Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0000531

Physical Location & Seq

Genomic Coordinates Reverse (-)

17207433 .. 17216399

Gene Structure 8967 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g16030.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

ATGTTTTTGATTTTTATACAAAATTTAATTAAATTTTTAAGAAAACAGGGGAGGACCTATGTAATTAAATACCCAGTATGCAGCGAGGGAGTGAGAGAGAGAGAGAGAGGGAAATTAATCAGAAGTCAGATGCCAGCCTCCTCCAACGCCAAGAGCTTAAGCTCTATTTTCCGCGGCGCCATCAAATCCAAACCCCCCTCCATACCTCTGTCCTCCCCCGCCGAGGACGCCACCCTCAAGCACTTCGTCTCCACCCTTGACCCCATTTCTCAGCGCTTCACCGCCTCCAACAAGCCACCCTCCGACCTCAACGCTCCTTCTGCGCTCGCCGCCTTGAATTTGGACTCGCCCTCCTCTCCCGAAGATTCGCCGAACGGACTGCCTCAGGATATATTTTCGATATTAGACGGCGGTACTTCTGCAAATTCTCTTGATATCCAGGGAGAAGAAGGTGAGACATTTAAGGAAAATACATTGCTCTTACCATTTTATCCTGAGGTATCTCATGGTGCAATATCATTACGTCGCAAAGAAGTCACTCGTGAAAGGAAGCAAAAGTGGACTTTCAGTAGCGGTCAGGTTAATCGTTTTGGTCGTTTAGTTGACATGTGTGCCAACAAGCTAGGGACACACACCACTCTTCAGGTTTTTGGTAAATTGGGACGAGAAACTGGCGTGAAAGAATATAATTCATTGATTAAAATTTGCATAGAGACGGCTAGGAGTAGTACAGATGAAGATGTTGGAGTAGAACAGTTTCACATGGCTTATCGAATTTTTAAAGCAATGAAGGAACAGGGTTTTCCGCTGGAGGAAGAAACGTATGGCCAATTACTTGCATATCTAATTGACATGTGTATGATAAAGGAATTTCAATATTTCTGTGGAGTTATCAAAGCTGGAAACCCTAGTTCAGTTGGCAGATTAGGATACTACGAGATGCTGTTATGGATCAGTGTCGACGATGAGGAAAAAATTCAAGAGCTCTCTAATTACATTGTAAGTGATGATGCAGGAAAGGAGTCCAATTTACAAGAGAATTATCTTTTGGCACTTTGTGAAAGTGACCGGACAAAGGAGATTTTGCAGCTGTTGGAAAGGATGGACGTAACCAAAATCTCATCTCTGCCTTTTGTGGATAGTATCTTTAGATGCTTAGGAAGGCAACTACTGGATTCCTTCGCAGAGAAGTTTCTTCTGGAATTTAAAGCCTGTGACTCTGCTGCAGAGAAGATTACAAGCTTCATCTACAGTTATGTTGTTGGCATTCCAAATTTAGCGGTTGAGGATGTCATTTCAGAATTCAAAAAATGGCACAAGAAATTGGAGGTGACACCTTCCTCTGCGTCATATGAGAAGCTTATCATGTACTGTTGTGATTCACTTAAGGTGCATGTTGCTCTTGAACTGGTTAATGAGATGTGTGAACTGGGGTTGACCTTTTCGATTGAGGCAGTACACCCCATTTTACGTGCTAGTGACGAGAGCTGTGATTTTAATTTGGTGCACAAAATCTATTCATTGATTTACCAGTACAAATTAGAGCCAAACTGTGAAACTTTCAGGTGTATGATAAGTTTGTACGTGAAAATGAAGGATTATGAAGGTGCTTATAGCATGCTGAGAGACGTGGAGGAAATGAATTTGACACCCACTGCTAACATGTACAATGCTATAATGGGCGGATTTTTCCGAGAGAAGAACATTTATGGTGGGTTGAGGGTTCTCCAACAAATGAAAGCAGCAAATGTCAAACCAGATTCCCAGACATTCAGCTATCTAATTACCTACTGTAACTCTGAGAAGGATATTAACAAGTATTATGAAGAAATGAAGCAGTCTGGAATTCAATTTACCAAGCAAATTTTCATGGCACTAATACATGCATACGCAGCTTGTGGGCAGTTTGAAAACGCCAAACAGCACTCTCAATCTGATGAAGAATTCAGCAAATTATTCTCTCTACTTGATGAATTAGATGATCCAGACTATTGGCTTGAGGGTTGCGTGAGAACTATCTTACATTGTGTTCGGAACAAGCATTTAAGATCTGCCGTCAATTTGATCAAGCAGTTCAGGGATAAAATCTGTACTGACGAATTAGCTCTAGATGTAATTTTTGATCAGGTATTTTCCTTAATTGCAGAATTAGAGCCGACATATTTGCAGTTGGGATTGGACTTGCTTCATGCTATGAAGAATGAGCTTGGCATCACACCTTCACGAAAATGTCTTGATTTTCTTCTCCACGCTTGTGGTAATGCCAAAGATCTGAAAAATGCTCGACTAATTTGGAAAGAATACGAAGCTACTGGCCTGCCTTACAACACTTTAAGTTTTTTAAGGATGTATCAAGCCCTTTTGGCTGGAGGGGACCTCAAGGCTGCGAGAACTTTGCGTTTTAAAATGCCTAAAGATGATCCTCATGTTCGCTATATCATTCAAGCATGTAAAACCGCATACTCAGAACCGAAGAGTAGAAAGAAAAAGAAGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3 PPR_long

Protein Analysis

833

Amino Acids

94.71

Weight (kDa)

6.37

Isoelectric Point (pI)

44.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000531)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04790 AT4G04790 AT4G04790 AT4G21880 AT4G21880
fragaria_vesca	FvH4_3g21820 FvH4_3g21820 FvH4_3g21820 FvH4_3g21820 FvH4_3g21820 FvH4_3g22610 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040 FvH4_7g08040
malus_domestica	MD03G1211600.v1.1
prunus_persica	Prupe.4G202300_v2.0.a1 Prupe.4G202300_v2.0.a1 Prupe.4G202300_v2.0.a1 Prupe.4G202300_v2.0.a1 Prupe.4G202300_v2.0.a1
pyrus_communis	pycom03g16030
rosa_chinensis	RchiOBHm_Chr4g0410111 RchiOBHm_Chr5g0037541 RchiOBHm_Chr5g0037561
rosa_laevigata	RLG00000008455 RLG00000008458 RLG00000008461 RLG00000008464 RLG00000008467 RLG00000008471 RLG00000008474 RLG00000008477 RLG00000008480 RLG00000008483 RLG00000008486 RLG00000008489 RLG00000033787
rosa_multiflora	Rmu_co8203932.1_g000001 Rmu_sc0000365.1_g000042 Rmu_sc0000365.1_g000043 Rmu_sc0002521.1_g000032
rosa_roxburghii	Rroxscaffold_1G00043480 Rroxscaffold_1G00043550 Rroxscaffold_5G00354910 Rroxscaffold_5G00354940
rosa_rugosa	Rorug05G0165400
rosa_samantha	Rh4AG159300 Rh4AG159500 Rh4CG170700 Rh4CG170900 Rh4DG154300 Rh5AG254800 Rh5BG256500 Rh5CG290100 Rh5DG264900
