Pentatricopeptide repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1556 |
| Acc36I | ACCTGC | 1 cut(s) | 1708 |
| AccB1I | GGYRCC | 1 cut(s) | 1085 |
| AccI | GTMKAC | 2 cut(s) | 369, 1805 |
| AccII | CGCG | 1 cut(s) | 309 |
| AciI | CCGC | 4 cut(s) | 78, 292, 572, 1959 |
| AclWI | GGATC | 3 cut(s) | 1625, 1737, 2063 |
| AcsI | RAATTY | 9 cut(s) | 119, 540, 788, 859, 990, 1120, 1323, 1419, 2055 |
| AcuI | CTGAAG | 1 cut(s) | 1299 |
| AcyI | GRCGYC | 2 cut(s) | 108, 1127 |
| AdeI | CACNNNGTG | 1 cut(s) | 644 |
| AfaI | GTAC | 4 cut(s) | 190, 1145, 1404, 1741 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 661 |
| AflII | CTTAAG | 1 cut(s) | 1981 |
| AflIII | ACRYGT | 2 cut(s) | 372, 1293 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1703 |
| AjnI | CCWGG | 3 cut(s) | 157, 204, 741 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1328, 1360 |
| AleI | CACNNNNGTG | 1 cut(s) | 1902 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 552, 584 |
| Alw21I | GWGCWC | 1 cut(s) | 1572 |
| Alw26I | GTCTC | 4 cut(s) | 130, 1613, 1886, 2113 |
| AlwI | GGATC | 3 cut(s) | 1625, 1737, 2063 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 804 |
| AoxI | GGCC | 1 cut(s) | 1822 |
| ApeKI | GCWGC | 6 cut(s) | 151, 809, 1136, 1370, 2015, 2033 |
| ApoI | RAATTY | 9 cut(s) | 119, 540, 788, 859, 990, 1120, 1323, 1419, 2055 |
| AspLEI | GCGC | 1 cut(s) | 291 |
| AspS9I | GGNCC | 3 cut(s) | 593, 778, 2023 |
| AsuHPI | GGTGA | 5 cut(s) | 87, 702, 977, 1855, 2122 |
| AvaII | GGWCC | 3 cut(s) | 593, 778, 2023 |
| BanI | GGYRCC | 1 cut(s) | 1085 |
| Bbv12I | GWGCWC | 1 cut(s) | 1572 |
| BbvI | GCAGC | 6 cut(s) | 163, 821, 1123, 1382, 2002, 2020 |
| BccI | CCATC | 4 cut(s) | 47, 919, 1263, 1643 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 268, 302, 359, 393 |
| BciT130I | CCWGG | 3 cut(s) | 159, 206, 743 |
| BciVI | GTATCC | 1 cut(s) | 359 |
| BcoDI | GTCTC | 4 cut(s) | 130, 1613, 1886, 2113 |
| BfaI | CTAG | 6 cut(s) | 147, 389, 486, 954, 1757, 1826 |
| BfmI | CTRYAG | 4 cut(s) | 835, 1090, 1701, 2016 |
| BfrI | CTTAAG | 1 cut(s) | 1981 |
| BfuAI | ACCTGC | 1 cut(s) | 1708 |
| BfuI | GTATCC | 1 cut(s) | 359 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2012 |
| BglII | AGATCT | 1 cut(s) | 1918 |
| BisI | GCNGC | 8 cut(s) | 152, 292, 810, 1137, 1371, 1959, 2016, 2034 |
| BlsI | GCNGC | 8 cut(s) | 153, 293, 811, 1138, 1372, 1960, 2017, 2035 |
| Bme1390I | CCNGG | 3 cut(s) | 159, 206, 743 |
| Bme18I | GGWCC | 3 cut(s) | 593, 778, 2023 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1703 |
