Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1196 |
| AccB1I | GGYRCC | 1 cut(s) | 2327 |
| AccI | GTMKAC | 2 cut(s) | 879, 1836 |
| AccIII | TCCGGA | 1 cut(s) | 1338 |
| AciI | CCGC | 2 cut(s) | 1221, 1975 |
| AclI | AACGTT | 1 cut(s) | 1008 |
| AclWI | GGATC | 5 cut(s) | 268, 721, 734, 1703, 1946 |
| AcoI | YGGCCR | 1 cut(s) | 526 |
| AcsI | RAATTY | 3 cut(s) | 1076, 1638, 2349 |
| AcuI | CTGAAG | 1 cut(s) | 1936 |
| AcvI | CACGTG | 1 cut(s) | 1775 |
| AfaI | GTAC | 9 cut(s) | 461, 769, 851, 1127, 1570, 1595, 1894, 2246, 2373 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 611 |
| AflIII | ACRYGT | 3 cut(s) | 202, 331, 1644 |
| AhlI | ACTAGT | 1 cut(s) | 1931 |
| AjiI | CACGTC | 1 cut(s) | 332 |
| AjnI | CCWGG | 2 cut(s) | 1572, 2214 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1403, 1435 |
| Alw21I | GWGCWC | 5 cut(s) | 1307, 1361, 1704, 2151, 2223 |
| Alw26I | GTCTC | 6 cut(s) | 13, 315, 322, 375, 691, 2084 |
| Alw44I | GTGCAC | 2 cut(s) | 1303, 1357 |
| AlwI | GGATC | 5 cut(s) | 268, 721, 734, 1703, 1946 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1673 |
| Ama87I | CYCGRG | 1 cut(s) | 2150 |
| Aor13HI | TCCGGA | 1 cut(s) | 1338 |
| AoxI | GGCC | 1 cut(s) | 526 |
| ApaLI | GTGCAC | 2 cut(s) | 1303, 1357 |
| ApeKI | GCWGC | 3 cut(s) | 1667, 2255, 2309 |
| ApoI | RAATTY | 3 cut(s) | 1076, 1638, 2349 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 293, 325 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 717, 1291 |
| AspS9I | GGNCC | 4 cut(s) | 602, 904, 2023, 2212 |
| AsuC2I | CCSGG | 1 cut(s) | 684 |
| AsuHPI | GGTGA | 5 cut(s) | 256, 749, 791, 800, 1211 |
| AvaI | CYCGRG | 1 cut(s) | 2150 |
| AvaII | GGWCC | 4 cut(s) | 602, 904, 2023, 2212 |
| BaeGI | GKGCMC | 2 cut(s) | 1307, 1361 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1552, 1585 |
| BalI | TGGCCA | 1 cut(s) | 528 |
| BamHI | GGATCC | 1 cut(s) | 726 |
| BanI | GGYRCC | 1 cut(s) | 2327 |
| BanII | GRGCYC | 1 cut(s) | 2151 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 159, 191 |
| BauI | CACGAG | 1 cut(s) | 312 |
| BbrPI | CACGTG | 1 cut(s) | 1775 |
| BbsI | GAAGAC | 1 cut(s) | 34 |
| Bbv12I | GWGCWC | 5 cut(s) | 1307, 1361, 1704, 2151, 2223 |
| BbvI | GCAGC | 3 cut(s) | 1679, 2267, 2296 |
| BccI | CCATC | 5 cut(s) | 734, 738, 770, 861, 2107 |
| BceAI | ACGGC | 1 cut(s) | 374 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1681, 1715 |
| BciT130I | CCWGG | 2 cut(s) | 1574, 2216 |
| BciVI | GTATCC | 1 cut(s) | 1057 |
| BcnI | CCSGG | 1 cut(s) | 684 |
| BcoDI | GTCTC | 6 cut(s) | 13, 315, 322, 375, 691, 2084 |
| BcuI | ACTAGT | 1 cut(s) | 1931 |
| BfaI | CTAG | 8 cut(s) | 512, 678, 1434, 1898, 1932, 2114, 2177, 2306 |