rosa_wichuraiana	Rw4G013230 Rw4G013270 Rw5G023590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	176
AccI	GTMKAC	1 cut(s)	960
AccII	CGCG	1 cut(s)	174
AclWI	GGATC	3 cut(s)	959, 1976, 2414
AcoI	YGGCCR	1 cut(s)	826
AcuI	CTGAAG	1 cut(s)	626
AcyI	GRCGYC	2 cut(s)	177, 228
AdeI	CACNNNGTG	1 cut(s)	1058
AfaI	GTAC	8 cut(s)	415, 730, 1370, 1458, 1535, 1583, 1667, 2092
AfeI	AGCGCT	1 cut(s)	275
AfiI	CCNNNNNNNGG	2 cut(s)	223, 1075
AflII	CTTAAG	2 cut(s)	157, 1385
AflIII	ACRYGT	3 cut(s)	606, 852, 1662
AgsI	TTSAA	8 cut(s)	337, 875, 980, 1306, 1406, 1850, 1910, 2444
AjiI	CACGTC	1 cut(s)	1630
AjnI	CCWGG	1 cut(s)	438
AjuI	GAANNNNNNNTTGG	4 cut(s)	1031, 1063, 1850, 1882
AleI	CACNNNNGTG	1 cut(s)	2253
Alw21I	GWGCWC	2 cut(s)	987, 1509
Alw26I	GTCTC	4 cut(s)	253, 449, 707, 1620
Alw44I	GTGCAC	1 cut(s)	1505
AlwI	GGATC	3 cut(s)	959, 1976, 2414
Aor51HI	AGCGCT	1 cut(s)	275
AoxI	GGCC	2 cut(s)	826, 2314
ApaLI	GTGCAC	1 cut(s)	1505
ApeKI	GCWGC	6 cut(s)	81, 1087, 1223, 1742, 1892, 2384
AseI	ATTAAT	1 cut(s)	116
Asp700I	GAANNNNTTC	2 cut(s)	756, 975
AspLEI	GCGC	3 cut(s)	179, 276, 325
AspS9I	GGNCC	2 cut(s)	54, 2374
AsuHPI	GGTGA	3 cut(s)	271, 464, 1342
AvaII	GGWCC	2 cut(s)	54, 2374
AxyI	CCTNAGG	2 cut(s)	384, 495
BaeGI	GKGCMC	1 cut(s)	1509
BalI	TGGCCA	1 cut(s)	828
BanI	GGYRCC	1 cut(s)	176
BanII	GRGCYC	1 cut(s)	987
BauI	CACGAG	1 cut(s)	540
Bbv12I	GWGCWC	2 cut(s)	987, 1509
BbvI	GCAGC	6 cut(s)	93, 1099, 1210, 1754, 1904, 2371
BccI	CCATC	2 cut(s)	188, 1096
BceAI	ACGGC	3 cut(s)	424, 732, 2039
BcgI	CGANNNNNNTGC	6 cut(s)	361, 395, 2146, 2180, 2377, 2411
BciT130I	CCWGG	1 cut(s)	440
BciVI	GTATCC	1 cut(s)	923
BclI	TGATCA	2 cut(s)	2064, 2122
BcoDI	GTCTC	4 cut(s)	253, 449, 707, 1620
BfaI	CTAG	5 cut(s)	623, 720, 909, 1476, 2108
BfmI	CTRYAG	2 cut(s)	1224, 1249
BfoI	RGCGCY	2 cut(s)	180, 277
BfrI	CTTAAG	2 cut(s)	157, 1385
BfuI	GTATCC	1 cut(s)	923
BglI	GCCNNNNNGGC	1 cut(s)	2363
BglII	AGATCT	2 cut(s)	2048, 2269
BisI	GCNGC	8 cut(s)	82, 175, 330, 1088, 1224, 1743, 1893, 2385
BlsI	GCNGC	8 cut(s)	83, 176, 331, 1089, 1225, 1744, 1894, 2386
Bme1390I	CCNGG	1 cut(s)	440
Bme18I	GGWCC	2 cut(s)	54, 2374
BmgBI	CACGTC	1 cut(s)	1630
BmgT120I	GGNCC	2 cut(s)	54, 2374
