AT4G35180

LHT7 LHT7 (Lys His transporter 7)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
16737835 .. 16740601
2767 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G35180.2

Sequence Viewer

Length: 1437 bp
ATGTCTATAGCATTGGGAAACTTATTTGATTTGGAATCACAAGAAAGTGGTGGTTCTCCTTTATTTATGTCACCAGCCCCCTCCACGGATCCACAACCAATCTCCGGCGAAAAAAACGGCGGCGATGGTGGTAGGATTCCGGTAGAAGAGTGGCTGCCGATCACAGAATCAAGAAAAGGAAATGTTTATACGGCGACGTTTCATCTTCTCTGTTCGGGAATTGGTCTCCAAGTGATTCTTCTTCCTGCAGCTTTCGCAGCACTCGGATGGGTATGGGGAACGATAATCTTAACGGTAGGGTTTGTATGGAAGCTCTACACGACGTGGCTTCTTGTTCAACTCCACGAAGCGGTTCCGGGAATTCGTATCAGCAGATACGTGAGACTCGCAATTGCTTCTTTTGGTGTGAAGCTTGGGAAACTTCTCGGAATATTCCCTGTGATGTATCTCTCAGGAGGAGCTTGTACGATTCTGGTTATAACCGGAGGGAAATCAATACAACAACTGTTACAAATTATGTCTGACGACAATACAGCGCCACTTACTTCAGTGCAATGCTTCTTGGTTTTTAGTTGCATTGCGATGATCATGTCTCAGTTTCCGAATCTAAATTCTCTCTTTGGAGTCTCGTTGATCGGTGCTTTTATGGGAATTGCGTATTGCACCGTGATATGGATTTTACCTGTAGCTAGTGACTCACAAAGGACTCAAGTCAGTGTCTCGTACGCTACAATGGATAAAAGTTTCGTTCACATTTTCAACGCTATTGGATTGATAGCTCTAGTATATCGCGGGAACAATCTCGTCCTTGAGATACAGGGTACTCTTCCTTCCGATTCAAAGAACCCTTCATGTAAGACAATGTGGAGAGCAGTGATGATCTCTCATGCTCTCGTCGCGATTTGTATGTTTCCATTAACGTTTGCTGTATATTGGGCATACGGAGACAAGATTCCGGCGACGGGAGGTCCCGTGGGCAACTATCTGAAACTTTACACACAAGAGCACTCGAAGCGAGCAGCCTGTTTCATACACCTCACGTTTATCTTCTCTTGCTTATGTTCATATCCGATAAACTTAATGCCGGCGTGTGACAACATAGAGATGGTGTACATAACCAAGAAGAAAAAGCCTGCATCCATCATTGTCCGGATGATGTTGCGTGTGTTTTTGAGCTTGGTTTGTTTCACTATAGCCGTTGGATTCCCGTTCTTGCCTTATCTAGCGGTTCTTATTGGAGCAATAGCCTTGCTTGTGACGTTTACGTATCCATGTTTCATGTGGATCTCTATCAAAAAGCCCCAAAGGAAAAGCCCAATGTGGTTGTTTAACGTTTTGGTGGGTTGCCTAGGTGCTTCTCTCAGCGTTTTGCTTCTGGTTGCCTCGGCTATGCGTTTGGCTCAAAAGGGTTTGCATGCTAACTTCTTCAGACCCTAA

Protein Analysis

478

Amino Acids

52.29

Weight (kDa)

9.18

Isoelectric Point (pI)

