Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0001398

Physical Location & Seq

Genomic Coordinates Reverse (-)

35761074 .. 35763835

Gene Structure 2762 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1297900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGGGGAAGACCGGAGGGAGCTCCTGGTTGACTGCGGTCAAAAGGGCTTTCTGGTCTCCTACCAAGAGTGACAGAACCAACACTAGGAGGAGAGAAGAACTGCAGGAACAAGAGGAAGAAGAAAAGAAGAGAGGAAAGCGGAGATGGATTTTTAGGAAGCCTACGAGCCAAGAAACGTTTATACATGTACAACATAGTGAGAGTCCAAGCTCTGCTGCTGATGGCGGAGCAACCACTCGAAATGCAACTATGGCAGCTCATGGTGAGGCTGGTGATGCTCTTGCAACGGCCGTGGCCACGAAAGCGGCGGCTCAGGCAGCAGTTGTCATGGTGCAAGCGGCTGTCAAAGCTGTTCGTCTTACTAAATCTAATTGCAGGCCTTCCATTTTCGTTAGAGACCATGCTGCCATTGTTATTCAGACTGCCTTCAGAGGATATCTGGCGAGAAGAGCTCTTCGGGCGCTGAAGGGGCTGGTGAAGCTTCAAGCACTGGTGAGAGGCCACAATGTTAGAAAGAGGGCAAAGATGACTCTGCAATGCATGCAGGCTCTGGTTCGAGTGCAAGCTCGTGTTCTTGACCAACGAACGAAGAGGCTTTCGCACGAAGGCAGCGCAGATTCCATTTTCAGTGATCCCACTGGCTTGTGGGGATCACATTTCTCAGACAGAAGGGAGTCCATTTCGAAAAACAAAGAGAGGAGCGCCGCGGATGATTTGATCCATTGGGACGATGTCAAACCGAAAACATTGGAGCAGATTCAAGCCATGTTGCAGAAAACAAAACAAGCTGCCTTGAAGCGTGAAAGGAGTACCAGCCTTGCTTATGCCTTCTCTAACCAGAGATGGAGAAGTAGAGGTAGCGGCGACGAAGATGCCGGTGAGCATGAGGAGCTAGAGGAGAAGTTTGATTTGCTTGATGGTTGGACAAGAAGAAAGCAATGTGAGATCAATGGAGGCAGAGCTTCATGTGATCAGAGAGATCCCATCAAGACCGTTGAAATCGACACTTCTCGACCTCACTCTTATTCGAGTACCCCGAATTCCAATTCCAGAACCAAACGATCAGATCAATGTAAGTATCAGAGCCATCATCTGCGGTATAATTATCAACAGCAAAGAGTTCATCCGCAGTCATATCCAGTTGCCTCTCCTCAATCACCCGTCACGCCATTTTCTTCCGTGGCAAGAAATCTACAAGTGCACTCGGCTAGTCCCCGTTGCCTTCGTGGAGATCATAGGATTAACCACCCAATGCCGGCATCACATAACTTGAACTTAGGCTCAACGAATTACGACCACGGATTAATGGGGGTGCCAAACTACATGGCTGCTACAGCATCAGCCAAGGCTCGGATTCGGTCTCAAAGTGCACCGAGGCAAAGGCATTCAACAAGCGAGAGAGAAAAGTCAGGGTCCGCGAGGAAACGCTTGTCGTTTCCAGCTCCTGACTCATGCGGTGGTGGCAGTGCTACTGCTAATGTTAATGGTGGTTCAGATTATACCTTGGAGAGCCCAAGATATAGCAACGGCATCAACGGAGACCTTGCAGTTCGAATGCCGCGGAGGACAAGCATGTCATCTTGTTACACTGATGGTGAGACATCTCCAACTTCCAGCAGTGAGCTCAGAAGGTACTGGTTTAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4005 IQ

Protein Analysis

549

Amino Acids

61.16

Weight (kDa)

10.17

Isoelectric Point (pI)

