Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1097, 1613, 1811 |
| AarI | CACCTGC | 1 cut(s) | 484 |
| Acc36I | ACCTGC | 3 cut(s) | 301, 484, 1444 |
| AccB1I | GGYRCC | 1 cut(s) | 1340 |
| AciI | CCGC | 9 cut(s) | 69, 72, 75, 78, 81, 120, 539, 618, 1013 |
| AclWI | GGATC | 6 cut(s) | 424, 692, 1880, 1893, 1992, 2315 |
| AcsI | RAATTY | 8 cut(s) | 507, 602, 935, 1006, 1034, 1282, 1578, 2307 |
| AcuI | CTGAAG | 2 cut(s) | 384, 1554 |
| AcvI | CACGTG | 1 cut(s) | 379 |
| AdeI | CACNNNGTG | 1 cut(s) | 791 |
| AfaI | GTAC | 2 cut(s) | 1400, 1659 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 808 |
| AflII | CTTAAG | 2 cut(s) | 1912, 2233 |
| AflIII | ACRYGT | 2 cut(s) | 378, 1548 |
| AjnI | CCWGG | 3 cut(s) | 186, 888, 1678 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1583, 1615 |
| AleI | CACNNNNGTG | 1 cut(s) | 2154 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 519, 551 |
| Alw21I | GWGCWC | 1 cut(s) | 1827 |
| Alw26I | GTCTC | 4 cut(s) | 95, 219, 1868, 2138 |
| AlwI | GGATC | 6 cut(s) | 424, 692, 1880, 1893, 1992, 2315 |
| AoxI | GGCC | 5 cut(s) | 1277, 2074, 2110, 2215, 2265 |
| ApeKI | GCWGC | 9 cut(s) | 139, 253, 820, 956, 1354, 1450, 1625, 1908, 2285 |
| ApoI | RAATTY | 8 cut(s) | 507, 602, 935, 1006, 1034, 1282, 1578, 2307 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1162, 1194 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 708 |
| AspS9I | GGNCC | 2 cut(s) | 560, 925 |
| AsuC2I | CCSGG | 1 cut(s) | 10 |
| AsuHPI | GGTGA | 4 cut(s) | 849, 1075, 1232, 2107 |
| AvaII | GGWCC | 2 cut(s) | 560, 925 |
| AxyI | CCTNAGG | 1 cut(s) | 1274 |
| BamHI | GGATCC | 1 cut(s) | 1885 |
| BanI | GGYRCC | 1 cut(s) | 1340 |
| BauI | CACGAG | 1 cut(s) | 273 |
| BbrPI | CACGTG | 1 cut(s) | 379 |
| Bbv12I | GWGCWC | 1 cut(s) | 1827 |
| BbvI | GCAGC | 9 cut(s) | 151, 265, 832, 968, 1341, 1437, 1637, 1895, 2272 |
| BccI | CCATC | 5 cut(s) | 50, 737, 944, 1518, 1898 |
| BceAI | ACGGC | 1 cut(s) | 1943 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 299, 333 |
| BciT130I | CCWGG | 3 cut(s) | 188, 890, 1680 |
| BciVI | GTATCC | 1 cut(s) | 656 |
| BcnI | CCSGG | 1 cut(s) | 10 |
| BcoDI | GTCTC | 4 cut(s) | 95, 219, 1868, 2138 |
| BfaI | CTAG | 4 cut(s) | 453, 1209, 2012, 2078 |
| BfmI | CTRYAG | 3 cut(s) | 982, 1345, 1451 |
| BfrI | CTTAAG | 2 cut(s) | 1912, 2233 |
