Pentatricopeptide repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_long | PF17177 | 373 - 534 | 1.8e-12 | Pentacotripeptide-repeat region of PRORP |
| TPR_24 | PF23276 | 445 - 560 | 2.4e-06 | Fungal tetratrico peptide repeats |
| PPR_3 | PF13812 | 460 - 518 | 2.5e-07 | Pentatricopeptide repeat domain |
| PPR_2 | PF13041 | 471 - 518 | 2e-10 | PPR repeat family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1838 |
| Acc36I | ACCTGC | 1 cut(s) | 1990 |
| AccB1I | GGYRCC | 1 cut(s) | 1367 |
| AccI | GTMKAC | 2 cut(s) | 363, 2087 |
| AccII | CGCG | 1 cut(s) | 303 |
| AciI | CCGC | 7 cut(s) | 72, 177, 286, 566, 1040, 1137, 2241 |
| AclWI | GGATC | 3 cut(s) | 719, 1907, 2019 |
| AcsI | RAATTY | 9 cut(s) | 113, 534, 962, 1033, 1061, 1272, 1402, 1605, 1701 |
| AcuI | CTGAAG | 1 cut(s) | 1581 |
| AcyI | GRCGYC | 2 cut(s) | 102, 1409 |
| AdeI | CACNNNGTG | 1 cut(s) | 818 |
| AfaI | GTAC | 4 cut(s) | 184, 1427, 1686, 2023 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 835 |
| AflII | CTTAAG | 2 cut(s) | 1145, 2263 |
| AflIII | ACRYGT | 2 cut(s) | 366, 1575 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1985 |
| AjnI | CCWGG | 2 cut(s) | 198, 915 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1610, 1642 |
| AleI | CACNNNNGTG | 1 cut(s) | 2184 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 546, 578 |
| Alw21I | GWGCWC | 2 cut(s) | 747, 1854 |
| Alw26I | GTCTC | 3 cut(s) | 124, 1895, 2168 |
| AlwI | GGATC | 3 cut(s) | 719, 1907, 2019 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 978 |
| AoxI | GGCC | 2 cut(s) | 2104, 2140 |
| ApeKI | GCWGC | 4 cut(s) | 145, 983, 1418, 1652 |
| ApoI | RAATTY | 9 cut(s) | 113, 534, 962, 1033, 1061, 1272, 1402, 1605, 1701 |
| AspLEI | GCGC | 1 cut(s) | 285 |
| AspS9I | GGNCC | 2 cut(s) | 587, 952 |
| AsuHPI | GGTGA | 5 cut(s) | 876, 1102, 1183, 1259, 2137 |
| AvaII | GGWCC | 2 cut(s) | 587, 952 |
| BanI | GGYRCC | 1 cut(s) | 1367 |
| BanII | GRGCYC | 1 cut(s) | 747 |
| Bbv12I | GWGCWC | 2 cut(s) | 747, 1854 |
| BbvI | GCAGC | 4 cut(s) | 157, 995, 1405, 1664 |
| BccI | CCATC | 5 cut(s) | 47, 764, 1201, 1545, 1925 |
| BceAI | ACGGC | 1 cut(s) | 1970 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 262, 296, 353, 387 |
| BciT130I | CCWGG | 2 cut(s) | 200, 917 |
| BciVI | GTATCC | 2 cut(s) | 353, 683 |
| BcoDI | GTCTC | 3 cut(s) | 124, 1895, 2168 |
| BfaI | CTAG | 6 cut(s) | 141, 383, 480, 1236, 2039, 2108 |
| BfmI | CTRYAG | 2 cut(s) | 1009, 1372 |
| BfrI | CTTAAG | 2 cut(s) | 1145, 2263 |
| BfuAI | ACCTGC | 1 cut(s) | 1990 |
| BfuI | GTATCC | 2 cut(s) | 353, 683 |