65.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IQ	PF00612	134 - 153	9.6e-06	IQ calmodulin-binding motif
DUF4005	PF13178	404 - 492	1.6e-19	Protein of unknown function (DUF4005)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001398)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01110 AT1G01110 AT4G00820
fragaria_vesca	FvH4_5g10710 FvH4_7g17520 FvH4_7g17520 FvH4_7g17520 FvH4_7g32790
malus_domestica	MD01G1087900.v1.1 MD01G1227500.v1.1 MD06G1121100.v1.1 MD07G1158100.v1.1 MD07G1170800.v1.1 MD07G1297900.v1.1 MD14G1137700.v1.1
prunus_persica	Prupe.2G196500_v2.0.a1 Prupe.2G317600_v2.0.a1 Prupe.2G317600_v2.0.a1 Prupe.2G317600_v2.0.a1 Prupe.5G131700_v2.0.a1
pyrus_communis	pycom01g11180 pycom07g15460 pycom07g27030 pycom14g11290
rosa_chinensis	RchiOBHm_Chr1g0360961 RchiOBHm_Chr1g0382751 RchiOBHm_Chr7g0187421
rosa_laevigata	RLG00000004782 RLG00000026164 RLG00000027766
rosa_multiflora	Rmu_co8094202.1_g000001
rosa_roxburghii	Rroxscaffold_3G00267450 Rroxscaffold_4G00277940 Rroxscaffold_4G00295660
rosa_rugosa	Rorug01G0283900 Rorug01G0284000 Rorug01G0435500 Rorug06G0481500
rosa_samantha	Rh1AG295200 Rh1AG460700 Rh1BG260000 Rh1BG417500 Rh1CG277400 Rh1CG431100 Rh1DG290000 Rh1DG449700 Rh7AG086000 Rh7BG087500 Rh7CG086900 Rh7DG088500
rosa_wichuraiana	Rw1G026120 Rw1G041090 Rw7G007590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1573
AccB1I	GGYRCC	1 cut(s)	1312
AccII	CGCG	3 cut(s)	707, 1418, 1561
AclI	AACGTT	1 cut(s)	176
AclWI	GGATC	4 cut(s)	626, 658, 712, 974
AcoI	YGGCCR	2 cut(s)	288, 294
AcsI	RAATTY	1 cut(s)	1039
AcuI	CTGAAG	2 cut(s)	412, 485
AfaI	GTAC	4 cut(s)	189, 811, 1033, 1634
AfiI	CCNNNNNNNGG	3 cut(s)	84, 1255, 1350
AflIII	ACRYGT	1 cut(s)	184
AgsI	TTSAA	6 cut(s)	485, 761, 796, 998, 1273, 1389
AjnI	CCWGG	1 cut(s)	23
Alw21I	GWGCWC	5 cut(s)	23, 454, 1203, 1372, 1626
Alw26I	GTCTC	5 cut(s)	60, 390, 1365, 1533, 1592
Alw44I	GTGCAC	2 cut(s)	1199, 1368
AlwI	GGATC	4 cut(s)	626, 658, 712, 974
AlwNI	CAGNNNCTG	2 cut(s)	550, 1445
AoxI	GGCC	4 cut(s)	288, 294, 377, 499
ApaLI	GTGCAC	2 cut(s)	1199, 1368
ApeKI	GCWGC	7 cut(s)	215, 254, 317, 404, 609, 788, 1328
ApoI	RAATTY	1 cut(s)	1039
AseI	ATTAAT	1 cut(s)	1304
AspLEI	GCGC	3 cut(s)	463, 614, 704
AspS9I	GGNCC	1 cut(s)	1413