43.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 59 - 318 1.9e-39 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 479
AccII CGCG 2 cut(s) 792, 899
AccIII TCCGGA 1 cut(s) 1149
AciI CCGC 4 cut(s) 120, 350, 792, 1226
AclI AACGTT 2 cut(s) 920, 1332
AclWI GGATC 3 cut(s) 83, 96, 1292
AcsI RAATTY 2 cut(s) 360, 610
AcuI CTGAAG 2 cut(s) 531, 1411
AdeI CACNNNGTG 1 cut(s) 324
AfaI GTAC 4 cut(s) 466, 725, 823, 1112
AfiI CCNNNNNNNGG 5 cut(s) 85, 104, 349, 672, 962
AgsI TTSAA 3 cut(s) 338, 760, 840
AhdI GACNNNNNGTC 1 cut(s) 966
AjiI CACGTC 1 cut(s) 324
AjuI GAANNNNNNNTTGG 2 cut(s) 222, 254
AluBI AGCT 7 cut(s) 251, 313, 412, 461, 689, 779, 1176
AluI AGCT 7 cut(s) 251, 313, 412, 461, 689, 779, 1176
Alw21I GWGCWC 1 cut(s) 1008
Alw26I GTCTC 6 cut(s) 230, 376, 597, 631, 724, 939
AlwI GGATC 3 cut(s) 83, 96, 1292
Aor13HI TCCGGA 1 cut(s) 1149
ApeKI GCWGC 4 cut(s) 154, 248, 257, 1019
ApoI RAATTY 2 cut(s) 360, 610
Asp700I GAANNNNTTC 1 cut(s) 351
AspA2I CCTAGG 1 cut(s) 1348
AspLEI GCGC 1 cut(s) 538
AspS9I GGNCC 1 cut(s) 968
AsuC2I CCSGG 1 cut(s) 357
AsuHPI GGTGA 1 cut(s) 63
AvaII GGWCC 1 cut(s) 968
AvrII CCTAGG 1 cut(s) 1348
BamHI GGATCC 1 cut(s) 88
BarI GAAGNNNNNNTAC 2 cut(s) 814, 846
Bbv12I GWGCWC 1 cut(s) 1008
BbvI GCAGC 4 cut(s) 141, 260, 269, 1031
BccI CCATC 4 cut(s) 119, 261, 1099, 1148
BceAI ACGGC 3 cut(s) 133, 207, 1181
BciVI GTATCC 1 cut(s) 1278
BclI TGATCA 1 cut(s) 585
BcnI CCSGG 1 cut(s) 357
BcoDI GTCTC 6 cut(s) 230, 376, 597, 631, 724, 939
BfaI CTAG 4 cut(s) 690, 782, 1223, 1349
BfmI CTRYAG 4 cut(s) 6, 246, 684, 1191
BfoI RGCGCY 1 cut(s) 539
BfuI GTATCC 1 cut(s) 1278
BisI GCNGC 5 cut(s) 121, 155, 249, 258, 1020
BlnI CCTAGG 1 cut(s) 1348
BlsI GCNGC 5 cut(s) 122, 156, 250, 259, 1021
Bme1390I CCNGG 1 cut(s) 357
Bme18I GGWCC 1 cut(s) 968
BmeRI GACNNNNNGTC 1 cut(s) 966
BmgBI CACGTC 1 cut(s) 324
BmgT120I GGNCC 1 cut(s) 968
BmiI GGNNCC 3 cut(s) 90, 354, 970
BmrFI CCNGG 1 cut(s) 357
BmsI GCATC 1 cut(s) 1145
BoxI GACNNNNGTC 1 cut(s) 710
BpuEI CTTGAG 2 cut(s) 693, 830
BpuMI CCSGG 1 cut(s) 357
BsaAI YACGTR 2 cut(s) 379, 1266
BsaBI GATNNNNATC 1 cut(s) 1289
BsaI GGTCTC 1 cut(s) 230
BsaJI CCNNGG 4 cut(s) 84, 972, 1348, 1383
BsaWI WCCGGW 3 cut(s) 139, 482, 1149