BmiI	GGNNCC	2 cut(s)	178, 2375
BmrFI	CCNGG	1 cut(s)	440
BmrI	ACTGGG	2 cut(s)	68, 1439
BmsI	GCATC	5 cut(s)	120, 930, 1000, 1142, 2220
BmuI	ACTGGG	2 cut(s)	68, 1439
BplI	GAGNNNNNCTC	2 cut(s)	2361, 2393
BpmI	CTGGAG	2 cut(s)	830, 2388
Bpu10I	CCTNAGC	1 cut(s)	1156
BpuEI	CTTGAG	3 cut(s)	221, 2018, 2363
BsaAI	YACGTR	2 cut(s)	1472, 1585
BsaHI	GRCGYC	2 cut(s)	177, 228
BsaJI	CCNNGG	3 cut(s)	172, 222, 439
BsaWI	WCCGGW	1 cut(s)	1068
BsaXI	ACNNNNNCTCC	4 cut(s)	233, 263, 335, 365
Bsc4I	CCNNNNNNNGG	2 cut(s)	223, 1075
Bse1I	ACTGG	7 cut(s)	74, 676, 1176, 1413, 1434, 1531, 2317
Bse21I	CCTNAGG	2 cut(s)	384, 495
Bse3DI	GCAATG	2 cut(s)	473, 792
BseBI	CCWGG	1 cut(s)	440
BseDI	CCNNGG	3 cut(s)	172, 222, 439
BseGI	GGATG	3 cut(s)	1107, 1294, 2352
BseLI	CCNNNNNNNGG	2 cut(s)	223, 1075
BseMI	GCAATG	2 cut(s)	473, 792
BseMII	CTCAG	6 cut(s)	284, 398, 486, 1613, 1791, 2478
BseNI	ACTGG	7 cut(s)	74, 676, 1176, 1413, 1434, 1531, 2317
BseRI	GAGGAG	2 cut(s)	130, 343
BseSI	GKGCMC	1 cut(s)	1509
BseXI	GCAGC	6 cut(s)	93, 1099, 1210, 1754, 1904, 2371
Bsh1236I	CGCG	1 cut(s)	174
BshFI	GGCC	2 cut(s)	828, 2316
BshNI	GGYRCC	1 cut(s)	176
BsiHKAI	GWGCWC	2 cut(s)	987, 1509
BsiSI	CCGG	1 cut(s)	1069
BslFI	GGGAC	3 cut(s)	640, 675, 2387
BslI	CCNNNNNNNGG	2 cut(s)	223, 1075
BsmAI	GTCTC	4 cut(s)	253, 449, 707, 1620
BsmBI	CGTCTC	3 cut(s)	253, 707, 1620
BsmFI	GGGAC	3 cut(s)	640, 675, 2387
BsmI	GAATGC	1 cut(s)	1266
BsnI	GGCC	2 cut(s)	828, 2316
Bsp1286I	GDGCHC	2 cut(s)	987, 1509
Bsp1407I	TGTACA	1 cut(s)	1665
Bsp143I	GATC	7 cut(s)	951, 1981, 2048, 2064, 2122, 2269, 2419
BspANI	GGCC	2 cut(s)	828, 2316
BspCNI	CTCAG	6 cut(s)	283, 397, 487, 1614, 1792, 2477
BspFNI	CGCG	1 cut(s)	174
BspLI	GGNNCC	2 cut(s)	178, 2375
BspMAI	CTGCAG	1 cut(s)	1228
BspPI	GGATC	3 cut(s)	959, 1976, 2414
BspT107I	GGYRCC	1 cut(s)	176
BspTI	CTTAAG	2 cut(s)	157, 1385
BsrDI	GCAATG	2 cut(s)	473, 792
BsrGI	TGTACA	1 cut(s)	1665
BsrI	ACTGG	7 cut(s)	74, 676, 1176, 1413, 1434, 1531, 2317
BssECI	CCNNGG	3 cut(s)	172, 222, 439
BssMI	GATC	7 cut(s)	951, 1981, 2048, 2064, 2122, 2269, 2419
BssNI	GRCGYC	2 cut(s)	177, 228
BssSI	CACGAG	1 cut(s)	540