| BfuAI | ACCTGC | 3 cut(s) | 301, 484, 1444 |
| BfuI | GTATCC | 1 cut(s) | 656 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2264 |
| BglII | AGATCT | 1 cut(s) | 2170 |
| Bme1390I | CCNGG | 4 cut(s) | 10, 188, 890, 1680 |
| Bme18I | GGWCC | 2 cut(s) | 560, 925 |
| BmgT120I | GGNCC | 2 cut(s) | 560, 925 |
| BmiI | GGNNCC | 4 cut(s) | 899, 1342, 1797, 1887 |
| BmrFI | CCNGG | 4 cut(s) | 10, 188, 890, 1680 |
| BmrI | ACTGGG | 2 cut(s) | 144, 1172 |
| BmsI | GCATC | 4 cut(s) | 190, 466, 1736, 1775 |
| BmuI | ACTGGG | 2 cut(s) | 144, 1172 |
| BpmI | CTGGAG | 1 cut(s) | 170 |
| BpuEI | CTTGAG | 4 cut(s) | 1079, 1157, 1892, 1991 |
| BpuMI | CCSGG | 1 cut(s) | 10 |
| BsaAI | YACGTR | 2 cut(s) | 379, 875 |
| BsaJI | CCNNGG | 4 cut(s) | 19, 233, 889, 1444 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 41, 71 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 808 |
| Bse1I | ACTGG | 4 cut(s) | 139, 409, 1167, 2218 |
| Bse21I | CCTNAGG | 1 cut(s) | 1274 |
| Bse3DI | GCAATG | 2 cut(s) | 248, 1187 |
| BseBI | CCWGG | 3 cut(s) | 188, 890, 1680 |
| BseDI | CCNNGG | 4 cut(s) | 19, 233, 889, 1444 |
| BseGI | GGATG | 4 cut(s) | 1027, 1153, 1790, 2253 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 808 |
| BseMI | GCAATG | 2 cut(s) | 248, 1187 |
| BseMII | CTCAG | 1 cut(s) | 1265 |
| BseNI | ACTGG | 4 cut(s) | 139, 409, 1167, 2218 |
| BseRI | GAGGAG | 3 cut(s) | 49, 52, 55 |
| BseXI | GCAGC | 9 cut(s) | 151, 265, 832, 968, 1341, 1437, 1637, 1895, 2272 |
| BsgI | GTGCAG | 3 cut(s) | 839, 975, 1978 |
| BshFI | GGCC | 5 cut(s) | 1279, 2076, 2112, 2217, 2267 |
| BshNI | GGYRCC | 1 cut(s) | 1340 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1827 |
| BsiSI | CCGG | 1 cut(s) | 10 |
| BslFI | GGGAC | 3 cut(s) | 373, 1426, 2288 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 808 |
| BsmAI | GTCTC | 4 cut(s) | 95, 219, 1868, 2138 |
| BsmFI | GGGAC | 3 cut(s) | 373, 1426, 2288 |
| BsmI | GAATGC | 1 cut(s) | 999 |
| BsnI | GGCC | 5 cut(s) | 1279, 2076, 2112, 2217, 2267 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1827 |
| Bsp1407I | TGTACA | 1 cut(s) | 1398 |
| Bsp143I | GATC | 9 cut(s) | 181, 416, 684, 978, 1770, 1885, 1984, 2170, 2320 |
| BspACI | CCGC | 9 cut(s) | 69, 72, 75, 78, 81, 120, 539, 618, 1013 |
| BspANI | GGCC | 5 cut(s) | 1279, 2076, 2112, 2217, 2267 |