| BmgT120I | GGNCC | 3 cut(s) | 593, 778, 2023 |
| BmiI | GGNNCC | 4 cut(s) | 752, 1087, 1542, 2024 |
| BmrFI | CCNGG | 3 cut(s) | 159, 206, 743 |
| BmsI | GCATC | 7 cut(s) | 208, 270, 461, 1481, 1483, 1520, 1869 |
| BpuEI | CTTGAG | 4 cut(s) | 902, 1637, 1678, 1736 |
| Bsa29I | ATCGAT | 1 cut(s) | 213 |
| BsaAI | YACGTR | 1 cut(s) | 728 |
| BsaHI | GRCGYC | 2 cut(s) | 108, 1127 |
| BsaJI | CCNNGG | 5 cut(s) | 157, 158, 251, 742, 1009 |
| BsaWI | WCCGGW | 3 cut(s) | 654, 712, 1187 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 38, 68 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 661 |
| Bse1I | ACTGG | 2 cut(s) | 798, 1424 |
| Bse3DI | GCAATG | 3 cut(s) | 284, 932, 2096 |
| BseBI | CCWGG | 3 cut(s) | 159, 206, 743 |
| BseCI | ATCGAT | 1 cut(s) | 213 |
| BseDI | CCNNGG | 5 cut(s) | 157, 158, 251, 742, 1009 |
| BseGI | GGATG | 3 cut(s) | 898, 1535, 2001 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 661 |
| BseMI | GCAATG | 3 cut(s) | 284, 932, 2096 |
| BseMII | CTCAG | 4 cut(s) | 356, 1091, 1738, 2124 |
| BseNI | ACTGG | 2 cut(s) | 798, 1424 |
| BseRI | GAGGAG | 6 cut(s) | 46, 49, 52, 55, 58, 1598 |
| BseXI | GCAGC | 6 cut(s) | 163, 821, 1123, 1382, 2002, 2020 |
| BsgI | GTGCAG | 2 cut(s) | 202, 828 |
| Bsh1236I | CGCG | 1 cut(s) | 309 |
| BshFI | GGCC | 1 cut(s) | 1824 |
| BshNI | GGYRCC | 1 cut(s) | 1085 |
| BshVI | ATCGAT | 1 cut(s) | 213 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1572 |
| BsiSI | CCGG | 3 cut(s) | 655, 713, 1188 |
| BslFI | GGGAC | 4 cut(s) | 176, 406, 2036, 2061 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 661 |
| BsmAI | GTCTC | 4 cut(s) | 130, 1613, 1886, 2113 |
| BsmBI | CGTCTC | 1 cut(s) | 130 |
| BsmFI | GGGAC | 4 cut(s) | 176, 406, 2036, 2061 |
| BsmI | GAATGC | 2 cut(s) | 852, 2157 |
| BsnI | GGCC | 1 cut(s) | 1824 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1572 |
| Bsp1407I | TGTACA | 1 cut(s) | 1143 |
| Bsp143I | GATC | 7 cut(s) | 831, 1316, 1515, 1630, 1729, 1918, 2068 |
| Bsp19I | CCATGG | 1 cut(s) | 251 |
| Bsp68I | TCGCGA | 1 cut(s) | 309 |
| BspACI | CCGC | 4 cut(s) | 78, 292, 572, 1959 |
| BspANI | GGCC | 1 cut(s) | 1824 |
| BspCNI | CTCAG | 4 cut(s) | 355, 1092, 1737, 2123 |
| BspDI | ATCGAT | 1 cut(s) | 213 |
| BspFNI | CGCG | 1 cut(s) | 309 |
| BspLI | GGNNCC | 4 cut(s) | 752, 1087, 1542, 2024 |
| BspMAI | CTGCAG | 2 cut(s) | 1705, 2020 |
| BspMI | ACCTGC | 1 cut(s) | 1708 |
| BspPI | GGATC | 3 cut(s) | 1625, 1737, 2063 |
| BspT107I | GGYRCC | 1 cut(s) | 1085 |
| BspTI | CTTAAG | 1 cut(s) | 1981 |