| BglII | AGATCT | 1 cut(s) | 2200 |
| BisI | GCNGC | 6 cut(s) | 146, 286, 984, 1419, 1653, 2241 |
| BlpI | GCTNAGC | 2 cut(s) | 17, 34 |
| BlsI | GCNGC | 6 cut(s) | 147, 287, 985, 1420, 1654, 2242 |
| Bme1390I | CCNGG | 2 cut(s) | 200, 917 |
| Bme18I | GGWCC | 2 cut(s) | 587, 952 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1985 |
| BmgT120I | GGNCC | 2 cut(s) | 587, 952 |
| BmiI | GGNNCC | 3 cut(s) | 926, 1369, 1824 |
| BmrFI | CCNGG | 2 cut(s) | 200, 917 |
| BmsI | GCATC | 6 cut(s) | 202, 264, 455, 1763, 1765, 1802 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 17, 34 |
| BpuEI | CTTGAG | 5 cut(s) | 1106, 1184, 1919, 1960, 2018 |
| Bsa29I | ATCGAT | 1 cut(s) | 207 |
| BsaAI | YACGTR | 1 cut(s) | 902 |
| BsaHI | GRCGYC | 2 cut(s) | 102, 1409 |
| BsaJI | CCNNGG | 4 cut(s) | 96, 245, 916, 1291 |
| BsaWI | WCCGGW | 3 cut(s) | 828, 886, 1469 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 38, 68 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 835 |
| Bse1I | ACTGG | 2 cut(s) | 972, 1706 |
| Bse3DI | GCAATG | 1 cut(s) | 278 |
| BseBI | CCWGG | 2 cut(s) | 200, 917 |
| BseCI | ATCGAT | 1 cut(s) | 207 |
| BseDI | CCNNGG | 4 cut(s) | 96, 245, 916, 1291 |
| BseGI | GGATG | 2 cut(s) | 1054, 1817 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 835 |
| BseMI | GCAATG | 1 cut(s) | 278 |
| BseMII | CTCAG | 4 cut(s) | 48, 350, 1373, 2020 |
| BseNI | ACTGG | 2 cut(s) | 972, 1706 |
| BseRI | GAGGAG | 4 cut(s) | 46, 49, 52, 1880 |
| BseXI | GCAGC | 4 cut(s) | 157, 995, 1405, 1664 |
| BsgI | GTGCAG | 1 cut(s) | 1002 |
| Bsh1236I | CGCG | 1 cut(s) | 303 |
| BshFI | GGCC | 2 cut(s) | 2106, 2142 |
| BshNI | GGYRCC | 1 cut(s) | 1367 |
| BshVI | ATCGAT | 1 cut(s) | 207 |
| BsiHKAI | GWGCWC | 2 cut(s) | 747, 1854 |
| BsiSI | CCGG | 3 cut(s) | 829, 887, 1470 |
| BslFI | GGGAC | 2 cut(s) | 170, 400 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 835 |
| BsmAI | GTCTC | 3 cut(s) | 124, 1895, 2168 |
| BsmBI | CGTCTC | 1 cut(s) | 124 |
| BsmFI | GGGAC | 2 cut(s) | 170, 400 |
| BsmI | GAATGC | 1 cut(s) | 1026 |
| BsnI | GGCC | 2 cut(s) | 2106, 2142 |
| Bsp1286I | GDGCHC | 2 cut(s) | 747, 1854 |
| Bsp1407I | TGTACA | 1 cut(s) | 1425 |
| Bsp143I | GATC | 7 cut(s) | 711, 1005, 1598, 1797, 1912, 2011, 2200 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 17, 34 |
| Bsp19I | CCATGG | 1 cut(s) | 245 |
| Bsp68I | TCGCGA | 1 cut(s) | 303 |
| BspACI | CCGC | 7 cut(s) | 72, 177, 286, 566, 1040, 1137, 2241 |
| BspANI | GGCC | 2 cut(s) | 2106, 2142 |
| BspCNI | CTCAG | 4 cut(s) | 47, 349, 1374, 2019 |
| BspDI | ATCGAT | 1 cut(s) | 207 |
