iq-domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF4005 | PF13178 | 375 - 480 | 7.8e-22 | Protein of unknown function (DUF4005) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 800 |
| Acc36I | ACCTGC | 1 cut(s) | 800 |
| AccII | CGCG | 2 cut(s) | 718, 747 |
| AccIII | TCCGGA | 1 cut(s) | 156 |
| AclI | AACGTT | 1 cut(s) | 477 |
| AclWI | GGATC | 1 cut(s) | 1068 |
| AcoI | YGGCCR | 2 cut(s) | 267, 861 |
| AcsI | RAATTY | 5 cut(s) | 627, 669, 940, 978, 1574 |
| AcuI | CTGAAG | 3 cut(s) | 1011, 1074, 1405 |
| AfaI | GTAC | 4 cut(s) | 531, 1364, 1458, 1499 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 319, 717, 809, 1141, 1372 |
| AflII | CTTAAG | 1 cut(s) | 434 |
| AflIII | ACRYGT | 1 cut(s) | 960 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 649 |
| AjiI | CACGTC | 1 cut(s) | 963 |
| AjnI | CCWGG | 3 cut(s) | 441, 790, 944 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 218, 250 |
| Alw21I | GWGCWC | 3 cut(s) | 424, 433, 1297 |
| Alw26I | GTCTC | 2 cut(s) | 60, 969 |
| Alw44I | GTGCAC | 2 cut(s) | 429, 1293 |
| AlwI | GGATC | 1 cut(s) | 1068 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 203, 278 |
| Ama87I | CYCGRG | 1 cut(s) | 1319 |
| Aor13HI | TCCGGA | 1 cut(s) | 156 |
| AoxI | GGCC | 6 cut(s) | 267, 439, 604, 788, 861, 947 |
| ApaLI | GTGCAC | 2 cut(s) | 429, 1293 |
| ApoI | RAATTY | 5 cut(s) | 627, 669, 940, 978, 1574 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 330, 872 |
| AspLEI | GCGC | 1 cut(s) | 747 |
| AspS9I | GGNCC | 1 cut(s) | 439 |
| AsuC2I | CCSGG | 1 cut(s) | 1373 |
| AsuHPI | GGTGA | 3 cut(s) | 692, 824, 1026 |
| AsuII | TTCGAA | 2 cut(s) | 876, 976 |
| AvaI | CYCGRG | 1 cut(s) | 1319 |
| BaeGI | GKGCMC | 2 cut(s) | 433, 1297 |
| BalI | TGGCCA | 1 cut(s) | 863 |
| BanII | GRGCYC | 1 cut(s) | 424 |
| Bbv12I | GWGCWC | 3 cut(s) | 424, 433, 1297 |
| BccI | CCATC | 5 cut(s) | 692, 837, 849, 853, 1501 |
| BceAI | ACGGC | 1 cut(s) | 1212 |
| BciT130I | CCWGG | 3 cut(s) | 443, 792, 946 |
| BclI | TGATCA | 1 cut(s) | 73 |
| BcnI | CCSGG | 1 cut(s) | 1373 |
| BcoDI | GTCTC | 2 cut(s) | 60, 969 |
| BfaI | CTAG | 6 cut(s) | 342, 360, 660, 848, 1299, 1443 |
| BfmI | CTRYAG | 5 cut(s) | 33, 204, 279, 285, 807 |
| BfrI | CTTAAG | 1 cut(s) | 434 |
| BfuAI | ACCTGC | 1 cut(s) | 800 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 317, 1188 |
| BlpI | GCTNAGC | 2 cut(s) | 243, 1377 |
| Bme1390I | CCNGG | 4 cut(s) | 443, 792, 946, 1373 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 649 |