| BsrDI | GCAATG | 3 cut(s) | 284, 932, 2096 |
| BsrGI | TGTACA | 1 cut(s) | 1143 |
| BsrI | ACTGG | 2 cut(s) | 798, 1424 |
| BssECI | CCNNGG | 5 cut(s) | 157, 158, 251, 742, 1009 |
| BssMI | GATC | 7 cut(s) | 831, 1316, 1515, 1630, 1729, 1918, 2068 |
| BssNI | GRCGYC | 2 cut(s) | 108, 1127 |
| BssT1I | CCWWGG | 1 cut(s) | 251 |
| Bst2UI | CCWGG | 3 cut(s) | 159, 206, 743 |
| Bst4CI | ACNGT | 3 cut(s) | 180, 806, 1383 |
| Bst6I | CTCTTC | 6 cut(s) | 76, 424, 573, 1275, 1506, 1841 |
| BstACI | GRCGYC | 2 cut(s) | 108, 1127 |
| BstAFI | CTTAAG | 1 cut(s) | 1981 |
| BstAUI | TGTACA | 1 cut(s) | 1143 |
| BstBAI | YACGTR | 1 cut(s) | 728 |
| BstC8I | GCNNGC | 4 cut(s) | 1097, 1524, 1963, 1967 |
| BstDEI | CTNAG | 6 cut(s) | 342, 679, 1100, 1408, 1724, 2110 |
| BstDSI | CCRYGG | 1 cut(s) | 251 |
| BstF5I | GGATG | 3 cut(s) | 898, 1535, 2001 |
| BstFNI | CGCG | 1 cut(s) | 309 |
| BstHHI | GCGC | 1 cut(s) | 291 |
| BstKTI | GATC | 7 cut(s) | 834, 1319, 1518, 1633, 1732, 1921, 2071 |
| BstMAI | GTCTC | 4 cut(s) | 130, 1613, 1886, 2113 |
| BstMBI | GATC | 7 cut(s) | 831, 1316, 1515, 1630, 1729, 1918, 2068 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 491, 1157, 1370, 2012 |
| BstNI | CCWGG | 3 cut(s) | 159, 206, 743 |
| BstNSI | RCATGY | 4 cut(s) | 376, 875, 1099, 1297 |
| BstSCI | CCNGG | 3 cut(s) | 157, 204, 741 |
| BstSFI | CTRYAG | 4 cut(s) | 835, 1090, 1701, 2016 |
| BstUI | CGCG | 1 cut(s) | 309 |
| BstV1I | GCAGC | 6 cut(s) | 163, 821, 1123, 1382, 2002, 2020 |
| BstX2I | RGATCY | 1 cut(s) | 1918 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1641 |
| BstYI | RGATCY | 1 cut(s) | 1918 |
| Bsu15I | ATCGAT | 1 cut(s) | 213 |
| BsuI | GTATCC | 1 cut(s) | 359 |
| BsuRI | GGCC | 1 cut(s) | 1824 |
| BsuTUI | ATCGAT | 1 cut(s) | 213 |
| BtgI | CCRYGG | 1 cut(s) | 251 |
| BtgZI | GCGATG | 1 cut(s) | 293 |
| BtsCI | GGATG | 3 cut(s) | 898, 1535, 2001 |
| BtsI | GCAGTG | 2 cut(s) | 190, 1908 |
| BtsIMutI | CAGTG | 4 cut(s) | 190, 805, 1005, 1908 |
| BtuMI | TCGCGA | 1 cut(s) | 309 |
| BveI | ACCTGC | 1 cut(s) | 1708 |
| Cac8I | GCNNGC | 4 cut(s) | 1097, 1524, 1963, 1967 |
| CaiI | CAGNNNCTG | 1 cut(s) | 804 |
| CfoI | GCGC | 1 cut(s) | 291 |
| Cfr13I | GGNCC | 3 cut(s) | 593, 778, 2023 |
| ClaI | ATCGAT | 1 cut(s) | 213 |
| CseI | GACGC | 2 cut(s) | 116, 1135 |
| Csp6I | GTAC | 4 cut(s) | 189, 1144, 1403, 1740 |
| CviQI | GTAC | 4 cut(s) | 189, 1144, 1403, 1740 |
| DdeI | CTNAG | 6 cut(s) | 342, 679, 1100, 1408, 1724, 2110 |
| DpnI | GATC | 7 cut(s) | 833, 1318, 1517, 1632, 1731, 1920, 2070 |