Bst2BI	CACGAG	1 cut(s)	540
Bst2UI	CCWGG	1 cut(s)	440
Bst4CI	ACNGT	5 cut(s)	756, 1253, 1373, 1553, 1793
Bst6I	CTCTTC	2 cut(s)	645, 2468
BstACI	GRCGYC	2 cut(s)	177, 228
BstAFI	CTTAAG	2 cut(s)	157, 1385
BstAUI	TGTACA	1 cut(s)	1665
BstBAI	YACGTR	2 cut(s)	1472, 1585
BstC8I	GCNNGC	4 cut(s)	135, 327, 1619, 2318
BstDEI	CTNAG	7 cut(s)	270, 384, 495, 1156, 1622, 1800, 2464
BstDSI	CCRYGG	1 cut(s)	172
BstF5I	GGATG	3 cut(s)	1107, 1294, 2352
BstFNI	CGCG	1 cut(s)	174
BstH2I	RGCGCY	2 cut(s)	180, 277
BstHHI	GCGC	3 cut(s)	179, 276, 325
BstKTI	GATC	7 cut(s)	954, 1984, 2051, 2067, 2125, 2272, 2422
BstMAI	GTCTC	4 cut(s)	253, 449, 707, 1620
BstMBI	GATC	7 cut(s)	951, 1981, 2048, 2064, 2122, 2269, 2419
BstMWI	GCNNNNNNNGC	5 cut(s)	227, 320, 329, 1892, 2363
BstNI	CCWGG	1 cut(s)	440
BstNSI	RCATGY	7 cut(s)	610, 856, 1397, 1621, 1666, 1886, 2451
BstSCI	CCNGG	1 cut(s)	438
BstSFI	CTRYAG	2 cut(s)	1224, 1249
BstSLI	GKGCMC	1 cut(s)	1509
BstUI	CGCG	1 cut(s)	174
BstV1I	GCAGC	6 cut(s)	93, 1099, 1210, 1754, 1904, 2371
BstX2I	RGATCY	2 cut(s)	2048, 2269
BstXI	CCANNNNNNTGG	2 cut(s)	1992, 2255
BstYI	RGATCY	2 cut(s)	2048, 2269
Bsu36I	CCTNAGG	2 cut(s)	384, 495
BsuI	GTATCC	1 cut(s)	923
BsuRI	GGCC	2 cut(s)	828, 2316
BtgI	CCRYGG	1 cut(s)	172
BtrI	CACGTC	1 cut(s)	1630
BtsCI	GGATG	3 cut(s)	1107, 1294, 2352
BtsI	GCAGTG	1 cut(s)	1653
BtsIMutI	CAGTG	2 cut(s)	961, 1653
Cac8I	GCNNGC	4 cut(s)	135, 327, 1619, 2318
CfoI	GCGC	3 cut(s)	179, 276, 325
Cfr13I	GGNCC	2 cut(s)	54, 2374
Cfr42I	CCGCGG	1 cut(s)	175
CseI	GACGC	2 cut(s)	236, 1335
Csp6I	GTAC	8 cut(s)	414, 729, 1369, 1457, 1534, 1582, 1666, 2091
CviQI	GTAC	8 cut(s)	414, 729, 1369, 1457, 1534, 1582, 1666, 2091
DdeI	CTNAG	7 cut(s)	270, 384, 495, 1156, 1622, 1800, 2464
DinI	GGCGCC	1 cut(s)	178
DpnI	GATC	7 cut(s)	953, 1983, 2050, 2066, 2124, 2271, 2421
DpnII	GATC	7 cut(s)	951, 1981, 2048, 2064, 2122, 2269, 2419
DraI	TTTAAA	3 cut(s)	781, 1207, 2404
DraIII	CACNNNGTG	1 cut(s)	1058
EaeI	YGGCCR	1 cut(s)	826
Eam1104I	CTCTTC	2 cut(s)	645, 2468
EarI	CTCTTC	2 cut(s)	645, 2468
EciI	GGCGGA	1 cut(s)	1698
Ecl136II	GAGCTC	1 cut(s)	985
Eco24I	GRGCYC	1 cut(s)	987