| BspCNI | CTCAG | 1 cut(s) | 1266 |
| BspHI | TCATGA | 1 cut(s) | 697 |
| BspLI | GGNNCC | 4 cut(s) | 899, 1342, 1797, 1887 |
| BspMAI | CTGCAG | 1 cut(s) | 1455 |
| BspMI | ACCTGC | 3 cut(s) | 301, 484, 1444 |
| BspPI | GGATC | 6 cut(s) | 424, 692, 1880, 1893, 1992, 2315 |
| BspT107I | GGYRCC | 1 cut(s) | 1340 |
| BspTI | CTTAAG | 2 cut(s) | 1912, 2233 |
| BsrDI | GCAATG | 2 cut(s) | 248, 1187 |
| BsrGI | TGTACA | 1 cut(s) | 1398 |
| BsrI | ACTGG | 4 cut(s) | 139, 409, 1167, 2218 |
| BssECI | CCNNGG | 4 cut(s) | 19, 233, 889, 1444 |
| BssMI | GATC | 9 cut(s) | 181, 416, 684, 978, 1770, 1885, 1984, 2170, 2320 |
| BssSI | CACGAG | 1 cut(s) | 273 |
| Bst2BI | CACGAG | 1 cut(s) | 273 |
| Bst2UI | CCWGG | 3 cut(s) | 188, 890, 1680 |
| Bst6I | CTCTTC | 5 cut(s) | 278, 378, 540, 1530, 2093 |
| BstAFI | CTTAAG | 2 cut(s) | 1912, 2233 |
| BstAUI | TGTACA | 1 cut(s) | 1398 |
| BstBAI | YACGTR | 2 cut(s) | 379, 875 |
| BstC8I | GCNNGC | 3 cut(s) | 1352, 1709, 2219 |
| BstDEI | CTNAG | 2 cut(s) | 1274, 1663 |
| BstDSI | CCRYGG | 2 cut(s) | 233, 1444 |
| BstEII | GGTNACC | 1 cut(s) | 635 |
| BstF5I | GGATG | 4 cut(s) | 1027, 1153, 1790, 2253 |
| BstKTI | GATC | 9 cut(s) | 184, 419, 687, 981, 1773, 1888, 1987, 2173, 2323 |
| BstMAI | GTCTC | 4 cut(s) | 95, 219, 1868, 2138 |
| BstMBI | GATC | 9 cut(s) | 181, 416, 684, 978, 1770, 1885, 1984, 2170, 2320 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 77, 80, 458, 615, 1625, 2264 |
| BstNI | CCWGG | 3 cut(s) | 188, 890, 1680 |
| BstNSI | RCATGY | 6 cut(s) | 948, 1130, 1354, 1552, 1598, 2352 |
| BstPI | GGTNACC | 1 cut(s) | 635 |
| BstSCI | CCNGG | 4 cut(s) | 8, 186, 888, 1678 |
| BstSFI | CTRYAG | 3 cut(s) | 982, 1345, 1451 |
| BstV1I | GCAGC | 9 cut(s) | 151, 265, 832, 968, 1341, 1437, 1637, 1895, 2272 |
| BstX2I | RGATCY | 3 cut(s) | 416, 1885, 2170 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1896 |
| BstYI | RGATCY | 3 cut(s) | 416, 1885, 2170 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1274 |
| BsuI | GTATCC | 1 cut(s) | 656 |
| BsuRI | GGCC | 5 cut(s) | 1279, 2076, 2112, 2217, 2267 |
| BtgI | CCRYGG | 2 cut(s) | 233, 1444 |
| BtgZI | GCGATG | 1 cut(s) | 2029 |
| BtsCI | GGATG | 4 cut(s) | 1027, 1153, 1790, 2253 |
| BtsI | GCAGTG | 1 cut(s) | 171 |
| BtsIMutI | CAGTG | 6 cut(s) | 24, 171, 785, 1260, 1995, 2211 |