| BspFNI | CGCG | 1 cut(s) | 303 |
| BspLI | GGNNCC | 3 cut(s) | 926, 1369, 1824 |
| BspMI | ACCTGC | 1 cut(s) | 1990 |
| BspPI | GGATC | 3 cut(s) | 719, 1907, 2019 |
| BspT107I | GGYRCC | 1 cut(s) | 1367 |
| BspTI | CTTAAG | 2 cut(s) | 1145, 2263 |
| BsrDI | GCAATG | 1 cut(s) | 278 |
| BsrGI | TGTACA | 1 cut(s) | 1425 |
| BsrI | ACTGG | 2 cut(s) | 972, 1706 |
| BssECI | CCNNGG | 4 cut(s) | 96, 245, 916, 1291 |
| BssMI | GATC | 7 cut(s) | 711, 1005, 1598, 1797, 1912, 2011, 2200 |
| BssNI | GRCGYC | 2 cut(s) | 102, 1409 |
| BssT1I | CCWWGG | 1 cut(s) | 245 |
| Bst2UI | CCWGG | 2 cut(s) | 200, 917 |
| Bst4CI | ACNGT | 4 cut(s) | 174, 980, 1133, 1665 |
| Bst6I | CTCTTC | 6 cut(s) | 70, 418, 567, 1557, 1788, 2123 |
| BstACI | GRCGYC | 2 cut(s) | 102, 1409 |
| BstAFI | CTTAAG | 2 cut(s) | 1145, 2263 |
| BstAUI | TGTACA | 1 cut(s) | 1425 |
| BstBAI | YACGTR | 1 cut(s) | 902 |
| BstC8I | GCNNGC | 4 cut(s) | 1379, 1806, 2245, 2249 |
| BstDEI | CTNAG | 7 cut(s) | 17, 34, 336, 853, 1382, 1690, 2006 |
| BstDSI | CCRYGG | 1 cut(s) | 245 |
| BstF5I | GGATG | 2 cut(s) | 1054, 1817 |
| BstFNI | CGCG | 1 cut(s) | 303 |
| BstHHI | GCGC | 1 cut(s) | 285 |
| BstKTI | GATC | 7 cut(s) | 714, 1008, 1601, 1800, 1915, 2014, 2203 |
| BstMAI | GTCTC | 3 cut(s) | 124, 1895, 2168 |
| BstMBI | GATC | 7 cut(s) | 711, 1005, 1598, 1797, 1912, 2011, 2200 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 101, 485, 642, 1439, 1652 |
| BstNI | CCWGG | 2 cut(s) | 200, 917 |
| BstNSI | RCATGY | 4 cut(s) | 370, 1157, 1381, 1579 |
| BstSCI | CCNGG | 2 cut(s) | 198, 915 |
| BstSFI | CTRYAG | 2 cut(s) | 1009, 1372 |
| BstUI | CGCG | 1 cut(s) | 303 |
| BstV1I | GCAGC | 4 cut(s) | 157, 995, 1405, 1664 |
| BstX2I | RGATCY | 1 cut(s) | 2200 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1923 |
| BstYI | RGATCY | 1 cut(s) | 2200 |
| Bsu15I | ATCGAT | 1 cut(s) | 207 |
| BsuI | GTATCC | 2 cut(s) | 353, 683 |
| BsuRI | GGCC | 2 cut(s) | 2106, 2142 |
| BsuTUI | ATCGAT | 1 cut(s) | 207 |
| BtgI | CCRYGG | 1 cut(s) | 245 |
| BtgZI | GCGATG | 1 cut(s) | 287 |
| BtsCI | GGATG | 2 cut(s) | 1054, 1817 |
| BtsI | GCAGTG | 1 cut(s) | 2190 |
| BtsIMutI | CAGTG | 3 cut(s) | 979, 1287, 2190 |
| BtuMI | TCGCGA | 1 cut(s) | 303 |
| BveI | ACCTGC | 1 cut(s) | 1990 |
| Cac8I | GCNNGC | 4 cut(s) | 1379, 1806, 2245, 2249 |
| CaiI | CAGNNNCTG | 1 cut(s) | 978 |
| CfoI | GCGC | 1 cut(s) | 285 |
| Cfr13I | GGNCC | 2 cut(s) | 587, 952 |
| ClaI | ATCGAT | 1 cut(s) | 207 |
| CseI | GACGC | 2 cut(s) | 110, 1417 |
| Csp6I | GTAC | 4 cut(s) | 183, 1426, 1685, 2022 |
| CviQI | GTAC | 4 cut(s) | 183, 1426, 1685, 2022 |
