 567
BsrI	ACTGG	1 cut(s)	557
BssAI	RCCGGY	4 cut(s)	71, 128, 185, 567
BssECI	CCNNGG	2 cut(s)	6, 949
BssMI	GATC	7 cut(s)	52, 223, 409, 682, 927, 1189, 1317
BssT1I	CCWWGG	1 cut(s)	949
Bst2UI	CCWGG	3 cut(s)	296, 606, 764
Bst4CI	ACNGT	3 cut(s)	613, 799, 1175
Bst6I	CTCTTC	1 cut(s)	852
BstC8I	GCNNGC	5 cut(s)	73, 693, 1143, 1163, 1227
BstDEI	CTNAG	6 cut(s)	114, 348, 364, 398, 429, 696
BstF5I	GGATG	3 cut(s)	399, 706, 1036
BstH2I	RGCGCY	1 cut(s)	177
BstHHI	GCGC	1 cut(s)	176
BstKTI	GATC	7 cut(s)	55, 226, 412, 685, 930, 1192, 1320
BstMAI	GTCTC	1 cut(s)	1074
BstMBI	GATC	7 cut(s)	52, 223, 409, 682, 927, 1189, 1317
BstMWI	GCNNNNNNNGC	2 cut(s)	394, 1158
BstNI	CCWGG	3 cut(s)	296, 606, 764
BstNSI	RCATGY	2 cut(s)	691, 1141
BstSCI	CCNGG	3 cut(s)	294, 604, 762
BstSLI	GKGCMC	1 cut(s)	1063
BstV1I	GCAGC	2 cut(s)	884, 1241
BstV2I	GAAGAC	2 cut(s)	165, 377
BstX2I	RGATCY	2 cut(s)	52, 223
BstXI	CCANNNNNNTGG	1 cut(s)	460
BstYI	RGATCY	2 cut(s)	52, 223
Bsu36I	CCTNAGG	1 cut(s)	429
BsuRI	GGCC	3 cut(s)	5, 571, 1290
BtrI	CACGTC	1 cut(s)	204
BtsCI	GGATG	3 cut(s)	399, 706, 1036
BtsI	GCAGTG	1 cut(s)	757
BtsIMutI	CAGTG	2 cut(s)	564, 757
BveI	ACCTGC	1 cut(s)	1156
Cac8I	GCNNGC	5 cut(s)	73, 693, 1143, 1163, 1227
CaiI	CAGNNNCTG	1 cut(s)	1241
CciI	TCATGA	1 cut(s)	1024
CfoI	GCGC	1 cut(s)	176
Cfr10I	RCCGGY	4 cut(s)	71, 128, 185, 567
CseI	GACGC	1 cut(s)	32
CsiI	ACCWGGT	1 cut(s)	604
Csp6I	GTAC	8 cut(s)	148, 199, 213, 502, 565, 609, 886, 1255
CviAII	CATG	4 cut(s)	688, 1025, 1055, 1138
CviQI	GTAC	8 cut(s)	148, 199, 213, 502, 565, 609, 886, 1255
DdeI	CTNAG	6 cut(s)	114, 348, 364, 398, 429, 696
DpnI	GATC	7 cut(s)	54, 225, 411, 684, 929, 1191, 1319
DpnII	GATC	7 cut(s)	52, 223, 409, 682, 927, 1189, 1317
DraI	TTTAAA	1 cut(s)	709
EaeI	YGGCCR	2 cut(s)	3, 1288
Eam1104I	CTCTTC	1 cut(s)	852
EarI	CTCTTC	1 cut(s)	852
Ecl136II	GAGCTC	1 cut(s)	118
Eco130I	CCWWGG	1 cut(s)	949
Eco24I	GRGCYC	1 cut(s)	120
Eco47III	AGCGCT	1 cut(s)	175
Eco53kI	GAGCTC	1 cut(s)	118
Eco57I	CTGAAG	2 cut(s)	177, 452
Eco81I	CCTNAGG	1 cut(s)	429
Eco88I	CYCGRG	3 cut(s)	56, 389, 1146
EcoICRI	GAGCTC	1 cut(s)	118
EcoRI	GAATTC	1 cut(s)	1097
EcoRII	CCWGG	3 cut(s)	294, 604, 762
EcoT14I	CCWWGG	1 cut(s)	949
EcoT38I	GRGCYC	1 cut(s)	120
ErhI	CCWWGG	1 cut(s)	949
FaeI	CATG	4 cut(s)	691, 1028, 1058, 1141
FaqI	GGGAC	2 cut(s)	432, 515
FatI	CATG	4 cut(s)	687, 1024, 1054, 1137
FbaI	TGATCA	2 cut(s)	682, 927
FblI	GTMKAC	1 cut(s)	894
Fnu4HI	GCNGC	3 cut(s)	873, 1230, 1291
FokI	GGATG	3 cut(s)	406, 713, 1043