| BveI | ACCTGC | 3 cut(s) | 301, 484, 1444 |
| Cac8I | GCNNGC | 3 cut(s) | 1352, 1709, 2219 |
| CciI | TCATGA | 1 cut(s) | 697 |
| Cfr13I | GGNCC | 2 cut(s) | 560, 925 |
| Csp6I | GTAC | 2 cut(s) | 1399, 1658 |
| CviQI | GTAC | 2 cut(s) | 1399, 1658 |
| DdeI | CTNAG | 2 cut(s) | 1274, 1663 |
| DpnI | GATC | 9 cut(s) | 183, 418, 686, 980, 1772, 1887, 1986, 2172, 2322 |
| DpnII | GATC | 9 cut(s) | 181, 416, 684, 978, 1770, 1885, 1984, 2170, 2320 |
| DraI | TTTAAA | 3 cut(s) | 883, 940, 2367 |
| DraIII | CACNNNGTG | 1 cut(s) | 791 |
| Eam1104I | CTCTTC | 5 cut(s) | 278, 378, 540, 1530, 2093 |
| EarI | CTCTTC | 5 cut(s) | 278, 378, 540, 1530, 2093 |
| EciI | GGCGGA | 1 cut(s) | 58 |
| Eco47I | GGWCC | 2 cut(s) | 560, 925 |
| Eco57I | CTGAAG | 2 cut(s) | 384, 1554 |
| Eco72I | CACGTG | 1 cut(s) | 379 |
| Eco81I | CCTNAGG | 1 cut(s) | 1274 |
| Eco91I | GGTNACC | 1 cut(s) | 635 |
| EcoO109I | RGGNCCY | 1 cut(s) | 925 |
| EcoO65I | GGTNACC | 1 cut(s) | 635 |
| EcoRI | GAATTC | 1 cut(s) | 1578 |
| EcoRII | CCWGG | 3 cut(s) | 186, 888, 1678 |
| EcoT22I | ATGCAT | 3 cut(s) | 427, 1621, 1753 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 357, 389 |
| FaqI | GGGAC | 3 cut(s) | 373, 1426, 2288 |
| FauI | CCCGC | 3 cut(s) | 127, 546, 611 |
| FauNDI | CATATG | 4 cut(s) | 489, 556, 1084, 1621 |
| FokI | GGATG | 4 cut(s) | 1034, 1160, 1797, 2260 |
| FspBI | CTAG | 4 cut(s) | 453, 1209, 2012, 2078 |
| GsuI | CTGGAG | 1 cut(s) | 170 |
| HaeIII | GGCC | 5 cut(s) | 1279, 2076, 2112, 2217, 2267 |
| HapII | CCGG | 1 cut(s) | 10 |
| HindIII | AAGCTT | 1 cut(s) | 1091 |
| HpaII | CCGG | 1 cut(s) | 10 |
| HphI | GGTGA | 4 cut(s) | 849, 1075, 1232, 2107 |
| Hpy166II | GTNNAC | 5 cut(s) | 751, 1240, 1634, 2354, 2420 |
| Hpy188I | TCNGA | 9 cut(s) | 127, 181, 506, 689, 1288, 1427, 1534, 1837, 2056 |
| Hpy8I | GTNNAC | 5 cut(s) | 751, 1240, 1634, 2354, 2420 |
| Hpy99I | CGWCG | 1 cut(s) | 98 |
| HpyCH4IV | ACGT | 2 cut(s) | 378, 874 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 77, 80, 458, 615, 1625, 2264 |
| HpyF3I | CTNAG | 2 cut(s) | 1274, 1663 |
| HpySE526I | ACGT | 2 cut(s) | 378, 874 |
| Kzo9I | GATC | 9 cut(s) | 181, 416, 684, 978, 1770, 1885, 1984, 2170, 2320 |
| LmnI | GCTCC | 2 cut(s) | 903, 1795 |
| Lsp1109I | GCAGC | 9 cut(s) | 151, 265, 832, 968, 1341, 1437, 1637, 1895, 2272 |