| DdeI | CTNAG | 7 cut(s) | 17, 34, 336, 853, 1382, 1690, 2006 |
| DpnI | GATC | 7 cut(s) | 713, 1007, 1600, 1799, 1914, 2013, 2202 |
| DpnII | GATC | 7 cut(s) | 711, 1005, 1598, 1797, 1912, 2011, 2200 |
| DraI | TTTAAA | 3 cut(s) | 910, 967, 1066 |
| DraIII | CACNNNGTG | 1 cut(s) | 818 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1985 |
| Eam1104I | CTCTTC | 6 cut(s) | 70, 418, 567, 1557, 1788, 2123 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1985 |
| EarI | CTCTTC | 6 cut(s) | 70, 418, 567, 1557, 1788, 2123 |
| EciI | GGCGGA | 1 cut(s) | 61 |
| Ecl136II | GAGCTC | 1 cut(s) | 745 |
| Eco130I | CCWWGG | 1 cut(s) | 245 |
| Eco24I | GRGCYC | 1 cut(s) | 747 |
| Eco32I | GATATC | 1 cut(s) | 196 |
| Eco47I | GGWCC | 2 cut(s) | 587, 952 |
| Eco53kI | GAGCTC | 1 cut(s) | 745 |
| Eco57I | CTGAAG | 1 cut(s) | 1581 |
| EcoICRI | GAGCTC | 1 cut(s) | 745 |
| EcoO109I | RGGNCCY | 1 cut(s) | 952 |
| EcoRI | GAATTC | 2 cut(s) | 1605, 1701 |
| EcoRII | CCWGG | 2 cut(s) | 198, 915 |
| EcoRV | GATATC | 1 cut(s) | 196 |
| EcoT14I | CCWWGG | 1 cut(s) | 245 |
| EcoT22I | ATGCAT | 4 cut(s) | 454, 470, 1648, 1780 |
| EcoT38I | GRGCYC | 1 cut(s) | 747 |
| ErhI | CCWWGG | 1 cut(s) | 245 |
| Esp3I | CGTCTC | 1 cut(s) | 124 |
| FaqI | GGGAC | 2 cut(s) | 170, 400 |
| FauI | CCCGC | 1 cut(s) | 573 |
| FauNDI | CATATG | 5 cut(s) | 516, 583, 1111, 1648, 1789 |
| FblI | GTMKAC | 2 cut(s) | 363, 2087 |
| Fnu4HI | GCNGC | 6 cut(s) | 146, 286, 984, 1419, 1653, 2241 |
| FokI | GGATG | 2 cut(s) | 1061, 1824 |
| FriOI | GRGCYC | 1 cut(s) | 747 |
| Fsp4HI | GCNGC | 6 cut(s) | 146, 286, 984, 1419, 1653, 2241 |
| FspBI | CTAG | 6 cut(s) | 141, 383, 480, 1236, 2039, 2108 |
| GlaI | GCGC | 1 cut(s) | 284 |
| GluI | GCNGC | 6 cut(s) | 146, 286, 984, 1419, 1653, 2241 |
| HaeIII | GGCC | 2 cut(s) | 2106, 2142 |
| HapII | CCGG | 3 cut(s) | 829, 887, 1470 |
| HgaI | GACGC | 2 cut(s) | 110, 1417 |
| HhaI | GCGC | 1 cut(s) | 285 |
| Hin1I | GRCGYC | 2 cut(s) | 102, 1409 |
| Hin6I | GCGC | 1 cut(s) | 283 |
| HinP1I | GCGC | 1 cut(s) | 283 |
| HincII | GTYRAC | 1 cut(s) | 364 |
| HindII | GTYRAC | 1 cut(s) | 364 |
| HindIII | AAGCTT | 2 cut(s) | 1118, 2266 |
| HinfI | GANTC | 8 cut(s) | 134, 218, 717, 736, 935, 1520, 2078, 2084 |
| HpaII | CCGG | 3 cut(s) | 829, 887, 1470 |
| HphI | GGTGA | 5 cut(s) | 876, 1102, 1183, 1259, 2137 |
| Hpy166II | GTNNAC | 6 cut(s) | 364, 778, 1142, 1267, 1661, 2088 |
| Hpy188I | TCNGA | 9 cut(s) | 130, 716, 1032, 1186, 1454, 1561, 1774, 1864, 2083 |
| Hpy8I | GTNNAC | 6 cut(s) | 364, 778, 1142, 1267, 1661, 2088 |
| HpyCH4III | ACNGT | 4 cut(s) | 174, 980, 1133, 1665 |
