IQ-domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF4005 | PF13178 | 384 - 482 | 8.9e-29 | Protein of unknown function (DUF4005) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1576 |
| Acc36I | ACCTGC | 1 cut(s) | 1576 |
| AccBSI | CCGCTC | 1 cut(s) | 15 |
| AccI | GTMKAC | 1 cut(s) | 108 |
| AccII | CGCG | 2 cut(s) | 1005, 1156 |
| AclWI | GGATC | 5 cut(s) | 672, 948, 1137, 1153, 1166 |
| AcoI | YGGCCR | 1 cut(s) | 303 |
| AcsI | RAATTY | 1 cut(s) | 1137 |
| AcuI | CTGAAG | 1 cut(s) | 604 |
| AcyI | GRCGYC | 1 cut(s) | 195 |
| AdeI | CACNNNGTG | 1 cut(s) | 505 |
| AfaI | GTAC | 6 cut(s) | 284, 376, 951, 1184, 1258, 1534 |
| AgeI | ACCGGT | 2 cut(s) | 955, 1019 |
| AgsI | TTSAA | 5 cut(s) | 463, 659, 936, 1365, 1471 |
| AhlI | ACTAGT | 1 cut(s) | 487 |
| AjiI | CACGTC | 1 cut(s) | 788 |
| AjnI | CCWGG | 1 cut(s) | 825 |
| AleI | CACNNNNGTG | 1 cut(s) | 41 |
| AluBI | AGCT | 8 cut(s) | 53, 404, 545, 815, 932, 1103, 1209, 1394 |
| AluI | AGCT | 8 cut(s) | 53, 404, 545, 815, 932, 1103, 1209, 1394 |
| Alw21I | GWGCWC | 2 cut(s) | 642, 1348 |
| Alw26I | GTCTC | 9 cut(s) | 133, 316, 597, 765, 778, 855, 874, 1341, 1545 |
| Alw44I | GTGCAC | 1 cut(s) | 1344 |
| AlwI | GGATC | 5 cut(s) | 672, 948, 1137, 1153, 1166 |
| Ama87I | CYCGRG | 2 cut(s) | 1012, 1370 |
| AoxI | GGCC | 3 cut(s) | 303, 1046, 1358 |
| ApaLI | GTGCAC | 1 cut(s) | 1344 |
| ApeKI | GCWGC | 4 cut(s) | 401, 1283, 1426, 1432 |
| ApoI | RAATTY | 1 cut(s) | 1137 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1429, 1461 |
| AsiGI | ACCGGT | 2 cut(s) | 955, 1019 |
| AspLEI | GCGC | 1 cut(s) | 217 |
| AspS9I | GGNCC | 1 cut(s) | 1065 |
| AsuHPI | GGTGA | 4 cut(s) | 193, 815, 1047, 1557 |
| AvaI | CYCGRG | 2 cut(s) | 1012, 1370 |
| AvaII | GGWCC | 1 cut(s) | 1065 |
| BaeGI | GKGCMC | 1 cut(s) | 1348 |
| BamHI | GGATCC | 1 cut(s) | 1158 |
| BauI | CACGAG | 1 cut(s) | 564 |
| BbsI | GAAGAC | 2 cut(s) | 126, 191 |
| Bbv12I | GWGCWC | 2 cut(s) | 642, 1348 |
| BbvI | GCAGC | 4 cut(s) | 413, 1270, 1413, 1444 |
| BccI | CCATC | 7 cut(s) | 593, 894, 898, 1066, 1117, 1436, 1587 |
| BceAI | ACGGC | 4 cut(s) | 26, 1020, 1373, 1418 |
| BciT130I | CCWGG | 1 cut(s) | 827 |
| BcoDI | GTCTC | 9 cut(s) | 133, 316, 597, 765, 778, 855, 874, 1341, 1545 |
| BcuI | ACTAGT | 1 cut(s) | 487 |
| BfmI | CTRYAG | 2 cut(s) | 855, 1222 |
| BfuAI | ACCTGC | 1 cut(s) | 1576 |
| BglII | AGATCT | 1 cut(s) | 1214 |