| LweI | GCATC | 4 cut(s) | 190, 466, 1736, 1775 |
| MaeI | CTAG | 4 cut(s) | 453, 1209, 2012, 2078 |
| MaeII | ACGT | 2 cut(s) | 378, 874 |
| MaeIII | GTNAC | 6 cut(s) | 28, 635, 756, 797, 1063, 1223 |
| MalI | GATC | 9 cut(s) | 183, 418, 686, 980, 1772, 1887, 1986, 2172, 2322 |
| MboI | GATC | 9 cut(s) | 181, 416, 684, 978, 1770, 1885, 1984, 2170, 2320 |
| MfeI | CAATTG | 1 cut(s) | 1739 |
| MflI | RGATCY | 3 cut(s) | 416, 1885, 2170 |
| MhlI | GDGCHC | 1 cut(s) | 1827 |
| MlyI | GAGTC | 3 cut(s) | 699, 917, 2066 |
| MmeI | TCCRAC | 2 cut(s) | 192, 1396 |
| Mph1103I | ATGCAT | 3 cut(s) | 427, 1621, 1753 |
| MroXI | GAANNNNTTC | 1 cut(s) | 708 |
| MslI | CAYNNNNRTG | 4 cut(s) | 590, 1547, 2128, 2154 |
| MspA1I | CMGCKG | 1 cut(s) | 823 |
| MspCI | CTTAAG | 2 cut(s) | 1912, 2233 |
| MspI | CCGG | 1 cut(s) | 10 |
| MspR9I | CCNGG | 4 cut(s) | 10, 188, 890, 1680 |
| MunI | CAATTG | 1 cut(s) | 1739 |
| Mva1269I | GAATGC | 1 cut(s) | 999 |
| MvaI | CCWGG | 3 cut(s) | 188, 890, 1680 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 77, 80, 458, 615, 1625, 2264 |
| NciI | CCSGG | 1 cut(s) | 10 |
| NdeI | CATATG | 4 cut(s) | 489, 556, 1084, 1621 |
| NdeII | GATC | 9 cut(s) | 181, 416, 684, 978, 1770, 1885, 1984, 2170, 2320 |
| NlaIV | GGNNCC | 4 cut(s) | 899, 1342, 1797, 1887 |
| NmuCI | GTSAC | 5 cut(s) | 28, 756, 797, 1063, 1223 |
| NsiI | ATGCAT | 3 cut(s) | 427, 1621, 1753 |
| NspI | RCATGY | 6 cut(s) | 948, 1130, 1354, 1552, 1598, 2352 |
| OliI | CACNNNNGTG | 1 cut(s) | 2154 |
| PaeI | GCATGC | 1 cut(s) | 1354 |
| PagI | TCATGA | 1 cut(s) | 697 |
| PaqCI | CACCTGC | 1 cut(s) | 484 |
| PciI | ACATGT | 1 cut(s) | 1548 |
| PctI | GAATGC | 1 cut(s) | 999 |
| PdmI | GAANNNNTTC | 1 cut(s) | 708 |
| PfeI | GAWTC | 8 cut(s) | 89, 128, 206, 709, 1112, 1493, 1675, 2051 |
| PfoI | TCCNGGA | 2 cut(s) | 186, 1678 |
| PleI | GAGTC | 3 cut(s) | 698, 916, 2065 |
| PmaCI | CACGTG | 1 cut(s) | 379 |
| PmlI | CACGTG | 1 cut(s) | 379 |
| PpsI | GAGTC | 3 cut(s) | 698, 916, 2065 |
| Ppu21I | YACGTR | 2 cut(s) | 379, 875 |
| PpuMI | RGGWCCY | 1 cut(s) | 925 |
| PscI | ACATGT | 1 cut(s) | 1548 |
| PsiI | TTATAA | 3 cut(s) | 1097, 1613, 1811 |
| Psp5II | RGGWCCY | 1 cut(s) | 925 |
| Psp6I | CCWGG | 3 cut(s) | 186, 888, 1678 |
| PspCI | CACGTG | 1 cut(s) | 379 |