| BfmI | CTRYAG | 2 cut(s) | 2253, 2310 |
| BfuAI | ACCTGC | 1 cut(s) | 1196 |
| BfuI | GTATCC | 1 cut(s) | 1057 |
| BglII | AGATCT | 2 cut(s) | 127, 157 |
| BisI | GCNGC | 3 cut(s) | 1668, 2256, 2310 |
| BlsI | GCNGC | 3 cut(s) | 1669, 2257, 2311 |
| BmcAI | AGTACT | 1 cut(s) | 1595 |
| Bme1390I | CCNGG | 3 cut(s) | 684, 1574, 2216 |
| Bme18I | GGWCC | 4 cut(s) | 602, 904, 2023, 2212 |
| BmeT110I | CYCGRG | 1 cut(s) | 2150 |
| BmgBI | CACGTC | 1 cut(s) | 332 |
| BmgT120I | GGNCC | 4 cut(s) | 602, 904, 2023, 2212 |
| BmiI | GGNNCC | 4 cut(s) | 688, 728, 1425, 2329 |
| BmrFI | CCNGG | 3 cut(s) | 684, 1574, 2216 |
| BmsI | GCATC | 7 cut(s) | 179, 1077, 1648, 1679, 1778, 1780, 2119 |
| BpiI | GAAGAC | 1 cut(s) | 34 |
| BpmI | CTGGAG | 1 cut(s) | 2237 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2276 |
| BpuEI | CTTGAG | 5 cut(s) | 99, 182, 878, 1286, 2394 |
| BpuMI | CCSGG | 1 cut(s) | 684 |
| Bsa29I | ATCGAT | 1 cut(s) | 1847 |
| BsaAI | YACGTR | 2 cut(s) | 1775, 1834 |
| BsaJI | CCNNGG | 3 cut(s) | 1572, 2208, 2331 |
| BsaWI | WCCGGW | 2 cut(s) | 1338, 2025 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 611 |
| Bse118I | RCCGGY | 1 cut(s) | 65 |
| Bse1I | ACTGG | 1 cut(s) | 1911 |
| Bse3DI | GCAATG | 2 cut(s) | 474, 511 |
| BseAI | TCCGGA | 1 cut(s) | 1338 |
| BseBI | CCWGG | 2 cut(s) | 1574, 2216 |
| BseCI | ATCGAT | 1 cut(s) | 1847 |
| BseDI | CCNNGG | 3 cut(s) | 1572, 2208, 2331 |
| BseGI | GGATG | 3 cut(s) | 667, 2099, 2295 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 611 |
| BseMI | GCAATG | 2 cut(s) | 474, 511 |
| BseMII | CTCAG | 7 cut(s) | 168, 396, 404, 486, 1320, 2267, 2276 |
| BseNI | ACTGG | 1 cut(s) | 1911 |
| BseRI | GAGGAG | 1 cut(s) | 1616 |
| BseSI | GKGCMC | 2 cut(s) | 1307, 1361 |
| BseXI | GCAGC | 3 cut(s) | 1679, 2267, 2296 |
| BshFI | GGCC | 1 cut(s) | 528 |
| BshNI | GGYRCC | 1 cut(s) | 2327 |
| BshVI | ATCGAT | 1 cut(s) | 1847 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1307, 1361, 1704, 2151, 2223 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2150 |
| BsiSI | CCGG | 7 cut(s) | 66, 87, 105, 684, 1339, 1721, 2026 |
| BsiWI | CGTACG | 1 cut(s) | 1125 |
| BslFI | GGGAC | 2 cut(s) | 666, 1633 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 611 |
| BsmAI | GTCTC | 6 cut(s) | 13, 315, 322, 375, 691, 2084 |
| BsmBI | CGTCTC | 1 cut(s) | 322 |
| BsmFI | GGGAC | 2 cut(s) | 666, 1633 |
| BsmI | GAATGC | 2 cut(s) | 1832, 2258 |
| BsnI | GGCC | 1 cut(s) | 528 |
| BsoBI | CYCGRG | 1 cut(s) | 2150 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1307, 1361, 1704, 2151, 2223 |
| Bsp13I | TCCGGA | 1 cut(s) | 1338 |
| Bsp1407I | TGTACA | 1 cut(s) | 2371 |