| DpnII | GATC | 7 cut(s) | 831, 1316, 1515, 1630, 1729, 1918, 2068 |
| DraI | TTTAAA | 2 cut(s) | 736, 793 |
| DraIII | CACNNNGTG | 1 cut(s) | 644 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1703 |
| Eam1104I | CTCTTC | 6 cut(s) | 76, 424, 573, 1275, 1506, 1841 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1703 |
| EarI | CTCTTC | 6 cut(s) | 76, 424, 573, 1275, 1506, 1841 |
| EciI | GGCGGA | 1 cut(s) | 67 |
| Eco130I | CCWWGG | 1 cut(s) | 251 |
| Eco32I | GATATC | 1 cut(s) | 202 |
| Eco47I | GGWCC | 3 cut(s) | 593, 778, 2023 |
| Eco57I | CTGAAG | 1 cut(s) | 1299 |
| EcoO109I | RGGNCCY | 1 cut(s) | 778 |
| EcoRI | GAATTC | 2 cut(s) | 1323, 1419 |
| EcoRII | CCWGG | 3 cut(s) | 157, 204, 741 |
| EcoRV | GATATC | 1 cut(s) | 202 |
| EcoT14I | CCWWGG | 1 cut(s) | 251 |
| EcoT22I | ATGCAT | 4 cut(s) | 460, 476, 1366, 1498 |
| ErhI | CCWWGG | 1 cut(s) | 251 |
| Esp3I | CGTCTC | 1 cut(s) | 130 |
| FaqI | GGGAC | 4 cut(s) | 176, 406, 2036, 2061 |
| FauI | CCCGC | 1 cut(s) | 579 |
| FauNDI | CATATG | 4 cut(s) | 522, 589, 1366, 1507 |
| FblI | GTMKAC | 2 cut(s) | 369, 1805 |
| Fnu4HI | GCNGC | 8 cut(s) | 152, 292, 810, 1137, 1371, 1959, 2016, 2034 |
| FokI | GGATG | 3 cut(s) | 905, 1542, 2008 |
| Fsp4HI | GCNGC | 8 cut(s) | 152, 292, 810, 1137, 1371, 1959, 2016, 2034 |
| FspBI | CTAG | 6 cut(s) | 147, 389, 486, 954, 1757, 1826 |
| GlaI | GCGC | 1 cut(s) | 290 |
| GluI | GCNGC | 8 cut(s) | 152, 292, 810, 1137, 1371, 1959, 2016, 2034 |
| HaeIII | GGCC | 1 cut(s) | 1824 |
| HapII | CCGG | 3 cut(s) | 655, 713, 1188 |
| HgaI | GACGC | 2 cut(s) | 116, 1135 |
| HhaI | GCGC | 1 cut(s) | 291 |
| Hin1I | GRCGYC | 2 cut(s) | 108, 1127 |
| Hin6I | GCGC | 1 cut(s) | 289 |
| HinP1I | GCGC | 1 cut(s) | 289 |
| HincII | GTYRAC | 1 cut(s) | 370 |
| HindII | GTYRAC | 1 cut(s) | 370 |
| HindIII | AAGCTT | 1 cut(s) | 1984 |
| HinfI | GANTC | 7 cut(s) | 140, 224, 761, 1238, 1796, 1802, 2093 |
| HpaII | CCGG | 3 cut(s) | 655, 713, 1188 |
| HphI | GGTGA | 5 cut(s) | 87, 702, 977, 1855, 2122 |
| Hpy166II | GTNNAC | 5 cut(s) | 370, 985, 1379, 1806, 2125 |
| Hpy188I | TCNGA | 9 cut(s) | 136, 858, 904, 1172, 1279, 1492, 1582, 1801, 2113 |
| Hpy8I | GTNNAC | 5 cut(s) | 370, 985, 1379, 1806, 2125 |
| Hpy99I | CGWCG | 1 cut(s) | 104 |
| HpyAV | CCTTC | 9 cut(s) | 550, 655, 741, 769, 791, 1066, 1583, 1795, 1878 |
| HpyCH4III | ACNGT | 3 cut(s) | 180, 806, 1383 |
| HpyCH4IV | ACGT | 2 cut(s) | 727, 2050 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 491, 1157, 1370, 2012 |
| HpyF3I | CTNAG | 6 cut(s) | 342, 679, 1100, 1408, 1724, 2110 |
