pycom05g12580

Lysine histidine transporter-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
16001608 .. 16004065
2458 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g12580.5

Sequence Viewer

Length: 1521 bp
ATGGCAGCAATGGAAGAAGTGGTTGTGGAGGCAAATTGGAGCATAGATAGGGTTTATTCCTTTAGAAGCGCAAGTAGAAGATCAGAATCTGCTCAAGTCATTCCCATCACAACAAGTCCCACGAGTGAAGATTCTAACTATCATGTTACTTCAGCTGCAAACTGGGGAGGCGGTGAGCTCAATCCACAAGATGCTTGGCTACCCATCACAGAGTCCAGGAATGGGAATACCTTTTCAGCTACCTTCCTTTTGCTTTGTTCAGGAATTGGAATCCAAGCCCTTTTACTGCCTGTTGCACTTGCCACTCTTGGATGGGCATGGGGAATCATATGCTTGTCACTTGCATTTACATGGCAGCTCTACACGATATGGCTACTTGTACACCTACACGAATCCGATTCTGGAACTCGTTATAGTAGATACCTTGACCTCGCAACGACGGCCTTCGGTCAAAAGCTAGGGACGTTTTTAGCTCTAGTCCCAGTAATGTATTTATCAGCTGGTACATGTGTCCAGCTAATAATCTTAGGAGGTGGAACCATAAAGCTTTTCATCAAGACGGTGTGCAACGACGGGGCAAACTGTGATGCCAAGTCATTGACTAATGTAGAGTGCTTCCTGGTGTTCATGTGCATGGCTATTGTTGTGGCTCAGTTTCCCAACCTGAACTCCATAGCATGGGTCTCATTGATTGGTGCCACCACAGCTATAGCATATTGTACTTTGATTTGGGCTCTTTCAATTGGCAAGGGCAGGCCTAATGGCACTTCATACAACCCACCGGAGATGGATGACGAAATGGATAGATTTGGCGGGATTCTGAATGCTCTTGGCATCATTGTTCTTGCATTCAGAGGCCACAATGTTGTTCTTGAGATTCAGGTGAGTGGGACATTGCCTTTAAGTCTAAAACACCAAACTCACAAGCCAATGTGGAGAGGAGTTACTGTATCATACCTAATTATAGCAATGTGTTTGTATCCTCTTGCTATAGCTGGATTCTGGGCTTATGGAAACAAGGTACCTTCATCGAATGGAGGACTATTAATTGCAATGTCGAAATTCCATCAACATGACACATCAAAAATTGTGCTGGGACTCATATATGTACTTGTGGTCATAAATTGTATAAGTACATTCCAAATCTACAGCATGATAATTTTCGACAAACTAGAGACGAGCTACACTAGCAGGAAGAACAAGGCATGCGCAAGGTGGCTTCGAACAACTTTCCGTCTTTTCTTTGGAGGAATGACATTCTTTGCAGCAGTAACTCTTCCATTTTTGGGTAGCTTGGCGCCTCTAATTGGAGGATTGACATTACCACTGACATATGCTTATCCATGTTTGATGTGGATTGCAATAAAGAAACCAAAGCCGAAAAGTGTTATGTGGTGCATCAACGTGGGACTGGGAGGCTTAGGCCTTGTTCTGAGTGCTCTTTTAGTCATTGCAGCAGCATGGAACTTAGCTAGCAGAGGTCTTCATGCCAACTTCTTCAAGCCTTCAGACCTTAATTAG

Protein Analysis

507

Amino Acids

55.19

Weight (kDa)

8.8

Isoelectric Point (pI)