| BmeT110I | CYCGRG | 1 cut(s) | 1319 |
| BmgBI | CACGTC | 1 cut(s) | 963 |
| BmgT120I | GGNCC | 1 cut(s) | 439 |
| BmiI | GGNNCC | 1 cut(s) | 800 |
| BmrFI | CCNGG | 4 cut(s) | 443, 792, 946, 1373 |
| BmsI | GCATC | 3 cut(s) | 562, 808, 1121 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 243, 1377 |
| Bpu14I | TTCGAA | 2 cut(s) | 876, 976 |
| BpuEI | CTTGAG | 1 cut(s) | 1453 |
| BpuMI | CCSGG | 1 cut(s) | 1373 |
| BsaAI | YACGTR | 1 cut(s) | 428 |
| BsaBI | GATNNNNATC | 1 cut(s) | 72 |
| BsaI | GGTCTC | 1 cut(s) | 60 |
| BsaJI | CCNNGG | 3 cut(s) | 716, 791, 1275 |
| BsaWI | WCCGGW | 1 cut(s) | 156 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1069, 1099 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 319, 717, 809, 1141, 1372 |
| Bse3DI | GCAATG | 2 cut(s) | 1020, 1227 |
| Bse8I | GATNNNNATC | 1 cut(s) | 72 |
| BseAI | TCCGGA | 1 cut(s) | 156 |
| BseBI | CCWGG | 3 cut(s) | 443, 792, 946 |
| BseDI | CCNNGG | 3 cut(s) | 716, 791, 1275 |
| BseGI | GGATG | 1 cut(s) | 864 |
| BseJI | GATNNNNATC | 1 cut(s) | 72 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 319, 717, 809, 1141, 1372 |
| BseMI | GCAATG | 2 cut(s) | 1020, 1227 |
| BseMII | CTCAG | 3 cut(s) | 234, 1368, 1538 |
| BseSI | GKGCMC | 2 cut(s) | 433, 1297 |
| BsgI | GTGCAG | 1 cut(s) | 1152 |
| Bsh1236I | CGCG | 2 cut(s) | 718, 747 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1118 |
| BshFI | GGCC | 6 cut(s) | 269, 441, 606, 790, 863, 949 |
| BsiEI | CGRYCG | 1 cut(s) | 1118 |
| BsiHKAI | GWGCWC | 3 cut(s) | 424, 433, 1297 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1319 |
| BsiSI | CCGG | 2 cut(s) | 157, 1373 |
| BslFI | GGGAC | 4 cut(s) | 31, 707, 923, 1355 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 319, 717, 809, 1141, 1372 |
| BsmAI | GTCTC | 2 cut(s) | 60, 969 |
| BsmBI | CGTCTC | 1 cut(s) | 969 |
| BsmFI | GGGAC | 4 cut(s) | 31, 707, 923, 1355 |
| BsmI | GAATGC | 2 cut(s) | 47, 395 |
| BsnI | GGCC | 6 cut(s) | 269, 441, 606, 790, 863, 949 |
| Bso31I | GGTCTC | 1 cut(s) | 60 |
| BsoBI | CYCGRG | 1 cut(s) | 1319 |
| Bsp119I | TTCGAA | 2 cut(s) | 876, 976 |
| Bsp1286I | GDGCHC | 3 cut(s) | 424, 433, 1297 |
| Bsp13I | TCCGGA | 1 cut(s) | 156 |
| Bsp1407I | TGTACA | 1 cut(s) | 1456 |
| Bsp143I | GATC | 5 cut(s) | 73, 535, 554, 1060, 1543 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 243, 1377 |
| BspANI | GGCC | 6 cut(s) | 269, 441, 606, 790, 863, 949 |
| BspCNI | CTCAG | 3 cut(s) | 235, 1369, 1539 |