AsuHPI	GGTGA	7 cut(s)	275, 284, 487, 505, 890, 1149, 1607
AsuII	TTCGAA	2 cut(s)	683, 1552
AvaII	GGWCC	1 cut(s)	1413
BaeGI	GKGCMC	2 cut(s)	1203, 1372
BalI	TGGCCA	1 cut(s)	296
BanI	GGYRCC	1 cut(s)	1312
BanII	GRGCYC	4 cut(s)	23, 454, 1514, 1626
BauI	CACGAG	1 cut(s)	567
BbsI	GAAGAC	1 cut(s)	14
Bbv12I	GWGCWC	5 cut(s)	23, 454, 1203, 1372, 1626
BbvI	GCAGC	7 cut(s)	202, 266, 329, 391, 621, 775, 1315
BccI	CCATC	7 cut(s)	138, 215, 837, 911, 992, 1095, 1586
BceAI	ACGGC	3 cut(s)	275, 303, 1543
BcgI	CGANNNNNNTGC	2 cut(s)	854, 888
BciT130I	CCWGG	1 cut(s)	25
BclI	TGATCA	1 cut(s)	970
BcoDI	GTCTC	5 cut(s)	60, 390, 1365, 1533, 1592
BfaI	CTAG	3 cut(s)	84, 893, 1209
BfmI	CTRYAG	2 cut(s)	101, 1332
BfoI	RGCGCY	2 cut(s)	464, 705
Bme1390I	CCNGG	1 cut(s)	25
Bme18I	GGWCC	1 cut(s)	1413
BmgT120I	GGNCC	1 cut(s)	1413
BmiI	GGNNCC	2 cut(s)	1314, 1414
BmrFI	CCNGG	1 cut(s)	25
BmsI	GCATC	5 cut(s)	265, 862, 1268, 1346, 1539
BoxI	GACNNNNGTC	1 cut(s)	35
BpiI	GAAGAC	1 cut(s)	14
BplI	GAGNNNNNCTC	2 cut(s)	436, 468
Bpu10I	CCTNAGC	1 cut(s)	312
Bpu14I	TTCGAA	2 cut(s)	683, 1552
BsaI	GGTCTC	4 cut(s)	60, 390, 1365, 1533
BsaJI	CCNNGG	8 cut(s)	291, 705, 1179, 1297, 1344, 1373, 1503, 1559
BsaWI	WCCGGW	1 cut(s)	11
Bsc4I	CCNNNNNNNGG	3 cut(s)	84, 1255, 1350
Bse118I	RCCGGY	2 cut(s)	875, 1255
Bse1I	ACTGG	4 cut(s)	495, 643, 1139, 1640
Bse3DI	GCAATG	2 cut(s)	542, 944
BseBI	CCWGG	1 cut(s)	25
BseDI	CCNNGG	8 cut(s)	291, 705, 1179, 1297, 1344, 1373, 1503, 1559
BseGI	GGATG	2 cut(s)	715, 1123
BseLI	CCNNNNNNNGG	3 cut(s)	84, 1255, 1350
BseMI	GCAATG	2 cut(s)	542, 944
BseMII	CTCAG	3 cut(s)	326, 675, 1639
BseNI	ACTGG	4 cut(s)	495, 643, 1139, 1640
BseRI	GAGGAG	5 cut(s)	103, 712, 902, 911, 1140
BseSI	GKGCMC	2 cut(s)	1203, 1372
BseX3I	CGGCCG	1 cut(s)	288
BseXI	GCAGC	7 cut(s)	202, 266, 329, 391, 621, 775, 1315
Bsh1236I	CGCG	3 cut(s)	707, 1418, 1561
Bsh1285I	CGRYCG	1 cut(s)	291
BshFI	GGCC	4 cut(s)	290, 296, 379, 501
BshNI	GGYRCC	1 cut(s)	1312
BsiEI	CGRYCG	1 cut(s)	291
BsiHKAI	GWGCWC	5 cut(s)	23, 454, 1203, 1372, 1626
BsiSI	CCGG	3 cut(s)	12, 876, 1256
BslFI	GGGAC	2 cut(s)	740, 1197
BslI	CCNNNNNNNGG	3 cut(s)	84, 1255, 1350
BsmAI	GTCTC	5 cut(s)	60, 390, 1365, 1533, 1592
BsmFI	GGGAC	2 cut(s)	740, 1197
BsmI	GAATGC	2 cut(s)	1384, 1560