Eco32I	GATATC	1 cut(s)	436
Eco47I	GGWCC	2 cut(s)	54, 2374
Eco47III	AGCGCT	1 cut(s)	275
Eco53kI	GAGCTC	1 cut(s)	985
Eco57I	CTGAAG	1 cut(s)	626
Eco81I	CCTNAGG	2 cut(s)	384, 495
EcoICRI	GAGCTC	1 cut(s)	985
EcoO109I	RGGNCCY	2 cut(s)	54, 2374
EcoRI	GAATTC	3 cut(s)	1301, 1845, 1943
EcoRII	CCWGG	1 cut(s)	438
EcoRV	GATATC	1 cut(s)	436
EcoT22I	ATGCAT	1 cut(s)	1888
EcoT38I	GRGCYC	1 cut(s)	987
EgeI	GGCGCC	1 cut(s)	178
EheI	GGCGCC	1 cut(s)	178
Esp3I	CGTCTC	3 cut(s)	253, 707, 1620
FaqI	GGGAC	3 cut(s)	640, 675, 2387
FauI	CCCGC	1 cut(s)	226
FauNDI	CATATG	1 cut(s)	1351
FbaI	TGATCA	2 cut(s)	2064, 2122
FblI	GTMKAC	1 cut(s)	960
Fnu4HI	GCNGC	8 cut(s)	82, 175, 330, 1088, 1224, 1743, 1893, 2385
FokI	GGATG	3 cut(s)	1114, 1301, 2359
FriOI	GRGCYC	1 cut(s)	987
Fsp4HI	GCNGC	8 cut(s)	82, 175, 330, 1088, 1224, 1743, 1893, 2385
FspBI	CTAG	5 cut(s)	623, 720, 909, 1476, 2108
GlaI	GCGC	3 cut(s)	178, 275, 324
GluI	GCNGC	8 cut(s)	82, 175, 330, 1088, 1224, 1743, 1893, 2385
GsuI	CTGGAG	2 cut(s)	830, 2388
HaeII	RGCGCY	2 cut(s)	180, 277
HaeIII	GGCC	2 cut(s)	828, 2316
HapII	CCGG	1 cut(s)	1069
HgaI	GACGC	2 cut(s)	236, 1335
HhaI	GCGC	3 cut(s)	179, 276, 325
Hin1I	GRCGYC	2 cut(s)	177, 228
Hin6I	GCGC	3 cut(s)	177, 274, 323
HinP1I	GCGC	3 cut(s)	177, 274, 323
HincII	GTYRAC	3 cut(s)	604, 961, 1437
HindII	GTYRAC	3 cut(s)	604, 961, 1437
HindIII	AAGCTT	2 cut(s)	1240, 1358
HinfI	GANTC	7 cut(s)	344, 365, 1022, 1175, 1217, 1379, 1760
HpaII	CCGG	1 cut(s)	1069
HphI	GGTGA	3 cut(s)	271, 464, 1342
Hpy166II	GTNNAC	7 cut(s)	561, 604, 961, 1427, 1437, 1459, 1507
Hpy8I	GTNNAC	7 cut(s)	561, 604, 961, 1427, 1437, 1459, 1507
Hpy99I	CGWCG	2 cut(s)	528, 965
HpyCH4III	ACNGT	5 cut(s)	756, 1253, 1373, 1553, 1793
HpyCH4IV	ACGT	6 cut(s)	523, 821, 1107, 1471, 1584, 1629
HpyF10VI	GCNNNNNNNGC	5 cut(s)	227, 320, 329, 1892, 2363
HpyF3I	CTNAG	7 cut(s)	270, 384, 495, 1156, 1622, 1800, 2464
HpySE526I	ACGT	6 cut(s)	523, 821, 1107, 1471, 1584, 1629
Hsp92I	GRCGYC	2 cut(s)	177, 228
HspAI	GCGC	3 cut(s)	177, 274, 323
KasI	GGCGCC	1 cut(s)	176
Ksp22I	TGATCA	2 cut(s)	2064, 2122
KspI	CCGCGG	1 cut(s)	175