| BspEI | TCCGGA | 1 cut(s) | 156 |
| BspFNI | CGCG | 2 cut(s) | 718, 747 |
| BspLI | GGNNCC | 1 cut(s) | 800 |
| BspMAI | CTGCAG | 3 cut(s) | 283, 289, 811 |
| BspMI | ACCTGC | 1 cut(s) | 800 |
| BspPI | GGATC | 1 cut(s) | 1068 |
| BspT104I | TTCGAA | 2 cut(s) | 876, 976 |
| BspTI | CTTAAG | 1 cut(s) | 434 |
| BspTNI | GGTCTC | 1 cut(s) | 60 |
| BsrDI | GCAATG | 2 cut(s) | 1020, 1227 |
| BsrGI | TGTACA | 1 cut(s) | 1456 |
| BssECI | CCNNGG | 3 cut(s) | 716, 791, 1275 |
| BssMI | GATC | 5 cut(s) | 73, 535, 554, 1060, 1543 |
| BssT1I | CCWWGG | 1 cut(s) | 1275 |
| Bst2UI | CCWGG | 3 cut(s) | 443, 792, 946 |
| Bst4CI | ACNGT | 4 cut(s) | 169, 199, 205, 925 |
| Bst6I | CTCTTC | 4 cut(s) | 91, 125, 134, 825 |
| BstAFI | CTTAAG | 1 cut(s) | 434 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 278 |
| BstAUI | TGTACA | 1 cut(s) | 1456 |
| BstBAI | YACGTR | 1 cut(s) | 428 |
| BstBI | TTCGAA | 2 cut(s) | 876, 976 |
| BstC8I | GCNNGC | 5 cut(s) | 255, 489, 512, 516, 1074 |
| BstDEI | CTNAG | 6 cut(s) | 243, 460, 674, 1289, 1377, 1547 |
| BstDSI | CCRYGG | 1 cut(s) | 716 |
| BstF5I | GGATG | 1 cut(s) | 864 |
| BstFNI | CGCG | 2 cut(s) | 718, 747 |
| BstHHI | GCGC | 1 cut(s) | 747 |
| BstKTI | GATC | 5 cut(s) | 76, 538, 557, 1063, 1546 |
| BstMAI | GTCTC | 2 cut(s) | 60, 969 |
| BstMBI | GATC | 5 cut(s) | 73, 535, 554, 1060, 1543 |
| BstMCI | CGRYCG | 1 cut(s) | 1118 |
| BstNI | CCWGG | 3 cut(s) | 443, 792, 946 |
| BstNSI | RCATGY | 1 cut(s) | 514 |
| BstSCI | CCNGG | 4 cut(s) | 441, 790, 944, 1371 |
| BstSFI | CTRYAG | 5 cut(s) | 33, 204, 279, 285, 807 |
| BstSLI | GKGCMC | 2 cut(s) | 433, 1297 |
| BstUI | CGCG | 2 cut(s) | 718, 747 |
| BsuRI | GGCC | 6 cut(s) | 269, 441, 606, 790, 863, 949 |
| BtgI | CCRYGG | 1 cut(s) | 716 |
| BtrI | CACGTC | 1 cut(s) | 963 |
| BtsCI | GGATG | 1 cut(s) | 864 |
| BtsIMutI | CAGTG | 3 cut(s) | 204, 1257, 1539 |
| BveI | ACCTGC | 1 cut(s) | 800 |
| Cac8I | GCNNGC | 5 cut(s) | 255, 489, 512, 516, 1074 |
| CaiI | CAGNNNCTG | 2 cut(s) | 203, 278 |
| CfoI | GCGC | 1 cut(s) | 747 |
| Cfr13I | GGNCC | 1 cut(s) | 439 |
| Cfr42I | CCGCGG | 1 cut(s) | 719 |
| CseI | GACGC | 1 cut(s) | 248 |
| Csp6I | GTAC | 4 cut(s) | 530, 1363, 1457, 1498 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 246, 281 |
| CviAII | CATG | 9 cut(s) | 24, 107, 173, 511, 569, 589, 1057, 1249, 1530 |
| CviQI | GTAC | 4 cut(s) | 530, 1363, 1457, 1498 |
| DdeI | CTNAG | 6 cut(s) | 243, 460, 674, 1289, 1377, 1547 |