BsnI	GGCC	4 cut(s)	290, 296, 379, 501
Bso31I	GGTCTC	4 cut(s)	60, 390, 1365, 1533
Bsp119I	TTCGAA	2 cut(s)	683, 1552
Bsp1286I	GDGCHC	6 cut(s)	23, 454, 1203, 1372, 1514, 1626
Bsp1407I	TGTACA	1 cut(s)	187
Bsp143I	GATC	9 cut(s)	631, 650, 717, 945, 970, 979, 1061, 1066, 1231
BspANI	GGCC	4 cut(s)	290, 296, 379, 501
BspCNI	CTCAG	3 cut(s)	325, 674, 1638
BspFNI	CGCG	3 cut(s)	707, 1418, 1561
BspLI	GGNNCC	2 cut(s)	1314, 1414
BspMAI	CTGCAG	1 cut(s)	105
BspPI	GGATC	4 cut(s)	626, 658, 712, 974
BspQI	GCTCTTC	2 cut(s)	442, 459
BspT104I	TTCGAA	2 cut(s)	683, 1552
BspT107I	GGYRCC	1 cut(s)	1312
BspTNI	GGTCTC	4 cut(s)	60, 390, 1365, 1533
BsrDI	GCAATG	2 cut(s)	542, 944
BsrFI	RCCGGY	2 cut(s)	875, 1255
BsrGI	TGTACA	1 cut(s)	187
BsrI	ACTGG	4 cut(s)	495, 643, 1139, 1640
BssAI	RCCGGY	2 cut(s)	875, 1255
BssECI	CCNNGG	8 cut(s)	291, 705, 1179, 1297, 1344, 1373, 1503, 1559
BssMI	GATC	9 cut(s)	631, 650, 717, 945, 970, 979, 1061, 1066, 1231
BssSI	CACGAG	1 cut(s)	567
BssT1I	CCWWGG	2 cut(s)	1344, 1503
Bst2BI	CACGAG	1 cut(s)	567
Bst2UI	CCWGG	1 cut(s)	25
Bst4CI	ACNGT	1 cut(s)	994
Bst6I	CTCTTC	4 cut(s)	122, 442, 459, 584
BstAPI	GCANNNNNTGC	1 cut(s)	541
BstAUI	TGTACA	1 cut(s)	187
BstBI	TTCGAA	2 cut(s)	683, 1552
BstC8I	GCNNGC	6 cut(s)	336, 377, 542, 546, 564, 1257
BstDEI	CTNAG	4 cut(s)	312, 661, 1276, 1625
BstDSI	CCRYGG	5 cut(s)	291, 705, 1179, 1297, 1559
BstF5I	GGATG	2 cut(s)	715, 1123
BstFNI	CGCG	3 cut(s)	707, 1418, 1561
BstH2I	RGCGCY	2 cut(s)	464, 705
BstHHI	GCGC	3 cut(s)	463, 614, 704
BstKTI	GATC	9 cut(s)	634, 653, 720, 948, 973, 982, 1064, 1069, 1234
BstMAI	GTCTC	5 cut(s)	60, 390, 1365, 1533, 1592
BstMBI	GATC	9 cut(s)	631, 650, 717, 945, 970, 979, 1061, 1066, 1231
BstMCI	CGRYCG	1 cut(s)	291
BstNI	CCWGG	1 cut(s)	25
BstNSI	RCATGY	3 cut(s)	188, 544, 1576
BstPAI	GACNNNNGTC	1 cut(s)	35
BstSCI	CCNGG	1 cut(s)	23
BstSFI	CTRYAG	2 cut(s)	101, 1332
BstSLI	GKGCMC	2 cut(s)	1203, 1372
BstUI	CGCG	3 cut(s)	707, 1418, 1561
BstV1I	GCAGC	7 cut(s)	202, 266, 329, 391, 621, 775, 1315
BstV2I	GAAGAC	1 cut(s)	14
BstX2I	RGATCY	1 cut(s)	979
BstYI	RGATCY	1 cut(s)	979
BstZI	CGGCCG	1 cut(s)	288
BsuRI	GGCC	4 cut(s)	290, 296, 379, 501
BtgI	CCRYGG	5 cut(s)	291, 705, 1179, 1297, 1559
BtsCI	GGATG	2 cut(s)	715, 1123