| BspACI | CCGC | 2 cut(s) | 1221, 1975 |
| BspANI | GGCC | 1 cut(s) | 528 |
| BspCNI | CTCAG | 7 cut(s) | 167, 397, 403, 487, 1321, 2268, 2277 |
| BspDI | ATCGAT | 1 cut(s) | 1847 |
| BspEI | TCCGGA | 1 cut(s) | 1338 |
| BspLI | GGNNCC | 4 cut(s) | 688, 728, 1425, 2329 |
| BspMAI | CTGCAG | 2 cut(s) | 2257, 2314 |
| BspMI | ACCTGC | 1 cut(s) | 1196 |
| BspPI | GGATC | 5 cut(s) | 268, 721, 734, 1703, 1946 |
| BspT107I | GGYRCC | 1 cut(s) | 2327 |
| BsrDI | GCAATG | 2 cut(s) | 474, 511 |
| BsrFI | RCCGGY | 1 cut(s) | 65 |
| BsrGI | TGTACA | 1 cut(s) | 2371 |
| BsrI | ACTGG | 1 cut(s) | 1911 |
| BssAI | RCCGGY | 1 cut(s) | 65 |
| BssECI | CCNNGG | 3 cut(s) | 1572, 2208, 2331 |
| BssSI | CACGAG | 1 cut(s) | 312 |
| BssT1I | CCWWGG | 2 cut(s) | 2208, 2331 |
| Bst2BI | CACGAG | 1 cut(s) | 312 |
| Bst2UI | CCWGG | 2 cut(s) | 1574, 2216 |
| Bst4CI | ACNGT | 6 cut(s) | 350, 788, 1057, 1568, 1946, 2225 |
| Bst6I | CTCTTC | 3 cut(s) | 142, 154, 612 |
| BstAUI | TGTACA | 1 cut(s) | 2371 |
| BstBAI | YACGTR | 2 cut(s) | 1775, 1834 |
| BstC8I | GCNNGC | 4 cut(s) | 492, 825, 1522, 1614 |
| BstF5I | GGATG | 3 cut(s) | 667, 2099, 2295 |
| BstMAI | GTCTC | 6 cut(s) | 13, 315, 322, 375, 691, 2084 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1667 |
| BstNI | CCWGG | 2 cut(s) | 1574, 2216 |
| BstNSI | RCATGY | 7 cut(s) | 206, 494, 1250, 1441, 1648, 2195, 2199 |
| BstSCI | CCNGG | 3 cut(s) | 682, 1572, 2214 |
| BstSFI | CTRYAG | 2 cut(s) | 2253, 2310 |
| BstSLI | GKGCMC | 2 cut(s) | 1307, 1361 |
| BstV1I | GCAGC | 3 cut(s) | 1679, 2267, 2296 |
| BstV2I | GAAGAC | 1 cut(s) | 34 |
| BstX2I | RGATCY | 5 cut(s) | 127, 157, 273, 726, 1708 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2215, 2338 |
| BstYI | RGATCY | 5 cut(s) | 127, 157, 273, 726, 1708 |
| Bsu15I | ATCGAT | 1 cut(s) | 1847 |
| BsuI | GTATCC | 1 cut(s) | 1057 |
| BsuRI | GGCC | 1 cut(s) | 528 |
| BsuTUI | ATCGAT | 1 cut(s) | 1847 |
| BtgZI | GCGATG | 1 cut(s) | 85 |
| BtrI | CACGTC | 1 cut(s) | 332 |
| BtsCI | GGATG | 3 cut(s) | 667, 2099, 2295 |
| BtsI | GCAGTG | 1 cut(s) | 1170 |
| BtsIMutI | CAGTG | 2 cut(s) | 402, 1170 |
| BveI | ACCTGC | 1 cut(s) | 1196 |
| Cac8I | GCNNGC | 4 cut(s) | 492, 825, 1522, 1614 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1673 |
| Cfr10I | RCCGGY | 1 cut(s) | 65 |
| Cfr13I | GGNCC | 4 cut(s) | 602, 904, 2023, 2212 |
| ClaI | ATCGAT | 1 cut(s) | 1847 |
| CseI | GACGC | 1 cut(s) | 1589 |
| Csp6I | GTAC | 9 cut(s) | 460, 768, 850, 1126, 1569, 1594, 1893, 2245, 2372 |
| CviAII | CATG | 8 cut(s) | 203, 491, 1091, 1247, 1438, 1645, 2192, 2196 |
| CviQI | GTAC | 9 cut(s) | 460, 768, 850, 1126, 1569, 1594, 1893, 2245, 2372 |
| DraI | TTTAAA | 2 cut(s) | 249, 1407 |