BsaXI ACNNNNNCTCC 2 cut(s) 957, 987
Bsc4I CCNNNNNNNGG 5 cut(s) 85, 104, 349, 672, 962
Bse118I RCCGGY 1 cut(s) 1084
Bse3DI GCAATG 2 cut(s) 560, 576
Bse8I GATNNNNATC 1 cut(s) 1289
BseAI TCCGGA 1 cut(s) 1149
BseDI CCNNGG 4 cut(s) 84, 972, 1348, 1383
BseGI GGATG 3 cut(s) 272, 1136, 1158
BseJI GATNNNNATC 1 cut(s) 1289
BseLI CCNNNNNNNGG 5 cut(s) 85, 104, 349, 672, 962
BseMI GCAATG 2 cut(s) 560, 576
BseMII CTCAG 3 cut(s) 465, 608, 1375
BseRI GAGGAG 1 cut(s) 471
BseXI GCAGC 4 cut(s) 141, 260, 269, 1031
Bsh1236I CGCG 2 cut(s) 792, 899
BsiHKAI GWGCWC 1 cut(s) 1008
BsiSI CCGG 7 cut(s) 105, 140, 356, 483, 956, 1085, 1150
BsiWI CGTACG 1 cut(s) 723
BslFI GGGAC 1 cut(s) 954
BslI CCNNNNNNNGG 5 cut(s) 85, 104, 349, 672, 962
BsmAI GTCTC 6 cut(s) 230, 376, 597, 631, 724, 939
BsmFI GGGAC 1 cut(s) 954
Bso31I GGTCTC 1 cut(s) 230
Bsp1286I GDGCHC 1 cut(s) 1008
Bsp13I TCCGGA 1 cut(s) 1149
Bsp1407I TGTACA 1 cut(s) 1110
Bsp143I GATC 6 cut(s) 88, 159, 585, 633, 879, 1284
Bsp68I TCGCGA 1 cut(s) 899
BspACI CCGC 4 cut(s) 120, 350, 792, 1226
BspCNI CTCAG 3 cut(s) 464, 607, 1374
BspEI TCCGGA 1 cut(s) 1149
BspFNI CGCG 2 cut(s) 792, 899
BspLI GGNNCC 3 cut(s) 90, 354, 970
BspMAI CTGCAG 1 cut(s) 250
BspPI GGATC 3 cut(s) 83, 96, 1292
BspTNI GGTCTC 1 cut(s) 230
BsrDI GCAATG 2 cut(s) 560, 576
BsrFI RCCGGY 1 cut(s) 1084
BsrGI TGTACA 1 cut(s) 1110
BssAI RCCGGY 1 cut(s) 1084
BssECI CCNNGG 4 cut(s) 84, 972, 1348, 1383
BssMI GATC 6 cut(s) 88, 159, 585, 633, 879, 1284
BssT1I CCWWGG 1 cut(s) 1348
Bst4CI ACNGT 3 cut(s) 295, 507, 667
Bst6I CTCTTC 2 cut(s) 141, 831
BstAUI TGTACA 1 cut(s) 1110
BstBAI YACGTR 2 cut(s) 379, 1266
BstC8I GCNNGC 4 cut(s) 1017, 1086, 1134, 1416
BstDEI CTNAG 3 cut(s) 451, 594, 1361
BstDSI CCRYGG 2 cut(s) 84, 972
BstF5I GGATG 3 cut(s) 272, 1136, 1158
BstFNI CGCG 2 cut(s) 792, 899
BstH2I RGCGCY 1 cut(s) 539
BstHHI GCGC 1 cut(s) 538
BstKTI GATC 6 cut(s) 91, 162, 588, 636, 882, 1287
BstMAI GTCTC 6 cut(s) 230, 376, 597, 631, 724, 939
BstMBI GATC 6 cut(s) 88, 159, 585, 633, 879, 1284
BstMWI GCNNNNNNNGC 4 cut(s) 254, 257, 896, 1012
BstNSI RCATGY 1 cut(s) 1418
BstPAI GACNNNNGTC 1 cut(s) 710
BstSCI CCNGG 1 cut(s) 355
BstSFI CTRYAG 4 cut(s) 6, 246, 684, 1191