BtsI	GCAGTG	2 cut(s)	1471, 1624
BtsIMutI	CAGTG	6 cut(s)	488, 634, 636, 1471, 1587, 1624
Cac8I	GCNNGC	6 cut(s)	336, 377, 542, 546, 564, 1257
CaiI	CAGNNNCTG	2 cut(s)	550, 1445
CfoI	GCGC	3 cut(s)	463, 614, 704
Cfr10I	RCCGGY	2 cut(s)	875, 1255
Cfr13I	GGNCC	1 cut(s)	1413
Cfr42I	CCGCGG	2 cut(s)	708, 1562
Csp6I	GTAC	4 cut(s)	188, 810, 1032, 1633
CspCI	CAANNNNNGTGG	2 cut(s)	273, 308
CviQI	GTAC	4 cut(s)	188, 810, 1032, 1633
DdeI	CTNAG	4 cut(s)	312, 661, 1276, 1625
DpnI	GATC	9 cut(s)	633, 652, 719, 947, 972, 981, 1063, 1068, 1233
DpnII	GATC	9 cut(s)	631, 650, 717, 945, 970, 979, 1061, 1066, 1231
DrdI	GACNNNNNNGTC	1 cut(s)	1573
DseDI	GACNNNNNNGTC	1 cut(s)	1573
EaeI	YGGCCR	2 cut(s)	288, 294
EagI	CGGCCG	1 cut(s)	288
Eam1104I	CTCTTC	4 cut(s)	122, 442, 459, 584
EarI	CTCTTC	4 cut(s)	122, 442, 459, 584
EciI	GGCGGA	1 cut(s)	240
Ecl136II	GAGCTC	3 cut(s)	21, 452, 1624
EclXI	CGGCCG	1 cut(s)	288
Eco130I	CCWWGG	2 cut(s)	1344, 1503
Eco147I	AGGCCT	1 cut(s)	379
Eco24I	GRGCYC	4 cut(s)	23, 454, 1514, 1626
Eco31I	GGTCTC	4 cut(s)	60, 390, 1365, 1533
Eco32I	GATATC	1 cut(s)	437
Eco47I	GGWCC	1 cut(s)	1413
Eco52I	CGGCCG	1 cut(s)	288
Eco53kI	GAGCTC	3 cut(s)	21, 452, 1624
Eco57I	CTGAAG	2 cut(s)	412, 485
EcoICRI	GAGCTC	3 cut(s)	21, 452, 1624
EcoRI	GAATTC	1 cut(s)	1039
EcoRII	CCWGG	1 cut(s)	23
EcoRV	GATATC	1 cut(s)	437
EcoT14I	CCWWGG	2 cut(s)	1344, 1503
EcoT22I	ATGCAT	1 cut(s)	542
EcoT38I	GRGCYC	4 cut(s)	23, 454, 1514, 1626
ErhI	CCWWGG	2 cut(s)	1344, 1503
FaqI	GGGAC	2 cut(s)	740, 1197
FbaI	TGATCA	1 cut(s)	970
FokI	GGATG	2 cut(s)	722, 1110
FriOI	GRGCYC	4 cut(s)	23, 454, 1514, 1626
FspBI	CTAG	3 cut(s)	84, 893, 1209
GlaI	GCGC	3 cut(s)	462, 613, 703
HaeII	RGCGCY	2 cut(s)	464, 705
HaeIII	GGCC	4 cut(s)	290, 296, 379, 501
HapII	CCGG	3 cut(s)	12, 876, 1256
HhaI	GCGC	3 cut(s)	463, 614, 704
Hin6I	GCGC	3 cut(s)	461, 612, 702
HinP1I	GCGC	3 cut(s)	461, 612, 702
HincII	GTYRAC	1 cut(s)	30
HindII	GTYRAC	1 cut(s)	30
HindIII	AAGCTT	1 cut(s)	479
HinfI	GANTC	7 cut(s)	202, 529, 617, 674, 757, 1354, 1448
HpaII	CCGG	3 cut(s)	12, 876, 1256
HphI	GGTGA	7 cut(s)	275, 284, 487, 505, 890, 1149, 1607
Hpy166II	GTNNAC	3 cut(s)	30, 1201, 1370
Hpy188I	TCNGA	9 cut(s)	420, 431, 664, 975, 1066, 1083, 1353, 1495, 1628