| BisI | GCNGC | 6 cut(s) | 318, 402, 1284, 1427, 1430, 1433 |
| BlsI | GCNGC | 6 cut(s) | 319, 403, 1285, 1428, 1431, 1434 |
| Bme1390I | CCNGG | 1 cut(s) | 827 |
| Bme18I | GGWCC | 1 cut(s) | 1065 |
| BmeT110I | CYCGRG | 2 cut(s) | 1012, 1370 |
| BmgBI | CACGTC | 1 cut(s) | 788 |
| BmgT120I | GGNCC | 1 cut(s) | 1065 |
| BmiI | GGNNCC | 1 cut(s) | 1160 |
| BmrFI | CCNGG | 1 cut(s) | 827 |
| BmsI | GCATC | 2 cut(s) | 299, 329 |
| BpiI | GAAGAC | 2 cut(s) | 126, 191 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1320 |
| BpuEI | CTTGAG | 1 cut(s) | 1231 |
| Bsa29I | ATCGAT | 1 cut(s) | 978 |
| BsaHI | GRCGYC | 1 cut(s) | 195 |
| BsaI | GGTCTC | 2 cut(s) | 874, 1341 |
| BsaJI | CCNNGG | 5 cut(s) | 917, 969, 1003, 1154, 1349 |
| BsaWI | WCCGGW | 4 cut(s) | 178, 955, 1019, 1332 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 319, 349, 1096, 1126, 1450, 1480 |
| Bse118I | RCCGGY | 3 cut(s) | 301, 955, 1019 |
| Bse1I | ACTGG | 2 cut(s) | 424, 1415 |
| Bse3DI | GCAATG | 3 cut(s) | 702, 759, 1286 |
| BseBI | CCWGG | 1 cut(s) | 827 |
| BseCI | ATCGAT | 1 cut(s) | 978 |
| BseDI | CCNNGG | 5 cut(s) | 917, 969, 1003, 1154, 1349 |
| BseGI | GGATG | 4 cut(s) | 331, 724, 909, 1447 |
| BseMI | GCAATG | 3 cut(s) | 702, 759, 1286 |
| BseMII | CTCAG | 2 cut(s) | 1352, 1527 |
| BseNI | ACTGG | 2 cut(s) | 424, 1415 |
| BseSI | GKGCMC | 1 cut(s) | 1348 |
| BseXI | GCAGC | 4 cut(s) | 413, 1270, 1413, 1444 |
| Bsh1236I | CGCG | 2 cut(s) | 1005, 1156 |
| BshFI | GGCC | 3 cut(s) | 305, 1048, 1360 |
| BshTI | ACCGGT | 2 cut(s) | 955, 1019 |
| BshVI | ATCGAT | 1 cut(s) | 978 |
| BsiHKAI | GWGCWC | 2 cut(s) | 642, 1348 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1012, 1370 |
| BsiSI | CCGG | 8 cut(s) | 179, 192, 212, 302, 956, 1020, 1115, 1333 |
| BsmAI | GTCTC | 9 cut(s) | 133, 316, 597, 765, 778, 855, 874, 1341, 1545 |
| BsmBI | CGTCTC | 4 cut(s) | 133, 316, 778, 855 |
| BsnI | GGCC | 3 cut(s) | 305, 1048, 1360 |
| Bso31I | GGTCTC | 2 cut(s) | 874, 1341 |
| BsoBI | CYCGRG | 2 cut(s) | 1012, 1370 |
| Bsp1286I | GDGCHC | 2 cut(s) | 642, 1348 |
| BspANI | GGCC | 3 cut(s) | 305, 1048, 1360 |
| BspCNI | CTCAG | 2 cut(s) | 1351, 1528 |
| BspDI | ATCGAT | 1 cut(s) | 978 |
| BspFNI | CGCG | 2 cut(s) | 1005, 1156 |
| BspHI | TCATGA | 1 cut(s) | 169 |
| BspLI | GGNNCC | 1 cut(s) | 1160 |
| BspMI | ACCTGC | 1 cut(s) | 1576 |
| BspPI | GGATC | 5 cut(s) | 672, 948, 1137, 1153, 1166 |
| BspQI | GCTCTTC | 2 cut(s) | 5, 439 |