FriOI	GRGCYC	1 cut(s)	120
Fsp4HI	GCNGC	3 cut(s)	873, 1230, 1291
FspBI	CTAG	3 cut(s)	950, 996, 1218
GlaI	GCGC	1 cut(s)	175
GluI	GCNGC	3 cut(s)	873, 1230, 1291
GsaI	CCCAGC	1 cut(s)	644
GsuI	CTGGAG	1 cut(s)	1218
HaeII	RGCGCY	1 cut(s)	177
HaeIII	GGCC	3 cut(s)	5, 571, 1290
HapII	CCGG	4 cut(s)	72, 129, 186, 568
HgaI	GACGC	1 cut(s)	32
HhaI	GCGC	1 cut(s)	176
Hin1II	CATG	4 cut(s)	691, 1028, 1058, 1141
Hin6I	GCGC	1 cut(s)	174
HinP1I	GCGC	1 cut(s)	174
HincII	GTYRAC	1 cut(s)	1171
HindII	GTYRAC	1 cut(s)	1171
HindIII	AAGCTT	1 cut(s)	1209
HinfI	GANTC	5 cut(s)	161, 325, 661, 716, 972
HpaI	GTTAAC	1 cut(s)	1171
HpaII	CCGG	4 cut(s)	72, 129, 186, 568
HphI	GGTGA	2 cut(s)	118, 835
Hpy166II	GTNNAC	5 cut(s)	201, 504, 895, 1171, 1255
Hpy188I	TCNGA	8 cut(s)	238, 414, 471, 803, 1103, 1309, 1317, 1322
Hpy188III	TCNNGA	5 cut(s)	277, 391, 1025, 1070, 1235
Hpy8I	GTNNAC	5 cut(s)	201, 504, 895, 1171, 1255
Hpy99I	CGWCG	2 cut(s)	26, 208
HpyAV	CCTTC	3 cut(s)	244, 535, 820
HpyCH4III	ACNGT	3 cut(s)	613, 799, 1175
HpyCH4IV	ACGT	1 cut(s)	203
HpyCH4V	TGCA	7 cut(s)	229, 441, 1001, 1012, 1040, 1130, 1261
HpyF10VI	GCNNNNNNNGC	2 cut(s)	394, 1158
HpyF3I	CTNAG	6 cut(s)	114, 348, 364, 398, 429, 696
HpySE526I	ACGT	1 cut(s)	203
Hsp92II	CATG	4 cut(s)	691, 1028, 1058, 1141
HspAI	GCGC	1 cut(s)	174
KroI	GCCGGC	1 cut(s)	71
KroNI	GCCGGC	1 cut(s)	73
Ksp22I	TGATCA	2 cut(s)	682, 927
KspAI	GTTAAC	1 cut(s)	1171
Kzo9I	GATC	7 cut(s)	52, 223, 409, 682, 927, 1189, 1317
LguI	GCTCTTC	1 cut(s)	852
LmnI	GCTCC	3 cut(s)	123, 774, 1237
Lsp1109I	GCAGC	2 cut(s)	884, 1241
LweI	GCATC	1 cut(s)	384
MabI	ACCWGGT	1 cut(s)	604
MaeI	CTAG	3 cut(s)	950, 996, 1218
MaeII	ACGT	1 cut(s)	203
MaeIII	GTNAC	3 cut(s)	178, 1042, 1109
MalI	GATC	7 cut(s)	54, 225, 411, 684, 929, 1191, 1319
MboI	GATC	7 cut(s)	52, 223, 409, 682, 927, 1189, 1317
MboII	GAAGA	5 cut(s)	170, 382, 670, 869, 1184
MflI	RGATCY	2 cut(s)	52, 223
MhlI	GDGCHC	4 cut(s)	120, 390, 771, 1063
MlyI	GAGTC	2 cut(s)	155, 319
MroNI	GCCGGC	1 cut(s)	71
MroXI	GAANNNNTTC	1 cut(s)	140
MseI	TTAA	8 cut(s)	63, 615, 708, 722, 849, 989, 1092, 1170
MslI	CAYNNNNRTG	2 cut(s)	1029, 1266
MspA1I	CMGCKG	1 cut(s)	875
MspI	CCGG	4 cut(s)	72, 129, 186, 568
MspR9I	CCNGG	3 cut(s)	296, 606, 764
Mva1269I	GAATGC	1 cut(s)	478
MvaI	CCWGG	3 cut(s)	296, 606, 764
MwoI	GCNNNNNNNGC	2 cut(s)	394, 1158
NaeI	GCCGGC	1 cut(s)	73
NdeII	GATC	7 cut(s)	52, 223, 409, 682, 927, 1189, 1317
NgoMIV	GCCGGC	1 cut(s)	71
NlaIII	CATG	4 cut(s)	691, 1028, 1058, 1141