| HpySE526I | ACGT | 2 cut(s) | 727, 2050 |
| Hsp92I | GRCGYC | 2 cut(s) | 108, 1127 |
| HspAI | GCGC | 1 cut(s) | 289 |
| Kzo9I | GATC | 7 cut(s) | 831, 1316, 1515, 1630, 1729, 1918, 2068 |
| LmnI | GCTCC | 5 cut(s) | 159, 482, 499, 756, 1540 |
| Lsp1109I | GCAGC | 6 cut(s) | 163, 821, 1123, 1382, 2002, 2020 |
| LweI | GCATC | 7 cut(s) | 208, 270, 461, 1481, 1483, 1520, 1869 |
| MaeI | CTAG | 6 cut(s) | 147, 389, 486, 954, 1757, 1826 |
| MaeII | ACGT | 2 cut(s) | 727, 2050 |
| MaeIII | GTNAC | 6 cut(s) | 650, 800, 968, 1330, 1682, 1906 |
| MalI | GATC | 7 cut(s) | 833, 1318, 1517, 1632, 1731, 1920, 2070 |
| MboI | GATC | 7 cut(s) | 831, 1316, 1515, 1630, 1729, 1918, 2068 |
| MfeI | CAATTG | 1 cut(s) | 1484 |
| MflI | RGATCY | 1 cut(s) | 1918 |
| MhlI | GDGCHC | 1 cut(s) | 1572 |
| MlyI | GAGTC | 2 cut(s) | 770, 1811 |
| MmeI | TCCRAC | 1 cut(s) | 490 |
| Mph1103I | ATGCAT | 4 cut(s) | 460, 476, 1366, 1498 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1292, 1876, 1902, 2180 |
| MspA1I | CMGCKG | 2 cut(s) | 1136, 1961 |
| MspCI | CTTAAG | 1 cut(s) | 1981 |
| MspI | CCGG | 3 cut(s) | 655, 713, 1188 |
| MspR9I | CCNGG | 3 cut(s) | 159, 206, 743 |
| MunI | CAATTG | 1 cut(s) | 1484 |
| Mva1269I | GAATGC | 2 cut(s) | 852, 2157 |
| MvaI | CCWGG | 3 cut(s) | 159, 206, 743 |
| MvnI | CGCG | 1 cut(s) | 309 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 491, 1157, 1370, 2012 |
| NcoI | CCATGG | 1 cut(s) | 251 |
| NdeI | CATATG | 4 cut(s) | 522, 589, 1366, 1507 |
| NdeII | GATC | 7 cut(s) | 831, 1316, 1515, 1630, 1729, 1918, 2068 |
| NlaIV | GGNNCC | 4 cut(s) | 752, 1087, 1542, 2024 |
| NmeAIII | GCCGAG | 1 cut(s) | 1034 |
| NmuCI | GTSAC | 4 cut(s) | 650, 800, 968, 1906 |
| NruI | TCGCGA | 1 cut(s) | 309 |
| NsiI | ATGCAT | 4 cut(s) | 460, 476, 1366, 1498 |
| NspI | RCATGY | 4 cut(s) | 376, 875, 1099, 1297 |
| OliI | CACNNNNGTG | 1 cut(s) | 1902 |
| PaeI | GCATGC | 1 cut(s) | 1099 |
| PasI | CCCWGGG | 1 cut(s) | 158 |
| PciI | ACATGT | 2 cut(s) | 372, 1293 |
| PctI | GAATGC | 2 cut(s) | 852, 2157 |
| PfeI | GAWTC | 5 cut(s) | 140, 224, 1238, 1796, 2093 |
| PfoI | TCCNGGA | 1 cut(s) | 204 |
| PkrI | GCNGC | 8 cut(s) | 153, 293, 811, 1138, 1372, 1960, 2017, 2035 |
| PleI | GAGTC | 2 cut(s) | 769, 1810 |
| PpsI | GAGTC | 2 cut(s) | 769, 1810 |
| Ppu21I | YACGTR | 1 cut(s) | 728 |
| PpuMI | RGGWCCY | 1 cut(s) | 778 |
| PscI | ACATGT | 2 cut(s) | 372, 1293 |
| PsiI | TTATAA | 1 cut(s) | 1556 |
| Psp5II | RGGWCCY | 1 cut(s) | 778 |
| Psp6I | CCWGG | 3 cut(s) | 157, 204, 741 |