| BspTNI | GGTCTC | 2 cut(s) | 874, 1341 |
| BsrBI | CCGCTC | 1 cut(s) | 15 |
| BsrDI | GCAATG | 3 cut(s) | 702, 759, 1286 |
| BsrFI | RCCGGY | 3 cut(s) | 301, 955, 1019 |
| BsrI | ACTGG | 2 cut(s) | 424, 1415 |
| BssAI | RCCGGY | 3 cut(s) | 301, 955, 1019 |
| BssECI | CCNNGG | 5 cut(s) | 917, 969, 1003, 1154, 1349 |
| BssNI | GRCGYC | 1 cut(s) | 195 |
| BssSI | CACGAG | 1 cut(s) | 564 |
| BssT1I | CCWWGG | 1 cut(s) | 1349 |
| Bst2BI | CACGAG | 1 cut(s) | 564 |
| Bst2UI | CCWGG | 1 cut(s) | 827 |
| Bst4CI | ACNGT | 5 cut(s) | 256, 310, 918, 970, 993 |
| Bst6I | CTCTTC | 5 cut(s) | 5, 131, 439, 870, 1528 |
| BstACI | GRCGYC | 1 cut(s) | 195 |
| BstC8I | GCNNGC | 3 cut(s) | 303, 516, 543 |
| BstDEI | CTNAG | 3 cut(s) | 1320, 1338, 1536 |
| BstDSI | CCRYGG | 4 cut(s) | 917, 969, 1003, 1154 |
| BstF5I | GGATG | 4 cut(s) | 331, 724, 909, 1447 |
| BstFNI | CGCG | 2 cut(s) | 1005, 1156 |
| BstHHI | GCGC | 1 cut(s) | 217 |
| BstMAI | GTCTC | 9 cut(s) | 133, 316, 597, 765, 778, 855, 874, 1341, 1545 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 446, 455, 1280, 1432 |
| BstNI | CCWGG | 1 cut(s) | 827 |
| BstSCI | CCNGG | 1 cut(s) | 825 |
| BstSFI | CTRYAG | 2 cut(s) | 855, 1222 |
| BstSLI | GKGCMC | 1 cut(s) | 1348 |
| BstUI | CGCG | 2 cut(s) | 1005, 1156 |
| BstV1I | GCAGC | 4 cut(s) | 413, 1270, 1413, 1444 |
| BstV2I | GAAGAC | 2 cut(s) | 126, 191 |
| BstX2I | RGATCY | 3 cut(s) | 677, 1158, 1214 |
| BstYI | RGATCY | 3 cut(s) | 677, 1158, 1214 |
| Bsu15I | ATCGAT | 1 cut(s) | 978 |
| BsuRI | GGCC | 3 cut(s) | 305, 1048, 1360 |
| BsuTUI | ATCGAT | 1 cut(s) | 978 |
| BtgI | CCRYGG | 4 cut(s) | 917, 969, 1003, 1154 |
| BtrI | CACGTC | 1 cut(s) | 788 |
| BtsCI | GGATG | 4 cut(s) | 331, 724, 909, 1447 |
| BtsI | GCAGTG | 1 cut(s) | 36 |
| BtsIMutI | CAGTG | 1 cut(s) | 36 |
| BveI | ACCTGC | 1 cut(s) | 1576 |
| Cac8I | GCNNGC | 3 cut(s) | 303, 516, 543 |
| CciI | TCATGA | 1 cut(s) | 169 |
| CfoI | GCGC | 1 cut(s) | 217 |
| Cfr10I | RCCGGY | 3 cut(s) | 301, 955, 1019 |
| Cfr13I | GGNCC | 1 cut(s) | 1065 |
| Cfr42I | CCGCGG | 2 cut(s) | 1006, 1157 |
| ClaI | ATCGAT | 1 cut(s) | 978 |
| CseI | GACGC | 3 cut(s) | 184, 215, 296 |
| CsiI | ACCWGGT | 1 cut(s) | 825 |
| Csp6I | GTAC | 6 cut(s) | 283, 375, 950, 1183, 1257, 1533 |
| CspAI | ACCGGT | 2 cut(s) | 955, 1019 |
| CviAII | CATG | 4 cut(s) | 95, 170, 682, 1300 |
| CviQI | GTAC | 6 cut(s) | 283, 375, 950, 1183, 1257, 1533 |
| DdeI | CTNAG | 3 cut(s) | 1320, 1338, 1536 |