| HpyCH4IV | ACGT | 1 cut(s) | 901 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 101, 485, 642, 1439, 1652 |
| HpyF3I | CTNAG | 7 cut(s) | 17, 34, 336, 853, 1382, 1690, 2006 |
| HpySE526I | ACGT | 1 cut(s) | 901 |
| Hsp92I | GRCGYC | 2 cut(s) | 102, 1409 |
| HspAI | GCGC | 1 cut(s) | 283 |
| Kzo9I | GATC | 7 cut(s) | 711, 1005, 1598, 1797, 1912, 2011, 2200 |
| LmnI | GCTCC | 4 cut(s) | 476, 493, 930, 1822 |
| Lsp1109I | GCAGC | 4 cut(s) | 157, 995, 1405, 1664 |
| LweI | GCATC | 6 cut(s) | 202, 264, 455, 1763, 1765, 1802 |
| MaeI | CTAG | 6 cut(s) | 141, 383, 480, 1236, 2039, 2108 |
| MaeII | ACGT | 1 cut(s) | 901 |
| MaeIII | GTNAC | 8 cut(s) | 764, 824, 974, 1090, 1250, 1612, 1964, 2188 |
| MalI | GATC | 7 cut(s) | 713, 1007, 1600, 1799, 1914, 2013, 2202 |
| MboI | GATC | 7 cut(s) | 711, 1005, 1598, 1797, 1912, 2011, 2200 |
| MfeI | CAATTG | 1 cut(s) | 1766 |
| MflI | RGATCY | 1 cut(s) | 2200 |
| MhlI | GDGCHC | 2 cut(s) | 747, 1854 |
| MlyI | GAGTC | 3 cut(s) | 726, 944, 2093 |
| MmeI | TCCRAC | 1 cut(s) | 484 |
| Mph1103I | ATGCAT | 4 cut(s) | 454, 470, 1648, 1780 |
| MslI | CAYNNNNRTG | 4 cut(s) | 617, 1574, 2158, 2184 |
| MspA1I | CMGCKG | 2 cut(s) | 1418, 2243 |
| MspCI | CTTAAG | 2 cut(s) | 1145, 2263 |
| MspI | CCGG | 3 cut(s) | 829, 887, 1470 |
| MspR9I | CCNGG | 2 cut(s) | 200, 917 |
| MunI | CAATTG | 1 cut(s) | 1766 |
| Mva1269I | GAATGC | 1 cut(s) | 1026 |
| MvaI | CCWGG | 2 cut(s) | 200, 917 |
| MvnI | CGCG | 1 cut(s) | 303 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 101, 485, 642, 1439, 1652 |
| NcoI | CCATGG | 1 cut(s) | 245 |
| NdeI | CATATG | 5 cut(s) | 516, 583, 1111, 1648, 1789 |
| NdeII | GATC | 7 cut(s) | 711, 1005, 1598, 1797, 1912, 2011, 2200 |
| NlaIV | GGNNCC | 3 cut(s) | 926, 1369, 1824 |
| NmeAIII | GCCGAG | 3 cut(s) | 121, 671, 1316 |
| NmuCI | GTSAC | 5 cut(s) | 824, 974, 1090, 1250, 2188 |
| NruI | TCGCGA | 1 cut(s) | 303 |
| NsiI | ATGCAT | 4 cut(s) | 454, 470, 1648, 1780 |
| NspI | RCATGY | 4 cut(s) | 370, 1157, 1381, 1579 |
| OliI | CACNNNNGTG | 1 cut(s) | 2184 |
| PaeI | GCATGC | 1 cut(s) | 1381 |
| PciI | ACATGT | 2 cut(s) | 366, 1575 |
| PctI | GAATGC | 1 cut(s) | 1026 |
| PfeI | GAWTC | 5 cut(s) | 134, 218, 736, 1520, 2078 |
| PfoI | TCCNGGA | 1 cut(s) | 198 |
| PkrI | GCNGC | 6 cut(s) | 147, 287, 985, 1420, 1654, 2242 |
| PleI | GAGTC | 3 cut(s) | 725, 943, 2092 |
| PpsI | GAGTC | 3 cut(s) | 725, 943, 2092 |
| Ppu21I | YACGTR | 1 cut(s) | 902 |
| PpuMI | RGGWCCY | 1 cut(s) | 952 |
| PscI | ACATGT | 2 cut(s) | 366, 1575 |
| PsiI | TTATAA | 1 cut(s) | 1838 |