| DpnI | GATC | 5 cut(s) | 75, 537, 556, 1062, 1545 |
| DpnII | GATC | 5 cut(s) | 73, 535, 554, 1060, 1543 |
| DraI | TTTAAA | 1 cut(s) | 741 |
| DriI | GACNNNNNGTC | 1 cut(s) | 649 |
| EaeI | YGGCCR | 2 cut(s) | 267, 861 |
| Eam1104I | CTCTTC | 4 cut(s) | 91, 125, 134, 825 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 649 |
| EarI | CTCTTC | 4 cut(s) | 91, 125, 134, 825 |
| EciI | GGCGGA | 1 cut(s) | 335 |
| Ecl136II | GAGCTC | 1 cut(s) | 422 |
| Eco130I | CCWWGG | 1 cut(s) | 1275 |
| Eco147I | AGGCCT | 3 cut(s) | 606, 790, 949 |
| Eco24I | GRGCYC | 1 cut(s) | 424 |
| Eco31I | GGTCTC | 1 cut(s) | 60 |
| Eco53kI | GAGCTC | 1 cut(s) | 422 |
| Eco57I | CTGAAG | 3 cut(s) | 1011, 1074, 1405 |
| Eco88I | CYCGRG | 1 cut(s) | 1319 |
| EcoICRI | GAGCTC | 1 cut(s) | 422 |
| EcoO109I | RGGNCCY | 1 cut(s) | 439 |
| EcoRI | GAATTC | 1 cut(s) | 627 |
| EcoRII | CCWGG | 3 cut(s) | 441, 790, 944 |
| EcoT14I | CCWWGG | 1 cut(s) | 1275 |
| EcoT22I | ATGCAT | 1 cut(s) | 512 |
| EcoT38I | GRGCYC | 1 cut(s) | 424 |
| ErhI | CCWWGG | 1 cut(s) | 1275 |
| Esp3I | CGTCTC | 1 cut(s) | 969 |
| FaeI | CATG | 9 cut(s) | 27, 110, 176, 514, 572, 592, 1060, 1252, 1533 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 36 |
| FaqI | GGGAC | 4 cut(s) | 31, 707, 923, 1355 |
| FatI | CATG | 9 cut(s) | 23, 106, 172, 510, 568, 588, 1056, 1248, 1529 |
| FauI | CCCGC | 1 cut(s) | 1081 |
| FbaI | TGATCA | 1 cut(s) | 73 |
| FokI | GGATG | 1 cut(s) | 871 |
| FriOI | GRGCYC | 1 cut(s) | 424 |
| FspBI | CTAG | 6 cut(s) | 342, 360, 660, 848, 1299, 1443 |
| GlaI | GCGC | 1 cut(s) | 746 |
| HaeIII | GGCC | 6 cut(s) | 269, 441, 606, 790, 863, 949 |
| HapII | CCGG | 2 cut(s) | 157, 1373 |
| HgaI | GACGC | 1 cut(s) | 248 |
| HhaI | GCGC | 1 cut(s) | 747 |
| Hin1II | CATG | 9 cut(s) | 27, 110, 176, 514, 572, 592, 1060, 1252, 1533 |
| Hin6I | GCGC | 1 cut(s) | 745 |
| HinP1I | GCGC | 1 cut(s) | 745 |
| HindIII | AAGCTT | 1 cut(s) | 449 |
| HinfI | GANTC | 7 cut(s) | 226, 620, 721, 911, 1123, 1262, 1569 |
| HpaII | CCGG | 2 cut(s) | 157, 1373 |
| HphI | GGTGA | 3 cut(s) | 692, 824, 1026 |
| Hpy166II | GTNNAC | 5 cut(s) | 431, 544, 1295, 1457, 1500 |
| Hpy188I | TCNGA | 6 cut(s) | 401, 483, 780, 1093, 1107, 1548 |
| Hpy188III | TCNNGA | 7 cut(s) | 157, 624, 632, 641, 660, 1233, 1450 |
| Hpy8I | GTNNAC | 5 cut(s) | 431, 544, 1295, 1457, 1500 |
| HpyAV | CCTTC | 5 cut(s) | 138, 617, 960, 1098, 1320 |
| HpyCH4III | ACNGT | 4 cut(s) | 169, 199, 205, 925 |