| DraIII | CACNNNGTG | 1 cut(s) | 505 |
| EaeI | YGGCCR | 1 cut(s) | 303 |
| Eam1104I | CTCTTC | 5 cut(s) | 5, 131, 439, 870, 1528 |
| EarI | CTCTTC | 5 cut(s) | 5, 131, 439, 870, 1528 |
| EciI | GGCGGA | 1 cut(s) | 304 |
| Eco130I | CCWWGG | 1 cut(s) | 1349 |
| Eco147I | AGGCCT | 1 cut(s) | 1048 |
| Eco31I | GGTCTC | 2 cut(s) | 874, 1341 |
| Eco32I | GATATC | 1 cut(s) | 1563 |
| Eco47I | GGWCC | 1 cut(s) | 1065 |
| Eco57I | CTGAAG | 1 cut(s) | 604 |
| Eco88I | CYCGRG | 2 cut(s) | 1012, 1370 |
| EcoRII | CCWGG | 1 cut(s) | 825 |
| EcoRV | GATATC | 1 cut(s) | 1563 |
| EcoT14I | CCWWGG | 1 cut(s) | 1349 |
| ErhI | CCWWGG | 1 cut(s) | 1349 |
| Esp3I | CGTCTC | 4 cut(s) | 133, 316, 778, 855 |
| FaeI | CATG | 4 cut(s) | 98, 173, 685, 1303 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 361, 393 |
| FatI | CATG | 4 cut(s) | 94, 169, 681, 1299 |
| FauI | CCCGC | 1 cut(s) | 1010 |
| FblI | GTMKAC | 1 cut(s) | 108 |
| Fnu4HI | GCNGC | 6 cut(s) | 318, 402, 1284, 1427, 1430, 1433 |
| FokI | GGATG | 4 cut(s) | 318, 731, 916, 1454 |
| Fsp4HI | GCNGC | 6 cut(s) | 318, 402, 1284, 1427, 1430, 1433 |
| GlaI | GCGC | 1 cut(s) | 216 |
| GluI | GCNGC | 6 cut(s) | 318, 402, 1284, 1427, 1430, 1433 |
| HaeIII | GGCC | 3 cut(s) | 305, 1048, 1360 |
| HapII | CCGG | 8 cut(s) | 179, 192, 212, 302, 956, 1020, 1115, 1333 |
| HgaI | GACGC | 3 cut(s) | 184, 215, 296 |
| HhaI | GCGC | 1 cut(s) | 217 |
| Hin1I | GRCGYC | 1 cut(s) | 195 |
| Hin1II | CATG | 4 cut(s) | 98, 173, 685, 1303 |
| Hin6I | GCGC | 1 cut(s) | 215 |
| HinP1I | GCGC | 1 cut(s) | 215 |
| HincII | GTYRAC | 1 cut(s) | 109 |
| HindII | GTYRAC | 1 cut(s) | 109 |
| HindIII | AAGCTT | 1 cut(s) | 813 |
| HinfI | GANTC | 8 cut(s) | 166, 173, 555, 644, 1313, 1329, 1459, 1538 |
| HpaII | CCGG | 8 cut(s) | 179, 192, 212, 302, 956, 1020, 1115, 1333 |
| HphI | GGTGA | 4 cut(s) | 193, 815, 1047, 1557 |
| Hpy166II | GTNNAC | 4 cut(s) | 109, 961, 1055, 1346 |
| Hpy188I | TCNGA | 8 cut(s) | 59, 200, 325, 428, 670, 834, 1341, 1449 |
| Hpy188III | TCNNGA | 7 cut(s) | 170, 596, 659, 687, 1014, 1125, 1471 |
| Hpy8I | GTNNAC | 4 cut(s) | 109, 961, 1055, 1346 |
| Hpy99I | CGWCG | 4 cut(s) | 113, 200, 241, 290 |
| HpyAV | CCTTC | 5 cut(s) | 343, 348, 628, 686, 1371 |
| HpyCH4III | ACNGT | 5 cut(s) | 256, 310, 918, 970, 993 |
| HpyCH4IV | ACGT | 4 cut(s) | 142, 373, 787, 1381 |