NlaIV	GGNNCC	1 cut(s)	1060
NmeAIII	GCCGAG	2 cut(s)	31, 309
NspI	RCATGY	2 cut(s)	691, 1141
PaeR7I	CTCGAG	1 cut(s)	1146
PagI	TCATGA	1 cut(s)	1024
PciSI	GCTCTTC	1 cut(s)	852
PcsI	WCGNNNNNNNCGW	2 cut(s)	200, 1279
PctI	GAATGC	1 cut(s)	478
PdiI	GCCGGC	1 cut(s)	73
PdmI	GAANNNNTTC	1 cut(s)	140
PfeI	GAWTC	3 cut(s)	661, 716, 972
PkrI	GCNGC	3 cut(s)	874, 1231, 1292
PleI	GAGTC	2 cut(s)	155, 319
PpsI	GAGTC	2 cut(s)	155, 319
Psp124BI	GAGCTC	1 cut(s)	120
Psp6I	CCWGG	3 cut(s)	294, 604, 762
PspFI	CCCAGC	1 cut(s)	640
PspGI	CCWGG	3 cut(s)	294, 604, 762
PspN4I	GGNNCC	1 cut(s)	1060
PspXI	VCTCGAGB	1 cut(s)	1146
PsrI	GAACNNNNNNTAC	2 cut(s)	592, 624
PstNI	CAGNNNCTG	1 cut(s)	1241
PsuI	RGATCY	2 cut(s)	52, 223
PvuII	CAGCTG	1 cut(s)	875
RsaI	GTAC	8 cut(s)	149, 200, 214, 503, 566, 610, 887, 1256
RsaNI	GTAC	8 cut(s)	148, 199, 213, 502, 565, 609, 886, 1255
RseI	CAYNNNNRTG	2 cut(s)	1029, 1266
SacI	GAGCTC	1 cut(s)	120
SapI	GCTCTTC	1 cut(s)	852
SaqAI	TTAA	8 cut(s)	63, 615, 708, 722, 849, 989, 1092, 1170
SatI	GCNGC	3 cut(s)	873, 1230, 1291
Sau3AI	GATC	7 cut(s)	52, 223, 409, 682, 927, 1189, 1317
ScaI	AGTACT	1 cut(s)	214
SchI	GAGTC	2 cut(s)	155, 319
ScrFI	CCNGG	3 cut(s)	296, 606, 764
SduI	GDGCHC	4 cut(s)	120, 390, 771, 1063
SexAI	ACCWGGT	1 cut(s)	604
SfaNI	GCATC	1 cut(s)	384
Sfr274I	CTCGAG	1 cut(s)	1146
SgrAI	CRCCGGYG	1 cut(s)	128
SlaI	CTCGAG	1 cut(s)	1146
SmiMI	CAYNNNNRTG	2 cut(s)	1029, 1266
SmlI	CTYRAG	2 cut(s)	814, 1146
SmoI	CTYRAG	2 cut(s)	814, 1146
SsiI	CCGC	3 cut(s)	476, 651, 1291
SspMI	CTAG	3 cut(s)	950, 996, 1218
SstI	GAGCTC	1 cut(s)	120
StyD4I	CCNGG	3 cut(s)	294, 604, 762
StyI	CCWWGG	1 cut(s)	949
TaaI	ACNGT	3 cut(s)	613, 799, 1175
TaiI	ACGT	1 cut(s)	206
TaqI	TCGA	7 cut(s)	164, 219, 408, 672, 789, 945, 1147
TatI	WGTACW	4 cut(s)	212, 501, 885, 1254
TauI	GCSGC	1 cut(s)	1293
TfiI	GAWTC	3 cut(s)	661, 716, 972
Tru1I	TTAA	8 cut(s)	63, 615, 708, 722, 849, 989, 1092, 1170
Tru9I	TTAA	8 cut(s)	63, 615, 708, 722, 849, 989, 1092, 1170
TscAI	CASTG	2 cut(s)	564, 764
TseI	GCWGC	2 cut(s)	872, 1229
TspDTI	ATGAA	7 cut(s)	690, 799, 807, 852, 921, 1013, 1043
TspGWI	ACGGA	1 cut(s)	30
TspRI	CASTG	2 cut(s)	564, 764
XapI	RAATTY	4 cut(s)	140, 746, 805, 1097
XceI	RCATGY	2 cut(s)	691, 1141
XcmI	CCANNNNNNNNNTGG	1 cut(s)	457
XhoI	CTCGAG	1 cut(s)	1146
XmaJI	CCTAGG	1 cut(s)	949
XmiI	GTMKAC	1 cut(s)	894
XmnI	GAANNNNTTC	1 cut(s)	140
XspI	CTAG	3 cut(s)	950, 996, 1218
ZrmI	AGTACT	1 cut(s)	214

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.