Kzo9I	GATC	7 cut(s)	951, 1981, 2048, 2064, 2122, 2269, 2419
LmnI	GCTCC	1 cut(s)	319
Lsp1109I	GCAGC	6 cut(s)	93, 1099, 1210, 1754, 1904, 2371
LweI	GCATC	5 cut(s)	120, 930, 1000, 1142, 2220
MaeI	CTAG	5 cut(s)	623, 720, 909, 1476, 2108
MaeII	ACGT	6 cut(s)	523, 821, 1107, 1471, 1584, 1629
MaeIII	GTNAC	7 cut(s)	535, 1064, 1108, 1214, 1330, 1478, 1793
MalI	GATC	7 cut(s)	953, 1983, 2050, 2066, 2124, 2271, 2421
MboI	GATC	7 cut(s)	951, 1981, 2048, 2064, 2122, 2269, 2419
MflI	RGATCY	2 cut(s)	2048, 2269
MhlI	GDGCHC	2 cut(s)	987, 1509
MlsI	TGGCCA	1 cut(s)	828
MluNI	TGGCCA	1 cut(s)	828
Mly113I	GGCGCC	1 cut(s)	177
MlyI	GAGTC	3 cut(s)	338, 1031, 1211
MmeI	TCCRAC	6 cut(s)	168, 312, 327, 724, 1074, 1753
Mox20I	TGGCCA	1 cut(s)	828
Mph1103I	ATGCAT	1 cut(s)	1888
MroXI	GAANNNNTTC	2 cut(s)	756, 975
MscI	TGGCCA	1 cut(s)	828
MslI	CAYNNNNRTG	3 cut(s)	857, 2227, 2253
Msp20I	TGGCCA	1 cut(s)	828
MspA1I	CMGCKG	3 cut(s)	174, 808, 1090
MspCI	CTTAAG	2 cut(s)	157, 1385
MspI	CCGG	1 cut(s)	1069
MspR9I	CCNGG	1 cut(s)	440
Mva1269I	GAATGC	1 cut(s)	1266
MvaI	CCWGG	1 cut(s)	440
MvnI	CGCG	1 cut(s)	174
MwoI	GCNNNNNNNGC	5 cut(s)	227, 320, 329, 1892, 2363
NarI	GGCGCC	1 cut(s)	177
NdeI	CATATG	1 cut(s)	1351
NdeII	GATC	7 cut(s)	951, 1981, 2048, 2064, 2122, 2269, 2419
NlaIV	GGNNCC	2 cut(s)	178, 2375
NmeAIII	GCCGAG	1 cut(s)	247
NmuCI	GTSAC	5 cut(s)	535, 1064, 1214, 1330, 1478
NsiI	ATGCAT	1 cut(s)	1888
NspI	RCATGY	7 cut(s)	610, 856, 1397, 1621, 1666, 1886, 2451
OliI	CACNNNNGTG	1 cut(s)	2253
PacI	TTAATTAA	1 cut(s)	30
PaeI	GCATGC	1 cut(s)	1621
PciI	ACATGT	3 cut(s)	606, 852, 1662
PcsI	WCGNNNNNNNCGW	1 cut(s)	592
PctI	GAATGC	1 cut(s)	1266
PdmI	GAANNNNTTC	2 cut(s)	756, 975
PfeI	GAWTC	4 cut(s)	365, 1175, 1379, 1760
PkrI	GCNGC	8 cut(s)	83, 176, 331, 1089, 1225, 1744, 1894, 2386
PleI	GAGTC	3 cut(s)	338, 1030, 1211
PluTI	GGCGCC	1 cut(s)	180
PpsI	GAGTC	3 cut(s)	338, 1030, 1211
Ppu21I	YACGTR	2 cut(s)	1472, 1585
PpuMI	RGGWCCY	2 cut(s)	54, 2374
PscI	ACATGT	3 cut(s)	606, 852, 1662
PshBI	ATTAAT	1 cut(s)	116
Psp124BI	GAGCTC	1 cut(s)	987
Psp5II	RGGWCCY	2 cut(s)	54, 2374
Psp6I	CCWGG	1 cut(s)	438
PspGI	CCWGG	1 cut(s)	438