| HpyCH4IV | ACGT | 3 cut(s) | 427, 477, 962 |
| HpyF3I | CTNAG | 6 cut(s) | 243, 460, 674, 1289, 1377, 1547 |
| HpySE526I | ACGT | 3 cut(s) | 427, 477, 962 |
| Hsp92II | CATG | 9 cut(s) | 27, 110, 176, 514, 572, 592, 1060, 1252, 1533 |
| HspAI | GCGC | 1 cut(s) | 745 |
| Kpn2I | TCCGGA | 1 cut(s) | 156 |
| Ksp22I | TGATCA | 1 cut(s) | 73 |
| KspI | CCGCGG | 1 cut(s) | 719 |
| Kzo9I | GATC | 5 cut(s) | 73, 535, 554, 1060, 1543 |
| LweI | GCATC | 3 cut(s) | 562, 808, 1121 |
| MaeI | CTAG | 6 cut(s) | 342, 360, 660, 848, 1299, 1443 |
| MaeII | ACGT | 3 cut(s) | 427, 477, 962 |
| MaeIII | GTNAC | 3 cut(s) | 199, 404, 641 |
| MalI | GATC | 5 cut(s) | 75, 537, 556, 1062, 1545 |
| MboI | GATC | 5 cut(s) | 73, 535, 554, 1060, 1543 |
| MboII | GAAGA | 8 cut(s) | 108, 128, 131, 134, 142, 151, 335, 842 |
| MfeI | CAATTG | 2 cut(s) | 258, 897 |
| MhlI | GDGCHC | 3 cut(s) | 424, 433, 1297 |
| MlsI | TGGCCA | 1 cut(s) | 863 |
| MluNI | TGGCCA | 1 cut(s) | 863 |
| MlyI | GAGTC | 4 cut(s) | 730, 905, 1132, 1563 |
| Mox20I | TGGCCA | 1 cut(s) | 863 |
| Mph1103I | ATGCAT | 1 cut(s) | 512 |
| MroI | TCCGGA | 1 cut(s) | 156 |
| MroXI | GAANNNNTTC | 2 cut(s) | 330, 872 |
| MscI | TGGCCA | 1 cut(s) | 863 |
| MseI | TTAA | 2 cut(s) | 435, 740 |
| MslI | CAYNNNNRTG | 2 cut(s) | 505, 1395 |
| Msp20I | TGGCCA | 1 cut(s) | 863 |
| MspA1I | CMGCKG | 4 cut(s) | 284, 299, 718, 1166 |
| MspCI | CTTAAG | 1 cut(s) | 434 |
| MspI | CCGG | 2 cut(s) | 157, 1373 |
| MspR9I | CCNGG | 4 cut(s) | 443, 792, 946, 1373 |
| MunI | CAATTG | 2 cut(s) | 258, 897 |
| Mva1269I | GAATGC | 2 cut(s) | 47, 395 |
| MvaI | CCWGG | 3 cut(s) | 443, 792, 946 |
| MvnI | CGCG | 2 cut(s) | 718, 747 |
| NciI | CCSGG | 1 cut(s) | 1373 |
| NdeII | GATC | 5 cut(s) | 73, 535, 554, 1060, 1543 |
| NlaIII | CATG | 9 cut(s) | 27, 110, 176, 514, 572, 592, 1060, 1252, 1533 |
| NlaIV | GGNNCC | 1 cut(s) | 800 |
| NmeAIII | GCCGAG | 1 cut(s) | 914 |
| NmuCI | GTSAC | 2 cut(s) | 199, 641 |
| NsiI | ATGCAT | 1 cut(s) | 512 |
| NspI | RCATGY | 1 cut(s) | 514 |
| NspV | TTCGAA | 2 cut(s) | 876, 976 |
| PaeI | GCATGC | 1 cut(s) | 514 |
| PaqCI | CACCTGC | 1 cut(s) | 800 |
| PceI | AGGCCT | 3 cut(s) | 606, 790, 949 |
| PctI | GAATGC | 2 cut(s) | 47, 395 |
| PdmI | GAANNNNTTC | 2 cut(s) | 330, 872 |
| PfeI | GAWTC | 3 cut(s) | 226, 620, 1262 |
| PleI | GAGTC | 4 cut(s) | 729, 905, 1131, 1563 |
| PpsI | GAGTC | 4 cut(s) | 729, 905, 1131, 1563 |
| Ppu21I | YACGTR | 1 cut(s) | 428 |
| Psp124BI | GAGCTC | 1 cut(s) | 424 |