30.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1210
Acc65I GGTACC 1 cut(s) 1021
AccB1I GGYRCC 3 cut(s) 695, 1021, 1297
AccB7I CCANNNNNTGG 1 cut(s) 678
AciI CCGC 2 cut(s) 171, 813
AcsI RAATTY 1 cut(s) 1061
AcuI CTGAAG 2 cut(s) 135, 1491
AcyI GRCGYC 1 cut(s) 1298
AfaI GTAC 6 cut(s) 381, 505, 721, 1023, 1110, 1135
AfiI CCNNNNNNNGG 4 cut(s) 222, 678, 1286, 1307
AflIII ACRYGT 1 cut(s) 506
AgsI TTSAA 2 cut(s) 741, 1501
AjnI CCWGG 2 cut(s) 215, 618
Alw21I GWGCWC 2 cut(s) 180, 1441
Alw26I GTCTC 2 cut(s) 688, 1169
AlwNI CAGNNNCTG 1 cut(s) 89
AoxI GGCC 4 cut(s) 441, 755, 856, 1423
ApeKI GCWGC 6 cut(s) 5, 155, 355, 1265, 1454, 1457
ApoI RAATTY 1 cut(s) 1061
AseI ATTAAT 1 cut(s) 1046
Asp718I GGTACC 1 cut(s) 1021
AspLEI GCGC 3 cut(s) 71, 1211, 1300
AsuHPI GGTGA 2 cut(s) 185, 895
AsuII TTCGAA 1 cut(s) 1222
AsuNHI GCTAGC 1 cut(s) 1472
BaeI ACNNNNGTAYC 2 cut(s) 495, 528
BanI GGYRCC 3 cut(s) 695, 1021, 1297
BanII GRGCYC 2 cut(s) 180, 736
BauI CACGAG 1 cut(s) 121
BbsI GAAGAC 1 cut(s) 1475
Bbv12I GWGCWC 2 cut(s) 180, 1441
BbvI GCAGC 6 cut(s) 17, 142, 367, 1277, 1466, 1469
BccI CCATC 5 cut(s) 113, 212, 306, 781, 1074
BceAI ACGGC 1 cut(s) 456
BciT130I CCWGG 2 cut(s) 217, 620
BciVI GTATCC 1 cut(s) 990
BcoDI GTCTC 2 cut(s) 688, 1169
BfaI CTAG 5 cut(s) 458, 476, 1172, 1188, 1473
BfmI CTRYAG 3 cut(s) 708, 990, 1147
BfoI RGCGCY 1 cut(s) 1301
BfuI GTATCC 1 cut(s) 990
BisI GCNGC 6 cut(s) 6, 156, 356, 1266, 1455, 1458
BlsI GCNGC 6 cut(s) 7, 157, 357, 1267, 1456, 1459
Bme1390I CCNGG 2 cut(s) 217, 620
BmiI GGNNCC 4 cut(s) 538, 697, 1023, 1299
BmrFI CCNGG 2 cut(s) 217, 620
BmrI ACTGGG 3 cut(s) 172, 476, 1421
BmsI GCATC 4 cut(s) 181, 577, 843, 1407
BmtI GCTAGC 1 cut(s) 1476
BmuI ACTGGG 3 cut(s) 172, 476, 1421
BpiI GAAGAC 1 cut(s) 1475
Bpu10I CCTNAGC 1 cut(s) 1420
Bpu14I TTCGAA 1 cut(s) 1222
BpuEI CTTGAG 2 cut(s) 78, 893
BsaBI GATNNNNATC 1 cut(s) 85
BsaHI GRCGYC 1 cut(s) 1298
BsaI GGTCTC 1 cut(s) 688
BsaWI WCCGGW 1 cut(s) 781
BsaXI ACNNNNNCTCC 4 cut(s) 653, 683, 933, 963
Bsc4I CCNNNNNNNGG 4 cut(s) 222, 678, 1286, 1307
Bse1I ACTGG 3 cut(s) 167, 482, 1416
Bse3DI GCAATG 5 cut(s) 15, 893, 975, 1059, 1449
Bse8I GATNNNNATC 1 cut(s) 85
BseBI CCWGG 2 cut(s) 217, 620
BseGI GGATG 2 cut(s) 317, 796
BseJI GATNNNNATC 1 cut(s) 85
BseLI CCNNNNNNNGG 4 cut(s) 222, 678, 1286, 1307
BseMI GCAATG 5 cut(s) 15, 893, 975, 1059, 1449
BseMII CTCAG 2 cut(s) 665, 1424
BseNI ACTGG 3 cut(s) 167, 482, 1416
BseRI GAGGAG 1 cut(s) 954