| HpyCH4V | TGCA | 6 cut(s) | 541, 760, 1025, 1286, 1346, 1499 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 446, 455, 1280, 1432 |
| HpyF3I | CTNAG | 3 cut(s) | 1320, 1338, 1536 |
| HpySE526I | ACGT | 4 cut(s) | 142, 373, 787, 1381 |
| Hsp92I | GRCGYC | 1 cut(s) | 195 |
| Hsp92II | CATG | 4 cut(s) | 98, 173, 685, 1303 |
| HspAI | GCGC | 1 cut(s) | 215 |
| KroI | GCCGGC | 1 cut(s) | 301 |
| KroNI | GCCGGC | 1 cut(s) | 303 |
| KspI | CCGCGG | 2 cut(s) | 1006, 1157 |
| LguI | GCTCTTC | 2 cut(s) | 5, 439 |
| LmnI | GCTCC | 1 cut(s) | 214 |
| Lsp1109I | GCAGC | 4 cut(s) | 413, 1270, 1413, 1444 |
| LweI | GCATC | 2 cut(s) | 299, 329 |
| MabI | ACCWGGT | 1 cut(s) | 825 |
| MaeII | ACGT | 4 cut(s) | 142, 373, 787, 1381 |
| MaeIII | GTNAC | 6 cut(s) | 268, 354, 477, 497, 794, 1007 |
| MbiI | CCGCTC | 1 cut(s) | 15 |
| MfeI | CAATTG | 1 cut(s) | 1490 |
| MflI | RGATCY | 3 cut(s) | 677, 1158, 1214 |
| MhlI | GDGCHC | 2 cut(s) | 642, 1348 |
| MluCI | AATT | 4 cut(s) | 1090, 1137, 1490, 1516 |
| MlyI | GAGTC | 4 cut(s) | 167, 564, 1468, 1547 |
| MmeI | TCCRAC | 1 cut(s) | 178 |
| MnlI | CCTC | 9 cut(s) | 199, 273, 274, 345, 422, 488, 501, 733, 836 |
| MroNI | GCCGGC | 1 cut(s) | 301 |
| MseI | TTAA | 5 cut(s) | 452, 530, 998, 1454, 1598 |
| MslI | CAYNNNNRTG | 2 cut(s) | 41, 99 |
| MspA1I | CMGCKG | 4 cut(s) | 404, 1005, 1156, 1426 |
| MspI | CCGG | 8 cut(s) | 179, 192, 212, 302, 956, 1020, 1115, 1333 |
| MspR9I | CCNGG | 1 cut(s) | 827 |
| MunI | CAATTG | 1 cut(s) | 1490 |
| MvaI | CCWGG | 1 cut(s) | 827 |
| MvnI | CGCG | 2 cut(s) | 1005, 1156 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 446, 455, 1280, 1432 |
| NaeI | GCCGGC | 1 cut(s) | 303 |
| NgoMIV | GCCGGC | 1 cut(s) | 301 |
| NlaIII | CATG | 4 cut(s) | 98, 173, 685, 1303 |
| NlaIV | GGNNCC | 1 cut(s) | 1160 |
| NmuCI | GTSAC | 1 cut(s) | 497 |
| OliI | CACNNNNGTG | 1 cut(s) | 41 |
| PaeR7I | CTCGAG | 1 cut(s) | 1012 |
| PagI | TCATGA | 1 cut(s) | 169 |
| PaqCI | CACCTGC | 1 cut(s) | 1576 |
| PceI | AGGCCT | 1 cut(s) | 1048 |
| PciSI | GCTCTTC | 2 cut(s) | 5, 439 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 55 |
| PdiI | GCCGGC | 1 cut(s) | 303 |
| PfeI | GAWTC | 4 cut(s) | 166, 644, 1313, 1329 |
| PinAI | ACCGGT | 2 cut(s) | 955, 1019 |
| PkrI | GCNGC | 6 cut(s) | 319, 403, 1285, 1428, 1431, 1434 |
| PleI | GAGTC | 4 cut(s) | 167, 563, 1467, 1546 |
| PpsI | GAGTC | 4 cut(s) | 167, 563, 1467, 1546 |
| Psp6I | CCWGG | 1 cut(s) | 825 |
| PspGI | CCWGG | 1 cut(s) | 825 |