| Psp124BI | GAGCTC | 1 cut(s) | 747 |
| Psp5II | RGGWCCY | 1 cut(s) | 952 |
| Psp6I | CCWGG | 2 cut(s) | 198, 915 |
| PspGI | CCWGG | 2 cut(s) | 198, 915 |
| PspN4I | GGNNCC | 3 cut(s) | 926, 1369, 1824 |
| PspPI | GGNCC | 2 cut(s) | 587, 952 |
| PspPPI | RGGWCCY | 1 cut(s) | 952 |
| PstNI | CAGNNNCTG | 1 cut(s) | 978 |
| PsuI | RGATCY | 1 cut(s) | 2200 |
| PvuII | CAGCTG | 1 cut(s) | 1418 |
| RruI | TCGCGA | 1 cut(s) | 303 |
| RsaI | GTAC | 4 cut(s) | 184, 1427, 1686, 2023 |
| RsaNI | GTAC | 4 cut(s) | 183, 1426, 1685, 2022 |
| RseI | CAYNNNNRTG | 4 cut(s) | 617, 1574, 2158, 2184 |
| SacI | GAGCTC | 1 cut(s) | 747 |
| SalI | GTCGAC | 1 cut(s) | 362 |
| SatI | GCNGC | 6 cut(s) | 146, 286, 984, 1419, 1653, 2241 |
| Sau3AI | GATC | 7 cut(s) | 711, 1005, 1598, 1797, 1912, 2011, 2200 |
| Sau96I | GGNCC | 2 cut(s) | 587, 952 |
| SchI | GAGTC | 3 cut(s) | 726, 944, 2093 |
| ScrFI | CCNGG | 2 cut(s) | 200, 917 |
| SduI | GDGCHC | 2 cut(s) | 747, 1854 |
| SfaNI | GCATC | 6 cut(s) | 202, 264, 455, 1763, 1765, 1802 |
| SfcI | CTRYAG | 2 cut(s) | 1009, 1372 |
| SinI | GGWCC | 2 cut(s) | 587, 952 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 617, 1574, 2158, 2184 |
| SmlI | CTYRAG | 7 cut(s) | 1085, 1145, 1163, 1898, 1939, 1997, 2263 |
| SmoI | CTYRAG | 7 cut(s) | 1085, 1145, 1163, 1898, 1939, 1997, 2263 |
| SphI | GCATGC | 1 cut(s) | 1381 |
| SsiI | CCGC | 7 cut(s) | 72, 177, 286, 566, 1040, 1137, 2241 |
| SspMI | CTAG | 6 cut(s) | 141, 383, 480, 1236, 2039, 2108 |
| SstI | GAGCTC | 1 cut(s) | 747 |
| StyD4I | CCNGG | 2 cut(s) | 198, 915 |
| StyI | CCWWGG | 1 cut(s) | 245 |
| TaaI | ACNGT | 4 cut(s) | 174, 980, 1133, 1665 |
| TaiI | ACGT | 1 cut(s) | 904 |
| TaqI | TCGA | 7 cut(s) | 137, 207, 363, 609, 1205, 1848, 2166 |
| TatI | WGTACW | 2 cut(s) | 1425, 2021 |
| TauI | GCSGC | 2 cut(s) | 288, 2243 |
| TfiI | GAWTC | 5 cut(s) | 134, 218, 736, 1520, 2078 |
| TscAI | CASTG | 3 cut(s) | 979, 1287, 2197 |
| TseFI | GTSAC | 5 cut(s) | 824, 974, 1090, 1250, 2188 |
| TseI | GCWGC | 4 cut(s) | 145, 983, 1418, 1652 |
| Tsp45I | GTSAC | 5 cut(s) | 824, 974, 1090, 1250, 2188 |
| TspGWI | ACGGA | 2 cut(s) | 335, 579 |
| TspRI | CASTG | 3 cut(s) | 979, 1287, 2197 |
| Vha464I | CTTAAG | 2 cut(s) | 1145, 2263 |
| VpaK11BI | GGWCC | 2 cut(s) | 587, 952 |
| XapI | RAATTY | 9 cut(s) | 113, 534, 962, 1033, 1061, 1272, 1402, 1605, 1701 |
| XbaI | TCTAGA | 1 cut(s) | 2038 |
| XceI | RCATGY | 4 cut(s) | 370, 1157, 1381, 1579 |
| XmiI | GTMKAC | 2 cut(s) | 363, 2087 |
| XspI | CTAG | 6 cut(s) | 141, 383, 480, 1236, 2039, 2108 |
| Zsp2I | ATGCAT | 4 cut(s) | 454, 470, 1648, 1780 |