| EaeI | YGGCCR | 1 cut(s) | 526 |
| Eam1104I | CTCTTC | 3 cut(s) | 142, 154, 612 |
| EarI | CTCTTC | 3 cut(s) | 142, 154, 612 |
| Ecl136II | GAGCTC | 1 cut(s) | 2149 |
| Eco130I | CCWWGG | 2 cut(s) | 2208, 2331 |
| Eco24I | GRGCYC | 1 cut(s) | 2151 |
| Eco32I | GATATC | 2 cut(s) | 1218, 1228 |
| Eco47I | GGWCC | 4 cut(s) | 602, 904, 2023, 2212 |
| Eco53kI | GAGCTC | 1 cut(s) | 2149 |
| Eco57I | CTGAAG | 1 cut(s) | 1936 |
| Eco72I | CACGTG | 1 cut(s) | 1775 |
| Eco88I | CYCGRG | 1 cut(s) | 2150 |
| EcoICRI | GAGCTC | 1 cut(s) | 2149 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2212 |
| EcoRII | CCWGG | 2 cut(s) | 1572, 2214 |
| EcoRV | GATATC | 2 cut(s) | 1218, 1228 |
| EcoT14I | CCWWGG | 2 cut(s) | 2208, 2331 |
| EcoT22I | ATGCAT | 3 cut(s) | 1092, 1663, 2197 |
| EcoT38I | GRGCYC | 1 cut(s) | 2151 |
| ErhI | CCWWGG | 2 cut(s) | 2208, 2331 |
| Esp3I | CGTCTC | 1 cut(s) | 322 |
| FaeI | CATG | 8 cut(s) | 206, 494, 1094, 1250, 1441, 1648, 2195, 2199 |
| FaqI | GGGAC | 2 cut(s) | 666, 1633 |
| FatI | CATG | 8 cut(s) | 202, 490, 1090, 1246, 1437, 1644, 2191, 2195 |
| FauNDI | CATATG | 1 cut(s) | 1663 |
| FblI | GTMKAC | 2 cut(s) | 879, 1836 |
| Fnu4HI | GCNGC | 3 cut(s) | 1668, 2256, 2310 |
| FokI | GGATG | 3 cut(s) | 674, 2086, 2302 |
| FriOI | GRGCYC | 1 cut(s) | 2151 |
| Fsp4HI | GCNGC | 3 cut(s) | 1668, 2256, 2310 |
| FspBI | CTAG | 8 cut(s) | 512, 678, 1434, 1898, 1932, 2114, 2177, 2306 |
| GluI | GCNGC | 3 cut(s) | 1668, 2256, 2310 |
| GsuI | CTGGAG | 1 cut(s) | 2237 |
| HaeIII | GGCC | 1 cut(s) | 528 |
| HapII | CCGG | 7 cut(s) | 66, 87, 105, 684, 1339, 1721, 2026 |
| HgaI | GACGC | 1 cut(s) | 1589 |
| Hin1II | CATG | 8 cut(s) | 206, 494, 1094, 1250, 1441, 1648, 2195, 2199 |
| HincII | GTYRAC | 1 cut(s) | 19 |
| HindII | GTYRAC | 1 cut(s) | 19 |
| HindIII | AAGCTT | 3 cut(s) | 25, 793, 1133 |
| HpaI | GTTAAC | 1 cut(s) | 19 |
| HpaII | CCGG | 7 cut(s) | 66, 87, 105, 684, 1339, 1721, 2026 |
| HphI | GGTGA | 5 cut(s) | 256, 749, 791, 800, 1211 |
| Hpy166II | GTNNAC | 7 cut(s) | 19, 337, 481, 880, 1305, 1359, 1837 |
| Hpy188I | TCNGA | 9 cut(s) | 157, 217, 393, 904, 1015, 1873, 1955, 2286, 2323 |
| Hpy8I | GTNNAC | 7 cut(s) | 19, 337, 481, 880, 1305, 1359, 1837 |
| Hpy99I | CGWCG | 2 cut(s) | 904, 1946 |
| HpyAV | CCTTC | 8 cut(s) | 532, 989, 1122, 1373, 1507, 1681, 2172, 2318 |
| HpyCH4III | ACNGT | 6 cut(s) | 350, 788, 1057, 1568, 1946, 2225 |
| HpyCH4IV | ACGT | 6 cut(s) | 331, 1008, 1351, 1774, 1833, 2271 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1667 |
| HpySE526I | ACGT | 6 cut(s) | 331, 1008, 1351, 1774, 1833, 2271 |
| Hsp92II | CATG | 8 cut(s) | 206, 494, 1094, 1250, 1441, 1648, 2195, 2199 |