Hpy188III	TCNNGA	5 cut(s)	575, 988, 1011, 1050, 1445
Hpy8I	GTNNAC	3 cut(s)	30, 1201, 1370
Hpy99I	CGWCG	1 cut(s)	869
HpyAV	CCTTC	8 cut(s)	390, 436, 460, 599, 663, 838, 1232, 1623
HpyCH4III	ACNGT	1 cut(s)	994
HpyCH4IV	ACGT	1 cut(s)	176
HpyF3I	CTNAG	4 cut(s)	312, 661, 1276, 1625
HpySE526I	ACGT	1 cut(s)	176
HspAI	GCGC	3 cut(s)	461, 612, 702
KroI	GCCGGC	1 cut(s)	1255
KroNI	GCCGGC	1 cut(s)	1257
Ksp22I	TGATCA	1 cut(s)	970
KspI	CCGCGG	2 cut(s)	708, 1562
Kzo9I	GATC	9 cut(s)	631, 650, 717, 945, 970, 979, 1061, 1066, 1231
LguI	GCTCTTC	2 cut(s)	442, 459
LmnI	GCTCC	7 cut(s)	18, 26, 227, 699, 751, 889, 1447
Lsp1109I	GCAGC	7 cut(s)	202, 266, 329, 391, 621, 775, 1315
LweI	GCATC	5 cut(s)	265, 862, 1268, 1346, 1539
MaeI	CTAG	3 cut(s)	84, 893, 1209
MaeII	ACGT	1 cut(s)	176
MaeIII	GTNAC	3 cut(s)	68, 1162, 1583
MalI	GATC	9 cut(s)	633, 652, 719, 947, 972, 981, 1063, 1068, 1233
MboI	GATC	9 cut(s)	631, 650, 717, 945, 970, 979, 1061, 1066, 1231
MflI	RGATCY	1 cut(s)	979
MhlI	GDGCHC	6 cut(s)	23, 454, 1203, 1372, 1514, 1626
MlsI	TGGCCA	1 cut(s)	296
MluCI	AATT	5 cut(s)	370, 1039, 1045, 1102, 1288
MluNI	TGGCCA	1 cut(s)	296
MlyI	GAGTC	4 cut(s)	211, 523, 683, 1442
MmeI	TCCRAC	2 cut(s)	902, 1631
Mox20I	TGGCCA	1 cut(s)	296
Mph1103I	ATGCAT	1 cut(s)	542
MroNI	GCCGGC	1 cut(s)	1255
MscI	TGGCCA	1 cut(s)	296
MseI	TTAA	3 cut(s)	1242, 1304, 1482
Msp20I	TGGCCA	1 cut(s)	296
MspA1I	CMGCKG	2 cut(s)	707, 1561
MspI	CCGG	3 cut(s)	12, 876, 1256
MspR9I	CCNGG	1 cut(s)	25
Mva1269I	GAATGC	2 cut(s)	1384, 1560
MvaI	CCWGG	1 cut(s)	25
MvnI	CGCG	3 cut(s)	707, 1418, 1561
NaeI	GCCGGC	1 cut(s)	1257
NdeII	GATC	9 cut(s)	631, 650, 717, 945, 970, 979, 1061, 1066, 1231
NgoMIV	GCCGGC	1 cut(s)	1255
NlaIV	GGNNCC	2 cut(s)	1314, 1414
NmeAIII	GCCGAG	1 cut(s)	1184
NmuCI	GTSAC	2 cut(s)	68, 1162
NsiI	ATGCAT	1 cut(s)	542
NspI	RCATGY	3 cut(s)	188, 544, 1576
NspV	TTCGAA	2 cut(s)	683, 1552
PaeI	GCATGC	1 cut(s)	544
PceI	AGGCCT	1 cut(s)	379
PciI	ACATGT	1 cut(s)	184
PciSI	GCTCTTC	2 cut(s)	442, 459
PcsI	WCGNNNNNNNCGW	1 cut(s)	1034
PctI	GAATGC	2 cut(s)	1384, 1560
PdiI	GCCGGC	1 cut(s)	1257
PfeI	GAWTC	3 cut(s)	617, 757, 1354
PflFI	GACNNNGTC	1 cut(s)	731
PleI	GAGTC	4 cut(s)	210, 523, 682, 1442
PpsI	GAGTC	4 cut(s)	210, 523, 682, 1442