BstSNI TACGTA 1 cut(s) 1266
BstUI CGCG 2 cut(s) 792, 899
BstV1I GCAGC 4 cut(s) 141, 260, 269, 1031
BstX2I RGATCY 2 cut(s) 88, 1284
BstYI RGATCY 2 cut(s) 88, 1284
BsuI GTATCC 1 cut(s) 1278
BtgI CCRYGG 2 cut(s) 84, 972
BtgZI GCGATG 2 cut(s) 138, 596
BtrI CACGTC 1 cut(s) 324
BtsCI GGATG 3 cut(s) 272, 1136, 1158
BtsI GCAGTG 1 cut(s) 879
BtsIMutI CAGTG 3 cut(s) 555, 721, 879
BtuMI TCGCGA 1 cut(s) 899
Cac8I GCNNGC 4 cut(s) 1017, 1086, 1134, 1416
CfoI GCGC 1 cut(s) 538
Cfr10I RCCGGY 1 cut(s) 1084
Cfr13I GGNCC 1 cut(s) 968
Csp6I GTAC 4 cut(s) 465, 724, 822, 1111
CviAII CATG 6 cut(s) 589, 852, 887, 1272, 1279, 1415
CviQI GTAC 4 cut(s) 465, 724, 822, 1111
DdeI CTNAG 3 cut(s) 451, 594, 1361
DpnI GATC 6 cut(s) 90, 161, 587, 635, 881, 1286
DpnII GATC 6 cut(s) 88, 159, 585, 633, 879, 1284
DraIII CACNNNGTG 1 cut(s) 324
DriI GACNNNNNGTC 1 cut(s) 966
Eam1104I CTCTTC 2 cut(s) 141, 831
Eam1105I GACNNNNNGTC 1 cut(s) 966
EarI CTCTTC 2 cut(s) 141, 831
Eco105I TACGTA 1 cut(s) 1266
Eco130I CCWWGG 1 cut(s) 1348
Eco31I GGTCTC 1 cut(s) 230
Eco47I GGWCC 1 cut(s) 968
Eco57I CTGAAG 2 cut(s) 531, 1411
EcoO109I RGGNCCY 1 cut(s) 968
EcoRI GAATTC 1 cut(s) 360
EcoT14I CCWWGG 1 cut(s) 1348
ErhI CCWWGG 1 cut(s) 1348
FaeI CATG 6 cut(s) 592, 855, 890, 1275, 1282, 1418
FalI AAGNNNNNCTT 2 cut(s) 222, 254
FaqI GGGAC 1 cut(s) 954
FatI CATG 6 cut(s) 588, 851, 886, 1271, 1278, 1414
FauI CCCGC 1 cut(s) 785
FbaI TGATCA 1 cut(s) 585
Fnu4HI GCNGC 5 cut(s) 121, 155, 249, 258, 1020
FokI GGATG 3 cut(s) 279, 1123, 1165
Fsp4HI GCNGC 5 cut(s) 121, 155, 249, 258, 1020
FspBI CTAG 4 cut(s) 690, 782, 1223, 1349
GlaI GCGC 1 cut(s) 537
GluI GCNGC 5 cut(s) 121, 155, 249, 258, 1020
HaeII RGCGCY 1 cut(s) 539
HapII CCGG 7 cut(s) 105, 140, 356, 483, 956, 1085, 1150
HhaI GCGC 1 cut(s) 538
Hin1II CATG 6 cut(s) 592, 855, 890, 1275, 1282, 1418
Hin6I GCGC 1 cut(s) 536
HinP1I GCGC 1 cut(s) 536
HindIII AAGCTT 1 cut(s) 410
HpaII CCGG 7 cut(s) 105, 140, 356, 483, 956, 1085, 1150
HphI GGTGA 1 cut(s) 63
Hpy166II GTNNAC 3 cut(s) 751, 1111, 1263
Hpy188I TCNGA 8 cut(s) 266, 428, 523, 603, 835, 987, 1071, 1430
Hpy188III TCNNGA 5 cut(s) 171, 216, 453, 898, 1150
Hpy8I GTNNAC 3 cut(s) 751, 1111, 1263