BseXI GCAGC 6 cut(s) 17, 142, 367, 1277, 1466, 1469
BseYI CCCAGC 1 cut(s) 1093
BshFI GGCC 4 cut(s) 443, 757, 858, 1425
BshNI GGYRCC 3 cut(s) 695, 1021, 1297
BsiHKAI GWGCWC 2 cut(s) 180, 1441
BsiSI CCGG 1 cut(s) 782
BslFI GGGAC 6 cut(s) 102, 464, 475, 904, 1110, 1422
BslI CCNNNNNNNGG 4 cut(s) 222, 678, 1286, 1307
BsmAI GTCTC 2 cut(s) 688, 1169
BsmBI CGTCTC 1 cut(s) 1169
BsmFI GGGAC 6 cut(s) 102, 464, 475, 904, 1110, 1422
BsmI GAATGC 2 cut(s) 829, 848
BsnI GGCC 4 cut(s) 443, 757, 858, 1425
Bso31I GGTCTC 1 cut(s) 688
Bsp119I TTCGAA 1 cut(s) 1222
Bsp1286I GDGCHC 3 cut(s) 180, 736, 1441
Bsp1407I TGTACA 1 cut(s) 379
Bsp143I GATC 1 cut(s) 80
BspACI CCGC 2 cut(s) 171, 813
BspANI GGCC 4 cut(s) 443, 757, 858, 1425
BspCNI CTCAG 2 cut(s) 664, 1425
BspLI GGNNCC 4 cut(s) 538, 697, 1023, 1299
BspOI GCTAGC 1 cut(s) 1476
BspT104I TTCGAA 1 cut(s) 1222
BspT107I GGYRCC 3 cut(s) 695, 1021, 1297
BspTNI GGTCTC 1 cut(s) 688
BsrDI GCAATG 5 cut(s) 15, 893, 975, 1059, 1449
BsrGI TGTACA 1 cut(s) 379
BsrI ACTGG 3 cut(s) 167, 482, 1416
BssMI GATC 1 cut(s) 80
BssNI GRCGYC 1 cut(s) 1298
BssSI CACGAG 1 cut(s) 121
Bst2BI CACGAG 1 cut(s) 121
Bst2UI CCWGG 2 cut(s) 217, 620
Bst4CI ACNGT 3 cut(s) 562, 584, 949
Bst6I CTCTTC 1 cut(s) 1281
BstACI GRCGYC 1 cut(s) 1298
BstAUI TGTACA 1 cut(s) 379
BstBI TTCGAA 1 cut(s) 1222
BstC8I GCNNGC 3 cut(s) 755, 1207, 1474
BstDEI CTNAG 5 cut(s) 526, 651, 1420, 1433, 1468
BstF5I GGATG 2 cut(s) 317, 796
BstH2I RGCGCY 1 cut(s) 1301
BstHHI GCGC 3 cut(s) 71, 1211, 1300
BstKTI GATC 1 cut(s) 83
BstMAI GTCTC 2 cut(s) 688, 1169
BstMBI GATC 1 cut(s) 80
BstMWI GCNNNNNNNGC 3 cut(s) 440, 704, 1188
BstNI CCWGG 2 cut(s) 217, 620
BstNSI RCATGY 2 cut(s) 510, 1209
BstSCI CCNGG 2 cut(s) 215, 618
BstSFI CTRYAG 3 cut(s) 708, 990, 1147
BstV1I GCAGC 6 cut(s) 17, 142, 367, 1277, 1466, 1469
BstV2I GAAGAC 1 cut(s) 1475
BsuI GTATCC 1 cut(s) 990
BsuRI GGCC 4 cut(s) 443, 757, 858, 1425
BtsCI GGATG 2 cut(s) 317, 796
BtsIMutI CAGTG 1 cut(s) 1325
Cac8I GCNNGC 3 cut(s) 755, 1207, 1474
CaiI CAGNNNCTG 1 cut(s) 89
CfoI GCGC 3 cut(s) 71, 1211, 1300
Csp6I GTAC 6 cut(s) 380, 504, 720, 1022, 1109, 1134
CviQI GTAC 6 cut(s) 380, 504, 720, 1022, 1109, 1134
DdeI CTNAG 5 cut(s) 526, 651, 1420, 1433, 1468
DinI GGCGCC 1 cut(s) 1299
DpnI GATC 1 cut(s) 82
DpnII GATC 1 cut(s) 80
Eam1104I CTCTTC 1 cut(s) 1281
EarI CTCTTC 1 cut(s) 1281
Ecl136II GAGCTC 1 cut(s) 178
Eco147I AGGCCT 2 cut(s) 757, 1425
Eco24I GRGCYC 2 cut(s) 180, 736
Eco31I GGTCTC 1 cut(s) 688