| Psp1406I | AACGTT | 1 cut(s) | 477 |
| Psp6I | CCWGG | 3 cut(s) | 441, 790, 944 |
| PspGI | CCWGG | 3 cut(s) | 441, 790, 944 |
| PspN4I | GGNNCC | 1 cut(s) | 800 |
| PspPI | GGNCC | 1 cut(s) | 439 |
| PstI | CTGCAG | 3 cut(s) | 283, 289, 811 |
| PstNI | CAGNNNCTG | 2 cut(s) | 203, 278 |
| PvuII | CAGCTG | 3 cut(s) | 284, 299, 1166 |
| RsaI | GTAC | 4 cut(s) | 531, 1364, 1458, 1499 |
| RsaNI | GTAC | 4 cut(s) | 530, 1363, 1457, 1498 |
| RseI | CAYNNNNRTG | 2 cut(s) | 505, 1395 |
| SacI | GAGCTC | 1 cut(s) | 424 |
| SacII | CCGCGG | 1 cut(s) | 719 |
| SaqAI | TTAA | 2 cut(s) | 435, 740 |
| Sau3AI | GATC | 5 cut(s) | 73, 535, 554, 1060, 1543 |
| Sau96I | GGNCC | 1 cut(s) | 439 |
| SchI | GAGTC | 4 cut(s) | 730, 905, 1132, 1563 |
| ScrFI | CCNGG | 4 cut(s) | 443, 792, 946, 1373 |
| SduI | GDGCHC | 3 cut(s) | 424, 433, 1297 |
| SfaNI | GCATC | 3 cut(s) | 562, 808, 1121 |
| SfcI | CTRYAG | 5 cut(s) | 33, 204, 279, 285, 807 |
| Sfr303I | CCGCGG | 1 cut(s) | 719 |
| SfuI | TTCGAA | 2 cut(s) | 876, 976 |
| SgrBI | CCGCGG | 1 cut(s) | 719 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 505, 1395 |
| SmlI | CTYRAG | 2 cut(s) | 434, 1432 |
| SmoI | CTYRAG | 2 cut(s) | 434, 1432 |
| SphI | GCATGC | 1 cut(s) | 514 |
| SseBI | AGGCCT | 3 cut(s) | 606, 790, 949 |
| SspMI | CTAG | 6 cut(s) | 342, 360, 660, 848, 1299, 1443 |
| SstI | GAGCTC | 1 cut(s) | 424 |
| StuI | AGGCCT | 3 cut(s) | 606, 790, 949 |
| StyD4I | CCNGG | 4 cut(s) | 441, 790, 944, 1371 |
| StyI | CCWWGG | 1 cut(s) | 1275 |
| TaaI | ACNGT | 4 cut(s) | 169, 199, 205, 925 |
| TaiI | ACGT | 3 cut(s) | 430, 480, 965 |
| TaqI | TCGA | 6 cut(s) | 580, 724, 876, 933, 976, 1313 |
| TaqII | GACCGA | 1 cut(s) | 361 |
| TatI | WGTACW | 1 cut(s) | 1456 |
| TauI | GCSGC | 4 cut(s) | 272, 320, 737, 1338 |
| TfiI | GAWTC | 3 cut(s) | 226, 620, 1262 |
| Tru1I | TTAA | 2 cut(s) | 435, 740 |
| Tru9I | TTAA | 2 cut(s) | 435, 740 |
| TscAI | CASTG | 3 cut(s) | 204, 1264, 1546 |
| TseFI | GTSAC | 2 cut(s) | 199, 641 |
| Tsp45I | GTSAC | 2 cut(s) | 199, 641 |
| TspDTI | ATGAA | 3 cut(s) | 12, 123, 161 |
| TspRI | CASTG | 3 cut(s) | 204, 1264, 1546 |
| Vha464I | CTTAAG | 1 cut(s) | 434 |
| VneI | GTGCAC | 2 cut(s) | 429, 1293 |
| XapI | RAATTY | 5 cut(s) | 627, 669, 940, 978, 1574 |
| XbaI | TCTAGA | 1 cut(s) | 659 |
| XceI | RCATGY | 1 cut(s) | 514 |
| XmnI | GAANNNNTTC | 2 cut(s) | 330, 872 |
| XspI | CTAG | 6 cut(s) | 342, 360, 660, 848, 1299, 1443 |
| Zsp2I | ATGCAT | 1 cut(s) | 512 |