| PspEI | GGTNACC | 1 cut(s) | 635 |
| PspGI | CCWGG | 3 cut(s) | 186, 888, 1678 |
| PspN4I | GGNNCC | 4 cut(s) | 899, 1342, 1797, 1887 |
| PspPI | GGNCC | 2 cut(s) | 560, 925 |
| PspPPI | RGGWCCY | 1 cut(s) | 925 |
| PstI | CTGCAG | 1 cut(s) | 1455 |
| PsuI | RGATCY | 3 cut(s) | 416, 1885, 2170 |
| PvuII | CAGCTG | 1 cut(s) | 823 |
| RsaI | GTAC | 2 cut(s) | 1400, 1659 |
| RsaNI | GTAC | 2 cut(s) | 1399, 1658 |
| RseI | CAYNNNNRTG | 4 cut(s) | 590, 1547, 2128, 2154 |
| Sau3AI | GATC | 9 cut(s) | 181, 416, 684, 978, 1770, 1885, 1984, 2170, 2320 |
| Sau96I | GGNCC | 2 cut(s) | 560, 925 |
| SchI | GAGTC | 3 cut(s) | 699, 917, 2066 |
| ScrFI | CCNGG | 4 cut(s) | 10, 188, 890, 1680 |
| SduI | GDGCHC | 1 cut(s) | 1827 |
| SfaNI | GCATC | 4 cut(s) | 190, 466, 1736, 1775 |
| SfcI | CTRYAG | 3 cut(s) | 982, 1345, 1451 |
| SinI | GGWCC | 2 cut(s) | 560, 925 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 590, 1547, 2128, 2154 |
| SmlI | CTYRAG | 6 cut(s) | 1058, 1136, 1871, 1912, 1970, 2233 |
| SmoI | CTYRAG | 6 cut(s) | 1058, 1136, 1871, 1912, 1970, 2233 |
| SphI | GCATGC | 1 cut(s) | 1354 |
| SsiI | CCGC | 9 cut(s) | 69, 72, 75, 78, 81, 120, 539, 618, 1013 |
| SspMI | CTAG | 4 cut(s) | 453, 1209, 2012, 2078 |
| StyD4I | CCNGG | 4 cut(s) | 8, 186, 888, 1678 |
| TaiI | ACGT | 2 cut(s) | 381, 877 |
| TaqI | TCGA | 7 cut(s) | 131, 155, 336, 712, 1821, 1902, 2136 |
| TaqII | GACCGA | 1 cut(s) | 2322 |
| TatI | WGTACW | 1 cut(s) | 1398 |
| TauI | GCSGC | 4 cut(s) | 74, 77, 80, 83 |
| TfiI | GAWTC | 8 cut(s) | 89, 128, 206, 709, 1112, 1493, 1675, 2051 |
| TscAI | CASTG | 6 cut(s) | 31, 178, 792, 1260, 2002, 2218 |
| TseFI | GTSAC | 5 cut(s) | 28, 756, 797, 1063, 1223 |
| TseI | GCWGC | 9 cut(s) | 139, 253, 820, 956, 1354, 1450, 1625, 1908, 2285 |
| Tsp45I | GTSAC | 5 cut(s) | 28, 756, 797, 1063, 1223 |
| TspGWI | ACGGA | 3 cut(s) | 82, 136, 552 |
| TspRI | CASTG | 6 cut(s) | 31, 178, 792, 1260, 2002, 2218 |
| Vha464I | CTTAAG | 2 cut(s) | 1912, 2233 |
| VpaK11BI | GGWCC | 2 cut(s) | 560, 925 |
| XapI | RAATTY | 8 cut(s) | 507, 602, 935, 1006, 1034, 1282, 1578, 2307 |
| XbaI | TCTAGA | 1 cut(s) | 2011 |
| XceI | RCATGY | 6 cut(s) | 948, 1130, 1354, 1552, 1598, 2352 |
| XmnI | GAANNNNTTC | 1 cut(s) | 708 |
| XspI | CTAG | 4 cut(s) | 453, 1209, 2012, 2078 |
| Zsp2I | ATGCAT | 3 cut(s) | 427, 1621, 1753 |