| PspN4I | GGNNCC | 1 cut(s) | 1160 |
| PspPI | GGNCC | 1 cut(s) | 1065 |
| PsuI | RGATCY | 3 cut(s) | 677, 1158, 1214 |
| PvuII | CAGCTG | 1 cut(s) | 404 |
| RsaI | GTAC | 6 cut(s) | 284, 376, 951, 1184, 1258, 1534 |
| RsaNI | GTAC | 6 cut(s) | 283, 375, 950, 1183, 1257, 1533 |
| RseI | CAYNNNNRTG | 2 cut(s) | 41, 99 |
| SacII | CCGCGG | 2 cut(s) | 1006, 1157 |
| SalI | GTCGAC | 1 cut(s) | 107 |
| SapI | GCTCTTC | 2 cut(s) | 5, 439 |
| SaqAI | TTAA | 5 cut(s) | 452, 530, 998, 1454, 1598 |
| SatI | GCNGC | 6 cut(s) | 318, 402, 1284, 1427, 1430, 1433 |
| Sau96I | GGNCC | 1 cut(s) | 1065 |
| SchI | GAGTC | 4 cut(s) | 167, 564, 1468, 1547 |
| ScrFI | CCNGG | 1 cut(s) | 827 |
| SduI | GDGCHC | 2 cut(s) | 642, 1348 |
| SexAI | ACCWGGT | 1 cut(s) | 825 |
| SfaNI | GCATC | 2 cut(s) | 299, 329 |
| SfcI | CTRYAG | 2 cut(s) | 855, 1222 |
| Sfr274I | CTCGAG | 1 cut(s) | 1012 |
| Sfr303I | CCGCGG | 2 cut(s) | 1006, 1157 |
| SgrBI | CCGCGG | 2 cut(s) | 1006, 1157 |
| SinI | GGWCC | 1 cut(s) | 1065 |
| SlaI | CTCGAG | 1 cut(s) | 1012 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 41, 99 |
| SmlI | CTYRAG | 2 cut(s) | 1012, 1210 |
| SmoI | CTYRAG | 2 cut(s) | 1012, 1210 |
| SpeI | ACTAGT | 1 cut(s) | 487 |
| Sse9I | AATT | 4 cut(s) | 1090, 1137, 1490, 1516 |
| SseBI | AGGCCT | 1 cut(s) | 1048 |
| StuI | AGGCCT | 1 cut(s) | 1048 |
| StyD4I | CCNGG | 1 cut(s) | 825 |
| StyI | CCWWGG | 1 cut(s) | 1349 |
| TaaI | ACNGT | 5 cut(s) | 256, 310, 918, 970, 993 |
| TaiI | ACGT | 4 cut(s) | 145, 376, 790, 1384 |
| TaqI | TCGA | 8 cut(s) | 108, 341, 553, 642, 724, 978, 1013, 1141 |
| TaqII | GACCGA | 3 cut(s) | 898, 1144, 1164 |
| TasI | AATT | 4 cut(s) | 1090, 1137, 1490, 1516 |
| TatI | WGTACW | 1 cut(s) | 1532 |
| TauI | GCSGC | 2 cut(s) | 320, 1432 |
| TfiI | GAWTC | 4 cut(s) | 166, 644, 1313, 1329 |
| Tru1I | TTAA | 5 cut(s) | 452, 530, 998, 1454, 1598 |
| Tru9I | TTAA | 5 cut(s) | 452, 530, 998, 1454, 1598 |
| TscAI | CASTG | 1 cut(s) | 43 |
| TseFI | GTSAC | 1 cut(s) | 497 |
| TseI | GCWGC | 4 cut(s) | 401, 1283, 1426, 1432 |
| Tsp45I | GTSAC | 1 cut(s) | 497 |
| TspDTI | ATGAA | 3 cut(s) | 117, 132, 885 |
| TspGWI | ACGGA | 3 cut(s) | 595, 953, 1325 |
| TspRI | CASTG | 1 cut(s) | 43 |
| VneI | GTGCAC | 1 cut(s) | 1344 |
| VpaK11BI | GGWCC | 1 cut(s) | 1065 |
| XapI | RAATTY | 1 cut(s) | 1137 |
| XbaI | TCTAGA | 1 cut(s) | 1124 |
| XhoI | CTCGAG | 1 cut(s) | 1012 |
| XmiI | GTMKAC | 1 cut(s) | 108 |