Hpy99I CGWCG 4 cut(s) 199, 325, 899, 964
HpyAV CCTTC 2 cut(s) 840, 858
HpyCH4III ACNGT 3 cut(s) 295, 507, 667
HpyCH4IV ACGT 8 cut(s) 197, 323, 378, 920, 1040, 1259, 1265, 1332
HpyCH4V TGCA 6 cut(s) 248, 553, 576, 663, 1136, 1414
HpyF10VI GCNNNNNNNGC 4 cut(s) 254, 257, 896, 1012
HpyF3I CTNAG 3 cut(s) 451, 594, 1361
HpySE526I ACGT 8 cut(s) 197, 323, 378, 920, 1040, 1259, 1265, 1332
Hsp92II CATG 6 cut(s) 592, 855, 890, 1275, 1282, 1418
HspAI GCGC 1 cut(s) 536
Kpn2I TCCGGA 1 cut(s) 1149
KroI GCCGGC 1 cut(s) 1084
KroNI GCCGGC 1 cut(s) 1086
Ksp22I TGATCA 1 cut(s) 585
Kzo9I GATC 6 cut(s) 88, 159, 585, 633, 879, 1284
LmnI GCTCC 2 cut(s) 458, 1238
Lsp1109I GCAGC 4 cut(s) 141, 260, 269, 1031
LweI GCATC 1 cut(s) 1145
MaeI CTAG 4 cut(s) 690, 782, 1223, 1349
MaeII ACGT 8 cut(s) 197, 323, 378, 920, 1040, 1259, 1265, 1332
MaeIII GTNAC 5 cut(s) 69, 507, 692, 1091, 1255
MalI GATC 6 cut(s) 90, 161, 587, 635, 881, 1286
MboI GATC 6 cut(s) 88, 159, 585, 633, 879, 1284
MboII GAAGA 8 cut(s) 158, 197, 230, 233, 818, 1039, 1135, 1417
MfeI CAATTG 1 cut(s) 390
MflI RGATCY 2 cut(s) 88, 1284
MhlI GDGCHC 1 cut(s) 1008
MluCI AATT 6 cut(s) 219, 360, 390, 513, 610, 651
MlyI GAGTC 4 cut(s) 378, 633, 689, 700
MmeI TCCRAC 1 cut(s) 1180
MnlI CCTC 6 cut(s) 91, 449, 479, 959, 1046, 1393
MroI TCCGGA 1 cut(s) 1149
MroNI GCCGGC 1 cut(s) 1084
MroXI GAANNNNTTC 1 cut(s) 351
MseI TTAA 4 cut(s) 290, 917, 1079, 1329
MslI CAYNNNNRTG 3 cut(s) 265, 581, 1103
MspI CCGG 7 cut(s) 105, 140, 356, 483, 956, 1085, 1150
MspR9I CCNGG 1 cut(s) 357
MunI CAATTG 1 cut(s) 390
MvnI CGCG 2 cut(s) 792, 899
MwoI GCNNNNNNNGC 4 cut(s) 254, 257, 896, 1012
NaeI GCCGGC 1 cut(s) 1086
NciI CCSGG 1 cut(s) 357
NdeII GATC 6 cut(s) 88, 159, 585, 633, 879, 1284
NgoMIV GCCGGC 1 cut(s) 1084
NlaIII CATG 6 cut(s) 592, 855, 890, 1275, 1282, 1418
NlaIV GGNNCC 3 cut(s) 90, 354, 970
NmeAIII GCCGAG 1 cut(s) 1364
NmuCI GTSAC 4 cut(s) 69, 692, 1091, 1255
NruI TCGCGA 1 cut(s) 899
NspI RCATGY 1 cut(s) 1418
PaeI GCATGC 1 cut(s) 1418
PdiI GCCGGC 1 cut(s) 1086
PdmI GAANNNNTTC 1 cut(s) 351
PfeI GAWTC 9 cut(s) 35, 136, 167, 235, 469, 604, 836, 952, 1203
Pfl23II CGTACG 1 cut(s) 723
PfoI TCCNGGA 1 cut(s) 355
PkrI GCNGC 5 cut(s) 122, 156, 250, 259, 1021