| Kpn2I | TCCGGA | 1 cut(s) | 1338 |
| KspAI | GTTAAC | 1 cut(s) | 19 |
| LmnI | GCTCC | 3 cut(s) | 976, 1341, 2218 |
| Lsp1109I | GCAGC | 3 cut(s) | 1679, 2267, 2296 |
| LweI | GCATC | 7 cut(s) | 179, 1077, 1648, 1679, 1778, 1780, 2119 |
| MaeI | CTAG | 8 cut(s) | 512, 678, 1434, 1898, 1932, 2114, 2177, 2306 |
| MaeII | ACGT | 6 cut(s) | 331, 1008, 1351, 1774, 1833, 2271 |
| MaeIII | GTNAC | 8 cut(s) | 198, 205, 354, 451, 704, 1151, 1168, 1242 |
| MfeI | CAATTG | 3 cut(s) | 78, 771, 1444 |
| MflI | RGATCY | 5 cut(s) | 127, 157, 273, 726, 1708 |
| MhlI | GDGCHC | 5 cut(s) | 1307, 1361, 1704, 2151, 2223 |
| MlsI | TGGCCA | 1 cut(s) | 528 |
| MluNI | TGGCCA | 1 cut(s) | 528 |
| MlyI | GAGTC | 2 cut(s) | 377, 1148 |
| MmeI | TCCRAC | 3 cut(s) | 882, 1076, 1916 |
| Mox20I | TGGCCA | 1 cut(s) | 528 |
| Mph1103I | ATGCAT | 3 cut(s) | 1092, 1663, 2197 |
| MroI | TCCGGA | 1 cut(s) | 1338 |
| MroXI | GAANNNNTTC | 2 cut(s) | 717, 1291 |
| MscI | TGGCCA | 1 cut(s) | 528 |
| MslI | CAYNNNNRTG | 4 cut(s) | 735, 1803, 2048, 2196 |
| Msp20I | TGGCCA | 1 cut(s) | 528 |
| MspI | CCGG | 7 cut(s) | 66, 87, 105, 684, 1339, 1721, 2026 |
| MspR9I | CCNGG | 3 cut(s) | 684, 1574, 2216 |
| MunI | CAATTG | 3 cut(s) | 78, 771, 1444 |
| Mva1269I | GAATGC | 2 cut(s) | 1832, 2258 |
| MvaI | CCWGG | 2 cut(s) | 1574, 2216 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1667 |
| NciI | CCSGG | 1 cut(s) | 684 |
| NdeI | CATATG | 1 cut(s) | 1663 |
| NlaIII | CATG | 8 cut(s) | 206, 494, 1094, 1250, 1441, 1648, 2195, 2199 |
| NlaIV | GGNNCC | 4 cut(s) | 688, 728, 1425, 2329 |
| NmuCI | GTSAC | 4 cut(s) | 354, 451, 1151, 1168 |
| NsiI | ATGCAT | 3 cut(s) | 1092, 1663, 2197 |
| NspI | RCATGY | 7 cut(s) | 206, 494, 1250, 1441, 1648, 2195, 2199 |
| PaeI | GCATGC | 1 cut(s) | 494 |
| PciI | ACATGT | 2 cut(s) | 202, 1644 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 296 |
| PctI | GAATGC | 2 cut(s) | 1832, 2258 |
| PdmI | GAANNNNTTC | 2 cut(s) | 717, 1291 |
| PfeI | GAWTC | 8 cut(s) | 71, 950, 966, 1287, 1365, 1535, 1874, 2318 |
| Pfl23II | CGTACG | 1 cut(s) | 1125 |
| PkrI | GCNGC | 3 cut(s) | 1669, 2257, 2311 |
| PleI | GAGTC | 2 cut(s) | 377, 1148 |
| PmaCI | CACGTG | 1 cut(s) | 1775 |
| PmlI | CACGTG | 1 cut(s) | 1775 |
| PpsI | GAGTC | 2 cut(s) | 377, 1148 |
| Ppu21I | YACGTR | 2 cut(s) | 1775, 1834 |
| PpuMI | RGGWCCY | 1 cut(s) | 2212 |
| PscI | ACATGT | 2 cut(s) | 202, 1644 |
| Psp124BI | GAGCTC | 1 cut(s) | 2151 |
| Psp1406I | AACGTT | 1 cut(s) | 1008 |
| Psp5II | RGGWCCY | 1 cut(s) | 2212 |
| Psp6I | CCWGG | 2 cut(s) | 1572, 2214 |
| PspCI | CACGTG | 1 cut(s) | 1775 |
| PspGI | CCWGG | 2 cut(s) | 1572, 2214 |
| PspLI | CGTACG | 1 cut(s) | 1125 |