PscI	ACATGT	1 cut(s)	184
PshAI	GACNNNNGTC	1 cut(s)	35
PshBI	ATTAAT	1 cut(s)	1304
Psp124BI	GAGCTC	3 cut(s)	23, 454, 1626
Psp1406I	AACGTT	1 cut(s)	176
Psp6I	CCWGG	1 cut(s)	23
PspGI	CCWGG	1 cut(s)	23
PspN4I	GGNNCC	2 cut(s)	1314, 1414
PspPI	GGNCC	1 cut(s)	1413
PstI	CTGCAG	1 cut(s)	105
PstNI	CAGNNNCTG	2 cut(s)	550, 1445
PsuI	RGATCY	1 cut(s)	979
PsyI	GACNNNGTC	1 cut(s)	731
RsaI	GTAC	4 cut(s)	189, 811, 1033, 1634
RsaNI	GTAC	4 cut(s)	188, 810, 1032, 1633
SacI	GAGCTC	3 cut(s)	23, 454, 1626
SacII	CCGCGG	2 cut(s)	708, 1562
SapI	GCTCTTC	2 cut(s)	442, 459
SaqAI	TTAA	3 cut(s)	1242, 1304, 1482
Sau3AI	GATC	9 cut(s)	631, 650, 717, 945, 970, 979, 1061, 1066, 1231
Sau96I	GGNCC	1 cut(s)	1413
SchI	GAGTC	4 cut(s)	211, 523, 683, 1442
ScrFI	CCNGG	1 cut(s)	25
SduI	GDGCHC	6 cut(s)	23, 454, 1203, 1372, 1514, 1626
SfaNI	GCATC	5 cut(s)	265, 862, 1268, 1346, 1539
SfcI	CTRYAG	2 cut(s)	101, 1332
Sfr303I	CCGCGG	2 cut(s)	708, 1562
SfuI	TTCGAA	2 cut(s)	683, 1552
SgrBI	CCGCGG	2 cut(s)	708, 1562
SinI	GGWCC	1 cut(s)	1413
SphI	GCATGC	1 cut(s)	544
Sse9I	AATT	5 cut(s)	370, 1039, 1045, 1102, 1288
SseBI	AGGCCT	1 cut(s)	379
SspMI	CTAG	3 cut(s)	84, 893, 1209
SstI	GAGCTC	3 cut(s)	23, 454, 1626
StuI	AGGCCT	1 cut(s)	379
StyD4I	CCNGG	1 cut(s)	23
StyI	CCWWGG	2 cut(s)	1344, 1503
TaaI	ACNGT	1 cut(s)	994
TaiI	ACGT	1 cut(s)	179
TaqI	TCGA	7 cut(s)	238, 556, 683, 1002, 1012, 1028, 1552
TaqII	GACCGA	1 cut(s)	1347
TasI	AATT	5 cut(s)	370, 1039, 1045, 1102, 1288
TatI	WGTACW	1 cut(s)	187
TauI	GCSGC	6 cut(s)	308, 311, 341, 707, 864, 1561
TfiI	GAWTC	3 cut(s)	617, 757, 1354
Tru1I	TTAA	3 cut(s)	1242, 1304, 1482
Tru9I	TTAA	3 cut(s)	1242, 1304, 1482
TscAI	CASTG	6 cut(s)	495, 634, 643, 1471, 1594, 1624
TseFI	GTSAC	2 cut(s)	68, 1162
TseI	GCWGC	7 cut(s)	215, 254, 317, 404, 609, 788, 1328
Tsp45I	GTSAC	2 cut(s)	68, 1162
TspDTI	ATGAA	2 cut(s)	954, 1112
TspGWI	ACGGA	3 cut(s)	1168, 1314, 1551
TspRI	CASTG	6 cut(s)	495, 634, 643, 1471, 1594, 1624
Tth111I	GACNNNGTC	1 cut(s)	731
VneI	GTGCAC	2 cut(s)	1199, 1368
VpaK11BI	GGWCC	1 cut(s)	1413
VspI	ATTAAT	1 cut(s)	1304
XapI	RAATTY	1 cut(s)	1039
XceI	RCATGY	3 cut(s)	188, 544, 1576
XspI	CTAG	3 cut(s)	84, 893, 1209
Zsp2I	ATGCAT	1 cut(s)	542

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.