Eco53kI GAGCTC 1 cut(s) 178
Eco57I CTGAAG 2 cut(s) 135, 1491
EcoICRI GAGCTC 1 cut(s) 178
EcoRII CCWGG 2 cut(s) 215, 618
EcoT38I GRGCYC 2 cut(s) 180, 736
EgeI GGCGCC 1 cut(s) 1299
EheI GGCGCC 1 cut(s) 1299
Esp3I CGTCTC 1 cut(s) 1169
FaqI GGGAC 6 cut(s) 102, 464, 475, 904, 1110, 1422
FauI CCCGC 1 cut(s) 806
FauNDI CATATG 2 cut(s) 329, 1333
Fnu4HI GCNGC 6 cut(s) 6, 156, 356, 1266, 1455, 1458
FokI GGATG 2 cut(s) 324, 803
FriOI GRGCYC 2 cut(s) 180, 736
Fsp4HI GCNGC 6 cut(s) 6, 156, 356, 1266, 1455, 1458
FspBI CTAG 5 cut(s) 458, 476, 1172, 1188, 1473
FspI TGCGCA 1 cut(s) 1210
GlaI GCGC 3 cut(s) 70, 1210, 1299
GluI GCNGC 6 cut(s) 6, 156, 356, 1266, 1455, 1458
GsaI CCCAGC 1 cut(s) 1097
HaeII RGCGCY 1 cut(s) 1301
HaeIII GGCC 4 cut(s) 443, 757, 858, 1425
HapII CCGG 1 cut(s) 782
HhaI GCGC 3 cut(s) 71, 1211, 1300
Hin1I GRCGYC 1 cut(s) 1298
Hin6I GCGC 3 cut(s) 69, 1209, 1298
HinP1I GCGC 3 cut(s) 69, 1209, 1298
HindIII AAGCTT 1 cut(s) 545
HpaII CCGG 1 cut(s) 782
HphI GGTGA 2 cut(s) 185, 895
Hpy166II GTNNAC 1 cut(s) 382
Hpy188I TCNGA 6 cut(s) 85, 397, 822, 854, 1434, 1510
Hpy188III TCNNGA 4 cut(s) 261, 402, 556, 872
Hpy8I GTNNAC 1 cut(s) 382
Hpy99I CGWCG 2 cut(s) 442, 575
HpyAV CCTTC 4 cut(s) 253, 454, 1035, 1515
HpyCH4III ACNGT 3 cut(s) 562, 584, 949
HpyCH4IV ACGT 2 cut(s) 464, 1404
HpyF10VI GCNNNNNNNGC 3 cut(s) 440, 704, 1188
HpyF3I CTNAG 5 cut(s) 526, 651, 1420, 1433, 1468
HpySE526I ACGT 2 cut(s) 464, 1404
Hsp92I GRCGYC 1 cut(s) 1298
HspAI GCGC 3 cut(s) 69, 1209, 1298
KasI GGCGCC 1 cut(s) 1297
KpnI GGTACC 1 cut(s) 1025
Kzo9I GATC 1 cut(s) 80
LmnI GCTCC 1 cut(s) 39
Lsp1109I GCAGC 6 cut(s) 17, 142, 367, 1277, 1466, 1469
LweI GCATC 4 cut(s) 181, 577, 843, 1407
MaeI CTAG 5 cut(s) 458, 476, 1172, 1188, 1473
MaeII ACGT 2 cut(s) 464, 1404
MaeIII GTNAC 4 cut(s) 145, 336, 943, 1270
MalI GATC 1 cut(s) 82
MboI GATC 1 cut(s) 80
MboII GAAGA 7 cut(s) 26, 90, 140, 1207, 1268, 1475, 1489
MfeI CAATTG 1 cut(s) 741
MhlI GDGCHC 3 cut(s) 180, 736, 1441
Mly113I GGCGCC 1 cut(s) 1298
MlyI GAGTC 2 cut(s) 221, 1092
MseI TTAA 3 cut(s) 902, 1046, 1515
MslI CAYNNNNRTG 4 cut(s) 349, 632, 1071, 1403
MspA1I CMGCKG 2 cut(s) 155, 500
MspI CCGG 1 cut(s) 782
MspR9I CCNGG 2 cut(s) 217, 620
MunI CAATTG 1 cut(s) 741
Mva1269I GAATGC 2 cut(s) 829, 848
MvaI CCWGG 2 cut(s) 217, 620
MwoI GCNNNNNNNGC 3 cut(s) 440, 704, 1188
NarI GGCGCC 1 cut(s) 1298
NdeI CATATG 2 cut(s) 329, 1333
NdeII GATC 1 cut(s) 80
NheI GCTAGC 1 cut(s) 1472