| PspN4I | GGNNCC | 4 cut(s) | 688, 728, 1425, 2329 |
| PspPI | GGNCC | 4 cut(s) | 602, 904, 2023, 2212 |
| PspPPI | RGGWCCY | 1 cut(s) | 2212 |
| PstI | CTGCAG | 2 cut(s) | 2257, 2314 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1673 |
| PsuI | RGATCY | 5 cut(s) | 127, 157, 273, 726, 1708 |
| RsaI | GTAC | 9 cut(s) | 461, 769, 851, 1127, 1570, 1595, 1894, 2246, 2373 |
| RsaNI | GTAC | 9 cut(s) | 460, 768, 850, 1126, 1569, 1594, 1893, 2245, 2372 |
| RseI | CAYNNNNRTG | 4 cut(s) | 735, 1803, 2048, 2196 |
| SacI | GAGCTC | 1 cut(s) | 2151 |
| SatI | GCNGC | 3 cut(s) | 1668, 2256, 2310 |
| Sau96I | GGNCC | 4 cut(s) | 602, 904, 2023, 2212 |
| ScaI | AGTACT | 1 cut(s) | 1595 |
| SchI | GAGTC | 2 cut(s) | 377, 1148 |
| ScrFI | CCNGG | 3 cut(s) | 684, 1574, 2216 |
| SduI | GDGCHC | 5 cut(s) | 1307, 1361, 1704, 2151, 2223 |
| SfaNI | GCATC | 7 cut(s) | 179, 1077, 1648, 1679, 1778, 1780, 2119 |
| SfcI | CTRYAG | 2 cut(s) | 2253, 2310 |
| SgrAI | CRCCGGYG | 1 cut(s) | 65 |
| SinI | GGWCC | 4 cut(s) | 602, 904, 2023, 2212 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 735, 1803, 2048, 2196 |
| SmlI | CTYRAG | 5 cut(s) | 114, 161, 857, 1265, 2409 |
| SmoI | CTYRAG | 5 cut(s) | 114, 161, 857, 1265, 2409 |
| SpeI | ACTAGT | 1 cut(s) | 1931 |
| SphI | GCATGC | 1 cut(s) | 494 |
| SsiI | CCGC | 2 cut(s) | 1221, 1975 |
| SspMI | CTAG | 8 cut(s) | 512, 678, 1434, 1898, 1932, 2114, 2177, 2306 |
| SstI | GAGCTC | 1 cut(s) | 2151 |
| StyD4I | CCNGG | 3 cut(s) | 682, 1572, 2214 |
| StyI | CCWWGG | 2 cut(s) | 2208, 2331 |
| TaaI | ACNGT | 6 cut(s) | 350, 788, 1057, 1568, 1946, 2225 |
| TaiI | ACGT | 6 cut(s) | 334, 1011, 1354, 1777, 1836, 2274 |
| TaqI | TCGA | 6 cut(s) | 184, 191, 1157, 1847, 1941, 2385 |
| TatI | WGTACW | 4 cut(s) | 459, 767, 1593, 2371 |
| TfiI | GAWTC | 8 cut(s) | 71, 950, 966, 1287, 1365, 1535, 1874, 2318 |
| TscAI | CASTG | 2 cut(s) | 409, 1177 |
| TseFI | GTSAC | 4 cut(s) | 354, 451, 1151, 1168 |
| TseI | GCWGC | 3 cut(s) | 1667, 2255, 2309 |
| Tsp45I | GTSAC | 4 cut(s) | 354, 451, 1151, 1168 |
| TspGWI | ACGGA | 2 cut(s) | 679, 2029 |
| TspRI | CASTG | 2 cut(s) | 409, 1177 |
| VneI | GTGCAC | 2 cut(s) | 1303, 1357 |
| VpaK11BI | GGWCC | 4 cut(s) | 602, 904, 2023, 2212 |
| XapI | RAATTY | 3 cut(s) | 1076, 1638, 2349 |
| XbaI | TCTAGA | 2 cut(s) | 511, 2176 |
| XceI | RCATGY | 7 cut(s) | 206, 494, 1250, 1441, 1648, 2195, 2199 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 737 |
| XmiI | GTMKAC | 2 cut(s) | 879, 1836 |
| XmnI | GAANNNNTTC | 2 cut(s) | 717, 1291 |
| XspI | CTAG | 8 cut(s) | 512, 678, 1434, 1898, 1932, 2114, 2177, 2306 |
| ZrmI | AGTACT | 1 cut(s) | 1595 |
| Zsp2I | ATGCAT | 3 cut(s) | 1092, 1663, 2197 |