PspN4I	GGNNCC	2 cut(s)	178, 2375
PspPI	GGNCC	2 cut(s)	54, 2374
PspPPI	RGGWCCY	2 cut(s)	54, 2374
PstI	CTGCAG	1 cut(s)	1228
PsuI	RGATCY	2 cut(s)	2048, 2269
PvuII	CAGCTG	1 cut(s)	1090
RsaI	GTAC	8 cut(s)	415, 730, 1370, 1458, 1535, 1583, 1667, 2092
RsaNI	GTAC	8 cut(s)	414, 729, 1369, 1457, 1534, 1582, 1666, 2091
RseI	CAYNNNNRTG	3 cut(s)	857, 2227, 2253
SacI	GAGCTC	1 cut(s)	987
SacII	CCGCGG	1 cut(s)	175
SalI	GTCGAC	1 cut(s)	959
SatI	GCNGC	8 cut(s)	82, 175, 330, 1088, 1224, 1743, 1893, 2385
Sau3AI	GATC	7 cut(s)	951, 1981, 2048, 2064, 2122, 2269, 2419
Sau96I	GGNCC	2 cut(s)	54, 2374
SchI	GAGTC	3 cut(s)	338, 1031, 1211
ScrFI	CCNGG	1 cut(s)	440
SduI	GDGCHC	2 cut(s)	987, 1509
SfaNI	GCATC	5 cut(s)	120, 930, 1000, 1142, 2220
SfcI	CTRYAG	2 cut(s)	1224, 1249
SfoI	GGCGCC	1 cut(s)	178
Sfr303I	CCGCGG	1 cut(s)	175
SgrBI	CCGCGG	1 cut(s)	175
SinI	GGWCC	2 cut(s)	54, 2374
SmiMI	CAYNNNNRTG	3 cut(s)	857, 2227, 2253
SmlI	CTYRAG	5 cut(s)	157, 236, 1385, 1997, 2378
SmoI	CTYRAG	5 cut(s)	157, 236, 1385, 1997, 2378
SphI	GCATGC	1 cut(s)	1621
SspDI	GGCGCC	1 cut(s)	176
SspI	AATATT	1 cut(s)	878
SspMI	CTAG	5 cut(s)	623, 720, 909, 1476, 2108
SstI	GAGCTC	1 cut(s)	987
StyD4I	CCNGG	1 cut(s)	438
TaaI	ACNGT	5 cut(s)	756, 1253, 1373, 1553, 1793
TaiI	ACGT	6 cut(s)	526, 824, 1110, 1474, 1587, 1632
TaqI	TCGA	5 cut(s)	398, 772, 960, 1445, 2284
TatI	WGTACW	6 cut(s)	728, 1368, 1456, 1533, 1665, 2090
TauI	GCSGC	2 cut(s)	177, 332
TfiI	GAWTC	4 cut(s)	365, 1175, 1379, 1760
TscAI	CASTG	2 cut(s)	961, 1660
TseFI	GTSAC	5 cut(s)	535, 1064, 1214, 1330, 1478
TseI	GCWGC	6 cut(s)	81, 1087, 1223, 1742, 1892, 2384
Tsp45I	GTSAC	5 cut(s)	535, 1064, 1214, 1330, 1478
TspGWI	ACGGA	1 cut(s)	390
TspRI	CASTG	2 cut(s)	961, 1660
Vha464I	CTTAAG	2 cut(s)	157, 1385
VneI	GTGCAC	1 cut(s)	1505
VpaK11BI	GGWCC	2 cut(s)	54, 2374
VspI	ATTAAT	1 cut(s)	116
XbaI	TCTAGA	1 cut(s)	2107
XceI	RCATGY	7 cut(s)	610, 856, 1397, 1621, 1666, 1886, 2451
XmiI	GTMKAC	1 cut(s)	960
XmnI	GAANNNNTTC	2 cut(s)	756, 975
XspI	CTAG	5 cut(s)	623, 720, 909, 1476, 2108
Zsp2I	ATGCAT	1 cut(s)	1888

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.