NlaIV GGNNCC 4 cut(s) 538, 697, 1023, 1299
NmuCI GTSAC 1 cut(s) 336
NsbI TGCGCA 1 cut(s) 1210
NspI RCATGY 2 cut(s) 510, 1209
NspV TTCGAA 1 cut(s) 1222
PaeI GCATGC 1 cut(s) 1209
PceI AGGCCT 2 cut(s) 757, 1425
PciI ACATGT 1 cut(s) 506
PctI GAATGC 2 cut(s) 829, 848
PfeI GAWTC 9 cut(s) 86, 131, 270, 324, 392, 398, 817, 877, 999
PflMI CCANNNNNTGG 1 cut(s) 678
PfoI TCCNGGA 1 cut(s) 215
PkrI GCNGC 6 cut(s) 7, 157, 357, 1267, 1456, 1459
PleI GAGTC 2 cut(s) 220, 1092
PluTI GGCGCC 1 cut(s) 1301
PpsI GAGTC 2 cut(s) 220, 1092
PscI ACATGT 1 cut(s) 506
PshBI ATTAAT 1 cut(s) 1046
Psp124BI GAGCTC 1 cut(s) 180
Psp6I CCWGG 2 cut(s) 215, 618
PspFI CCCAGC 1 cut(s) 1093
PspGI CCWGG 2 cut(s) 215, 618
PspN4I GGNNCC 4 cut(s) 538, 697, 1023, 1299
PstNI CAGNNNCTG 1 cut(s) 89
PvuII CAGCTG 2 cut(s) 155, 500
RsaI GTAC 6 cut(s) 381, 505, 721, 1023, 1110, 1135
RsaNI GTAC 6 cut(s) 380, 504, 720, 1022, 1109, 1134
RseI CAYNNNNRTG 4 cut(s) 349, 632, 1071, 1403
SacI GAGCTC 1 cut(s) 180
SaqAI TTAA 3 cut(s) 902, 1046, 1515
SatI GCNGC 6 cut(s) 6, 156, 356, 1266, 1455, 1458
Sau3AI GATC 1 cut(s) 80
SchI GAGTC 2 cut(s) 221, 1092
ScrFI CCNGG 2 cut(s) 217, 620
SduI GDGCHC 3 cut(s) 180, 736, 1441
SfaNI GCATC 4 cut(s) 181, 577, 843, 1407
SfcI CTRYAG 3 cut(s) 708, 990, 1147
SfoI GGCGCC 1 cut(s) 1299
SfuI TTCGAA 1 cut(s) 1222
SmiMI CAYNNNNRTG 4 cut(s) 349, 632, 1071, 1403
SmlI CTYRAG 2 cut(s) 93, 872
SmoI CTYRAG 2 cut(s) 93, 872
SphI GCATGC 1 cut(s) 1209
SseBI AGGCCT 2 cut(s) 757, 1425
SsiI CCGC 2 cut(s) 171, 813
SspDI GGCGCC 1 cut(s) 1297
SspMI CTAG 5 cut(s) 458, 476, 1172, 1188, 1473
SstI GAGCTC 1 cut(s) 180
StuI AGGCCT 2 cut(s) 757, 1425
StyD4I CCNGG 2 cut(s) 215, 618
TaaI ACNGT 3 cut(s) 562, 584, 949
TaiI ACGT 2 cut(s) 467, 1407
TaqI TCGA 4 cut(s) 1031, 1058, 1164, 1222
TaqII GACCGA 1 cut(s) 437
TatI WGTACW 4 cut(s) 379, 719, 1108, 1133
TfiI GAWTC 9 cut(s) 86, 131, 270, 324, 392, 398, 817, 877, 999
Tru1I TTAA 3 cut(s) 902, 1046, 1515
Tru9I TTAA 3 cut(s) 902, 1046, 1515
TscAI CASTG 1 cut(s) 1332
TseFI GTSAC 1 cut(s) 336
TseI GCWGC 6 cut(s) 5, 155, 355, 1265, 1454, 1457
Tsp45I GTSAC 1 cut(s) 336
TspDTI ATGAA 5 cut(s) 541, 616, 759, 1017, 1475
TspGWI ACGGA 1 cut(s) 1223
TspRI CASTG 1 cut(s) 1332
Van91I CCANNNNNTGG 1 cut(s) 678
VspI ATTAAT 1 cut(s) 1046
XapI RAATTY 1 cut(s) 1061
XceI RCATGY 2 cut(s) 510, 1209
XcmI CCANNNNNNNNNTGG 2 cut(s) 192, 1350
XspI CTAG 5 cut(s) 458, 476, 1172, 1188, 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.