| PspGI | CCWGG | 3 cut(s) | 157, 204, 741 |
| PspN4I | GGNNCC | 4 cut(s) | 752, 1087, 1542, 2024 |
| PspPI | GGNCC | 3 cut(s) | 593, 778, 2023 |
| PspPPI | RGGWCCY | 1 cut(s) | 778 |
| PstI | CTGCAG | 2 cut(s) | 1705, 2020 |
| PstNI | CAGNNNCTG | 1 cut(s) | 804 |
| PsuI | RGATCY | 1 cut(s) | 1918 |
| PvuII | CAGCTG | 1 cut(s) | 1136 |
| RruI | TCGCGA | 1 cut(s) | 309 |
| RsaI | GTAC | 4 cut(s) | 190, 1145, 1404, 1741 |
| RsaNI | GTAC | 4 cut(s) | 189, 1144, 1403, 1740 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1292, 1876, 1902, 2180 |
| SalI | GTCGAC | 1 cut(s) | 368 |
| SatI | GCNGC | 8 cut(s) | 152, 292, 810, 1137, 1371, 1959, 2016, 2034 |
| Sau3AI | GATC | 7 cut(s) | 831, 1316, 1515, 1630, 1729, 1918, 2068 |
| Sau96I | GGNCC | 3 cut(s) | 593, 778, 2023 |
| SchI | GAGTC | 2 cut(s) | 770, 1811 |
| ScrFI | CCNGG | 3 cut(s) | 159, 206, 743 |
| SduI | GDGCHC | 1 cut(s) | 1572 |
| SfaNI | GCATC | 7 cut(s) | 208, 270, 461, 1481, 1483, 1520, 1869 |
| SfcI | CTRYAG | 4 cut(s) | 835, 1090, 1701, 2016 |
| SinI | GGWCC | 3 cut(s) | 593, 778, 2023 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1292, 1876, 1902, 2180 |
| SmlI | CTYRAG | 5 cut(s) | 881, 1616, 1657, 1715, 1981 |
| SmoI | CTYRAG | 5 cut(s) | 881, 1616, 1657, 1715, 1981 |
| SphI | GCATGC | 1 cut(s) | 1099 |
| SsiI | CCGC | 4 cut(s) | 78, 292, 572, 1959 |
| SspMI | CTAG | 6 cut(s) | 147, 389, 486, 954, 1757, 1826 |
| StyD4I | CCNGG | 3 cut(s) | 157, 204, 741 |
| StyI | CCWWGG | 1 cut(s) | 251 |
| TaaI | ACNGT | 3 cut(s) | 180, 806, 1383 |
| TaiI | ACGT | 2 cut(s) | 730, 2053 |
| TaqI | TCGA | 8 cut(s) | 102, 143, 213, 369, 615, 923, 1566, 1884 |
| TaqII | GACCGA | 2 cut(s) | 2040, 2070 |
| TatI | WGTACW | 2 cut(s) | 1143, 1739 |
| TauI | GCSGC | 2 cut(s) | 294, 1961 |
| TfiI | GAWTC | 5 cut(s) | 140, 224, 1238, 1796, 2093 |
| TscAI | CASTG | 4 cut(s) | 190, 805, 1005, 1915 |
| TseFI | GTSAC | 4 cut(s) | 650, 800, 968, 1906 |
| TseI | GCWGC | 6 cut(s) | 151, 809, 1136, 1370, 2015, 2033 |
| Tsp45I | GTSAC | 4 cut(s) | 650, 800, 968, 1906 |
| TspGWI | ACGGA | 2 cut(s) | 341, 585 |
| TspRI | CASTG | 4 cut(s) | 190, 805, 1005, 1915 |
| Vha464I | CTTAAG | 1 cut(s) | 1981 |
| VpaK11BI | GGWCC | 3 cut(s) | 593, 778, 2023 |
| XapI | RAATTY | 9 cut(s) | 119, 540, 788, 859, 990, 1120, 1323, 1419, 2055 |
| XbaI | TCTAGA | 1 cut(s) | 1756 |
| XceI | RCATGY | 4 cut(s) | 376, 875, 1099, 1297 |
| XmiI | GTMKAC | 2 cut(s) | 369, 1805 |
| XspI | CTAG | 6 cut(s) | 147, 389, 486, 954, 1757, 1826 |
| Zsp2I | ATGCAT | 4 cut(s) | 460, 476, 1366, 1498 |