PleI GAGTC 4 cut(s) 378, 632, 689, 700
PpsI GAGTC 4 cut(s) 378, 632, 689, 700
Ppu21I YACGTR 2 cut(s) 379, 1266
PpuMI RGGWCCY 1 cut(s) 968
PshAI GACNNNNGTC 1 cut(s) 710
PsiI TTATAA 1 cut(s) 479
Psp1406I AACGTT 2 cut(s) 920, 1332
Psp5II RGGWCCY 1 cut(s) 968
PspLI CGTACG 1 cut(s) 723
PspN4I GGNNCC 3 cut(s) 90, 354, 970
PspPI GGNCC 1 cut(s) 968
PspPPI RGGWCCY 1 cut(s) 968
PstI CTGCAG 1 cut(s) 250
PsuI RGATCY 2 cut(s) 88, 1284
RruI TCGCGA 1 cut(s) 899
RsaI GTAC 4 cut(s) 466, 725, 823, 1112
RsaNI GTAC 4 cut(s) 465, 724, 822, 1111
RseI CAYNNNNRTG 3 cut(s) 265, 581, 1103
SaqAI TTAA 4 cut(s) 290, 917, 1079, 1329
SatI GCNGC 5 cut(s) 121, 155, 249, 258, 1020
Sau3AI GATC 6 cut(s) 88, 159, 585, 633, 879, 1284
Sau96I GGNCC 1 cut(s) 968
SchI GAGTC 4 cut(s) 378, 633, 689, 700
ScrFI CCNGG 1 cut(s) 357
SduI GDGCHC 1 cut(s) 1008
SfaNI GCATC 1 cut(s) 1145
SfcI CTRYAG 4 cut(s) 6, 246, 684, 1191
SinI GGWCC 1 cut(s) 968
SmiMI CAYNNNNRTG 3 cut(s) 265, 581, 1103
SmlI CTYRAG 2 cut(s) 708, 809
SmoI CTYRAG 2 cut(s) 708, 809
SnaBI TACGTA 1 cut(s) 1266
SphI GCATGC 1 cut(s) 1418
Sse9I AATT 6 cut(s) 219, 360, 390, 513, 610, 651
SsiI CCGC 4 cut(s) 120, 350, 792, 1226
SspI AATATT 1 cut(s) 432
SspMI CTAG 4 cut(s) 690, 782, 1223, 1349
StyD4I CCNGG 1 cut(s) 355
StyI CCWWGG 1 cut(s) 1348
TaaI ACNGT 3 cut(s) 295, 507, 667
TaiI ACGT 8 cut(s) 200, 326, 381, 923, 1043, 1262, 1268, 1335
TaqI TCGA 1 cut(s) 1010
TasI AATT 6 cut(s) 219, 360, 390, 513, 610, 651
TatI WGTACW 1 cut(s) 1110
TauI GCSGC 1 cut(s) 123
TfiI GAWTC 9 cut(s) 35, 136, 167, 235, 469, 604, 836, 952, 1203
Tru1I TTAA 4 cut(s) 290, 917, 1079, 1329
Tru9I TTAA 4 cut(s) 290, 917, 1079, 1329
TscAI CASTG 3 cut(s) 555, 721, 879
TseFI GTSAC 4 cut(s) 69, 692, 1091, 1255
TseI GCWGC 4 cut(s) 154, 248, 257, 1019
Tsp45I GTSAC 4 cut(s) 69, 692, 1091, 1255
TspDTI ATGAA 5 cut(s) 191, 840, 1018, 1053, 1267
TspGWI ACGGA 2 cut(s) 101, 957
TspRI CASTG 3 cut(s) 555, 721, 879
VpaK11BI GGWCC 1 cut(s) 968
XapI RAATTY 2 cut(s) 360, 610
XceI RCATGY 1 cut(s) 1418
XcmI CCANNNNNNNNNTGG 1 cut(s) 1278
XmaJI CCTAGG 1 cut(s) 1348
XmnI GAANNNNTTC 1 cut(s) 351
XspI CTAG 4 cut(s) 690, 782, 1223, 1349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.